Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0002916

Physical Location & Seq

Genomic Coordinates Reverse (-)

9511565 .. 9521821

Gene Structure 10257 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1108000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2820 bp

ATGGGCATGGCGGATTCGGAGGCGAAGCGTGCGGCGCAAGCGGAAGAAATGTTTCCGGATTTGCTGAAGAACTCGCCAAGTAATATCGCGAAATTGGAAGATGAGATTGGCAAGTGTAAGGGCCACCAGAAGTACTTAGCTCAGACTAGAAGCCCATCTGACGGCAGCGATGTCCGGTGGTACTTTTGCAAAGTTCCATTGGCGGAGAATGATGTGGCTGCTTCAGTCCCAAAGAGTGAGATGGTGGGGAAAGGCGAATATTTTCGGTTCGGTATGAGGGACTCTCTGGCAATCGAGGCATCGTTTTTGCAGAAGGAGGAAGAGTTGCTTTCTTGTTGGTGGAAGGAGTATGCAGAATGTAGCGAAGGCCCGAAAGAGCAACCTAGTTCGAGTAAGAAGGTGGATCAGCTGCAGAGTTCATTTTCTTTAGAAAGAGGCCGGTCAGTTGAGTTAAATCAAGTGGAAGAAGAGAGAGTTGGTGTCCCTGTTAAGGGAGGGCTTTATGAGGTAGATTTAGTGAAGCGACATTCTTTCCCTGTTTACTGGGATGGAGAAAACCGGCGTGTCTTAAGAGGTCACTGGTTTGCTCATAAAGGGGCTGATTGGCTCCCATTGCGTGAAGATGTTTCTGAACAGTTAGAGGTTGCATATCGTAGTCAGGTTTGGCACCGGAGAACGTTTCAGCCCTCTGGACTTTTTGCAGCTCGAGTTGAATTGCAAGGCGCTACACCTGGACTCCATGCGCTTTTCACAGGAGAAGATAACACTTGGGAGGCTTGGCTAAATATACACGCTTCTGGTTTTTCTAGTGTCATTTCTTTAGGTGGAAATGGAATGAAGTTAAGGCGTGGATATTCAGCATCTCACTCTTCGAAATTCACCCAGGAGGAATTGCGCCAGCAGAAGGAGGAGGAAAGGGATGATTATTGCTCACAGGTTCCTGTTCGACACCTTGTTTTCATGGTTCATGGAATTGGTCAAAGATTGGAGAAATCCAATTTAGTTGATGATGTAGCTAGTTTTCACCGTATAACAGCAAGTCTTGCTGAAACACATCTTACTTCACACCAACGTGACTCCCAAAGGGTTCTTTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTAAGTGGTGAAACTGCAGTCGAAAAATGTACTTTAGATGGTGTTAAGGGTTTGCGTGTCATGCTGAGTGCAACTGTTCATGATGTGTTATACTACATGAGTCCCATCTATTGTCAGGACATCATCGATGCGGTAGTATCCAACCAATTAAATCGGTTATATTTAAAATTTCTTCGGAGAAATTCAGGTTATGATGGAAAGGTTTCCATATTTGGCCATTCTTTGGGAAGTGTCCTCTCCTATGATATCCTTTGTCATCAGGAGAATTTTTCCTCCCTGTTTCCAATGGATTCGATGTTCAAAGAACATGCTAGAGACAGAGAACCTTCTCCTGATATCGACAATCAATCTACGTACAACACTCCGAGTAATTTGGGAGATGCAATCACTTTTGTAAATAATCAAACTGATGACATTATGGGTTCAATTGATGATGGAAGTATGAATGCACAACCACCTCTATTGATACATGAGGATGGAAATGCTGAAGATGCCTCGACTGTTGTTGGTTGCAACACATCAGATTCTAATGAGGTCATTGCACGGTCTGTGGACTCGAAACAAAAACATGGTGATACATTTGTCAATGAATCAGTTTGCCAAGCAAGCGACATGCTTAAATGGGATGGGTTGGATGAAACCGAAAGCATAAACTGTGGAGTCCCGGTTGTTGGTCCTGAGGATGTGGTTGAAGAAGTATGCAAAGAAACAAACAATAAAGATGAAGTAGTCAAATTGTTGAGGGAAGAGATTGATGCACACAAATCCAAAATAGCAGAATTGGAAGCCAAATGCCGTGATAGAGGTCATAGTCCAGGATTGCATCAAGAAAATGAAGAGGTTCTTGCAACTGTGGCAAAGCAACCCATTTATGAGGAATTGCCTGTTGTGCCAGATGGCTCACCCAAGAATCATACCCCTTATATCACATATACAAAACTTGAATTCAAGGTTGATACATTCTTTGCAGTTGGATCACCCCTTGGGGTTTTTCTTGCCCTTCGTAATATTCGTATTGGGATTGGAAAGGGGAAAGAATATTGGGAAGAGGAAAATATAAGTGAGGAGATGCCAGCTTGTCGGCAAATATTCAATATATTTCACCCCTTTGATCCTGTTGCATATAGAATAGAACCACTTGTATGTAAAGAATACATCGGCAAGCGGCCTGTTATCATACCCTATCACAAAGGTGGAAAGCGGATGCATATTGGATTTCAGGAATTTACTGAAGATTTAGCTGCTCGTTCTCAAGCAATAATGGATCGTCTAAACTTCGTAAAGGTTAAAGTGCTGACAGTTTGCCAGTCAAGAAGCTCGGACAACCTAGAAGCAGAAGAATCAGAAACAACCCAAGAAAAGGAAGTGAGATCATACGGTTCTCTTATGATGGAAAGAGTAACAGGAAGTAAAGAAGGCCGGATTGATCATGTGCTTCAAGATAAGACATTTCAACATCCGTATCTTGCTGCAATTGGAGCACATACAAACTATTGGAGGGATTATGATACTGCCCTTTTGATATTGAAACACTTGTACCGAGGAGTTCACCGAGGAGTTCACGATGAAAGCTTACATGAAGAATCTAGTAGGCGAAACTCAAAAACTGAGAGCGGTTTCACAGGTTGGTCTGATCAAAGAGAGACGGGAGAGGAGGAGCGTCCTTTGACATTCTCTGACAGAAGACGACGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005793 GO:0005794 GO:0005798 GO:0005801 GO:0005815 GO:0005829 GO:0005856 GO:0006810 GO:0006888 GO:0008150 GO:0012505 GO:0015630 GO:0016192 GO:0016298 GO:0016787 GO:0016788 GO:0030134 GO:0030135 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0052689 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDHD

Protein Analysis

940

Amino Acids

106.39

Weight (kDa)

5.56

Isoelectric Point (pI)

54.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDHD	PF02862	689 - 828	1.8e-33	DDHD domain
DDHD	PF02862	819 - 888	3.6e-11	DDHD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31480
fragaria_vesca	FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070
malus_domestica	MD08G1108000.v1.1 MD15G1088500.v1.1
prunus_persica	Prupe.1G442600_v2.0.a1
pyrus_communis	pycom08g09000 pycom15g08300
rosa_chinensis	RchiOBHm_Chr5g0047771 RchiOBHm_Chr6g0306901
rosa_laevigata	RLG00000010756
rosa_multiflora	Rmu_sc0019304.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161360
rosa_rugosa	Rorug01G0166300 Rorug01G0480900 Rorug01G0480900 Rorug01G0481000 Rorug01G0481100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354200
rosa_samantha	Rh5AG270400 Rh6AG465800 Rh6BG435000 Rh6CG480400 Rh6DG467300
rosa_wichuraiana	Rw6G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	666
AccB7I	CCANNNNNTGG	1 cut(s)	1348
AccBSI	CCGCTC	1 cut(s)	2739
AccII	CGCG	1 cut(s)	89
AccIII	TCCGGA	1 cut(s)	55
AciI	CCGC	8 cut(s)	11, 32, 41, 203, 1256, 2290, 2326, 2739
AclI	AACGTT	1 cut(s)	677
AclWI	GGATC	4 cut(s)	411, 2107, 2231, 2397
AcoI	YGGCCR	1 cut(s)	1339
AcsI	RAATTY	6 cut(s)	875, 1292, 1306, 1390, 2069, 2348
AcuI	CTGAAG	4 cut(s)	86, 207, 1632, 2376
AfaI	GTAC	5 cut(s)	134, 182, 1156, 1481, 2663
AfiI	CCNNNNNNNGG	7 cut(s)	161, 490, 491, 904, 1348, 1796, 2485
AflII	CTTAAG	1 cut(s)	568
AjnI	CCWGG	3 cut(s)	730, 882, 1939
AjuI	GAANNNNNNNTTGG	4 cut(s)	90, 122, 459, 491
AleI	CACNNNNGTG	2 cut(s)	1071, 2316
AloI	GAACNNNNNNTCC	2 cut(s)	1406, 1438
AluBI	AGCT	9 cut(s)	140, 409, 704, 1016, 1126, 2201, 2366, 2442, 2697
AluI	AGCT	9 cut(s)	140, 409, 704, 1016, 1126, 2201, 2366, 2442, 2697
Alw21I	GWGCWC	1 cut(s)	2608
Alw26I	GTCTC	2 cut(s)	1434, 2762
AlwI	GGATC	4 cut(s)	411, 2107, 2231, 2397
Ama87I	CYCGRG	1 cut(s)	705
Aor13HI	TCCGGA	1 cut(s)	55
AoxI	GGCC	6 cut(s)	121, 367, 436, 1339, 2291, 2542
ApeKI	GCWGC	6 cut(s)	165, 218, 409, 701, 2366, 2594
ApoI	RAATTY	6 cut(s)	875, 1292, 1306, 1390, 2069, 2348
Asp700I	GAANNNNTTC	4 cut(s)	51, 261, 1327, 1965
AspLEI	GCGC	4 cut(s)	37, 725, 745, 897
AspS9I	GGNCC	3 cut(s)	121, 368, 1799
AsuC2I	CCSGG	1 cut(s)	1790
AsuHPI	GGTGA	8 cut(s)	871, 1016, 1145, 1709, 2019, 2094, 2219, 2666
AsuII	TTCGAA	1 cut(s)	872
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	1 cut(s)	1799
AxyI	CCTNAGG	1 cut(s)	1803
BaeI	ACNNNNGTAYC	6 cut(s)	1692, 1725, 2570, 2603, 2645, 2678
BalI	TGGCCA	1 cut(s)	1341
BanI	GGYRCC	1 cut(s)	666
BbsI	GAAGAC	1 cut(s)	2815
Bbv12I	GWGCWC	1 cut(s)	2608
BbvI	GCAGC	6 cut(s)	177, 205, 396, 713, 2353, 2581
BceAI	ACGGC	2 cut(s)	178, 1905
BciT130I	CCWGG	3 cut(s)	732, 884, 1941
BciVI	GTATCC	1 cut(s)	1273
BclI	TGATCA	2 cut(s)	2551, 2758
BcnI	CCSGG	1 cut(s)	1790
BcoDI	GTCTC	2 cut(s)	1434, 2762
BfaI	CTAG	8 cut(s)	147, 384, 807, 1017, 1437, 2453, 2712, 2818
BfmI	CTRYAG	2 cut(s)	410, 1140
BfoI	RGCGCY	1 cut(s)	726
BfrI	CTTAAG	1 cut(s)	568
BfuI	GTATCC	1 cut(s)	1273
BisI	GCNGC	8 cut(s)	33, 166, 219, 410, 702, 2291, 2367, 2595
BlsI	GCNGC	8 cut(s)	34, 167, 220, 411, 703, 2292, 2368, 2596
BmcAI	AGTACT	1 cut(s)	134
Bme1390I	CCNGG	4 cut(s)	732, 884, 1790, 1941
Bme18I	GGWCC	1 cut(s)	1799
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	3 cut(s)	121, 368, 1799
BmiI	GGNNCC	3 cut(s)	608, 668, 939
BmrFI	CCNGG	4 cut(s)	732, 884, 1790, 1941
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	9 cut(s)	308, 869, 1243, 1495, 1606, 1870, 1957, 2184, 2319
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	1 cut(s)	2815
BplI	GAGNNNNNCTC	2 cut(s)	268, 300
Bpu14I	TTCGAA	1 cut(s)	872
BpuEI	CTTGAG	1 cut(s)	2361
BpuMI	CCSGG	1 cut(s)	1790
Bsa29I	ATCGAT	1 cut(s)	1251
BsaAI	YACGTR	1 cut(s)	1479
BsaJI	CCNNGG	4 cut(s)	882, 2107, 2665, 2677
BsaWI	WCCGGW	3 cut(s)	55, 174, 669
BsaXI	ACNNNNNCTCC	8 cut(s)	308, 338, 720, 750, 1102, 1132, 1776, 1806
Bsc4I	CCNNNNNNNGG	7 cut(s)	161, 490, 491, 904, 1348, 1796, 2485
Bse118I	RCCGGY	2 cut(s)	438, 558
Bse1I	ACTGG	4 cut(s)	548, 584, 1105, 2431
Bse21I	CCTNAGG	1 cut(s)	1803
Bse3DI	GCAATG	2 cut(s)	611, 1662
BseAI	TCCGGA	1 cut(s)	55
BseBI	CCWGG	3 cut(s)	732, 884, 1941
BseCI	ATCGAT	1 cut(s)	1251
BseDI	CCNNGG	4 cut(s)	882, 2107, 2665, 2677
BseGI	GGATG	8 cut(s)	553, 925, 1606, 1756, 1765, 1813, 2334, 2581
BseLI	CCNNNNNNNGG	7 cut(s)	161, 490, 491, 904, 1348, 1796, 2485
BseMI	GCAATG	2 cut(s)	611, 1662
BseMII	CTCAG	4 cut(s)	155, 1181, 1794, 2724
BseNI	ACTGG	4 cut(s)	548, 584, 1105, 2431
BseRI	GAGGAG	6 cut(s)	923, 2204, 2682, 2694, 2792, 2795
BseXI	GCAGC	6 cut(s)	177, 205, 396, 713, 2353, 2581
Bsh1236I	CGCG	1 cut(s)	89
BshFI	GGCC	6 cut(s)	123, 369, 438, 1341, 2293, 2544
BshNI	GGYRCC	1 cut(s)	666
BshVI	ATCGAT	1 cut(s)	1251
BsiHKAI	GWGCWC	1 cut(s)	2608
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	7 cut(s)	56, 175, 439, 559, 670, 1790, 2545
BslFI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1772
BslI	CCNNNNNNNGG	7 cut(s)	161, 490, 491, 904, 1348, 1796, 2485
BsmAI	GTCTC	2 cut(s)	1434, 2762
BsmBI	CGTCTC	1 cut(s)	2762
BsmFI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1772
BsmI	GAATGC	1 cut(s)	1576
BsnI	GGCC	6 cut(s)	123, 369, 438, 1341, 2293, 2544
BsoBI	CYCGRG	1 cut(s)	705
Bsp119I	TTCGAA	1 cut(s)	872
Bsp1286I	GDGCHC	1 cut(s)	2608
Bsp13I	TCCGGA	1 cut(s)	55
Bsp143I	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
Bsp68I	TCGCGA	1 cut(s)	89
BspACI	CCGC	8 cut(s)	11, 32, 41, 203, 1256, 2290, 2326, 2739
BspANI	GGCC	6 cut(s)	123, 369, 438, 1341, 2293, 2544
BspCNI	CTCAG	4 cut(s)	154, 1182, 1795, 2725
BspDI	ATCGAT	1 cut(s)	1251
BspEI	TCCGGA	1 cut(s)	55
BspFNI	CGCG	1 cut(s)	89
BspHI	TCATGA	1 cut(s)	1204
BspLI	GGNNCC	3 cut(s)	608, 668, 939
BspMAI	CTGCAG	2 cut(s)	414, 1144
BspPI	GGATC	4 cut(s)	411, 2107, 2231, 2397
BspT104I	TTCGAA	1 cut(s)	872
BspT107I	GGYRCC	1 cut(s)	666
BspTI	CTTAAG	1 cut(s)	568
BsrBI	CCGCTC	1 cut(s)	2739
BsrDI	GCAATG	2 cut(s)	611, 1662
BsrFI	RCCGGY	2 cut(s)	438, 558
BsrI	ACTGG	4 cut(s)	548, 584, 1105, 2431
BssAI	RCCGGY	2 cut(s)	438, 558
BssECI	CCNNGG	4 cut(s)	882, 2107, 2665, 2677
BssMI	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
BssT1I	CCWWGG	1 cut(s)	2107
Bst2UI	CCWGG	3 cut(s)	732, 884, 1941
Bst4CI	ACNGT	9 cut(s)	636, 1028, 1201, 1627, 1671, 1781, 1978, 2425, 2504
Bst6I	CTCTTC	6 cut(s)	315, 462, 874, 1866, 1956, 2166
BstAFI	CTTAAG	1 cut(s)	568
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstBAI	YACGTR	1 cut(s)	1479
BstBI	TTCGAA	1 cut(s)	872
BstC8I	GCNNGC	6 cut(s)	30, 39, 899, 1732, 2199, 2288
BstDEI	CTNAG	6 cut(s)	136, 141, 1127, 1190, 1803, 2733
BstF5I	GGATG	8 cut(s)	553, 925, 1606, 1756, 1765, 1813, 2334, 2581
BstFNI	CGCG	1 cut(s)	89
BstH2I	RGCGCY	1 cut(s)	726
BstHHI	GCGC	4 cut(s)	37, 725, 745, 897
BstKTI	GATC	7 cut(s)	406, 2102, 2239, 2392, 2498, 2554, 2761
BstMAI	GTCTC	2 cut(s)	1434, 2762
BstMBI	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
BstNI	CCWGG	3 cut(s)	732, 884, 1941
BstNSI	RCATGY	2 cut(s)	1436, 1741
BstSCI	CCNGG	4 cut(s)	730, 882, 1788, 1939
BstSFI	CTRYAG	2 cut(s)	410, 1140
BstSNI	TACGTA	1 cut(s)	1479
BstUI	CGCG	1 cut(s)	89
BstV1I	GCAGC	6 cut(s)	177, 205, 396, 713, 2353, 2581
BstV2I	GAAGAC	1 cut(s)	2815
BstXI	CCANNNNNNTGG	1 cut(s)	1107
Bsu15I	ATCGAT	1 cut(s)	1251
Bsu36I	CCTNAGG	1 cut(s)	1803
BsuI	GTATCC	1 cut(s)	1273
BsuRI	GGCC	6 cut(s)	123, 369, 438, 1341, 2293, 2544
BsuTUI	ATCGAT	1 cut(s)	1251
BtgZI	GCGATG	1 cut(s)	183
BtsCI	GGATG	8 cut(s)	553, 925, 1606, 1756, 1765, 1813, 2334, 2581
BtsIMutI	CAGTG	2 cut(s)	577, 1112
BtuMI	TCGCGA	1 cut(s)	89
Cac8I	GCNNGC	6 cut(s)	30, 39, 899, 1732, 2199, 2288
CciI	TCATGA	1 cut(s)	1204
CfoI	GCGC	4 cut(s)	37, 725, 745, 897
Cfr10I	RCCGGY	2 cut(s)	438, 558
Cfr13I	GGNCC	3 cut(s)	121, 368, 1799
ClaI	ATCGAT	1 cut(s)	1251
CseI	GACGC	1 cut(s)	2774
Csp6I	GTAC	5 cut(s)	133, 181, 1155, 1480, 2662
CspCI	CAANNNNNGTGG	2 cut(s)	1569, 1604
CviQI	GTAC	5 cut(s)	133, 181, 1155, 1480, 2662
DdeI	CTNAG	6 cut(s)	136, 141, 1127, 1190, 1803, 2733
DpnI	GATC	7 cut(s)	405, 2101, 2238, 2391, 2497, 2553, 2760
DpnII	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
DraI	TTTAAA	1 cut(s)	1290
EaeI	YGGCCR	1 cut(s)	1339
Eam1104I	CTCTTC	6 cut(s)	315, 462, 874, 1866, 1956, 2166
EarI	CTCTTC	6 cut(s)	315, 462, 874, 1866, 1956, 2166
EciI	GGCGGA	2 cut(s)	26, 218
Eco105I	TACGTA	1 cut(s)	1479
Eco130I	CCWWGG	1 cut(s)	2107
Eco32I	GATATC	2 cut(s)	1372, 1462
Eco47I	GGWCC	1 cut(s)	1799
Eco57I	CTGAAG	4 cut(s)	86, 207, 1632, 2376
Eco81I	CCTNAGG	1 cut(s)	1803
Eco88I	CYCGRG	1 cut(s)	705
EcoRI	GAATTC	1 cut(s)	2069
EcoRII	CCWGG	3 cut(s)	730, 882, 1939
EcoRV	GATATC	2 cut(s)	1372, 1462
EcoT14I	CCWWGG	1 cut(s)	2107
EcoT22I	ATGCAT	1 cut(s)	2334
ErhI	CCWWGG	1 cut(s)	2107
Esp3I	CGTCTC	1 cut(s)	2762
FalI	AAGNNNNNCTT	4 cut(s)	312, 344, 1953, 1985
FaqI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1772
FbaI	TGATCA	2 cut(s)	2551, 2758
Fnu4HI	GCNGC	8 cut(s)	33, 166, 219, 410, 702, 2291, 2367, 2595
FokI	GGATG	8 cut(s)	560, 932, 1613, 1763, 1772, 1820, 2341, 2568
Fsp4HI	GCNGC	8 cut(s)	33, 166, 219, 410, 702, 2291, 2367, 2595
FspBI	CTAG	8 cut(s)	147, 384, 807, 1017, 1437, 2453, 2712, 2818
GlaI	GCGC	4 cut(s)	36, 724, 744, 896
GluI	GCNGC	8 cut(s)	33, 166, 219, 410, 702, 2291, 2367, 2595
HaeII	RGCGCY	1 cut(s)	726
HaeIII	GGCC	6 cut(s)	123, 369, 438, 1341, 2293, 2544
HapII	CCGG	7 cut(s)	56, 175, 439, 559, 670, 1790, 2545
HgaI	GACGC	1 cut(s)	2774
HhaI	GCGC	4 cut(s)	37, 725, 745, 897
Hin6I	GCGC	4 cut(s)	35, 723, 743, 895
HinP1I	GCGC	4 cut(s)	35, 723, 743, 895
HindIII	AAGCTT	1 cut(s)	2695
HpaII	CCGG	7 cut(s)	56, 175, 439, 559, 670, 1790, 2545
HphI	GGTGA	8 cut(s)	871, 1016, 1145, 1709, 2019, 2094, 2219, 2666
Hpy166II	GTNNAC	4 cut(s)	541, 1678, 2674, 2686
Hpy8I	GTNNAC	4 cut(s)	541, 1678, 2674, 2686
Hpy99I	CGWCG	1 cut(s)	2817
HpyAV	CCTTC	8 cut(s)	307, 337, 359, 391, 898, 1461, 2135, 2534
HpyCH4III	ACNGT	9 cut(s)	636, 1028, 1201, 1627, 1671, 1781, 1978, 2425, 2504
HpyCH4IV	ACGT	3 cut(s)	677, 1072, 1478
HpyF3I	CTNAG	6 cut(s)	136, 141, 1127, 1190, 1803, 2733
HpySE526I	ACGT	3 cut(s)	677, 1072, 1478
HspAI	GCGC	4 cut(s)	35, 723, 743, 895
Kpn2I	TCCGGA	1 cut(s)	55
Ksp22I	TGATCA	2 cut(s)	2551, 2758
Kzo9I	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
LmnI	GCTCC	3 cut(s)	612, 2603, 2782
Lsp1109I	GCAGC	6 cut(s)	177, 205, 396, 713, 2353, 2581
LweI	GCATC	9 cut(s)	308, 869, 1243, 1495, 1606, 1870, 1957, 2184, 2319
MaeI	CTAG	8 cut(s)	147, 384, 807, 1017, 1437, 2453, 2712, 2818
MaeII	ACGT	3 cut(s)	677, 1072, 1478
MaeIII	GTNAC	3 cut(s)	575, 1073, 2524
MalI	GATC	7 cut(s)	405, 2101, 2238, 2391, 2497, 2553, 2760
MbiI	CCGCTC	1 cut(s)	2739
MboI	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
MfeI	CAATTG	2 cut(s)	1551, 2598
MhlI	GDGCHC	1 cut(s)	2608
MlsI	TGGCCA	1 cut(s)	1341
MluNI	TGGCCA	1 cut(s)	1341
MlyI	GAGTC	6 cut(s)	275, 729, 1070, 1234, 1673, 1794
MmeI	TCCRAC	3 cut(s)	1290, 1737, 2077
Mox20I	TGGCCA	1 cut(s)	1341
Mph1103I	ATGCAT	1 cut(s)	2334
MroI	TCCGGA	1 cut(s)	55
MroXI	GAANNNNTTC	4 cut(s)	51, 261, 1327, 1965
MscI	TGGCCA	1 cut(s)	1341
MseI	TTAA	9 cut(s)	452, 489, 569, 842, 1170, 1274, 1289, 1743, 2412
MslI	CAYNNNNRTG	5 cut(s)	1071, 1105, 1599, 2266, 2316
Msp20I	TGGCCA	1 cut(s)	1341
MspA1I	CMGCKG	1 cut(s)	409
MspCI	CTTAAG	1 cut(s)	568
MspI	CCGG	7 cut(s)	56, 175, 439, 559, 670, 1790, 2545
MspR9I	CCNGG	4 cut(s)	732, 884, 1790, 1941
MunI	CAATTG	2 cut(s)	1551, 2598
Mva1269I	GAATGC	1 cut(s)	1576
MvaI	CCWGG	3 cut(s)	732, 884, 1941
MvnI	CGCG	1 cut(s)	89
NciI	CCSGG	1 cut(s)	1790
NdeII	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
NlaIV	GGNNCC	3 cut(s)	608, 668, 939
NmuCI	GTSAC	2 cut(s)	575, 1073
NruI	TCGCGA	1 cut(s)	89
NsiI	ATGCAT	1 cut(s)	2334
NspI	RCATGY	2 cut(s)	1436, 1741
NspV	TTCGAA	1 cut(s)	872
OliI	CACNNNNGTG	2 cut(s)	1071, 2316
PaeR7I	CTCGAG	1 cut(s)	705
PagI	TCATGA	1 cut(s)	1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	2134
PctI	GAATGC	1 cut(s)	1576
PdmI	GAANNNNTTC	4 cut(s)	51, 261, 1327, 1965
PfeI	GAWTC	7 cut(s)	14, 1415, 1649, 1715, 2035, 2465, 2708
PflMI	CCANNNNNTGG	1 cut(s)	1348
PfoI	TCCNGGA	1 cut(s)	1939
PkrI	GCNGC	8 cut(s)	34, 167, 220, 411, 703, 2292, 2368, 2596
PleI	GAGTC	6 cut(s)	275, 729, 1070, 1233, 1673, 1793
PpsI	GAGTC	6 cut(s)	275, 729, 1070, 1233, 1673, 1793
Ppu21I	YACGTR	1 cut(s)	1479
Psp1406I	AACGTT	1 cut(s)	677
Psp6I	CCWGG	3 cut(s)	730, 882, 1939
PspGI	CCWGG	3 cut(s)	730, 882, 1939
PspN4I	GGNNCC	3 cut(s)	608, 668, 939
PspPI	GGNCC	3 cut(s)	121, 368, 1799
PspXI	VCTCGAGB	1 cut(s)	705
PstI	CTGCAG	2 cut(s)	414, 1144
PvuII	CAGCTG	1 cut(s)	409
RruI	TCGCGA	1 cut(s)	89
RsaI	GTAC	5 cut(s)	134, 182, 1156, 1481, 2663
RsaNI	GTAC	5 cut(s)	133, 181, 1155, 1480, 2662
RseI	CAYNNNNRTG	5 cut(s)	1071, 1105, 1599, 2266, 2316
SaqAI	TTAA	9 cut(s)	452, 489, 569, 842, 1170, 1274, 1289, 1743, 2412
SatI	GCNGC	8 cut(s)	33, 166, 219, 410, 702, 2291, 2367, 2595
Sau3AI	GATC	7 cut(s)	403, 2099, 2236, 2389, 2495, 2551, 2758
Sau96I	GGNCC	3 cut(s)	121, 368, 1799
ScaI	AGTACT	1 cut(s)	134
SchI	GAGTC	6 cut(s)	275, 729, 1070, 1234, 1673, 1794
ScrFI	CCNGG	4 cut(s)	732, 884, 1790, 1941
SduI	GDGCHC	1 cut(s)	2608
SfaNI	GCATC	9 cut(s)	308, 869, 1243, 1495, 1606, 1870, 1957, 2184, 2319
SfcI	CTRYAG	2 cut(s)	410, 1140
Sfr274I	CTCGAG	1 cut(s)	705
SfuI	TTCGAA	1 cut(s)	872
SinI	GGWCC	1 cut(s)	1799
SlaI	CTCGAG	1 cut(s)	705
SmiMI	CAYNNNNRTG	5 cut(s)	1071, 1105, 1599, 2266, 2316
SmlI	CTYRAG	3 cut(s)	568, 705, 2376
SmoI	CTYRAG	3 cut(s)	568, 705, 2376
SnaBI	TACGTA	1 cut(s)	1479
SsiI	CCGC	8 cut(s)	11, 32, 41, 203, 1256, 2290, 2326, 2739
SspI	AATATT	4 cut(s)	260, 2134, 2165, 2214
SspMI	CTAG	8 cut(s)	147, 384, 807, 1017, 1437, 2453, 2712, 2818
StyD4I	CCNGG	4 cut(s)	730, 882, 1788, 1939
StyI	CCWWGG	1 cut(s)	2107
TaaI	ACNGT	9 cut(s)	636, 1028, 1201, 1627, 1671, 1781, 1978, 2425, 2504
TaiI	ACGT	3 cut(s)	680, 1075, 1481
TatI	WGTACW	2 cut(s)	132, 1154
TauI	GCSGC	2 cut(s)	35, 2293
TfiI	GAWTC	7 cut(s)	14, 1415, 1649, 1715, 2035, 2465, 2708
Tru1I	TTAA	9 cut(s)	452, 489, 569, 842, 1170, 1274, 1289, 1743, 2412
Tru9I	TTAA	9 cut(s)	452, 489, 569, 842, 1170, 1274, 1289, 1743, 2412
TscAI	CASTG	2 cut(s)	584, 1112
TseFI	GTSAC	2 cut(s)	575, 1073
TseI	GCWGC	6 cut(s)	165, 218, 409, 701, 2366, 2594
Tsp45I	GTSAC	2 cut(s)	575, 1073
TspGWI	ACGGA	1 cut(s)	2574
TspRI	CASTG	2 cut(s)	584, 1112
Van91I	CCANNNNNTGG	1 cut(s)	1348
Vha464I	CTTAAG	1 cut(s)	568
VpaK11BI	GGWCC	1 cut(s)	1799
XapI	RAATTY	6 cut(s)	875, 1292, 1306, 1390, 2069, 2348
XceI	RCATGY	2 cut(s)	1436, 1741
XhoI	CTCGAG	1 cut(s)	705
XmnI	GAANNNNTTC	4 cut(s)	51, 261, 1327, 1965
XspI	CTAG	8 cut(s)	147, 384, 807, 1017, 1437, 2453, 2712, 2818
ZrmI	AGTACT	1 cut(s)	134
Zsp2I	ATGCAT	1 cut(s)	2334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.