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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05180 AT5G05180 AT5G05180 |
| fragaria_vesca | FvH4_7g26161 FvH4_7g26161 FvH4_7g26161 FvH4_7g26161 FvH4_7g26161 |
| malus_domestica | MD00G1192700.v1.1 MD00G1193000.v1.1 MD00G1193100.v1.1 MD01G1170000.v1.1 MD07G1236000.v1.1 MD07G1236100.v1.1 MD07G1236300.v1.1 MD07G1236600.v1.1 MD07G1236900.v1.1 |
| prunus_persica | Prupe.2G266000_v2.0.a1 Prupe.2G266000_v2.0.a1 |
| pyrus_communis | pycom01g18270 pycom07g21320 |
| rosa_chinensis | RchiOBHm_Chr1g0372621 |
| rosa_laevigata | RLG00000026886 |
| rosa_roxburghii | Rroxscaffold_4G00284820 |
| rosa_rugosa | Rorug01G0373300 |
| rosa_samantha | Rh1AG381800 Rh1BG345200 Rh1CG358600 Rh1DG376400 |
| rosa_wichuraiana | Rw1G033570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1344 |
| Acc36I | ACCTGC | 1 cut(s) | 990 |
| AccI | GTMKAC | 1 cut(s) | 1128 |
| AccII | CGCG | 2 cut(s) | 909, 1311 |
| AciI | CCGC | 6 cut(s) | 346, 907, 1253, 1309, 1334, 1555 |
| AclI | AACGTT | 1 cut(s) | 179 |
| AclWI | GGATC | 5 cut(s) | 453, 466, 1377, 1390, 1495 |
| AcoI | YGGCCR | 2 cut(s) | 237, 904 |
| AcsI | RAATTY | 3 cut(s) | 212, 766, 792 |
| AcuI | CTGAAG | 4 cut(s) | 47, 566, 950, 1184 |
| AfeI | AGCGCT | 1 cut(s) | 517 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 601, 1575 |
| AflII | CTTAAG | 1 cut(s) | 740 |
| AflIII | ACRYGT | 1 cut(s) | 1192 |
| AjnI | CCWGG | 1 cut(s) | 594 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 214, 246 |
| Alw21I | GWGCWC | 3 cut(s) | 1269, 1530, 1554 |
| Alw26I | GTCTC | 1 cut(s) | 1027 |
| AlwI | GGATC | 5 cut(s) | 453, 466, 1377, 1390, 1495 |
| Aor51HI | AGCGCT | 1 cut(s) | 517 |
| AoxI | GGCC | 3 cut(s) | 109, 237, 904 |
| ApeKI | GCWGC | 8 cut(s) | 541, 643, 865, 925, 1007, 1438, 1507, 1579 |
| ApoI | RAATTY | 3 cut(s) | 212, 766, 792 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 204, 1116 |
| AspLEI | GCGC | 4 cut(s) | 431, 518, 806, 1584 |
| AspS9I | GGNCC | 1 cut(s) | 109 |
| AsuC2I | CCSGG | 3 cut(s) | 241, 485, 1570 |
| AsuHPI | GGTGA | 5 cut(s) | 164, 610, 931, 1459, 1510 |
| BaeGI | GKGCMC | 1 cut(s) | 1575 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 43, 76, 209, 242 |
| BamHI | GGATCC | 2 cut(s) | 458, 1382 |
| BanII | GRGCYC | 3 cut(s) | 1269, 1282, 1554 |
| BauI | CACGAG | 2 cut(s) | 1030, 1364 |
| BbsI | GAAGAC | 2 cut(s) | 432, 628 |
| Bbv12I | GWGCWC | 3 cut(s) | 1269, 1530, 1554 |
| BbvCI | CCTCAGC | 1 cut(s) | 1482 |
| BbvI | GCAGC | 8 cut(s) | 553, 630, 852, 937, 1019, 1450, 1519, 1591 |
| BccI | CCATC | 8 cut(s) | 100, 143, 389, 531, 703, 1096, 1129, 1243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1253, 1287 |
| BciT130I | CCWGG | 1 cut(s) | 596 |
| BciVI | GTATCC | 1 cut(s) | 1535 |
| BclI | TGATCA | 2 cut(s) | 138, 808 |
| BcnI | CCSGG | 3 cut(s) | 241, 485, 1570 |
| BcoDI | GTCTC | 1 cut(s) | 1027 |
| BfaI | CTAG | 4 cut(s) | 402, 1275, 1403, 1586 |
| BfmI | CTRYAG | 3 cut(s) | 866, 983, 1531 |
| BfoI | RGCGCY | 4 cut(s) | 432, 519, 807, 1585 |
| BfrI | CTTAAG | 1 cut(s) | 740 |
| BfuAI | ACCTGC | 1 cut(s) | 990 |
| BfuI | GTATCC | 1 cut(s) | 1535 |
| BisI | GCNGC | 9 cut(s) | 542, 644, 866, 907, 926, 1008, 1439, 1508, 1580 |
| BlpI | GCTNAGC | 1 cut(s) | 555 |
| BlsI | GCNGC | 9 cut(s) | 543, 645, 867, 908, 927, 1009, 1440, 1509, 1581 |
| Bme1390I | CCNGG | 4 cut(s) | 241, 485, 596, 1570 |
| BmgT120I | GGNCC | 1 cut(s) | 109 |
| BmiI | GGNNCC | 3 cut(s) | 460, 504, 1384 |
| BmrFI | CCNGG | 4 cut(s) | 241, 485, 596, 1570 |
| BmsI | GCATC | 3 cut(s) | 319, 686, 912 |
| BpiI | GAAGAC | 2 cut(s) | 432, 628 |
| BpmI | CTGGAG | 3 cut(s) | 51, 578, 1544 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1482 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 555 |
| BpuEI | CTTGAG | 2 cut(s) | 935, 989 |
| BpuMI | CCSGG | 3 cut(s) | 241, 485, 1570 |
| BsaJI | CCNNGG | 2 cut(s) | 304, 483 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 601, 1575 |
| Bse1I | ACTGG | 2 cut(s) | 240, 430 |
| Bse3DI | GCAATG | 4 cut(s) | 895, 938, 1091, 1139 |
| BseBI | CCWGG | 1 cut(s) | 596 |
| BseDI | CCNNGG | 2 cut(s) | 304, 483 |
| BseGI | GGATG | 2 cut(s) | 228, 542 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 601, 1575 |
| BseMI | GCAATG | 4 cut(s) | 895, 938, 1091, 1139 |
| BseMII | CTCAG | 3 cut(s) | 405, 546, 1473 |
| BseNI | ACTGG | 2 cut(s) | 240, 430 |
| BseRI | GAGGAG | 3 cut(s) | 303, 1445, 1499 |
| BseSI | GKGCMC | 1 cut(s) | 1575 |
| BseX3I | CGGCCG | 1 cut(s) | 904 |
| BseXI | GCAGC | 8 cut(s) | 553, 630, 852, 937, 1019, 1450, 1519, 1591 |
| BseYI | CCCAGC | 1 cut(s) | 44 |
| Bsh1236I | CGCG | 2 cut(s) | 909, 1311 |
| Bsh1285I | CGRYCG | 1 cut(s) | 907 |
| BshFI | GGCC | 3 cut(s) | 111, 239, 906 |
| BsiEI | CGRYCG | 1 cut(s) | 907 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1269, 1530, 1554 |
| BsiSI | CCGG | 5 cut(s) | 197, 240, 485, 1504, 1569 |
| BslFI | GGGAC | 1 cut(s) | 1350 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 601, 1575 |
| BsmAI | GTCTC | 1 cut(s) | 1027 |
| BsmFI | GGGAC | 1 cut(s) | 1350 |
| BsnI | GGCC | 3 cut(s) | 111, 239, 906 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1269, 1282, 1530, 1554, 1575 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 555 |
| BspACI | CCGC | 6 cut(s) | 346, 907, 1253, 1309, 1334, 1555 |
| BspANI | GGCC | 3 cut(s) | 111, 239, 906 |
| BspCNI | CTCAG | 3 cut(s) | 404, 547, 1474 |
| BspFNI | CGCG | 2 cut(s) | 909, 1311 |
| BspLI | GGNNCC | 3 cut(s) | 460, 504, 1384 |
| BspMAI | CTGCAG | 2 cut(s) | 870, 987 |
| BspMI | ACCTGC | 1 cut(s) | 990 |
| BspPI | GGATC | 5 cut(s) | 453, 466, 1377, 1390, 1495 |
| BspTI | CTTAAG | 1 cut(s) | 740 |
| BsrDI | GCAATG | 4 cut(s) | 895, 938, 1091, 1139 |
| BsrI | ACTGG | 2 cut(s) | 240, 430 |
| BssECI | CCNNGG | 2 cut(s) | 304, 483 |
| BssSI | CACGAG | 2 cut(s) | 1030, 1364 |
| BssT1I | CCWWGG | 1 cut(s) | 304 |
| Bst2BI | CACGAG | 2 cut(s) | 1030, 1364 |
| Bst2UI | CCWGG | 1 cut(s) | 596 |
| Bst4CI | ACNGT | 2 cut(s) | 74, 530 |
| Bst6I | CTCTTC | 3 cut(s) | 96, 451, 926 |
| BstAFI | CTTAAG | 1 cut(s) | 740 |
| BstC8I | GCNNGC | 1 cut(s) | 987 |
| BstDEI | CTNAG | 5 cut(s) | 386, 391, 555, 1343, 1482 |
| BstF5I | GGATG | 2 cut(s) | 228, 542 |
| BstFNI | CGCG | 2 cut(s) | 909, 1311 |
| BstH2I | RGCGCY | 4 cut(s) | 432, 519, 807, 1585 |
| BstHHI | GCGC | 4 cut(s) | 431, 518, 806, 1584 |
| BstMAI | GTCTC | 1 cut(s) | 1027 |
| BstMCI | CGRYCG | 1 cut(s) | 907 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 193, 1579 |
| BstNI | CCWGG | 1 cut(s) | 596 |
| BstNSI | RCATGY | 2 cut(s) | 1196, 1246 |
| BstSCI | CCNGG | 4 cut(s) | 239, 483, 594, 1568 |
| BstSFI | CTRYAG | 3 cut(s) | 866, 983, 1531 |
| BstSLI | GKGCMC | 1 cut(s) | 1575 |
| BstUI | CGCG | 2 cut(s) | 909, 1311 |
| BstV1I | GCAGC | 8 cut(s) | 553, 630, 852, 937, 1019, 1450, 1519, 1591 |
| BstV2I | GAAGAC | 2 cut(s) | 432, 628 |
| BstX2I | RGATCY | 2 cut(s) | 458, 1382 |
| BstYI | RGATCY | 2 cut(s) | 458, 1382 |
| BstZI | CGGCCG | 1 cut(s) | 904 |
| BsuI | GTATCC | 1 cut(s) | 1535 |
| BsuRI | GGCC | 3 cut(s) | 111, 239, 906 |
| BtsCI | GGATG | 2 cut(s) | 228, 542 |
| BtsIMutI | CAGTG | 1 cut(s) | 233 |
| BveI | ACCTGC | 1 cut(s) | 990 |
| Cac8I | GCNNGC | 1 cut(s) | 987 |
| CfoI | GCGC | 4 cut(s) | 431, 518, 806, 1584 |
| Cfr13I | GGNCC | 1 cut(s) | 109 |
| CviAII | CATG | 6 cut(s) | 338, 776, 1121, 1193, 1243, 1291 |
| DdeI | CTNAG | 5 cut(s) | 386, 391, 555, 1343, 1482 |
| DraI | TTTAAA | 2 cut(s) | 420, 1228 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1344 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1344 |
| EaeI | YGGCCR | 2 cut(s) | 237, 904 |
| EagI | CGGCCG | 1 cut(s) | 904 |
| Eam1104I | CTCTTC | 3 cut(s) | 96, 451, 926 |
| EarI | CTCTTC | 3 cut(s) | 96, 451, 926 |
| EciI | GGCGGA | 2 cut(s) | 1268, 1544 |
| Ecl136II | GAGCTC | 2 cut(s) | 1267, 1552 |
| EclXI | CGGCCG | 1 cut(s) | 904 |
| Eco130I | CCWWGG | 1 cut(s) | 304 |
| Eco24I | GRGCYC | 3 cut(s) | 1269, 1282, 1554 |
| Eco47III | AGCGCT | 1 cut(s) | 517 |
| Eco52I | CGGCCG | 1 cut(s) | 904 |
| Eco53kI | GAGCTC | 2 cut(s) | 1267, 1552 |
| Eco57I | CTGAAG | 4 cut(s) | 47, 566, 950, 1184 |
| EcoICRI | GAGCTC | 2 cut(s) | 1267, 1552 |
| EcoRII | CCWGG | 1 cut(s) | 594 |
| EcoT14I | CCWWGG | 1 cut(s) | 304 |
| EcoT38I | GRGCYC | 3 cut(s) | 1269, 1282, 1554 |
| ErhI | CCWWGG | 1 cut(s) | 304 |
| FaeI | CATG | 6 cut(s) | 341, 779, 1124, 1196, 1246, 1294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 723, 755 |
| FaqI | GGGAC | 1 cut(s) | 1350 |
| FatI | CATG | 6 cut(s) | 337, 775, 1120, 1192, 1242, 1290 |
| FauI | CCCGC | 2 cut(s) | 1316, 1327 |
| FbaI | TGATCA | 2 cut(s) | 138, 808 |
| FblI | GTMKAC | 1 cut(s) | 1128 |
| Fnu4HI | GCNGC | 9 cut(s) | 542, 644, 866, 907, 926, 1008, 1439, 1508, 1580 |
| FokI | GGATG | 2 cut(s) | 235, 549 |
| FriOI | GRGCYC | 3 cut(s) | 1269, 1282, 1554 |
| Fsp4HI | GCNGC | 9 cut(s) | 542, 644, 866, 907, 926, 1008, 1439, 1508, 1580 |
| FspBI | CTAG | 4 cut(s) | 402, 1275, 1403, 1586 |
| GlaI | GCGC | 4 cut(s) | 430, 517, 805, 1583 |
| GluI | GCNGC | 9 cut(s) | 542, 644, 866, 907, 926, 1008, 1439, 1508, 1580 |
| GsaI | CCCAGC | 1 cut(s) | 48 |
| GsuI | CTGGAG | 3 cut(s) | 51, 578, 1544 |
| HaeII | RGCGCY | 4 cut(s) | 432, 519, 807, 1585 |
| HaeIII | GGCC | 3 cut(s) | 111, 239, 906 |
| HapII | CCGG | 5 cut(s) | 197, 240, 485, 1504, 1569 |
| HhaI | GCGC | 4 cut(s) | 431, 518, 806, 1584 |
| Hin1II | CATG | 6 cut(s) | 341, 779, 1124, 1196, 1246, 1294 |
| Hin6I | GCGC | 4 cut(s) | 429, 516, 804, 1582 |
| HinP1I | GCGC | 4 cut(s) | 429, 516, 804, 1582 |
| HindIII | AAGCTT | 1 cut(s) | 851 |
| HpaII | CCGG | 5 cut(s) | 197, 240, 485, 1504, 1569 |
| HphI | GGTGA | 5 cut(s) | 164, 610, 931, 1459, 1510 |
| Hpy166II | GTNNAC | 4 cut(s) | 233, 407, 1129, 1566 |
| Hpy188III | TCNNGA | 7 cut(s) | 68, 98, 209, 326, 580, 914, 1325 |
| Hpy8I | GTNNAC | 4 cut(s) | 233, 407, 1129, 1566 |
| Hpy99I | CGWCG | 1 cut(s) | 359 |
| HpyAV | CCTTC | 2 cut(s) | 595, 1159 |
| HpyCH4III | ACNGT | 2 cut(s) | 74, 530 |
| HpyCH4IV | ACGT | 1 cut(s) | 179 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 193, 1579 |
| HpyF3I | CTNAG | 5 cut(s) | 386, 391, 555, 1343, 1482 |
| HpySE526I | ACGT | 1 cut(s) | 179 |
| Hsp92II | CATG | 6 cut(s) | 341, 779, 1124, 1196, 1246, 1294 |
| HspAI | GCGC | 4 cut(s) | 429, 516, 804, 1582 |
| Ksp22I | TGATCA | 2 cut(s) | 138, 808 |
| LmnI | GCTCC | 4 cut(s) | 597, 862, 1525, 1557 |
| Lsp1109I | GCAGC | 8 cut(s) | 553, 630, 852, 937, 1019, 1450, 1519, 1591 |
| LweI | GCATC | 3 cut(s) | 319, 686, 912 |
| MaeI | CTAG | 4 cut(s) | 402, 1275, 1403, 1586 |
| MaeII | ACGT | 1 cut(s) | 179 |
| MaeIII | GTNAC | 2 cut(s) | 724, 1238 |
| MflI | RGATCY | 2 cut(s) | 458, 1382 |
| MhlI | GDGCHC | 5 cut(s) | 1269, 1282, 1530, 1554, 1575 |
| MlyI | GAGTC | 5 cut(s) | 316, 473, 614, 833, 1029 |
| MmeI | TCCRAC | 4 cut(s) | 30, 378, 645, 1360 |
| MroXI | GAANNNNTTC | 2 cut(s) | 204, 1116 |
| MseI | TTAA | 4 cut(s) | 120, 419, 741, 1227 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1247 |
| MspA1I | CMGCKG | 3 cut(s) | 44, 544, 928 |
| MspCI | CTTAAG | 1 cut(s) | 740 |
| MspI | CCGG | 5 cut(s) | 197, 240, 485, 1504, 1569 |
| MspR9I | CCNGG | 4 cut(s) | 241, 485, 596, 1570 |
| MvaI | CCWGG | 1 cut(s) | 596 |
| MvnI | CGCG | 2 cut(s) | 909, 1311 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 193, 1579 |
| NciI | CCSGG | 3 cut(s) | 241, 485, 1570 |
| NlaIII | CATG | 6 cut(s) | 341, 779, 1124, 1196, 1246, 1294 |
| NlaIV | GGNNCC | 3 cut(s) | 460, 504, 1384 |
| NmuCI | GTSAC | 2 cut(s) | 724, 1238 |
| NspI | RCATGY | 2 cut(s) | 1196, 1246 |
| PciI | ACATGT | 1 cut(s) | 1192 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 226, 1292, 1383 |
| PdmI | GAANNNNTTC | 2 cut(s) | 204, 1116 |
| PfeI | GAWTC | 8 cut(s) | 38, 155, 284, 434, 470, 697, 827, 1321 |
| PkrI | GCNGC | 9 cut(s) | 543, 645, 867, 908, 927, 1009, 1440, 1509, 1581 |
| PleI | GAGTC | 5 cut(s) | 316, 472, 613, 833, 1029 |
| PpsI | GAGTC | 5 cut(s) | 316, 472, 613, 833, 1029 |
| PscI | ACATGT | 1 cut(s) | 1192 |
| Psp124BI | GAGCTC | 2 cut(s) | 1269, 1554 |
| Psp1406I | AACGTT | 1 cut(s) | 179 |
| Psp6I | CCWGG | 1 cut(s) | 594 |
| PspFI | CCCAGC | 1 cut(s) | 44 |
| PspGI | CCWGG | 1 cut(s) | 594 |
| PspN4I | GGNNCC | 3 cut(s) | 460, 504, 1384 |
| PspPI | GGNCC | 1 cut(s) | 109 |
| PstI | CTGCAG | 2 cut(s) | 870, 987 |
| PsuI | RGATCY | 2 cut(s) | 458, 1382 |
| PvuII | CAGCTG | 3 cut(s) | 44, 544, 928 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1247 |
| SacI | GAGCTC | 2 cut(s) | 1269, 1554 |
| SaqAI | TTAA | 4 cut(s) | 120, 419, 741, 1227 |
| SatI | GCNGC | 9 cut(s) | 542, 644, 866, 907, 926, 1008, 1439, 1508, 1580 |
| Sau96I | GGNCC | 1 cut(s) | 109 |
| SbfI | CCTGCAGG | 1 cut(s) | 987 |
| SchI | GAGTC | 5 cut(s) | 316, 473, 614, 833, 1029 |
| ScrFI | CCNGG | 4 cut(s) | 241, 485, 596, 1570 |
| SdaI | CCTGCAGG | 1 cut(s) | 987 |
| SduI | GDGCHC | 5 cut(s) | 1269, 1282, 1530, 1554, 1575 |
| SfaNI | GCATC | 3 cut(s) | 319, 686, 912 |
| SfcI | CTRYAG | 3 cut(s) | 866, 983, 1531 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1247 |
| SmlI | CTYRAG | 3 cut(s) | 740, 914, 968 |
| SmoI | CTYRAG | 3 cut(s) | 740, 914, 968 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 987 |
| SsiI | CCGC | 6 cut(s) | 346, 907, 1253, 1309, 1334, 1555 |
| SspMI | CTAG | 4 cut(s) | 402, 1275, 1403, 1586 |
| SstI | GAGCTC | 2 cut(s) | 1269, 1554 |
| StyD4I | CCNGG | 4 cut(s) | 239, 483, 594, 1568 |
| StyI | CCWWGG | 1 cut(s) | 304 |
| TaaI | ACNGT | 2 cut(s) | 74, 530 |
| TaiI | ACGT | 1 cut(s) | 182 |
| TaqI | TCGA | 2 cut(s) | 639, 1038 |
| TauI | GCSGC | 1 cut(s) | 909 |
| TfiI | GAWTC | 8 cut(s) | 38, 155, 284, 434, 470, 697, 827, 1321 |
| Tru1I | TTAA | 4 cut(s) | 120, 419, 741, 1227 |
| Tru9I | TTAA | 4 cut(s) | 120, 419, 741, 1227 |
| TscAI | CASTG | 1 cut(s) | 240 |
| TseFI | GTSAC | 2 cut(s) | 724, 1238 |
| TseI | GCWGC | 8 cut(s) | 541, 643, 865, 925, 1007, 1438, 1507, 1579 |
| Tsp45I | GTSAC | 2 cut(s) | 724, 1238 |
| TspDTI | ATGAA | 5 cut(s) | 146, 189, 438, 792, 1109 |
| TspGWI | ACGGA | 2 cut(s) | 235, 1109 |
| TspRI | CASTG | 1 cut(s) | 240 |
| Vha464I | CTTAAG | 1 cut(s) | 740 |
| XapI | RAATTY | 3 cut(s) | 212, 766, 792 |
| XceI | RCATGY | 2 cut(s) | 1196, 1246 |
| XmiI | GTMKAC | 1 cut(s) | 1128 |
| XmnI | GAANNNNTTC | 2 cut(s) | 204, 1116 |
| XspI | CTAG | 4 cut(s) | 402, 1275, 1403, 1586 |