Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002916

Physical Location & Seq

Genomic Coordinates Reverse (-)

65513563 .. 65523425

Gene Structure 9863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG435000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGAGGGACTCTCTGGCAATCGAGGCCTCGTTTTTGCAGAGGGAGGAAGAGTTGCTTTCTTGTTGGTGGAGAGAGTATGCAGAATGCAGTGAAGGTCCGAAAGAGCGGCCTAGTTCCAGTAAGAAAGTGGATGAGAAGGCTCGTTCGGTTCCGTTGTATGAAGAGGAAGAAGAGAGAGTTGGTGTCCCTGTTAAGGGAGGGCTTTATGAAGTAGATTTAGTGAAGCGGCATTGTTTCCCTGTATATTGGGATGGAGAAAACCGGCGTGTCTTAAGAGGCCACTGGTTTGCTCGTAAAGGGGTTGATTGGCTGCCACTTCGTGAAAATGTTGCTGAACAATTGGAGATCGCATATCGCAGCCAGGTTTGGCATCGGAGAACTTTTCAGCCCTCTGGACTTTTTGCAGCTCGAGTTGATTTGCAAGGCTCTATCTATGGATTGCATGTGCTTTTCACTGGAGAAGATAATACTTGGGAGGCTTGGCTCAATGCAGATGCTTCTGGTTTTTCTAATGTCATTTCTTTCAGCGGAAATGGAATTAAGTTACGGCGTGGATATTCTGCATCTCACTCTCCAAAACCCACTCAGAATGAATTACGTCAGCAGAAGGAGGAGAAAATGGATGATTATTGTTCAAAGGTTCCTGTTCGACATCTTGTGTTCATGGTTCATGGTATTGGTCAAAGATTGGAAAAATCCAATTTGGTTGATGACGTCGGTCATTTTCACCATATAACAGCAAGTCTTGCCGAAACACACCTTACTTCACTCCAACGTGATACTCAGAGGGTTCTTTTCATACCATGCCAGTGGAGAAAGGGTTTGAAGCTTAGTGGTGAAACTGCAGTGGAAAAATGTACTTTAGACGGTGTGAAGGGTTTGCGTGTCATGCTGAGTGCGACTGTTCATGATGTGTTATACTACATGAGCCCCATATATTGTCAGGACATCATTAACTCGGTATCCAACCAATTAAATCTGTTGTATTTAAAATTTCTTAGGAGGAACCCAGGTTATGATGGAAAGGTTTCCATATATGGTCATTCTTTGGGAAGTGTCCTCTCTTATGATATCCTTTGTCATCAAGAGAATTTGTCCTCCCCATTTCCAATGGATTGGATGTACAAAGAACATGCTAGAAATGAAGAATCTTCTCCTGATATGAACAACCAATCACCGACCGATGACTCTCTTACTAATTTGGGAGATGCAGTCTCTTTTGTATATAATCAAACTGATGACATGGGTTCAATTCTTGAAGGAAAATTGAATGCACAACCAACTCTATTAATGCATGAGGAGGGAAATGCTGTAGATGTGTGTAGTGTTGCGAGTTGTGAGACATCAGATTTGAATGAGTTTAATGCAAGGTCTATGGACTCGAAACAAATGCAGGGTAACAATTACGTGCACGAATCAGTTTGTGAAGCTAGCGACAAGTTTAAACAGGATATCTTGGATGAAACTACTAGAATGGAATGTGGAGTCCCAGTTGATCACATAGAGAAAGTGGTTCAAGAAGTATGTGAAGAAACGAGCAATAAAGACGAAGTAGTCAAATCGCTGAGGGAGGAGATTGATTCTCTAAAAGCCAAAATAGCAGAACTGGAAACCAAATGTGGTGGTAGAGATGGTAGTCCAGAAAATGAAGAGGTTCTTGCAACTACGCCACAGAGATCCATATCGGAGAAATTGCCTCCTAGGCAAGAGGGCTCAACTCAGAGTTATACCCCTTATATCAAATACACGAAACTTGAATTCAAGGTTGATACATTTTTTGCAGTTGGATCACCCCTTGGGGTCTTCCTGGCCCTTCGTAATATTCGTATTGGAATTGGCAAGGGGAAAGACTATTGGGAAGAGGAAAATATAAGTGAGGAGATGCCAGCTTGTCAGCAAATGTTCAACATATTTCACCCCTTTGATCCTGTTGCATATAGAATAGAGCCACTTGTGTGTAAAGAATACCTCGGCAAGCGACCTGTTATCATACCCTACCACAAAGGTGGAAAGAGGTTACATATTGGATTTCAGGAATTTACTGAAGATTTAGCTGCTCGTTCTCAAGCAATAATGGATCATCTAAACTTCGTAAAAGTTAAAGTTCTGACAGTTTGCCAGTCAAGAAACACGGATATCCTAGAAGAAGCAGCAGAAAATGCTGAAGAACGAGAGGAGAGATCATATGGTACTCTTATGATGGAAAGGATAACTGGAAGTGAAGAAGGACGGATAGATCATGTGCTTCAAGTGTGTATCCGAGCACCCATTCACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005793 GO:0005794 GO:0005798 GO:0005801 GO:0005815 GO:0005829 GO:0005856 GO:0006810 GO:0006888 GO:0008150 GO:0012505 GO:0015630 GO:0016192 GO:0016298 GO:0016787 GO:0016788 GO:0030134 GO:0030135 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0052689 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDHD

Protein Analysis

759

Amino Acids

86.43

Weight (kDa)

5.38

Isoelectric Point (pI)

56.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDHD	PF02862	585 - 720	7.6e-33	DDHD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31480
fragaria_vesca	FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070
malus_domestica	MD08G1108000.v1.1 MD15G1088500.v1.1
prunus_persica	Prupe.1G442600_v2.0.a1
pyrus_communis	pycom08g09000 pycom15g08300
rosa_chinensis	RchiOBHm_Chr5g0047771 RchiOBHm_Chr6g0306901
rosa_laevigata	RLG00000010756
rosa_multiflora	Rmu_sc0019304.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161360
rosa_rugosa	Rorug01G0166300 Rorug01G0480900 Rorug01G0480900 Rorug01G0481000 Rorug01G0481100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354200
rosa_samantha	Rh5AG270400 Rh6AG465800 Rh6BG435000 Rh6CG480400 Rh6DG467300
rosa_wichuraiana	Rw6G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1553
AatII	GACGTC	1 cut(s)	717
AccBSI	CCGCTC	1 cut(s)	106
AciI	CCGC	3 cut(s)	106, 226, 528
AclWI	GGATC	4 cut(s)	1671, 1795, 1919, 2085
AcsI	RAATTY	4 cut(s)	992, 1090, 1757, 2036
AcuI	CTGAAG	2 cut(s)	2064, 2184
AcyI	GRCGYC	1 cut(s)	714
AdeI	CACNNNGTG	1 cut(s)	320
AfaI	GTAC	3 cut(s)	859, 1124, 2191
AfiI	CCNNNNNNNGG	2 cut(s)	193, 194
AflII	CTTAAG	1 cut(s)	271
AjnI	CCWGG	3 cut(s)	360, 1009, 1806
AjuI	GAANNNNNNNTTGG	2 cut(s)	162, 194
AleI	CACNNNNGTG	2 cut(s)	1954, 2004
AluBI	AGCT	5 cut(s)	407, 829, 1430, 1889, 2054
AluI	AGCT	5 cut(s)	407, 829, 1430, 1889, 2054
Alw21I	GWGCWC	2 cut(s)	1413, 2266
Alw26I	GTCTC	2 cut(s)	1219, 1334
Alw44I	GTGCAC	1 cut(s)	1409
AlwI	GGATC	4 cut(s)	1671, 1795, 1919, 2085
Ama87I	CYCGRG	1 cut(s)	408
AoxI	GGCC	4 cut(s)	24, 107, 277, 1809
ApaLI	GTGCAC	1 cut(s)	1409
ApeKI	GCWGC	5 cut(s)	310, 357, 404, 2054, 2150
ApoI	RAATTY	4 cut(s)	992, 1090, 1757, 2036
ArsI	GACNNNNNNTTYG	2 cut(s)	1333, 1365
AseI	ATTAAT	1 cut(s)	1289
Asp700I	GAANNNNTTC	2 cut(s)	1027, 1653
AspA2I	CCTAGG	1 cut(s)	1700
AspS9I	GGNCC	2 cut(s)	95, 1810
AsuHPI	GGTGA	5 cut(s)	719, 848, 1167, 1782, 1907
AsuNHI	GCTAGC	1 cut(s)	1430
AvaI	CYCGRG	1 cut(s)	408
AvaII	GGWCC	1 cut(s)	95
AvrII	CCTAGG	1 cut(s)	1700
BaeGI	GKGCMC	1 cut(s)	1413
BanII	GRGCYC	2 cut(s)	932, 1715
BbsI	GAAGAC	1 cut(s)	1795
Bbv12I	GWGCWC	2 cut(s)	1413, 2266
BbvCI	CCTCAGC	1 cut(s)	1565
BbvI	GCAGC	5 cut(s)	297, 369, 416, 2041, 2162
BccI	CCATC	4 cut(s)	245, 1013, 1625, 2194
BceAI	ACGGC	1 cut(s)	563
BcgI	CGANNNNNNTGC	2 cut(s)	1372, 1406
BciT130I	CCWGG	3 cut(s)	362, 1011, 1808
BciVI	GTATCC	2 cut(s)	973, 2267
BclI	TGATCA	1 cut(s)	1495
BcoDI	GTCTC	2 cut(s)	1219, 1334
BfaI	CTAG	6 cut(s)	111, 1137, 1431, 1470, 1701, 2141
BfmI	CTRYAG	2 cut(s)	843, 1311
BfrI	CTTAAG	1 cut(s)	271
BfuI	GTATCC	2 cut(s)	973, 2267
BglI	GCCNNNNNGGC	1 cut(s)	1702
BisI	GCNGC	7 cut(s)	107, 227, 311, 358, 405, 2055, 2151
BlnI	CCTAGG	1 cut(s)	1700
BlsI	GCNGC	7 cut(s)	108, 228, 312, 359, 406, 2056, 2152
Bme1390I	CCNGG	3 cut(s)	362, 1011, 1808
Bme18I	GGWCC	1 cut(s)	95
BmeT110I	CYCGRG	1 cut(s)	408
BmgT120I	GGNCC	2 cut(s)	95, 1810
BmiI	GGNNCC	3 cut(s)	150, 642, 1007
BmrFI	CCNGG	3 cut(s)	362, 1011, 1808
BmrI	ACTGGG	1 cut(s)	1484
BmsI	GCATC	5 cut(s)	379, 484, 572, 1198, 1872
BmtI	GCTAGC	1 cut(s)	1434
BmuI	ACTGGG	1 cut(s)	1484
BoxI	GACNNNNGTC	1 cut(s)	717
BpiI	GAAGAC	1 cut(s)	1795
BplI	GAGNNNNNCTC	1 cut(s)	27
BpmI	CTGGAG	1 cut(s)	477
Bpu10I	CCTNAGC	1 cut(s)	1565
BpuEI	CTTGAG	1 cut(s)	2049
BsaAI	YACGTR	1 cut(s)	1408
BsaBI	GATNNNNATC	1 cut(s)	1681
BsaHI	GRCGYC	1 cut(s)	714
BsaJI	CCNNGG	4 cut(s)	1009, 1700, 1795, 1969
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 65, 805, 835, 1197, 1227, 1476, 1506
Bsc4I	CCNNNNNNNGG	2 cut(s)	193, 194
Bse118I	RCCGGY	1 cut(s)	261
Bse1I	ACTGG	8 cut(s)	117, 287, 460, 808, 1490, 1611, 2119, 2218
Bse8I	GATNNNNATC	1 cut(s)	1681
BseBI	CCWGG	3 cut(s)	362, 1011, 1808
BseDI	CCNNGG	4 cut(s)	1009, 1700, 1795, 1969
BseGI	GGATG	5 cut(s)	136, 256, 628, 1125, 1465
BseJI	GATNNNNATC	1 cut(s)	1681
BseLI	CCNNNNNNNGG	2 cut(s)	193, 194
BseMII	CTCAG	5 cut(s)	599, 797, 884, 1556, 1733
BseNI	ACTGG	8 cut(s)	117, 287, 460, 808, 1490, 1611, 2119, 2218
BseRI	GAGGAG	5 cut(s)	626, 1313, 1586, 1892, 2189
BseSI	GKGCMC	1 cut(s)	1413
BseXI	GCAGC	5 cut(s)	297, 369, 416, 2041, 2162
Bsh1285I	CGRYCG	1 cut(s)	1182
BshFI	GGCC	4 cut(s)	26, 109, 279, 1811
BsiEI	CGRYCG	1 cut(s)	1182
BsiHKAI	GWGCWC	2 cut(s)	1413, 2266
BsiHKCI	CYCGRG	1 cut(s)	408
BsiSI	CCGG	1 cut(s)	262
BslFI	GGGAC	3 cut(s)	20, 170, 1472
BslI	CCNNNNNNNGG	2 cut(s)	193, 194
BsmAI	GTCTC	2 cut(s)	1219, 1334
BsmFI	GGGAC	3 cut(s)	20, 170, 1472
BsmI	GAATGC	2 cut(s)	89, 1276
BsnI	GGCC	4 cut(s)	26, 109, 279, 1811
BsoBI	CYCGRG	1 cut(s)	408
Bsp1286I	GDGCHC	4 cut(s)	932, 1413, 1715, 2266
Bsp1407I	TGTACA	1 cut(s)	1122
Bsp143I	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
BspACI	CCGC	3 cut(s)	106, 226, 528
BspANI	GGCC	4 cut(s)	26, 109, 279, 1811
BspCNI	CTCAG	5 cut(s)	598, 796, 885, 1557, 1732
BspHI	TCATGA	1 cut(s)	907
BspLI	GGNNCC	3 cut(s)	150, 642, 1007
BspMAI	CTGCAG	1 cut(s)	847
BspOI	GCTAGC	1 cut(s)	1434
BspPI	GGATC	4 cut(s)	1671, 1795, 1919, 2085
BspTI	CTTAAG	1 cut(s)	271
BsrBI	CCGCTC	1 cut(s)	106
BsrFI	RCCGGY	1 cut(s)	261
BsrGI	TGTACA	1 cut(s)	1122
BsrI	ACTGG	8 cut(s)	117, 287, 460, 808, 1490, 1611, 2119, 2218
BssAI	RCCGGY	1 cut(s)	261
BssECI	CCNNGG	4 cut(s)	1009, 1700, 1795, 1969
BssMI	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
BssNI	GRCGYC	1 cut(s)	714
BssT1I	CCWWGG	2 cut(s)	1700, 1795
Bst2UI	CCWGG	3 cut(s)	362, 1011, 1808
Bst4CI	ACNGT	3 cut(s)	869, 904, 2113
Bst6I	CTCTTC	5 cut(s)	42, 156, 165, 1644, 1854
BstACI	GRCGYC	1 cut(s)	714
BstAFI	CTTAAG	1 cut(s)	271
BstAPI	GCANNNNNTGC	2 cut(s)	746, 2159
BstAUI	TGTACA	1 cut(s)	1122
BstBAI	YACGTR	1 cut(s)	1408
BstC8I	GCNNGC	3 cut(s)	1432, 1887, 1976
BstDEI	CTNAG	7 cut(s)	585, 783, 830, 893, 998, 1565, 1719
BstF5I	GGATG	5 cut(s)	136, 256, 628, 1125, 1465
BstKTI	GATC	8 cut(s)	348, 1498, 1679, 1790, 1927, 2080, 2183, 2239
BstMAI	GTCTC	2 cut(s)	1219, 1334
BstMBI	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
BstMCI	CGRYCG	1 cut(s)	1182
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 746, 889, 1598, 1702, 2159
BstNI	CCWGG	3 cut(s)	362, 1011, 1808
BstNSI	RCATGY	2 cut(s)	446, 1136
BstPAI	GACNNNNGTC	1 cut(s)	717
BstSCI	CCNGG	3 cut(s)	360, 1009, 1806
BstSFI	CTRYAG	2 cut(s)	843, 1311
BstSLI	GKGCMC	1 cut(s)	1413
BstV1I	GCAGC	5 cut(s)	297, 369, 416, 2041, 2162
BstV2I	GAAGAC	1 cut(s)	1795
BstX2I	RGATCY	1 cut(s)	1676
BstXI	CCANNNNNNTGG	3 cut(s)	810, 1116, 2006
BstYI	RGATCY	1 cut(s)	1676
BsuI	GTATCC	2 cut(s)	973, 2267
BsuRI	GGCC	4 cut(s)	26, 109, 279, 1811
BtsCI	GGATG	5 cut(s)	136, 256, 628, 1125, 1465
BtsI	GCAGTG	2 cut(s)	94, 852
BtsIMutI	CAGTG	5 cut(s)	94, 280, 453, 815, 852
Cac8I	GCNNGC	3 cut(s)	1432, 1887, 1976
CciI	TCATGA	1 cut(s)	907
Cfr10I	RCCGGY	1 cut(s)	261
Cfr13I	GGNCC	2 cut(s)	95, 1810
Csp6I	GTAC	3 cut(s)	858, 1123, 2190
CspCI	CAANNNNNGTGG	2 cut(s)	1603, 1638
CviQI	GTAC	3 cut(s)	858, 1123, 2190
DdeI	CTNAG	7 cut(s)	585, 783, 830, 893, 998, 1565, 1719
DpnI	GATC	8 cut(s)	347, 1497, 1678, 1789, 1926, 2079, 2182, 2238
DpnII	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
DraI	TTTAAA	2 cut(s)	990, 1444
DraIII	CACNNNGTG	1 cut(s)	320
DrdI	GACNNNNNNGTC	1 cut(s)	1553
DseDI	GACNNNNNNGTC	1 cut(s)	1553
Eam1104I	CTCTTC	5 cut(s)	42, 156, 165, 1644, 1854
EarI	CTCTTC	5 cut(s)	42, 156, 165, 1644, 1854
Eco130I	CCWWGG	2 cut(s)	1700, 1795
Eco147I	AGGCCT	1 cut(s)	26
Eco24I	GRGCYC	2 cut(s)	932, 1715
Eco32I	GATATC	3 cut(s)	1072, 1453, 2137
Eco47I	GGWCC	1 cut(s)	95
Eco57I	CTGAAG	2 cut(s)	2064, 2184
Eco88I	CYCGRG	1 cut(s)	408
EcoRI	GAATTC	1 cut(s)	1757
EcoRII	CCWGG	3 cut(s)	360, 1009, 1806
EcoRV	GATATC	3 cut(s)	1072, 1453, 2137
EcoT14I	CCWWGG	2 cut(s)	1700, 1795
EcoT22I	ATGCAT	1 cut(s)	1296
EcoT38I	GRGCYC	2 cut(s)	932, 1715
ErhI	CCWWGG	2 cut(s)	1700, 1795
FalI	AAGNNNNNCTT	4 cut(s)	39, 71, 1641, 1673
FaqI	GGGAC	3 cut(s)	20, 170, 1472
FauNDI	CATATG	1 cut(s)	2185
FbaI	TGATCA	1 cut(s)	1495
Fnu4HI	GCNGC	7 cut(s)	107, 227, 311, 358, 405, 2055, 2151
FokI	GGATG	5 cut(s)	143, 263, 635, 1132, 1472
FriOI	GRGCYC	2 cut(s)	932, 1715
Fsp4HI	GCNGC	7 cut(s)	107, 227, 311, 358, 405, 2055, 2151
FspBI	CTAG	6 cut(s)	111, 1137, 1431, 1470, 1701, 2141
GluI	GCNGC	7 cut(s)	107, 227, 311, 358, 405, 2055, 2151
GsuI	CTGGAG	1 cut(s)	477
HaeIII	GGCC	4 cut(s)	26, 109, 279, 1811
HapII	CCGG	1 cut(s)	262
Hin1I	GRCGYC	1 cut(s)	714
HindIII	AAGCTT	1 cut(s)	827
HinfI	GANTC	7 cut(s)	8, 1148, 1187, 1379, 1415, 1485, 1580
HpaII	CCGG	1 cut(s)	262
HphI	GGTGA	5 cut(s)	719, 848, 1167, 1782, 1907
Hpy166II	GTNNAC	1 cut(s)	1411
Hpy188I	TCNGA	9 cut(s)	99, 375, 588, 786, 1348, 1687, 1722, 2109, 2261
Hpy8I	GTNNAC	1 cut(s)	1411
Hpy99I	CGWCG	1 cut(s)	719
HpyAV	CCTTC	7 cut(s)	86, 130, 601, 868, 1253, 1823, 2219
HpyCH4III	ACNGT	3 cut(s)	869, 904, 2113
HpyCH4IV	ACGT	4 cut(s)	598, 714, 775, 1407
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 746, 889, 1598, 1702, 2159
HpyF3I	CTNAG	7 cut(s)	585, 783, 830, 893, 998, 1565, 1719
HpySE526I	ACGT	4 cut(s)	598, 714, 775, 1407
Hsp92I	GRCGYC	1 cut(s)	714
Ksp22I	TGATCA	1 cut(s)	1495
Kzo9I	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
Lsp1109I	GCAGC	5 cut(s)	297, 369, 416, 2041, 2162
LweI	GCATC	5 cut(s)	379, 484, 572, 1198, 1872
MaeI	CTAG	6 cut(s)	111, 1137, 1431, 1470, 1701, 2141
MaeII	ACGT	4 cut(s)	598, 714, 775, 1407
MaeIII	GTNAC	3 cut(s)	543, 1397, 2016
MalI	GATC	8 cut(s)	347, 1497, 1678, 1789, 1926, 2079, 2182, 2238
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
MfeI	CAATTG	1 cut(s)	338
MflI	RGATCY	1 cut(s)	1676
MhlI	GDGCHC	4 cut(s)	932, 1413, 1715, 2266
MlyI	GAGTC	4 cut(s)	2, 1181, 1373, 1494
MmeI	TCCRAC	3 cut(s)	796, 990, 1765
Mph1103I	ATGCAT	1 cut(s)	1296
MroXI	GAANNNNTTC	2 cut(s)	1027, 1653
MslI	CAYNNNNRTG	3 cut(s)	808, 1954, 2004
MspA1I	CMGCKG	1 cut(s)	528
MspCI	CTTAAG	1 cut(s)	271
MspI	CCGG	1 cut(s)	262
MspR9I	CCNGG	3 cut(s)	362, 1011, 1808
MssI	GTTTAAAC	1 cut(s)	1444
MunI	CAATTG	1 cut(s)	338
Mva1269I	GAATGC	2 cut(s)	89, 1276
MvaI	CCWGG	3 cut(s)	362, 1011, 1808
MwoI	GCNNNNNNNGC	6 cut(s)	23, 746, 889, 1598, 1702, 2159
NdeI	CATATG	1 cut(s)	2185
NdeII	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
NheI	GCTAGC	1 cut(s)	1430
NlaIV	GGNNCC	3 cut(s)	150, 642, 1007
NmeAIII	GCCGAG	1 cut(s)	1950
NsiI	ATGCAT	1 cut(s)	1296
NspI	RCATGY	2 cut(s)	446, 1136
OliI	CACNNNNGTG	2 cut(s)	1954, 2004
PaeR7I	CTCGAG	1 cut(s)	408
PagI	TCATGA	1 cut(s)	907
PceI	AGGCCT	1 cut(s)	26
PcsI	WCGNNNNNNNCGW	1 cut(s)	1822
PctI	GAATGC	2 cut(s)	89, 1276
PdmI	GAANNNNTTC	2 cut(s)	1027, 1653
PfeI	GAWTC	3 cut(s)	1148, 1415, 1580
PkrI	GCNGC	7 cut(s)	108, 228, 312, 359, 406, 2056, 2152
PleI	GAGTC	4 cut(s)	2, 1181, 1373, 1493
PmeI	GTTTAAAC	1 cut(s)	1444
PpsI	GAGTC	4 cut(s)	2, 1181, 1373, 1493
Ppu21I	YACGTR	1 cut(s)	1408
PshAI	GACNNNNGTC	1 cut(s)	717
PshBI	ATTAAT	1 cut(s)	1289
Psp6I	CCWGG	3 cut(s)	360, 1009, 1806
PspGI	CCWGG	3 cut(s)	360, 1009, 1806
PspN4I	GGNNCC	3 cut(s)	150, 642, 1007
PspPI	GGNCC	2 cut(s)	95, 1810
PspXI	VCTCGAGB	1 cut(s)	408
PstI	CTGCAG	1 cut(s)	847
PsuI	RGATCY	1 cut(s)	1676
RsaI	GTAC	3 cut(s)	859, 1124, 2191
RsaNI	GTAC	3 cut(s)	858, 1123, 2190
RseI	CAYNNNNRTG	3 cut(s)	808, 1954, 2004
SatI	GCNGC	7 cut(s)	107, 227, 311, 358, 405, 2055, 2151
Sau3AI	GATC	8 cut(s)	345, 1495, 1676, 1787, 1924, 2077, 2180, 2236
Sau96I	GGNCC	2 cut(s)	95, 1810
SchI	GAGTC	4 cut(s)	2, 1181, 1373, 1494
ScrFI	CCNGG	3 cut(s)	362, 1011, 1808
SduI	GDGCHC	4 cut(s)	932, 1413, 1715, 2266
SfaNI	GCATC	5 cut(s)	379, 484, 572, 1198, 1872
SfcI	CTRYAG	2 cut(s)	843, 1311
Sfr274I	CTCGAG	1 cut(s)	408
SinI	GGWCC	1 cut(s)	95
SlaI	CTCGAG	1 cut(s)	408
SmiMI	CAYNNNNRTG	3 cut(s)	808, 1954, 2004
SmlI	CTYRAG	3 cut(s)	271, 408, 2064
SmoI	CTYRAG	3 cut(s)	271, 408, 2064
SseBI	AGGCCT	1 cut(s)	26
SsiI	CCGC	3 cut(s)	106, 226, 528
SspI	AATATT	1 cut(s)	1822
SspMI	CTAG	6 cut(s)	111, 1137, 1431, 1470, 1701, 2141
StuI	AGGCCT	1 cut(s)	26
StyD4I	CCNGG	3 cut(s)	360, 1009, 1806
StyI	CCWWGG	2 cut(s)	1700, 1795
TaaI	ACNGT	3 cut(s)	869, 904, 2113
TaiI	ACGT	4 cut(s)	601, 717, 778, 1410
TaqI	TCGA	4 cut(s)	21, 409, 649, 1382
TaqII	GACCGA	2 cut(s)	707, 1196
TatI	WGTACW	2 cut(s)	857, 1122
TauI	GCSGC	2 cut(s)	109, 229
TfiI	GAWTC	3 cut(s)	1148, 1415, 1580
TscAI	CASTG	5 cut(s)	94, 287, 460, 815, 852
TseI	GCWGC	5 cut(s)	310, 357, 404, 2054, 2150
TspGWI	ACGGA	3 cut(s)	141, 2147, 2245
TspRI	CASTG	5 cut(s)	94, 287, 460, 815, 852
Vha464I	CTTAAG	1 cut(s)	271
VneI	GTGCAC	1 cut(s)	1409
VpaK11BI	GGWCC	1 cut(s)	95
VspI	ATTAAT	1 cut(s)	1289
XapI	RAATTY	4 cut(s)	992, 1090, 1757, 2036
XceI	RCATGY	2 cut(s)	446, 1136
XcmI	CCANNNNNNNNNTGG	1 cut(s)	124
XhoI	CTCGAG	1 cut(s)	408
XmaJI	CCTAGG	1 cut(s)	1700
XmnI	GAANNNNTTC	2 cut(s)	1027, 1653
XspI	CTAG	6 cut(s)	111, 1137, 1431, 1470, 1701, 2141
ZraI	GACGTC	1 cut(s)	715
Zsp2I	ATGCAT	1 cut(s)	1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.