Prupe.5G184900_v2.0.a1

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15353824 .. 15357182
3359 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G184900.1

Sequence Viewer

Length: 1077 bp
ATGGGGGTGGACTATTACAACATACTGAAAGTGAATCGGAATGCGACGGACGATGACCTGAAGAAGGCGTACAAGCGGCTGGCGATGATTTGGCACCCGGACAAGAACCCGGCCGGGAAGCGACCTGAGGCCGAGGCCAAGTTCAAGCAAATCTCCGAGGCCTACGACGTCCTCAGCGACCCGGCCAAGCGCCAGATCTACGACCTCTACGGTGAGGAGGCTTTGAAATCGGGCCAATTCCCCCCGCCCTCTTCTTCCTCCTCGTCTCGCTCCGGCGCTGGGCCCCACTACTACACCAGCCACGTGCACCACCACCAGCGCCACCCAAACGCCTCCACCTTCAGGTTCAATCCCAGGGACGCTGAGGATATTTATGCCGAGATTTTTGGATCGGACGGCGGCGGCGGCGGTGTTGGTAGCGGTGGCGGGAGGGGGTATAGGGATGGATTCTTTAGGACGTCCAATGGTGGTGGGCCAGAGTTTGCGGGACCCAGTGGTAGTGGGCCTGGGCCTGGGAGGAAGGCCAATGCGGTTGAGAATTTGTTGCCTTGCAGCTTGGAGGAGCTCTATAAGGGGGTCAAGAAGAAGATGAAGATTTCCAGAAACATCTACGATGCTGTTGGTGCTGGTAAGGTTCGGACTGTTGAAGAGATATTGACCATCGAGATCAGACCTGGTTGGAAGAAGGGCACAAAGATCACCTTCCCGGAGAAGGGTAACCAGGAGCCTAATGTCATTCCGGCAGATCTCATTTTTGTGGTAGACGAGAAACCACATGCACTTTATAAGAGGGATGGTAATGATCTGGTGGTCAATCAGGAGATAACACTGTTGGAGGCACTTACTGGCAAGACTCTTGACCTAACCACCCTAGACGGAAGGAATCTCATGATCCCGTTAACTGATATCATCAAACCTGGAGGCGAGATGGTTGTACCAAATGAGGGGATGCCAATCTCAAAAGAACCTGGGAAAAAGGGAAACTTGAGAATCAAGTTTGATGTCAAGTATCCTTCACGACTCACCACAGAACAAAAGTCTGATCTGAAAAGAGTTCTGGGAGGAGTTTCATTATGA

Protein Analysis

359

Amino Acids

39.18

Weight (kDa)

9.13

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AatII GACGTC 2 cut(s) 171, 461
AccB1I GGYRCC 1 cut(s) 93
AccI GTMKAC 1 cut(s) 762
AclWI GGATC 2 cut(s) 397, 886
AcoI YGGCCR 2 cut(s) 111, 183
AcsI RAATTY 1 cut(s) 538
AcuI CTGAAG 2 cut(s) 80, 325
AcvI CACGTG 1 cut(s) 304
AcyI GRCGYC 2 cut(s) 168, 458
AfaI GTAC 2 cut(s) 71, 936
AfiI CCNNNNNNNGG 7 cut(s) 64, 279, 342, 512, 712, 713, 944
AgsI TTSAA 4 cut(s) 145, 226, 349, 647
AjnI CCWGG 7 cut(s) 353, 505, 511, 673, 720, 916, 967
AluBI AGCT 2 cut(s) 555, 565
AluI AGCT 2 cut(s) 555, 565
Alw21I GWGCWC 2 cut(s) 309, 567
Alw26I GTCTC 1 cut(s) 270
Alw44I GTGCAC 1 cut(s) 305
AlwI GGATC 2 cut(s) 397, 886
ApaI GGGCCC 1 cut(s) 285
ApaLI GTGCAC 1 cut(s) 305
ApeKI GCWGC 1 cut(s) 552
ApoI RAATTY 1 cut(s) 538
AspLEI GCGC 3 cut(s) 192, 278, 321
AspS9I GGNCC 7 cut(s) 232, 281, 282, 473, 488, 503, 509
AsuC2I CCSGG 5 cut(s) 98, 110, 115, 182, 707
AsuHPI GGTGA 3 cut(s) 224, 691, 1015
AvaII GGWCC 1 cut(s) 488
AxyI CCTNAGG 1 cut(s) 126
BaeGI GKGCMC 3 cut(s) 285, 309, 692
BanI GGYRCC 1 cut(s) 93
BanII GRGCYC 2 cut(s) 285, 567
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
BbrPI CACGTG 1 cut(s) 304
Bbv12I GWGCWC 2 cut(s) 309, 567
BbvCI CCTCAGC 2 cut(s) 173, 363
BbvI GCAGC 1 cut(s) 564
BccI CCATC 4 cut(s) 437, 668, 788, 922
BceAI ACGGC 1 cut(s) 412
BciT130I CCWGG 7 cut(s) 355, 507, 513, 675, 722, 918, 969
BciVI GTATCC 1 cut(s) 1020
BcnI CCSGG 5 cut(s) 98, 110, 115, 182, 707
BcoDI GTCTC 1 cut(s) 270
BfaI CTAG 1 cut(s) 872
BfoI RGCGCY 3 cut(s) 193, 279, 322
BfuI GTATCC 1 cut(s) 1020
BglII AGATCT 2 cut(s) 195, 745
BisI GCNGC 5 cut(s) 77, 400, 403, 406, 553
BlsI GCNGC 5 cut(s) 78, 401, 404, 407, 554
Bme18I GGWCC 1 cut(s) 488
BmgT120I GGNCC 7 cut(s) 232, 281, 282, 473, 488, 503, 509
BmiI GGNNCC 6 cut(s) 95, 283, 284, 489, 490, 726
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 2 cut(s) 604, 939
BmuI ACTGGG 1 cut(s) 486
BpmI CTGGAG 1 cut(s) 939
Bpu10I CCTNAGC 2 cut(s) 173, 363
BpuEI CTTGAG 1 cut(s) 1006
BpuMI CCSGG 5 cut(s) 98, 110, 115, 182, 707
BsaAI YACGTR 1 cut(s) 304
BsaBI GATNNNNATC 1 cut(s) 953
BsaHI GRCGYC 2 cut(s) 168, 458
BsaJI CCNNGG 7 cut(s) 132, 156, 353, 354, 506, 512, 968
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 279, 342, 512, 712, 713, 944
Bse1I ACTGG 2 cut(s) 492, 850
Bse21I CCTNAGG 1 cut(s) 126
Bse8I GATNNNNATC 1 cut(s) 953
BseBI CCWGG 7 cut(s) 355, 507, 513, 675, 722, 918, 969
BseDI CCNNGG 7 cut(s) 132, 156, 353, 354, 506, 512, 968
BseGI GGATG 3 cut(s) 448, 799, 954
BseJI GATNNNNATC 1 cut(s) 953
BseLI CCNNNNNNNGG 7 cut(s) 64, 279, 342, 512, 712, 713, 944
BseMII CTCAG 3 cut(s) 117, 187, 354
BseNI ACTGG 2 cut(s) 492, 850
BseRI GAGGAG 4 cut(s) 230, 250, 575, 1077
BseSI GKGCMC 3 cut(s) 285, 309, 692
BseX3I CGGCCG 1 cut(s) 111
BseXI GCAGC 1 cut(s) 564
BseYI CCCAGC 1 cut(s) 278
Bsh1285I CGRYCG 1 cut(s) 114
BshNI GGYRCC 1 cut(s) 93
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 2 cut(s) 309, 567
BsiSI CCGG 7 cut(s) 98, 110, 114, 182, 273, 707, 740
BslFI GGGAC 2 cut(s) 371, 501
BslI CCNNNNNNNGG 7 cut(s) 64, 279, 342, 512, 712, 713, 944
BsmAI GTCTC 1 cut(s) 270
BsmBI CGTCTC 1 cut(s) 270
BsmFI GGGAC 2 cut(s) 371, 501
BsmI GAATGC 1 cut(s) 46
Bsp120I GGGCCC 1 cut(s) 281
Bsp1286I GDGCHC 4 cut(s) 285, 309, 567, 692
Bsp143I GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
BspCNI CTCAG 3 cut(s) 118, 186, 355
BspHI TCATGA 1 cut(s) 888
BspLI GGNNCC 6 cut(s) 95, 283, 284, 489, 490, 726
BspPI GGATC 2 cut(s) 397, 886
BspT107I GGYRCC 1 cut(s) 93
BsrI ACTGG 2 cut(s) 492, 850
BssECI CCNNGG 7 cut(s) 132, 156, 353, 354, 506, 512, 968
BssMI GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
BssNI GRCGYC 2 cut(s) 168, 458
Bst2UI CCWGG 7 cut(s) 355, 507, 513, 675, 722, 918, 969
Bst4CI ACNGT 3 cut(s) 212, 643, 831
Bst6I CTCTTC 2 cut(s) 256, 642
BstACI GRCGYC 2 cut(s) 168, 458
BstBAI YACGTR 1 cut(s) 304
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 3 cut(s) 126, 173, 363
BstEII GGTNACC 1 cut(s) 716
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 3 cut(s) 448, 799, 954
BstH2I RGCGCY 3 cut(s) 193, 279, 322
BstHHI GCGC 3 cut(s) 192, 278, 321
BstKTI GATC 8 cut(s) 198, 392, 669, 699, 748, 805, 894, 1045
BstMAI GTCTC 1 cut(s) 270
BstMBI GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 2 cut(s) 405, 623
BstNI CCWGG 7 cut(s) 355, 507, 513, 675, 722, 918, 969
BstNSI RCATGY 1 cut(s) 779
BstPI GGTNACC 1 cut(s) 716
BstSLI GKGCMC 3 cut(s) 285, 309, 692
BstV1I GCAGC 1 cut(s) 564
BstX2I RGATCY 2 cut(s) 195, 745
BstYI RGATCY 2 cut(s) 195, 745
BstZI CGGCCG 1 cut(s) 111
Bsu36I CCTNAGG 1 cut(s) 126
BsuI GTATCC 1 cut(s) 1020
BtgZI GCGATG 1 cut(s) 98
BtsCI GGATG 3 cut(s) 448, 799, 954
BtsIMutI CAGTG 2 cut(s) 499, 827
Cac8I GCNNGC 1 cut(s) 81
CciI TCATGA 1 cut(s) 888
CfoI GCGC 3 cut(s) 192, 278, 321
Cfr13I GGNCC 7 cut(s) 232, 281, 282, 473, 488, 503, 509
CseI GACGC 1 cut(s) 368
CsiI ACCWGGT 1 cut(s) 673
Csp6I GTAC 2 cut(s) 70, 935
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviAII CATG 2 cut(s) 776, 889
CviQI GTAC 2 cut(s) 70, 935
DdeI CTNAG 3 cut(s) 126, 173, 363
DpnI GATC 8 cut(s) 197, 391, 668, 698, 747, 804, 893, 1044
DpnII GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
EaeI YGGCCR 2 cut(s) 111, 183
EagI CGGCCG 1 cut(s) 111
Eam1104I CTCTTC 2 cut(s) 256, 642
EarI CTCTTC 2 cut(s) 256, 642
Ecl136II GAGCTC 1 cut(s) 565
EclXI CGGCCG 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 2 cut(s) 285, 567
Eco32I GATATC 1 cut(s) 907
Eco47I GGWCC 1 cut(s) 488
Eco52I CGGCCG 1 cut(s) 111
Eco53kI GAGCTC 1 cut(s) 565
Eco57I CTGAAG 2 cut(s) 80, 325
Eco72I CACGTG 1 cut(s) 304
Eco81I CCTNAGG 1 cut(s) 126
Eco91I GGTNACC 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 565
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 2 cut(s) 282, 488
EcoO65I GGTNACC 1 cut(s) 716
EcoRII CCWGG 7 cut(s) 353, 505, 511, 673, 720, 916, 967
EcoRV GATATC 1 cut(s) 907
EcoT38I GRGCYC 2 cut(s) 285, 567
Esp3I CGTCTC 1 cut(s) 270
FaeI CATG 2 cut(s) 779, 892
FaiI YATR 8 cut(s) 23, 375, 438, 570, 777, 786, 890, 1075
FalI AAGNNNNNCTT 4 cut(s) 686, 718, 968, 1000
FaqI GGGAC 2 cut(s) 371, 501
FatI CATG 2 cut(s) 775, 888
FauI CCCGC 3 cut(s) 252, 419, 478
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 5 cut(s) 77, 400, 403, 406, 553
FokI GGATG 3 cut(s) 455, 806, 961
FriOI GRGCYC 2 cut(s) 285, 567
Fsp4HI GCNGC 5 cut(s) 77, 400, 403, 406, 553
FspBI CTAG 1 cut(s) 872
GlaI GCGC 3 cut(s) 191, 277, 320
GluI GCNGC 5 cut(s) 77, 400, 403, 406, 553
GsaI CCCAGC 1 cut(s) 282
GsuI CTGGAG 1 cut(s) 939
HaeII RGCGCY 3 cut(s) 193, 279, 322
HapII CCGG 7 cut(s) 98, 110, 114, 182, 273, 707, 740
HgaI GACGC 1 cut(s) 368
HhaI GCGC 3 cut(s) 192, 278, 321
Hin1I GRCGYC 2 cut(s) 168, 458
Hin1II CATG 2 cut(s) 779, 892
Hin6I GCGC 3 cut(s) 190, 276, 319
HinP1I GCGC 3 cut(s) 190, 276, 319
HincII GTYRAC 1 cut(s) 900
HindII GTYRAC 1 cut(s) 900
HinfI GANTC 6 cut(s) 34, 447, 853, 883, 990, 1020
HpaI GTTAAC 1 cut(s) 900
HpaII CCGG 7 cut(s) 98, 110, 114, 182, 273, 707, 740
HphI GGTGA 3 cut(s) 224, 691, 1015
Hpy166II GTNNAC 4 cut(s) 10, 307, 763, 900
Hpy188I TCNGA 7 cut(s) 39, 157, 394, 639, 671, 1042, 1047
Hpy188III TCNNGA 7 cut(s) 580, 600, 664, 818, 857, 889, 1017
Hpy8I GTNNAC 4 cut(s) 10, 307, 763, 900
Hpy99I CGWCG 2 cut(s) 49, 170
HpyAV CCTTC 8 cut(s) 58, 349, 514, 679, 706, 712, 873, 1023
HpyCH4III ACNGT 3 cut(s) 212, 643, 831
HpyCH4IV ACGT 3 cut(s) 168, 303, 458
HpyCH4V TGCA 3 cut(s) 307, 552, 779
HpyF10VI GCNNNNNNNGC 2 cut(s) 405, 623
HpyF3I CTNAG 3 cut(s) 126, 173, 363
HpySE526I ACGT 3 cut(s) 168, 303, 458
Hsp92I GRCGYC 2 cut(s) 168, 458
Hsp92II CATG 2 cut(s) 779, 892
HspAI GCGC 3 cut(s) 190, 276, 319
KflI GGGWCCC 1 cut(s) 488
KspAI GTTAAC 1 cut(s) 900
Kzo9I GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
LmnI GCTCC 3 cut(s) 275, 562, 724
Lsp1109I GCAGC 1 cut(s) 564
LweI GCATC 2 cut(s) 604, 939
MabI ACCWGGT 1 cut(s) 673
MaeI CTAG 1 cut(s) 872
MaeII ACGT 3 cut(s) 168, 303, 458
MaeIII GTNAC 1 cut(s) 716
MalI GATC 8 cut(s) 197, 391, 668, 698, 747, 804, 893, 1044
MboI GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
MboII GAAGA 8 cut(s) 73, 243, 246, 595, 598, 604, 659, 694
MflI RGATCY 2 cut(s) 195, 745
MhlI GDGCHC 4 cut(s) 285, 309, 567, 692
MluCI AATT 2 cut(s) 236, 538
MlyI GAGTC 2 cut(s) 847, 1014
MmeI TCCRAC 2 cut(s) 659, 813
MseI TTAA 1 cut(s) 899
MslI CAYNNNNRTG 1 cut(s) 755
MspI CCGG 7 cut(s) 98, 110, 114, 182, 273, 707, 740
Mva1269I GAATGC 1 cut(s) 46
MvaI CCWGG 7 cut(s) 355, 507, 513, 675, 722, 918, 969
MwoI GCNNNNNNNGC 2 cut(s) 405, 623
NciI CCSGG 5 cut(s) 98, 110, 115, 182, 707
NdeII GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
NlaIII CATG 2 cut(s) 779, 892
NlaIV GGNNCC 6 cut(s) 95, 283, 284, 489, 490, 726
NmeAIII GCCGAG 2 cut(s) 157, 403
NspI RCATGY 1 cut(s) 779
PagI TCATGA 1 cut(s) 888
PasI CCCWGGG 1 cut(s) 354
PceI AGGCCT 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 46
PfeI GAWTC 4 cut(s) 34, 447, 883, 990
PfoI TCCNGGA 1 cut(s) 705
PkrI GCNGC 5 cut(s) 78, 401, 404, 407, 554
PleI GAGTC 2 cut(s) 847, 1014
PmaCI CACGTG 1 cut(s) 304
PmlI CACGTG 1 cut(s) 304
PpsI GAGTC 2 cut(s) 847, 1014
Ppu21I YACGTR 1 cut(s) 304
PpuMI RGGWCCY 1 cut(s) 488
PsiI TTATAA 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 567
Psp5II RGGWCCY 1 cut(s) 488
Psp6I CCWGG 7 cut(s) 353, 505, 511, 673, 720, 916, 967
PspCI CACGTG 1 cut(s) 304
PspEI GGTNACC 1 cut(s) 716
PspFI CCCAGC 1 cut(s) 278
PspGI CCWGG 7 cut(s) 353, 505, 511, 673, 720, 916, 967
PspN4I GGNNCC 6 cut(s) 95, 283, 284, 489, 490, 726
PspOMI GGGCCC 1 cut(s) 281
PspPI GGNCC 7 cut(s) 232, 281, 282, 473, 488, 503, 509
PspPPI RGGWCCY 1 cut(s) 488
PsuI RGATCY 2 cut(s) 195, 745
RsaI GTAC 2 cut(s) 71, 936
RsaNI GTAC 2 cut(s) 70, 935
RseI CAYNNNNRTG 1 cut(s) 755
SacI GAGCTC 1 cut(s) 567
SaqAI TTAA 1 cut(s) 899
SatI GCNGC 5 cut(s) 77, 400, 403, 406, 553
Sau3AI GATC 8 cut(s) 195, 389, 666, 696, 745, 802, 891, 1042
Sau96I GGNCC 7 cut(s) 232, 281, 282, 473, 488, 503, 509
SchI GAGTC 2 cut(s) 847, 1014
SduI GDGCHC 4 cut(s) 285, 309, 567, 692
SexAI ACCWGGT 1 cut(s) 673
SfaNI GCATC 2 cut(s) 604, 939
SinI GGWCC 1 cut(s) 488
SmiMI CAYNNNNRTG 1 cut(s) 755
SmlI CTYRAG 1 cut(s) 985
SmoI CTYRAG 1 cut(s) 985
Sse9I AATT 2 cut(s) 236, 538
SseBI AGGCCT 1 cut(s) 161
SspMI CTAG 1 cut(s) 872
SstI GAGCTC 1 cut(s) 567
StuI AGGCCT 1 cut(s) 161
TaaI ACNGT 3 cut(s) 212, 643, 831
TaiI ACGT 3 cut(s) 171, 306, 461
TaqI TCGA 1 cut(s) 663
TasI AATT 2 cut(s) 236, 538
TauI GCSGC 4 cut(s) 79, 402, 405, 408
TfiI GAWTC 4 cut(s) 34, 447, 883, 990
Tru1I TTAA 1 cut(s) 899
Tru9I TTAA 1 cut(s) 899
TscAI CASTG 2 cut(s) 499, 834
TseI GCWGC 1 cut(s) 552
TspDTI ATGAA 2 cut(s) 605, 1059
TspGWI ACGGA 2 cut(s) 62, 891
TspRI CASTG 2 cut(s) 499, 834
VneI GTGCAC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 488
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 1 cut(s) 538
XceI RCATGY 1 cut(s) 779
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 1 cut(s) 872
ZraI GACGTC 2 cut(s) 169, 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.