Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007076

Physical Location & Seq

Genomic Coordinates Reverse (-)

1521701 .. 1525494

Gene Structure 3794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1026100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGGGCGAGCAAACCCAGGTCCAAACCCAAGCCCAAGACCAGCCCCAGACTCCCACTCAGGCTCCGACTCCGGCTCAGCCGCCGCCGCAGCATGACTCCATCGACGACACCACAATCGCTCAAGTCGGCCCCACACCCACCGAACTGAGCAATGCTCCGTCCAAGACCTCTTCCCCCCCTTCCAAAATCCCGTTCCGCCCCCGAAAGATCCGGAAGCTCTCGCCCGATACCGCCGACCCCAATTCCTCCCATCAAATCGTCGCCGTATCCGAAACTCCCAAACCCGTCGCCGCCACCAAGGCCTCCAAGATCAAGACCGTCCCGCAGCGCGCCGTTGCGGCGCCCAAAATCGTAGCGCGGCCGCTTTCCTGCGAGGGAGAGATCGAGACGGCGATTCGCTATCTCCGAAACGCTGATCCGCTCCTAGCTCCGTTGATCGACCGCCACCCGCGGCCGACCTTCGACAACTTCCACACACCCTTCCTCGCCCTAACCCGCAGCATTCTCTACCAGCAACTCGCATACAAGGCCGGCACGTCGATCTACACGCGCTTCATCGGGCTGTGCGGCGGCGAGGCCTGCGTCGTACCCGAAACCGTGCTCGCCCAGACGCCACAGCAGCTCCGGCAAATCGGAATTTCGGGCCGGAAAGCGAGTTACCTCCACGACTTGGCGCGGAAGTACCAGAACGGCATTCTGTCGGACTCGGCGATTGTAAATATGGACGACAAGTCGTTGTTCACAATGCTGACGATGGTCAACGGGATCGGGTCTTGGTCTGTGCACATGTTCATGATTAACTCGCTGCACAGGCCCGACGTGCTTCCGATCAACGACCTCGGAATCCGAAAAGGCGTTCAGCTTCTGTACAATCTCGAGGAGTTGCCTCGGCCGTCGCAGATGGAGCAGCTGTGCGAAAAGTGGCGGCCATACCGGTCTGTAGCGACGATGTATATGTGGAGATTTTCCGAGTCAAATGGGGCTCCTTCCAGCGCAGCCGCCGTGGCAGCCGGTGCTTGTCTGCGACCACAGCAGCTTCAGCAGCAGCAGCAGCACTCGCAGCATCCCCAGCAACAGCAGCTTATGGATTCCCTCAGCAGTCTTATTAACATTGGGAATGGTGCATGCATTCATGGTGAACTATCCTTTTCCATGCCATGTGATGCAGGGCCTGTTCCTGGGCACCTTGAACGGGAATGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003905 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006304 GO:0006307 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008725 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0032131 GO:0032991 GO:0032993 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043412 GO:0043733 GO:0043916 GO:0044237 GO:0044238 GO:0044260 GO:0045007 GO:0046483 GO:0050896 GO:0051716 GO:0052820 GO:0071704 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD

Protein Analysis

402

Amino Acids

44.1

Weight (kDa)

8.62

Isoelectric Point (pI)

49.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HhH-GPD	PF00730	166 - 309	1.9e-18	HhH-GPD superfamily base excision DNA repair protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19480 AT1G19480 AT1G75230 AT1G75230
fragaria_vesca	FvH4_2g39710
malus_domestica	MD08G1030800.v1.1 MD15G1026100.v1.1 MD15G1026200.v1.1
prunus_persica	Prupe.1G378400_v2.0.a1 Prupe.1G378400_v2.0.a1 Prupe.1G378400_v2.0.a1
pyrus_communis	pycom08g02420 pycom15g02230
rosa_chinensis	RchiOBHm_Chr1g0355191 RchiOBHm_Chr6g0301151
rosa_laevigata	RLG00000011273 RLG00000028172
rosa_multiflora	Rmu_sc0000163.1_g000005
rosa_roxburghii	Rroxscaffold_172G00445480
rosa_rugosa	Rorug01G0245600 Rorug06G0302100
rosa_samantha	Rh6AG415300 Rh6BG422200 Rh6CG429800 Rh6DG415100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	340, 1182
AccB7I	CCANNNNNTGG	1 cut(s)	670
AccBSI	CCGCTC	1 cut(s)	421
AccII	CGCG	5 cut(s)	330, 358, 451, 550, 676
AccIII	TCCGGA	1 cut(s)	210
AclWI	GGATC	3 cut(s)	202, 410, 773
AcoI	YGGCCR	4 cut(s)	359, 452, 890, 926
AcsI	RAATTY	1 cut(s)	636
AcuI	CTGAAG	1 cut(s)	1022
AcyI	GRCGYC	2 cut(s)	341, 611
AfaI	GTAC	3 cut(s)	588, 683, 869
AfiI	CCNNNNNNNGG	3 cut(s)	670, 1178, 1192
AflIII	ACRYGT	1 cut(s)	786
AgeI	ACCGGT	1 cut(s)	933
AgsI	TTSAA	1 cut(s)	1190
AhdI	GACNNNNNGTC	1 cut(s)	730
AjiI	CACGTC	2 cut(s)	537, 820
AjnI	CCWGG	2 cut(s)	15, 1177
AjuI	GAANNNNNNNTTGG	2 cut(s)	176, 208
AluBI	AGCT	7 cut(s)	217, 428, 622, 862, 910, 1036, 1081
AluI	AGCT	7 cut(s)	217, 428, 622, 862, 910, 1036, 1081
Alw21I	GWGCWC	2 cut(s)	603, 786
Alw26I	GTCTC	1 cut(s)	380
Alw44I	GTGCAC	1 cut(s)	782
AlwI	GGATC	3 cut(s)	202, 410, 773
AlwNI	CAGNNNCTG	2 cut(s)	865, 1172
Ama87I	CYCGRG	1 cut(s)	875
Aor13HI	TCCGGA	1 cut(s)	210
ApaLI	GTGCAC	1 cut(s)	782
ApoI	RAATTY	1 cut(s)	636
AsiGI	ACCGGT	1 cut(s)	933
AspLEI	GCGC	7 cut(s)	330, 332, 343, 358, 552, 676, 995
AspS9I	GGNCC	5 cut(s)	19, 128, 643, 813, 1169
AsuHPI	GGTGA	1 cut(s)	1148
AvaI	CYCGRG	1 cut(s)	875
AvaII	GGWCC	1 cut(s)	19
BaeGI	GKGCMC	2 cut(s)	786, 1185
BanI	GGYRCC	2 cut(s)	340, 1182
BanII	GRGCYC	1 cut(s)	985
Bbv12I	GWGCWC	2 cut(s)	603, 786
BbvCI	CCTCAGC	1 cut(s)	1094
BccI	CCATC	4 cut(s)	107, 258, 748, 895
BceAI	ACGGC	6 cut(s)	248, 317, 405, 706, 877, 986
BciT130I	CCWGG	2 cut(s)	17, 1179
BciVI	GTATCC	1 cut(s)	277
BcoDI	GTCTC	1 cut(s)	380
BfaI	CTAG	1 cut(s)	425
BfmI	CTRYAG	1 cut(s)	939
BfoI	RGCGCY	1 cut(s)	344
BfuI	GTATCC	1 cut(s)	277
BglI	GCCNNNNNGGC	3 cut(s)	299, 338, 1004
BlpI	GCTNAGC	1 cut(s)	75
Bme1390I	CCNGG	2 cut(s)	17, 1179
Bme18I	GGWCC	1 cut(s)	19
BmeRI	GACNNNNNGTC	1 cut(s)	730
BmeT110I	CYCGRG	1 cut(s)	875
BmgBI	CACGTC	2 cut(s)	537, 820
BmgT120I	GGNCC	5 cut(s)	19, 128, 643, 813, 1169
BmiI	GGNNCC	5 cut(s)	63, 130, 342, 984, 1184
BmrFI	CCNGG	2 cut(s)	17, 1179
BmsI	GCATC	2 cut(s)	1072, 1153
BoxI	GACNNNNGTC	1 cut(s)	755
BplI	GAGNNNNNCTC	2 cut(s)	139, 171
Bpu10I	CCTNAGC	1 cut(s)	1094
Bpu1102I	GCTNAGC	1 cut(s)	75
BpuEI	CTTGAG	1 cut(s)	105
BsaHI	GRCGYC	2 cut(s)	341, 611
BsaJI	CCNNGG	7 cut(s)	15, 297, 449, 838, 887, 1002, 1178
BsaWI	WCCGGW	2 cut(s)	210, 933
BsaXI	ACNNNNNCTCC	6 cut(s)	46, 76, 606, 636, 896, 926
Bsc4I	CCNNNNNNNGG	3 cut(s)	670, 1178, 1192
Bse118I	RCCGGY	3 cut(s)	530, 933, 1010
Bse3DI	GCAATG	1 cut(s)	157
BseAI	TCCGGA	1 cut(s)	210
BseBI	CCWGG	2 cut(s)	17, 1179
BseDI	CCNNGG	7 cut(s)	15, 297, 449, 838, 887, 1002, 1178
BseGI	GGATG	1 cut(s)	1063
BseLI	CCNNNNNNNGG	3 cut(s)	670, 1178, 1192
BseMI	GCAATG	1 cut(s)	157
BseMII	CTCAG	4 cut(s)	71, 89, 137, 1108
BsePI	GCGCGC	1 cut(s)	328
BseRI	GAGGAG	1 cut(s)	893
BseSI	GKGCMC	2 cut(s)	786, 1185
BseX3I	CGGCCG	3 cut(s)	359, 452, 890
BseYI	CCCAGC	1 cut(s)	1068
BsgI	GTGCAG	1 cut(s)	791
Bsh1236I	CGCG	5 cut(s)	330, 358, 451, 550, 676
Bsh1285I	CGRYCG	4 cut(s)	362, 442, 455, 893
BshNI	GGYRCC	2 cut(s)	340, 1182
BshTI	ACCGGT	1 cut(s)	933
BsiEI	CGRYCG	4 cut(s)	362, 442, 455, 893
BsiHKAI	GWGCWC	2 cut(s)	603, 786
BsiHKCI	CYCGRG	1 cut(s)	875
BsiSI	CCGG	7 cut(s)	71, 211, 531, 625, 646, 934, 1011
BslFI	GGGAC	1 cut(s)	305
BslI	CCNNNNNNNGG	3 cut(s)	670, 1178, 1192
BsmAI	GTCTC	1 cut(s)	380
BsmBI	CGTCTC	1 cut(s)	380
BsmFI	GGGAC	1 cut(s)	305
BsmI	GAATGC	3 cut(s)	501, 693, 1128
BsoBI	CYCGRG	1 cut(s)	875
Bsp1286I	GDGCHC	4 cut(s)	603, 786, 985, 1185
Bsp13I	TCCGGA	1 cut(s)	210
Bsp1407I	TGTACA	1 cut(s)	867
Bsp143I	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
Bsp1720I	GCTNAGC	1 cut(s)	75
BspCNI	CTCAG	4 cut(s)	70, 88, 138, 1107
BspEI	TCCGGA	1 cut(s)	210
BspFNI	CGCG	5 cut(s)	330, 358, 451, 550, 676
BspHI	TCATGA	1 cut(s)	792
BspLI	GGNNCC	5 cut(s)	63, 130, 342, 984, 1184
BspPI	GGATC	3 cut(s)	202, 410, 773
BspT107I	GGYRCC	2 cut(s)	340, 1182
BsrBI	CCGCTC	1 cut(s)	421
BsrDI	GCAATG	1 cut(s)	157
BsrFI	RCCGGY	3 cut(s)	530, 933, 1010
BsrGI	TGTACA	1 cut(s)	867
BssAI	RCCGGY	3 cut(s)	530, 933, 1010
BssECI	CCNNGG	7 cut(s)	15, 297, 449, 838, 887, 1002, 1178
BssHII	GCGCGC	1 cut(s)	328
BssMI	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
BssNI	GRCGYC	2 cut(s)	341, 611
BssT1I	CCWWGG	1 cut(s)	297
Bst2UI	CCWGG	2 cut(s)	17, 1179
Bst4CI	ACNGT	2 cut(s)	319, 598
Bst6I	CTCTTC	1 cut(s)	175
BstACI	GRCGYC	2 cut(s)	341, 611
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstAUI	TGTACA	1 cut(s)	867
BstC8I	GCNNGC	6 cut(s)	8, 330, 532, 580, 603, 1126
BstDEI	CTNAG	4 cut(s)	57, 75, 146, 1094
BstDSI	CCRYGG	2 cut(s)	449, 1002
BstF5I	GGATG	1 cut(s)	1063
BstFNI	CGCG	5 cut(s)	330, 358, 451, 550, 676
BstH2I	RGCGCY	1 cut(s)	344
BstHHI	GCGC	7 cut(s)	330, 332, 343, 358, 552, 676, 995
BstKTI	GATC	8 cut(s)	210, 312, 384, 418, 438, 543, 768, 831
BstMAI	GTCTC	1 cut(s)	380
BstMBI	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
BstMCI	CGRYCG	4 cut(s)	362, 442, 455, 893
BstNI	CCWGG	2 cut(s)	17, 1179
BstNSI	RCATGY	2 cut(s)	790, 1128
BstPAI	GACNNNNGTC	1 cut(s)	755
BstSCI	CCNGG	2 cut(s)	15, 1177
BstSFI	CTRYAG	1 cut(s)	939
BstSLI	GKGCMC	2 cut(s)	786, 1185
BstUI	CGCG	5 cut(s)	330, 358, 451, 550, 676
BstX2I	RGATCY	1 cut(s)	207
BstYI	RGATCY	1 cut(s)	207
BstZI	CGGCCG	3 cut(s)	359, 452, 890
BsuI	GTATCC	1 cut(s)	277
BtgI	CCRYGG	2 cut(s)	449, 1002
BtrI	CACGTC	2 cut(s)	537, 820
BtsCI	GGATG	1 cut(s)	1063
Cac8I	GCNNGC	6 cut(s)	8, 330, 532, 580, 603, 1126
CaiI	CAGNNNCTG	2 cut(s)	865, 1172
CciI	TCATGA	1 cut(s)	792
CciNI	GCGGCCGC	1 cut(s)	359
CfoI	GCGC	7 cut(s)	330, 332, 343, 358, 552, 676, 995
Cfr10I	RCCGGY	3 cut(s)	530, 933, 1010
Cfr13I	GGNCC	5 cut(s)	19, 128, 643, 813, 1169
Cfr42I	CCGCGG	1 cut(s)	452
CseI	GACGC	2 cut(s)	571, 619
Csp6I	GTAC	3 cut(s)	587, 682, 868
CspAI	ACCGGT	1 cut(s)	933
CviAII	CATG	7 cut(s)	92, 787, 793, 1125, 1133, 1153, 1158
CviQI	GTAC	3 cut(s)	587, 682, 868
DdeI	CTNAG	4 cut(s)	57, 75, 146, 1094
DinI	GGCGCC	1 cut(s)	342
DpnI	GATC	8 cut(s)	209, 311, 383, 417, 437, 542, 767, 830
DpnII	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
DriI	GACNNNNNGTC	1 cut(s)	730
EaeI	YGGCCR	4 cut(s)	359, 452, 890, 926
EagI	CGGCCG	3 cut(s)	359, 452, 890
Eam1104I	CTCTTC	1 cut(s)	175
Eam1105I	GACNNNNNGTC	1 cut(s)	730
EarI	CTCTTC	1 cut(s)	175
EciI	GGCGGA	1 cut(s)	185
EclXI	CGGCCG	3 cut(s)	359, 452, 890
Eco130I	CCWWGG	1 cut(s)	297
Eco147I	AGGCCT	2 cut(s)	302, 578
Eco24I	GRGCYC	1 cut(s)	985
Eco47I	GGWCC	1 cut(s)	19
Eco52I	CGGCCG	3 cut(s)	359, 452, 890
Eco57I	CTGAAG	1 cut(s)	1022
Eco88I	CYCGRG	1 cut(s)	875
EcoO109I	RGGNCCY	1 cut(s)	1169
EcoRII	CCWGG	2 cut(s)	15, 1177
EcoT14I	CCWWGG	1 cut(s)	297
EcoT22I	ATGCAT	1 cut(s)	1130
EcoT38I	GRGCYC	1 cut(s)	985
EgeI	GGCGCC	1 cut(s)	342
EheI	GGCGCC	1 cut(s)	342
ErhI	CCWWGG	1 cut(s)	297
Esp3I	CGTCTC	1 cut(s)	380
FaeI	CATG	7 cut(s)	95, 790, 796, 1128, 1136, 1156, 1161
FaqI	GGGAC	1 cut(s)	305
FatI	CATG	7 cut(s)	91, 786, 792, 1124, 1132, 1152, 1157
FauI	CCCGC	3 cut(s)	330, 456, 503
FokI	GGATG	1 cut(s)	1050
FriOI	GRGCYC	1 cut(s)	985
FspBI	CTAG	1 cut(s)	425
GlaI	GCGC	7 cut(s)	329, 331, 342, 357, 551, 675, 994
GsaI	CCCAGC	1 cut(s)	1072
HaeII	RGCGCY	1 cut(s)	344
HapII	CCGG	7 cut(s)	71, 211, 531, 625, 646, 934, 1011
HgaI	GACGC	2 cut(s)	571, 619
HhaI	GCGC	7 cut(s)	330, 332, 343, 358, 552, 676, 995
Hin1I	GRCGYC	2 cut(s)	341, 611
Hin1II	CATG	7 cut(s)	95, 790, 796, 1128, 1136, 1156, 1161
Hin6I	GCGC	7 cut(s)	328, 330, 341, 356, 550, 674, 993
HinP1I	GCGC	7 cut(s)	328, 330, 341, 356, 550, 674, 993
HincII	GTYRAC	1 cut(s)	760
HindII	GTYRAC	1 cut(s)	760
HinfI	GANTC	8 cut(s)	49, 67, 95, 394, 704, 843, 971, 1088
HpaII	CCGG	7 cut(s)	71, 211, 531, 625, 646, 934, 1011
HphI	GGTGA	1 cut(s)	1148
Hpy166II	GTNNAC	4 cut(s)	741, 760, 784, 1139
Hpy188I	TCNGA	9 cut(s)	66, 271, 407, 635, 703, 828, 842, 848, 970
Hpy188III	TCNNGA	5 cut(s)	211, 313, 385, 793, 875
Hpy8I	GTNNAC	4 cut(s)	741, 760, 784, 1139
Hpy99I	CGWCG	8 cut(s)	107, 263, 290, 541, 587, 821, 898, 949
HpyAV	CCTTC	4 cut(s)	189, 469, 490, 996
HpyCH4III	ACNGT	2 cut(s)	319, 598
HpyCH4IV	ACGT	2 cut(s)	536, 819
HpyCH4V	TGCA	5 cut(s)	784, 808, 1124, 1128, 1166
HpyF3I	CTNAG	4 cut(s)	57, 75, 146, 1094
HpySE526I	ACGT	2 cut(s)	536, 819
Hsp92I	GRCGYC	2 cut(s)	341, 611
Hsp92II	CATG	7 cut(s)	95, 790, 796, 1128, 1136, 1156, 1161
HspAI	GCGC	7 cut(s)	328, 330, 341, 356, 550, 674, 993
KasI	GGCGCC	1 cut(s)	340
Kpn2I	TCCGGA	1 cut(s)	210
KroI	GCCGGC	1 cut(s)	530
KroNI	GCCGGC	1 cut(s)	532
KspI	CCGCGG	1 cut(s)	452
Kzo9I	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
LmnI	GCTCC	7 cut(s)	67, 160, 426, 433, 627, 904, 988
LweI	GCATC	2 cut(s)	1072, 1153
MaeI	CTAG	1 cut(s)	425
MaeII	ACGT	2 cut(s)	536, 819
MaeIII	GTNAC	1 cut(s)	656
MalI	GATC	8 cut(s)	209, 311, 383, 417, 437, 542, 767, 830
MbiI	CCGCTC	1 cut(s)	421
MboI	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
MboII	GAAGA	1 cut(s)	162
MflI	RGATCY	1 cut(s)	207
MhlI	GDGCHC	4 cut(s)	603, 786, 985, 1185
MluCI	AATT	3 cut(s)	241, 636, 1201
Mly113I	GGCGCC	1 cut(s)	341
MlyI	GAGTC	5 cut(s)	43, 61, 89, 698, 980
MmeI	TCCRAC	2 cut(s)	89, 681
Mph1103I	ATGCAT	1 cut(s)	1130
MroI	TCCGGA	1 cut(s)	210
MroNI	GCCGGC	1 cut(s)	530
MseI	TTAA	2 cut(s)	798, 1107
MslI	CAYNNNNRTG	1 cut(s)	791
MspA1I	CMGCKG	2 cut(s)	451, 910
MspI	CCGG	7 cut(s)	71, 211, 531, 625, 646, 934, 1011
MspR9I	CCNGG	2 cut(s)	17, 1179
Mva1269I	GAATGC	3 cut(s)	501, 693, 1128
MvaI	CCWGG	2 cut(s)	17, 1179
MvnI	CGCG	5 cut(s)	330, 358, 451, 550, 676
NaeI	GCCGGC	1 cut(s)	532
NarI	GGCGCC	1 cut(s)	341
NdeII	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
NgoMIV	GCCGGC	1 cut(s)	530
NlaIII	CATG	7 cut(s)	95, 790, 796, 1128, 1136, 1156, 1161
NlaIV	GGNNCC	5 cut(s)	63, 130, 342, 984, 1184
NmeAIII	GCCGAG	2 cut(s)	686, 868
NotI	GCGGCCGC	1 cut(s)	359
NsiI	ATGCAT	1 cut(s)	1130
NspI	RCATGY	2 cut(s)	790, 1128
PaeI	GCATGC	1 cut(s)	1128
PaeR7I	CTCGAG	1 cut(s)	875
PagI	TCATGA	1 cut(s)	792
PauI	GCGCGC	1 cut(s)	328
PceI	AGGCCT	2 cut(s)	302, 578
PciI	ACATGT	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	3 cut(s)	267, 403, 707
PctI	GAATGC	3 cut(s)	501, 693, 1128
PdiI	GCCGGC	1 cut(s)	532
PfeI	GAWTC	3 cut(s)	394, 843, 1088
PflMI	CCANNNNNTGG	1 cut(s)	670
PinAI	ACCGGT	1 cut(s)	933
PleI	GAGTC	5 cut(s)	43, 61, 89, 698, 979
PluTI	GGCGCC	1 cut(s)	344
PpsI	GAGTC	5 cut(s)	43, 61, 89, 698, 979
PscI	ACATGT	1 cut(s)	786
PshAI	GACNNNNGTC	1 cut(s)	755
Psp6I	CCWGG	2 cut(s)	15, 1177
PspFI	CCCAGC	1 cut(s)	1068
PspGI	CCWGG	2 cut(s)	15, 1177
PspN4I	GGNNCC	5 cut(s)	63, 130, 342, 984, 1184
PspPI	GGNCC	5 cut(s)	19, 128, 643, 813, 1169
PstNI	CAGNNNCTG	2 cut(s)	865, 1172
PsuI	RGATCY	1 cut(s)	207
PteI	GCGCGC	1 cut(s)	328
PvuII	CAGCTG	1 cut(s)	910
RsaI	GTAC	3 cut(s)	588, 683, 869
RsaNI	GTAC	3 cut(s)	587, 682, 868
RseI	CAYNNNNRTG	1 cut(s)	791
SacII	CCGCGG	1 cut(s)	452
SaqAI	TTAA	2 cut(s)	798, 1107
Sau3AI	GATC	8 cut(s)	207, 309, 381, 415, 435, 540, 765, 828
Sau96I	GGNCC	5 cut(s)	19, 128, 643, 813, 1169
SchI	GAGTC	5 cut(s)	43, 61, 89, 698, 980
ScrFI	CCNGG	2 cut(s)	17, 1179
SduI	GDGCHC	4 cut(s)	603, 786, 985, 1185
SfaNI	GCATC	2 cut(s)	1072, 1153
SfcI	CTRYAG	1 cut(s)	939
SfoI	GGCGCC	1 cut(s)	342
Sfr274I	CTCGAG	1 cut(s)	875
Sfr303I	CCGCGG	1 cut(s)	452
SgrBI	CCGCGG	1 cut(s)	452
SinI	GGWCC	1 cut(s)	19
SlaI	CTCGAG	1 cut(s)	875
SmiMI	CAYNNNNRTG	1 cut(s)	791
SmlI	CTYRAG	2 cut(s)	120, 875
SmoI	CTYRAG	2 cut(s)	120, 875
SphI	GCATGC	1 cut(s)	1128
Sse9I	AATT	3 cut(s)	241, 636, 1201
SseBI	AGGCCT	2 cut(s)	302, 578
SspDI	GGCGCC	1 cut(s)	340
SspMI	CTAG	1 cut(s)	425
StuI	AGGCCT	2 cut(s)	302, 578
StyD4I	CCNGG	2 cut(s)	15, 1177
StyI	CCWWGG	1 cut(s)	297
TaaI	ACNGT	2 cut(s)	319, 598
TaiI	ACGT	2 cut(s)	539, 822
TaqI	TCGA	6 cut(s)	102, 384, 438, 462, 539, 876
TasI	AATT	3 cut(s)	241, 636, 1201
TatI	WGTACW	1 cut(s)	867
TfiI	GAWTC	3 cut(s)	394, 843, 1088
Tru1I	TTAA	2 cut(s)	798, 1107
Tru9I	TTAA	2 cut(s)	798, 1107
TspDTI	ATGAA	3 cut(s)	544, 781, 1121
TspGWI	ACGGA	2 cut(s)	147, 420
Van91I	CCANNNNNTGG	1 cut(s)	670
VneI	GTGCAC	1 cut(s)	782
VpaK11BI	GGWCC	1 cut(s)	19
XapI	RAATTY	1 cut(s)	636
XceI	RCATGY	2 cut(s)	790, 1128
XhoI	CTCGAG	1 cut(s)	875
XspI	CTAG	1 cut(s)	425
Zsp2I	ATGCAT	1 cut(s)	1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.