Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007076

Physical Location & Seq

Genomic Coordinates Reverse (-)

2199749 .. 2203920

Gene Structure 4172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1030800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGGGCGAGCAAACCCAGGGCCAAACCCAAGCCCAGCCCCAGACTCCGACTCAAGCTCCGACTCCGGCTCAGCCGCCGCCGCACCATGACTCCATCGACGATACCACAATCGCCCAAGTCGGCCCCACACCCACCGAGCTGAGCAATGCTCCGTCCAAGACCTCTTCCCCCCCTTCTAAAATCCCCTTCCGCCCCCGAAAGATCCGGAAGCTCTCGCCCGACAGCGCCGACCCCGCTTCCTCCCTTCAAATCGTCGTCGTCCCGGACGCCCCCAAACCCGTCGCCGCCACCAAGGCTTCCAAGATCAAGACCGTCCCGCAGCGCCCCGTTTCGGCGCCCAAAATTGTGGCGCGGCCACTTTCCTGCGAGGGAGAGATCGAGACGGCGATTCGCTATCTCCGAAACGCCGATCCGCTCCTGGCTCCGTTGATCGACCTCCACCCGCGGCCGACCTTCGACAACTTCCACACCCCCTTCCTTGCCCTAACCCGCAGCATTCTCTACCAGCAACTCGCGTACAAGGCCGGCACGTCGATCTACACGCGCTTCATCGGGCTGTGCGGCGGCGAGGCCTGCGTCGTACCCGAAACCGTGCTCGCCCAGACGCCGCAGCAGCTCCGGCAAGTCGGAATTTCGGGCCGGAAAGCGAGTTACCTCCACGACTTGGCGCGGAAGTACCAGAACGGCATTCTATCGGACTCGGCGATTGTAAATATGGACGACAAGTCGTTGTTCACAATGCTGACGATGGTCAACGGGATCGGGTCTTGGTCTGTGCACATGTTCATGATTAACTCGCTGCACAGGCCCGACGTGCTTCCGATCAACGACCTCGGAATCCGGAAAGGCGTTCAGCTTCTGTACAATCTTGAGGAGCTGCCTCGGCCGTCGCAGATGGAGCAGCTGTGCGAAAAGTGGCGGCCTTACCGGTCAGTAGCGACGATGTATATGTGGAGATTTTCTGAATCAAATGGGGCTCCTTCGAGTGCGGCCGGTGCGAGTCTGCGACCACAGCAGCTTCAGCAGCAGGAGCCGCAACAACAGCAGCAGCAGCAGCACTCGCAGCATCCCCAGCAACAGCAGCTTATGGATTCCTTCAGCAGTCTTATTAATATTGGGGCCTGTACCTGGGGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003905 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006304 GO:0006307 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008725 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0032131 GO:0032991 GO:0032993 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043412 GO:0043733 GO:0043916 GO:0044237 GO:0044238 GO:0044260 GO:0045007 GO:0046483 GO:0050896 GO:0051716 GO:0052820 GO:0071704 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD

Protein Analysis

380

Amino Acids

41.8

Weight (kDa)

9.04

Isoelectric Point (pI)

54.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HhH-GPD	PF00730	164 - 307	3.7e-18	HhH-GPD superfamily base excision DNA repair protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19480 AT1G19480 AT1G75230 AT1G75230
fragaria_vesca	FvH4_2g39710
malus_domestica	MD08G1030800.v1.1 MD15G1026100.v1.1 MD15G1026200.v1.1
prunus_persica	Prupe.1G378400_v2.0.a1 Prupe.1G378400_v2.0.a1 Prupe.1G378400_v2.0.a1
pyrus_communis	pycom08g02420 pycom15g02230
rosa_chinensis	RchiOBHm_Chr1g0355191 RchiOBHm_Chr6g0301151
rosa_laevigata	RLG00000011273 RLG00000028172
rosa_multiflora	Rmu_sc0000163.1_g000005
rosa_roxburghii	Rroxscaffold_172G00445480
rosa_rugosa	Rorug01G0245600 Rorug06G0302100
rosa_samantha	Rh6AG415300 Rh6BG422200 Rh6CG429800 Rh6DG415100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	334
AccB7I	CCANNNNNTGG	1 cut(s)	664
AccBSI	CCGCTC	1 cut(s)	415
AccII	CGCG	5 cut(s)	352, 445, 515, 544, 670
AccIII	TCCGGA	2 cut(s)	204, 840
AclWI	GGATC	3 cut(s)	196, 404, 767
AcoI	YGGCCR	4 cut(s)	353, 446, 884, 990
AcsI	RAATTY	1 cut(s)	630
AcuI	CTGAAG	2 cut(s)	1004, 1081
AcyI	GRCGYC	3 cut(s)	267, 335, 605
AfaI	GTAC	5 cut(s)	518, 582, 677, 863, 1126
AfiI	CCNNNNNNNGG	3 cut(s)	331, 664, 1128
AflIII	ACRYGT	1 cut(s)	780
AgeI	ACCGGT	1 cut(s)	927
AgsI	TTSAA	1 cut(s)	248
AhdI	GACNNNNNGTC	1 cut(s)	724
AjiI	CACGTC	2 cut(s)	531, 814
AjnI	CCWGG	3 cut(s)	15, 417, 1127
AluBI	AGCT	9 cut(s)	56, 139, 211, 616, 856, 877, 904, 1018, 1084
AluI	AGCT	9 cut(s)	56, 139, 211, 616, 856, 877, 904, 1018, 1084
Alw21I	GWGCWC	2 cut(s)	597, 780
Alw26I	GTCTC	1 cut(s)	374
Alw44I	GTGCAC	1 cut(s)	776
AlwI	GGATC	3 cut(s)	196, 404, 767
AlwNI	CAGNNNCTG	1 cut(s)	859
Aor13HI	TCCGGA	2 cut(s)	204, 840
ApaLI	GTGCAC	1 cut(s)	776
ApoI	RAATTY	1 cut(s)	630
AseI	ATTAAT	1 cut(s)	1110
AsiGI	ACCGGT	1 cut(s)	927
AspLEI	GCGC	6 cut(s)	227, 324, 337, 352, 546, 670
AspS9I	GGNCC	6 cut(s)	19, 122, 637, 807, 1119, 1133
AsuC2I	CCSGG	1 cut(s)	263
AvaII	GGWCC	1 cut(s)	1133
BaeGI	GKGCMC	1 cut(s)	780
BanI	GGYRCC	1 cut(s)	334
BanII	GRGCYC	1 cut(s)	979
Bbv12I	GWGCWC	2 cut(s)	597, 780
BccI	CCATC	3 cut(s)	101, 742, 889
BceAI	ACGGC	3 cut(s)	399, 700, 871
BciT130I	CCWGG	3 cut(s)	17, 419, 1129
BcnI	CCSGG	1 cut(s)	263
BcoDI	GTCTC	1 cut(s)	374
BfoI	RGCGCY	3 cut(s)	228, 325, 338
BglI	GCCNNNNNGGC	1 cut(s)	293
BlpI	GCTNAGC	2 cut(s)	69, 140
Bme1390I	CCNGG	4 cut(s)	17, 263, 419, 1129
Bme18I	GGWCC	1 cut(s)	1133
BmeRI	GACNNNNNGTC	1 cut(s)	724
BmgBI	CACGTC	2 cut(s)	531, 814
BmgT120I	GGNCC	6 cut(s)	19, 122, 637, 807, 1119, 1133
BmiI	GGNNCC	7 cut(s)	124, 336, 423, 978, 1032, 1120, 1134
BmrFI	CCNGG	4 cut(s)	17, 263, 419, 1129
BmsI	GCATC	1 cut(s)	1075
BoxI	GACNNNNGTC	1 cut(s)	749
BplI	GAGNNNNNCTC	2 cut(s)	133, 165
Bpu1102I	GCTNAGC	2 cut(s)	69, 140
BpuEI	CTTGAG	2 cut(s)	36, 890
BpuMI	CCSGG	1 cut(s)	263
BsaHI	GRCGYC	3 cut(s)	267, 335, 605
BsaJI	CCNNGG	7 cut(s)	15, 16, 291, 443, 832, 881, 1128
BsaWI	WCCGGW	3 cut(s)	204, 840, 927
BsaXI	ACNNNNNCTCC	6 cut(s)	40, 70, 74, 104, 890, 920
Bsc4I	CCNNNNNNNGG	3 cut(s)	331, 664, 1128
Bse118I	RCCGGY	3 cut(s)	524, 927, 992
Bse3DI	GCAATG	1 cut(s)	151
BseAI	TCCGGA	2 cut(s)	204, 840
BseBI	CCWGG	3 cut(s)	17, 419, 1129
BseDI	CCNNGG	7 cut(s)	15, 16, 291, 443, 832, 881, 1128
BseGI	GGATG	1 cut(s)	1066
BseLI	CCNNNNNNNGG	3 cut(s)	331, 664, 1128
BseMI	GCAATG	1 cut(s)	151
BseMII	CTCAG	2 cut(s)	83, 131
BseRI	GAGGAG	1 cut(s)	887
BseSI	GKGCMC	1 cut(s)	780
BseX3I	CGGCCG	3 cut(s)	446, 884, 990
BseYI	CCCAGC	2 cut(s)	33, 1071
BsgI	GTGCAG	1 cut(s)	785
Bsh1236I	CGCG	5 cut(s)	352, 445, 515, 544, 670
Bsh1285I	CGRYCG	3 cut(s)	449, 887, 993
BshNI	GGYRCC	1 cut(s)	334
BshTI	ACCGGT	1 cut(s)	927
BsiEI	CGRYCG	3 cut(s)	449, 887, 993
BsiHKAI	GWGCWC	2 cut(s)	597, 780
BsiSI	CCGG	9 cut(s)	65, 205, 263, 525, 619, 640, 841, 928, 993
BslFI	GGGAC	2 cut(s)	245, 299
BslI	CCNNNNNNNGG	3 cut(s)	331, 664, 1128
BsmAI	GTCTC	1 cut(s)	374
BsmBI	CGTCTC	1 cut(s)	374
BsmFI	GGGAC	2 cut(s)	245, 299
BsmI	GAATGC	2 cut(s)	495, 687
Bsp1286I	GDGCHC	3 cut(s)	597, 780, 979
Bsp13I	TCCGGA	2 cut(s)	204, 840
Bsp1407I	TGTACA	1 cut(s)	861
Bsp143I	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
Bsp1720I	GCTNAGC	2 cut(s)	69, 140
BspCNI	CTCAG	2 cut(s)	82, 132
BspEI	TCCGGA	2 cut(s)	204, 840
BspFNI	CGCG	5 cut(s)	352, 445, 515, 544, 670
BspHI	TCATGA	1 cut(s)	786
BspLI	GGNNCC	7 cut(s)	124, 336, 423, 978, 1032, 1120, 1134
BspPI	GGATC	3 cut(s)	196, 404, 767
BspT107I	GGYRCC	1 cut(s)	334
BsrBI	CCGCTC	1 cut(s)	415
BsrDI	GCAATG	1 cut(s)	151
BsrFI	RCCGGY	3 cut(s)	524, 927, 992
BsrGI	TGTACA	1 cut(s)	861
BssAI	RCCGGY	3 cut(s)	524, 927, 992
BssECI	CCNNGG	7 cut(s)	15, 16, 291, 443, 832, 881, 1128
BssMI	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
BssNI	GRCGYC	3 cut(s)	267, 335, 605
BssT1I	CCWWGG	1 cut(s)	291
Bst2UI	CCWGG	3 cut(s)	17, 419, 1129
Bst4CI	ACNGT	2 cut(s)	313, 592
Bst6I	CTCTTC	1 cut(s)	169
BstACI	GRCGYC	3 cut(s)	267, 335, 605
BstAUI	TGTACA	1 cut(s)	861
BstC8I	GCNNGC	4 cut(s)	8, 526, 574, 597
BstDEI	CTNAG	2 cut(s)	69, 140
BstDSI	CCRYGG	1 cut(s)	443
BstF5I	GGATG	1 cut(s)	1066
BstFNI	CGCG	5 cut(s)	352, 445, 515, 544, 670
BstH2I	RGCGCY	3 cut(s)	228, 325, 338
BstHHI	GCGC	6 cut(s)	227, 324, 337, 352, 546, 670
BstKTI	GATC	8 cut(s)	204, 306, 378, 412, 432, 537, 762, 825
BstMAI	GTCTC	1 cut(s)	374
BstMBI	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
BstMCI	CGRYCG	3 cut(s)	449, 887, 993
BstNI	CCWGG	3 cut(s)	17, 419, 1129
BstNSI	RCATGY	1 cut(s)	784
BstPAI	GACNNNNGTC	1 cut(s)	749
BstSCI	CCNGG	4 cut(s)	15, 261, 417, 1127
BstSLI	GKGCMC	1 cut(s)	780
BstUI	CGCG	5 cut(s)	352, 445, 515, 544, 670
BstX2I	RGATCY	1 cut(s)	201
BstXI	CCANNNNNNTGG	1 cut(s)	346
BstYI	RGATCY	1 cut(s)	201
BstZI	CGGCCG	3 cut(s)	446, 884, 990
BtgI	CCRYGG	1 cut(s)	443
BtrI	CACGTC	2 cut(s)	531, 814
BtsCI	GGATG	1 cut(s)	1066
Cac8I	GCNNGC	4 cut(s)	8, 526, 574, 597
CaiI	CAGNNNCTG	1 cut(s)	859
CciI	TCATGA	1 cut(s)	786
CfoI	GCGC	6 cut(s)	227, 324, 337, 352, 546, 670
Cfr10I	RCCGGY	3 cut(s)	524, 927, 992
Cfr13I	GGNCC	6 cut(s)	19, 122, 637, 807, 1119, 1133
Cfr42I	CCGCGG	1 cut(s)	446
CseI	GACGC	3 cut(s)	275, 565, 613
Csp6I	GTAC	5 cut(s)	517, 581, 676, 862, 1125
CspAI	ACCGGT	1 cut(s)	927
CviAII	CATG	3 cut(s)	86, 781, 787
CviQI	GTAC	5 cut(s)	517, 581, 676, 862, 1125
DdeI	CTNAG	2 cut(s)	69, 140
DinI	GGCGCC	1 cut(s)	336
DpnI	GATC	8 cut(s)	203, 305, 377, 411, 431, 536, 761, 824
DpnII	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
DriI	GACNNNNNGTC	1 cut(s)	724
EaeI	YGGCCR	4 cut(s)	353, 446, 884, 990
EagI	CGGCCG	3 cut(s)	446, 884, 990
Eam1104I	CTCTTC	1 cut(s)	169
Eam1105I	GACNNNNNGTC	1 cut(s)	724
EarI	CTCTTC	1 cut(s)	169
EciI	GGCGGA	1 cut(s)	179
EclXI	CGGCCG	3 cut(s)	446, 884, 990
Eco130I	CCWWGG	1 cut(s)	291
Eco147I	AGGCCT	1 cut(s)	572
Eco24I	GRGCYC	1 cut(s)	979
Eco47I	GGWCC	1 cut(s)	1133
Eco52I	CGGCCG	3 cut(s)	446, 884, 990
Eco57I	CTGAAG	2 cut(s)	1004, 1081
EcoO109I	RGGNCCY	2 cut(s)	1119, 1133
EcoRII	CCWGG	3 cut(s)	15, 417, 1127
EcoT14I	CCWWGG	1 cut(s)	291
EcoT38I	GRGCYC	1 cut(s)	979
EgeI	GGCGCC	1 cut(s)	336
EheI	GGCGCC	1 cut(s)	336
ErhI	CCWWGG	1 cut(s)	291
Esp3I	CGTCTC	1 cut(s)	374
FaeI	CATG	3 cut(s)	89, 784, 790
FaiI	YATR	7 cut(s)	87, 716, 782, 788, 948, 950, 1088
FaqI	GGGAC	2 cut(s)	245, 299
FatI	CATG	3 cut(s)	85, 780, 786
FauI	CCCGC	4 cut(s)	241, 324, 450, 497
FokI	GGATG	1 cut(s)	1053
FriOI	GRGCYC	1 cut(s)	979
GlaI	GCGC	6 cut(s)	226, 323, 336, 351, 545, 669
GsaI	CCCAGC	2 cut(s)	37, 1075
HaeII	RGCGCY	3 cut(s)	228, 325, 338
HapII	CCGG	9 cut(s)	65, 205, 263, 525, 619, 640, 841, 928, 993
HgaI	GACGC	3 cut(s)	275, 565, 613
HhaI	GCGC	6 cut(s)	227, 324, 337, 352, 546, 670
Hin1I	GRCGYC	3 cut(s)	267, 335, 605
Hin1II	CATG	3 cut(s)	89, 784, 790
Hin6I	GCGC	6 cut(s)	225, 322, 335, 350, 544, 668
HinP1I	GCGC	6 cut(s)	225, 322, 335, 350, 544, 668
HincII	GTYRAC	1 cut(s)	754
HindII	GTYRAC	1 cut(s)	754
HpaII	CCGG	9 cut(s)	65, 205, 263, 525, 619, 640, 841, 928, 993
Hpy166II	GTNNAC	3 cut(s)	735, 754, 778
Hpy188I	TCNGA	8 cut(s)	48, 60, 401, 629, 697, 822, 836, 964
Hpy188III	TCNNGA	6 cut(s)	205, 307, 379, 787, 841, 869
Hpy8I	GTNNAC	3 cut(s)	735, 754, 778
Hpy99I	CGWCG	9 cut(s)	101, 257, 260, 284, 535, 581, 815, 892, 943
HpyAV	CCTTC	7 cut(s)	183, 196, 254, 463, 484, 990, 1105
HpyCH4III	ACNGT	2 cut(s)	313, 592
HpyCH4IV	ACGT	2 cut(s)	530, 813
HpyCH4V	TGCA	2 cut(s)	778, 802
HpyF3I	CTNAG	2 cut(s)	69, 140
HpySE526I	ACGT	2 cut(s)	530, 813
Hsp92I	GRCGYC	3 cut(s)	267, 335, 605
Hsp92II	CATG	3 cut(s)	89, 784, 790
HspAI	GCGC	6 cut(s)	225, 322, 335, 350, 544, 668
KasI	GGCGCC	1 cut(s)	334
Kpn2I	TCCGGA	2 cut(s)	204, 840
KroI	GCCGGC	1 cut(s)	524
KroNI	GCCGGC	1 cut(s)	526
KspI	CCGCGG	1 cut(s)	446
Kzo9I	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
LmnI	GCTCC	9 cut(s)	61, 154, 420, 427, 621, 874, 898, 982, 1030
LweI	GCATC	1 cut(s)	1075
MaeII	ACGT	2 cut(s)	530, 813
MaeIII	GTNAC	1 cut(s)	650
MalI	GATC	8 cut(s)	203, 305, 377, 411, 431, 536, 761, 824
MbiI	CCGCTC	1 cut(s)	415
MboI	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
MboII	GAAGA	1 cut(s)	156
MflI	RGATCY	1 cut(s)	201
MhlI	GDGCHC	3 cut(s)	597, 780, 979
MluCI	AATT	2 cut(s)	342, 630
Mly113I	GGCGCC	1 cut(s)	335
MlyI	GAGTC	6 cut(s)	37, 43, 55, 83, 692, 1009
MmeI	TCCRAC	3 cut(s)	71, 83, 607
MnlI	CCTC	9 cut(s)	172, 250, 361, 446, 562, 665, 842, 865, 891
MroI	TCCGGA	2 cut(s)	204, 840
MroNI	GCCGGC	1 cut(s)	524
MseI	TTAA	2 cut(s)	792, 1110
MslI	CAYNNNNRTG	1 cut(s)	785
MspA1I	CMGCKG	2 cut(s)	445, 904
MspI	CCGG	9 cut(s)	65, 205, 263, 525, 619, 640, 841, 928, 993
MspR9I	CCNGG	4 cut(s)	17, 263, 419, 1129
Mva1269I	GAATGC	2 cut(s)	495, 687
MvaI	CCWGG	3 cut(s)	17, 419, 1129
MvnI	CGCG	5 cut(s)	352, 445, 515, 544, 670
NaeI	GCCGGC	1 cut(s)	526
NarI	GGCGCC	1 cut(s)	335
NciI	CCSGG	1 cut(s)	263
NdeII	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
NgoMIV	GCCGGC	1 cut(s)	524
NlaIII	CATG	3 cut(s)	89, 784, 790
NlaIV	GGNNCC	7 cut(s)	124, 336, 423, 978, 1032, 1120, 1134
NmeAIII	GCCGAG	2 cut(s)	680, 862
NspI	RCATGY	1 cut(s)	784
PagI	TCATGA	1 cut(s)	786
PasI	CCCWGGG	1 cut(s)	16
PceI	AGGCCT	1 cut(s)	572
PciI	ACATGT	1 cut(s)	780
PcsI	WCGNNNNNNNCGW	2 cut(s)	397, 701
PctI	GAATGC	2 cut(s)	495, 687
PdiI	GCCGGC	1 cut(s)	526
PfeI	GAWTC	4 cut(s)	388, 837, 965, 1091
PflMI	CCANNNNNTGG	1 cut(s)	664
PfoI	TCCNGGA	1 cut(s)	261
PinAI	ACCGGT	1 cut(s)	927
PleI	GAGTC	6 cut(s)	37, 43, 55, 83, 692, 1008
PluTI	GGCGCC	1 cut(s)	338
PpsI	GAGTC	6 cut(s)	37, 43, 55, 83, 692, 1008
PpuMI	RGGWCCY	1 cut(s)	1133
PscI	ACATGT	1 cut(s)	780
PshAI	GACNNNNGTC	1 cut(s)	749
PshBI	ATTAAT	1 cut(s)	1110
Psp5II	RGGWCCY	1 cut(s)	1133
Psp6I	CCWGG	3 cut(s)	15, 417, 1127
PspFI	CCCAGC	2 cut(s)	33, 1071
PspGI	CCWGG	3 cut(s)	15, 417, 1127
PspN4I	GGNNCC	7 cut(s)	124, 336, 423, 978, 1032, 1120, 1134
PspPI	GGNCC	6 cut(s)	19, 122, 637, 807, 1119, 1133
PspPPI	RGGWCCY	1 cut(s)	1133
PstNI	CAGNNNCTG	1 cut(s)	859
PsuI	RGATCY	1 cut(s)	201
PvuII	CAGCTG	1 cut(s)	904
RsaI	GTAC	5 cut(s)	518, 582, 677, 863, 1126
RsaNI	GTAC	5 cut(s)	517, 581, 676, 862, 1125
RseI	CAYNNNNRTG	1 cut(s)	785
SacII	CCGCGG	1 cut(s)	446
SaqAI	TTAA	2 cut(s)	792, 1110
Sau3AI	GATC	8 cut(s)	201, 303, 375, 409, 429, 534, 759, 822
Sau96I	GGNCC	6 cut(s)	19, 122, 637, 807, 1119, 1133
SchI	GAGTC	6 cut(s)	37, 43, 55, 83, 692, 1009
ScrFI	CCNGG	4 cut(s)	17, 263, 419, 1129
SduI	GDGCHC	3 cut(s)	597, 780, 979
SfaNI	GCATC	1 cut(s)	1075
SfoI	GGCGCC	1 cut(s)	336
Sfr303I	CCGCGG	1 cut(s)	446
SgrBI	CCGCGG	1 cut(s)	446
SinI	GGWCC	1 cut(s)	1133
SmiMI	CAYNNNNRTG	1 cut(s)	785
SmlI	CTYRAG	2 cut(s)	51, 869
SmoI	CTYRAG	2 cut(s)	51, 869
Sse9I	AATT	2 cut(s)	342, 630
SseBI	AGGCCT	1 cut(s)	572
SspDI	GGCGCC	1 cut(s)	334
SspI	AATATT	1 cut(s)	1114
StuI	AGGCCT	1 cut(s)	572
StyD4I	CCNGG	4 cut(s)	15, 261, 417, 1127
StyI	CCWWGG	1 cut(s)	291
TaaI	ACNGT	2 cut(s)	313, 592
TaiI	ACGT	2 cut(s)	533, 816
TaqI	TCGA	6 cut(s)	96, 378, 432, 456, 533, 983
TasI	AATT	2 cut(s)	342, 630
TatI	WGTACW	1 cut(s)	861
TfiI	GAWTC	4 cut(s)	388, 837, 965, 1091
Tru1I	TTAA	2 cut(s)	792, 1110
Tru9I	TTAA	2 cut(s)	792, 1110
TspDTI	ATGAA	2 cut(s)	538, 775
TspGWI	ACGGA	2 cut(s)	141, 414
Van91I	CCANNNNNTGG	1 cut(s)	664
VneI	GTGCAC	1 cut(s)	776
VpaK11BI	GGWCC	1 cut(s)	1133
VspI	ATTAAT	1 cut(s)	1110
XapI	RAATTY	1 cut(s)	630
XceI	RCATGY	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.