MD14G1192300.v1.1

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
28319401 .. 28322553
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1192300.v1.1.491

Sequence Viewer

Length: 1086 bp
ATGGGGGTGGACTACTACAACATACTGAAAGTCAATCGGAACGCGAGCGAGGATGACCTGAAGAAGGCGTATAAGAGGCTGGCCATGATTTGGCACCCGGACAAGAACCCCGCCGGAAAGAGGCCGGAGGCGGAGGCCAAGTTCAAGCAAATATCCGAGGCCTTCGACGTCCTCAGTGACCCCGCCAAGCGCCAGATCTACGACCTTTACGGCGAGGAGGCCTTGAAATCGGGGCAATTTCCGCCTCCCTCGTCTTCCTCCTCCGCTCGCTCCTCCTCCGCCGCGGGCCACCACTACTACGCCAACCACAACAATCACCACCAGCGCCACGCGCACCCGAATACGTCGTCGTTCAGGTTCAATCCCAGGGACGCCGATGACATTTACGCCGAGATTTTTGGATCCGACGGTGGAGGTGGTGGGGGTGGTGGCGGAGGGAGGTATAGAGACGGGTTCTTTAGGATGCCCAATGGGGGTGGGCCGGAGTTTGTGGGTACCAGTAGCGGTGGTGGGGCTGCCCCTCAGAGGAAGGCCAATGCGGTCGAGAATTTGTTGCCGTGCAGCTTGGAGGAGCTCTATAAGGGTGTCAAGAAGAAGATGAAGATTTCCAGAAACATCTACGGCGCCGTTAGTGCTGGTAAGGTTTGGACTGTGGAGGAGATTTTAACTATTGAGATCAGACCGGGTTGGAAGAAGGGCACAAAGATCACCTTCCCTGAGAAGGGTAACCAAGAGCTAGGAGTGATTCCGGCAGATCTAATTTTTGTGGTAGACGAGAAACCACATGCACTTTACAAGAGGGACGGTAATGATCTGGTGGTCAACCAGGAGATAACACTGCTGGAGGCACTCACCGGCAAGACTCTTGACCTAACCACGCTAGACGGAAGGAATCTCATGATCCCGTTGACTGATATCATCAAACCTGGAGTTGAGATGGTGGTACCGAATGAGGGAATGCCGATCTCAAAAGAACCTGGAAAAAAGGGAAATTTGAGAATCAAGTTTGATGTCAAGTATCCTTCAAGGCTTACCACAGAACAGAAATCCGATCTGAAAAGAGTTCTGGGAGGAGTTTCATCATGA

Protein Analysis

362

Amino Acids

39.55

Weight (kDa)

9.14

Isoelectric Point (pI)

49.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 68 2.2e-25 DnaJ domain
DnaJ_C PF01556 185 - 341 4.7e-39 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
Acc65I GGTACC 2 cut(s) 494, 943
AccB1I GGYRCC 4 cut(s) 93, 494, 623, 943
AccB7I CCANNNNNTGG 1 cut(s) 90
AccBSI CCGCTC 1 cut(s) 266
AccI GTMKAC 1 cut(s) 771
AccII CGCG 3 cut(s) 44, 284, 332
AclWI GGATC 3 cut(s) 396, 409, 895
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 2 cut(s) 547, 991
AcuI CTGAAG 1 cut(s) 80
AcyI GRCGYC 3 cut(s) 168, 372, 624
AfaI GTAC 2 cut(s) 496, 945
AfiI CCNNNNNNNGG 8 cut(s) 64, 90, 120, 473, 525, 721, 722, 953
AgsI TTSAA 4 cut(s) 145, 226, 361, 1026
AjnI CCWGG 4 cut(s) 365, 825, 925, 976
AloI GAACNNNNNNTCC 2 cut(s) 125, 157
AluBI AGCT 3 cut(s) 564, 574, 736
AluI AGCT 3 cut(s) 564, 574, 736
Alw21I GWGCWC 1 cut(s) 576
Alw26I GTCTC 1 cut(s) 441
AlwI GGATC 3 cut(s) 396, 409, 895
AoxI GGCC 8 cut(s) 81, 122, 135, 159, 219, 286, 479, 531
ApeKI GCWGC 2 cut(s) 515, 561
ApoI RAATTY 2 cut(s) 547, 991
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
Asp718I GGTACC 2 cut(s) 494, 943
AspLEI GCGC 4 cut(s) 192, 327, 334, 626
AspS9I GGNCC 2 cut(s) 286, 479
AsuC2I CCSGG 2 cut(s) 98, 684
AsuHPI GGTGA 3 cut(s) 308, 700, 844
BaeGI GKGCMC 1 cut(s) 701
BalI TGGCCA 1 cut(s) 83
BamHI GGATCC 1 cut(s) 401
BanI GGYRCC 4 cut(s) 93, 494, 623, 943
BanII GRGCYC 1 cut(s) 576
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 576
BbvI GCAGC 2 cut(s) 502, 573
BccI CCATC 1 cut(s) 931
BceAI ACGGC 4 cut(s) 226, 541, 611, 637
BciT130I CCWGG 4 cut(s) 367, 827, 927, 978
BciVI GTATCC 1 cut(s) 1029
BcnI CCSGG 2 cut(s) 98, 684
BcoDI GTCTC 1 cut(s) 441
BfaI CTAG 2 cut(s) 737, 881
BfoI RGCGCY 3 cut(s) 193, 328, 627
BfuI GTATCC 1 cut(s) 1029
BglII AGATCT 2 cut(s) 195, 754
BisI GCNGC 3 cut(s) 282, 516, 562
BlsI GCNGC 3 cut(s) 283, 517, 563
Bme1390I CCNGG 6 cut(s) 98, 367, 684, 827, 927, 978
BmgT120I GGNCC 2 cut(s) 286, 479
BmiI GGNNCC 5 cut(s) 95, 403, 496, 625, 945
BmrFI CCNGG 6 cut(s) 98, 367, 684, 827, 927, 978
BmsI GCATC 1 cut(s) 453
BpiI GAAGAC 1 cut(s) 246
BpmI CTGGAG 2 cut(s) 863, 948
BpuMI CCSGG 2 cut(s) 98, 684
BsaHI GRCGYC 3 cut(s) 168, 372, 624
BsaJI CCNNGG 4 cut(s) 156, 282, 365, 366
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 90, 120, 473, 525, 721, 722, 953
Bse118I RCCGGY 1 cut(s) 854
Bse1I ACTGG 1 cut(s) 498
BseBI CCWGG 4 cut(s) 367, 827, 927, 978
BseDI CCNNGG 4 cut(s) 156, 282, 365, 366
BseGI GGATG 2 cut(s) 58, 468
BseLI CCNNNNNNNGG 8 cut(s) 64, 90, 120, 473, 525, 721, 722, 953
BseMII CTCAG 3 cut(s) 187, 536, 708
BseNI ACTGG 1 cut(s) 498
BseRI GAGGAG 7 cut(s) 230, 250, 262, 265, 584, 671, 1086
BseSI GKGCMC 1 cut(s) 701
BseXI GCAGC 2 cut(s) 502, 573
BsgI GTGCAG 1 cut(s) 580
Bsh1236I CGCG 3 cut(s) 44, 284, 332
Bsh1285I CGRYCG 1 cut(s) 543
BshFI GGCC 8 cut(s) 83, 124, 137, 161, 221, 288, 481, 533
BshNI GGYRCC 4 cut(s) 93, 494, 623, 943
BsiEI CGRYCG 1 cut(s) 543
BsiHKAI GWGCWC 1 cut(s) 576
BsiSI CCGG 7 cut(s) 98, 114, 125, 482, 683, 749, 855
BslFI GGGAC 2 cut(s) 383, 815
BslI CCNNNNNNNGG 8 cut(s) 64, 90, 120, 473, 525, 721, 722, 953
BsmAI GTCTC 1 cut(s) 441
BsmBI CGTCTC 1 cut(s) 441
BsmFI GGGAC 2 cut(s) 383, 815
BsmI GAATGC 1 cut(s) 963
BsnI GGCC 8 cut(s) 83, 124, 137, 161, 221, 288, 481, 533
Bsp1286I GDGCHC 2 cut(s) 576, 701
Bsp143I GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
BspANI GGCC 8 cut(s) 83, 124, 137, 161, 221, 288, 481, 533
BspCNI CTCAG 3 cut(s) 186, 535, 709
BspFNI CGCG 3 cut(s) 44, 284, 332
BspHI TCATGA 2 cut(s) 897, 1082
BspLI GGNNCC 5 cut(s) 95, 403, 496, 625, 945
BspPI GGATC 3 cut(s) 396, 409, 895
BspT107I GGYRCC 4 cut(s) 93, 494, 623, 943
BsrBI CCGCTC 1 cut(s) 266
BsrFI RCCGGY 1 cut(s) 854
BsrI ACTGG 1 cut(s) 498
BssAI RCCGGY 1 cut(s) 854
BssECI CCNNGG 4 cut(s) 156, 282, 365, 366
BssMI GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
BssNI GRCGYC 3 cut(s) 168, 372, 624
Bst2UI CCWGG 4 cut(s) 367, 827, 927, 978
Bst4CI ACNGT 3 cut(s) 410, 652, 806
BstACI GRCGYC 3 cut(s) 168, 372, 624
BstC8I GCNNGC 4 cut(s) 46, 81, 268, 286
BstDEI CTNAG 3 cut(s) 173, 522, 717
BstDSI CCRYGG 1 cut(s) 282
BstEII GGTNACC 1 cut(s) 725
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 2 cut(s) 58, 468
BstFNI CGCG 3 cut(s) 44, 284, 332
BstH2I RGCGCY 3 cut(s) 193, 328, 627
BstHHI GCGC 4 cut(s) 192, 327, 334, 626
BstKTI GATC 9 cut(s) 198, 404, 678, 708, 757, 814, 903, 966, 1054
BstMAI GTCTC 1 cut(s) 441
BstMBI GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
BstMCI CGRYCG 1 cut(s) 543
BstMWI GCNNNNNNNGC 3 cut(s) 241, 331, 632
BstNI CCWGG 4 cut(s) 367, 827, 927, 978
BstNSI RCATGY 1 cut(s) 788
BstPI GGTNACC 1 cut(s) 725
BstSCI CCNGG 6 cut(s) 96, 365, 682, 825, 925, 976
BstSLI GKGCMC 1 cut(s) 701
BstUI CGCG 3 cut(s) 44, 284, 332
BstV1I GCAGC 2 cut(s) 502, 573
BstV2I GAAGAC 1 cut(s) 246
BstX2I RGATCY 3 cut(s) 195, 401, 754
BstYI RGATCY 3 cut(s) 195, 401, 754
BsuI GTATCC 1 cut(s) 1029
BsuRI GGCC 8 cut(s) 83, 124, 137, 161, 221, 288, 481, 533
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 58, 468
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 2 cut(s) 181, 836
Cac8I GCNNGC 4 cut(s) 46, 81, 268, 286
CciI TCATGA 2 cut(s) 897, 1082
CfoI GCGC 4 cut(s) 192, 327, 334, 626
Cfr10I RCCGGY 1 cut(s) 854
Cfr13I GGNCC 2 cut(s) 286, 479
Cfr42I CCGCGG 1 cut(s) 285
CseI GACGC 1 cut(s) 380
Csp6I GTAC 2 cut(s) 495, 944
CspCI CAANNNNNGTGG 2 cut(s) 457, 492
CviAII CATG 4 cut(s) 85, 785, 898, 1083
CviQI GTAC 2 cut(s) 495, 944
DdeI CTNAG 3 cut(s) 173, 522, 717
DinI GGCGCC 1 cut(s) 625
DpnI GATC 9 cut(s) 197, 403, 677, 707, 756, 813, 902, 965, 1053
DpnII GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
EaeI YGGCCR 1 cut(s) 81
EciI GGCGGA 4 cut(s) 146, 231, 268, 447
Ecl136II GAGCTC 1 cut(s) 574
Eco147I AGGCCT 2 cut(s) 161, 221
Eco24I GRGCYC 1 cut(s) 576
Eco32I GATATC 1 cut(s) 916
Eco53kI GAGCTC 1 cut(s) 574
Eco57I CTGAAG 1 cut(s) 80
Eco91I GGTNACC 1 cut(s) 725
EcoICRI GAGCTC 1 cut(s) 574
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO65I GGTNACC 1 cut(s) 725
EcoRII CCWGG 4 cut(s) 365, 825, 925, 976
EcoRV GATATC 1 cut(s) 916
EcoT38I GRGCYC 1 cut(s) 576
EgeI GGCGCC 1 cut(s) 625
EheI GGCGCC 1 cut(s) 625
Esp3I CGTCTC 1 cut(s) 441
FaeI CATG 4 cut(s) 88, 788, 901, 1086
FaiI YATR 8 cut(s) 23, 72, 86, 444, 579, 786, 899, 1084
FalI AAGNNNNNCTT 2 cut(s) 695, 727
FaqI GGGAC 2 cut(s) 383, 815
FatI CATG 4 cut(s) 84, 784, 897, 1082
FauI CCCGC 3 cut(s) 118, 190, 277
FblI GTMKAC 1 cut(s) 771
Fnu4HI GCNGC 3 cut(s) 282, 516, 562
FokI GGATG 2 cut(s) 65, 475
FriOI GRGCYC 1 cut(s) 576
Fsp4HI GCNGC 3 cut(s) 282, 516, 562
FspBI CTAG 2 cut(s) 737, 881
GlaI GCGC 4 cut(s) 191, 326, 333, 625
GluI GCNGC 3 cut(s) 282, 516, 562
GsuI CTGGAG 2 cut(s) 863, 948
HaeII RGCGCY 3 cut(s) 193, 328, 627
HaeIII GGCC 8 cut(s) 83, 124, 137, 161, 221, 288, 481, 533
HapII CCGG 7 cut(s) 98, 114, 125, 482, 683, 749, 855
HgaI GACGC 1 cut(s) 380
HhaI GCGC 4 cut(s) 192, 327, 334, 626
Hin1I GRCGYC 3 cut(s) 168, 372, 624
Hin1II CATG 4 cut(s) 88, 788, 901, 1086
Hin6I GCGC 4 cut(s) 190, 325, 332, 624
HinP1I GCGC 4 cut(s) 190, 325, 332, 624
HincII GTYRAC 2 cut(s) 823, 909
HindII GTYRAC 2 cut(s) 823, 909
HinfI GANTC 4 cut(s) 745, 862, 892, 999
HpaII CCGG 7 cut(s) 98, 114, 125, 482, 683, 749, 855
HphI GGTGA 3 cut(s) 308, 700, 844
Hpy166II GTNNAC 4 cut(s) 10, 772, 823, 909
Hpy188I TCNGA 7 cut(s) 39, 157, 406, 525, 680, 1051, 1056
Hpy188III TCNNGA 6 cut(s) 544, 589, 609, 866, 898, 1083
Hpy8I GTNNAC 4 cut(s) 10, 772, 823, 909
Hpy99I CGWCG 4 cut(s) 170, 349, 352, 410
HpyAV CCTTC 8 cut(s) 58, 172, 523, 688, 715, 721, 882, 1032
HpyCH4III ACNGT 3 cut(s) 410, 652, 806
HpyCH4IV ACGT 2 cut(s) 168, 344
HpyCH4V TGCA 2 cut(s) 561, 788
HpyF10VI GCNNNNNNNGC 3 cut(s) 241, 331, 632
HpyF3I CTNAG 3 cut(s) 173, 522, 717
HpySE526I ACGT 2 cut(s) 168, 344
Hsp92I GRCGYC 3 cut(s) 168, 372, 624
Hsp92II CATG 4 cut(s) 88, 788, 901, 1086
HspAI GCGC 4 cut(s) 190, 325, 332, 624
KasI GGCGCC 1 cut(s) 623
KpnI GGTACC 2 cut(s) 498, 947
KspI CCGCGG 1 cut(s) 285
Kzo9I GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
LmnI GCTCC 2 cut(s) 275, 571
Lsp1109I GCAGC 2 cut(s) 502, 573
LweI GCATC 1 cut(s) 453
MaeI CTAG 2 cut(s) 737, 881
MaeII ACGT 2 cut(s) 168, 344
MaeIII GTNAC 2 cut(s) 176, 725
MalI GATC 9 cut(s) 197, 403, 677, 707, 756, 813, 902, 965, 1053
MbiI CCGCTC 1 cut(s) 266
MboI GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
MboII GAAGA 6 cut(s) 73, 246, 604, 607, 613, 703
MflI RGATCY 3 cut(s) 195, 401, 754
MhlI GDGCHC 2 cut(s) 576, 701
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 4 cut(s) 236, 547, 759, 991
MluNI TGGCCA 1 cut(s) 83
Mly113I GGCGCC 1 cut(s) 624
MlyI GAGTC 1 cut(s) 856
MmeI TCCRAC 2 cut(s) 429, 668
Mox20I TGGCCA 1 cut(s) 83
MscI TGGCCA 1 cut(s) 83
MseI TTAA 1 cut(s) 665
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 7 cut(s) 98, 114, 125, 482, 683, 749, 855
MspR9I CCNGG 6 cut(s) 98, 367, 684, 827, 927, 978
Mva1269I GAATGC 1 cut(s) 963
MvaI CCWGG 4 cut(s) 367, 827, 927, 978
MvnI CGCG 3 cut(s) 44, 284, 332
MwoI GCNNNNNNNGC 3 cut(s) 241, 331, 632
NarI GGCGCC 1 cut(s) 624
NciI CCSGG 2 cut(s) 98, 684
NdeII GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
NlaIII CATG 4 cut(s) 88, 788, 901, 1086
NlaIV GGNNCC 5 cut(s) 95, 403, 496, 625, 945
NmeAIII GCCGAG 1 cut(s) 415
NmuCI GTSAC 1 cut(s) 176
NspI RCATGY 1 cut(s) 788
PagI TCATGA 2 cut(s) 897, 1082
PasI CCCWGGG 1 cut(s) 366
PceI AGGCCT 2 cut(s) 161, 221
PctI GAATGC 1 cut(s) 963
PfeI GAWTC 3 cut(s) 745, 892, 999
PflMI CCANNNNNTGG 1 cut(s) 90
PkrI GCNGC 3 cut(s) 283, 517, 563
PleI GAGTC 1 cut(s) 856
PluTI GGCGCC 1 cut(s) 627
PpsI GAGTC 1 cut(s) 856
Psp124BI GAGCTC 1 cut(s) 576
Psp6I CCWGG 4 cut(s) 365, 825, 925, 976
PspEI GGTNACC 1 cut(s) 725
PspGI CCWGG 4 cut(s) 365, 825, 925, 976
PspN4I GGNNCC 5 cut(s) 95, 403, 496, 625, 945
PspPI GGNCC 2 cut(s) 286, 479
PsuI RGATCY 3 cut(s) 195, 401, 754
RsaI GTAC 2 cut(s) 496, 945
RsaNI GTAC 2 cut(s) 495, 944
SacI GAGCTC 1 cut(s) 576
SacII CCGCGG 1 cut(s) 285
SaqAI TTAA 1 cut(s) 665
SatI GCNGC 3 cut(s) 282, 516, 562
Sau3AI GATC 9 cut(s) 195, 401, 675, 705, 754, 811, 900, 963, 1051
Sau96I GGNCC 2 cut(s) 286, 479
SchI GAGTC 1 cut(s) 856
ScrFI CCNGG 6 cut(s) 98, 367, 684, 827, 927, 978
SduI GDGCHC 2 cut(s) 576, 701
SfaNI GCATC 1 cut(s) 453
SfoI GGCGCC 1 cut(s) 625
Sfr303I CCGCGG 1 cut(s) 285
SgrBI CCGCGG 1 cut(s) 285
Sse9I AATT 4 cut(s) 236, 547, 759, 991
SseBI AGGCCT 2 cut(s) 161, 221
SspDI GGCGCC 1 cut(s) 623
SspMI CTAG 2 cut(s) 737, 881
SstI GAGCTC 1 cut(s) 576
StuI AGGCCT 2 cut(s) 161, 221
StyD4I CCNGG 6 cut(s) 96, 365, 682, 825, 925, 976
TaaI ACNGT 3 cut(s) 410, 652, 806
TaiI ACGT 2 cut(s) 171, 347
TaqI TCGA 2 cut(s) 165, 543
TasI AATT 4 cut(s) 236, 547, 759, 991
TauI GCSGC 1 cut(s) 284
TfiI GAWTC 3 cut(s) 745, 892, 999
Tru1I TTAA 1 cut(s) 665
Tru9I TTAA 1 cut(s) 665
TscAI CASTG 2 cut(s) 181, 843
TseFI GTSAC 1 cut(s) 176
TseI GCWGC 2 cut(s) 515, 561
Tsp45I GTSAC 1 cut(s) 176
TspDTI ATGAA 2 cut(s) 614, 1068
TspGWI ACGGA 1 cut(s) 900
TspRI CASTG 2 cut(s) 181, 843
Van91I CCANNNNNTGG 1 cut(s) 90
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 2 cut(s) 547, 991
XceI RCATGY 1 cut(s) 788
XmiI GTMKAC 1 cut(s) 771
XspI CTAG 2 cut(s) 737, 881
ZraI GACGTC 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.