Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002916

Physical Location & Seq

Genomic Coordinates Reverse (-)

6171404 .. 6180995

Gene Structure 9592 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1088500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGGCGGATTCGGAGGCGAAGCGTGTGGCGGAAGAAACGTTTCCGGATTTGCTGAAGAACACGCCGAGTAATATCGCGAGATTGGAGGATGAGATTGGACATTGTAAGGGACACAAGAAGTATTTGGCTCAGACTAGAAGCCCGTCCGACGGCGGCGATGTCCGGTGGTACTTTTGCAAAGTCCCATTGGCGGAGAATGAGATGGCTGCTTCAGTCCCAAAGAGTGAGATGGTGGGGAAAGGGGAGTATTTTCGGTTCGGTATGAGGGACTCTCTAGCAATTGAGGCATCGTTTTTGCAGAGGGAGGAAGAGTTGCTTTCTTGGTGGTGGAAGGAGTACGCAGAATGTAGCGAAGGCCCGAAAGAGCGGCCTAGTTCAAGTAAGAAGGTGGCTCCGCGGCAGAGTTCATTTTCTTTAGAGAGGGGTCGGTCGGTTGAGTTAGATCAAGTGGATGAAGAAAGAGTTGGTGTCCCTGTTAAGGGAGGGCTTTATGAGGTAGATTTAGTGAAGCGGCATTCTTTCCCTGTCTATTGGGATGGAGAAAACCTGCGTGTGTTAAGAGGTCACTGGTTTGCTTGTAAAGGGGCCGATTGGCTCCCACTTCGTGAAGATGTTTCTGAACAATTAGAGGTTGCATATCGTAATCAGGTTTGGCACCGGAGAACGTTTCAGCCCTCTGGACTTTTTGCAGCTCGAGTTGAATTGCAAGGCTCTACACCTGGACTGCATGCGCTTTTCACAGGAGAAGATAACACTTGGGAGGCTTGGCTAAATATAGATGCTTCTGGTTTTTCTAGTGTCATTACGTTAGGTGGAAATGGCATGAAATTAAGGCGTGGATATTCCACATCGCACTCTCCGAAACCCACACAGAATGAATTGCGCCAGCAGAAGGAGGAGGAAATGGATGATTATTGCTCGCAGGTTCCTGTTCGACACCTTGTGTTCATGGTTCATGGAATTGGTCAAAGATTGGAGAAATCAAATTTAGTTGATGATGTTGCTAATTTTCACCTTATAACAGCAAGTCTTGCCGAAACACACCTTACTTCACACCAACGTGATTCTCAAAGGGTTCTTTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTTAGTGGTGAAACTGCAGTCGAAAAATGCACTTTAGATGGTGTTAAGGGTTTACGTGTCATGCTGAGTGCAACTGTTCATGATGTGTTATACTACATGAGTCCCATATATTGTCAGGACATCATCAACTCGGTATCCAACCAATTAAATCTGTTATATTTGAAATTTCTTCGGAGGAATCCAGGTTATGATGGAAAGGTTTCCATATATGGTCATTCTTTGGGAAGTGTCCTCTCCTATGATATCCTTTGTCATCAGGAGAATTTGTCCTCCCCATTTCCAATGGATTGGGCGTTCAAAGAACATGCTAGAGATGGAAAATCTTCTCCTGATAATCAATCTACGTACAACACTCCAACTAATTTGGGAGATGCAATTGCCTTTGTAAACAATCAAACTGATGACACAATGGGTTCAATTCATGACGGCAATATGAGTGCGCAACCAACTCTTTTGATACATGAGGATGGAAATGCTGAAGATGCCTTGAATGTTGTTGGTCGCAACACATCAGATTCTAATGAATTTGTTGCAAGGTCTATGGACTCGAAACAACCACATGGTGATAAATATGTTAATGAATCAGTTTGCAAATCAAATGACATGCTTAAATGCGATGGGTTGGATGAAACCAGAACCATAAACTGTGGAGTCCGGGTTGATGGTGCTGATGATGTGGTAGAAAAAGTATGCGAAGAAACGAGCAATAAAGACCAAGTAGTCAAATTGCTGAGGGAAGAGATTGATTCACTCAAGTCCAAAATATCAGAATTGGAAGCCAAATGTGGTGATAGAGATCATAGTCCAGGATTGCATCAAGAAAATGAAGAGGTTCCTGCAACTGTGGCAAAGCAACCCATTTCTGTGGAATTGCCTGTTGCACAAGATGGTTCACCCAAGAATTATACCCCTTATATCACATACACAAAACTTGAATTCAAGGTTGATACATTCTTTGCAGTTGGATCACCCCTTGGGGTTTTTCTTGCCCTTCGTAATATTCGTATTGGGATTGGAAAGGGGACAGAATATTGGGAAGAGGAAAATATAAGTGAGGAGATGCCAGCCTGTCGGCAGATGTTCAATATATTTCATCCCTTTGATCCCGTTGCATATAGGATAGAACCACTTGTGTGTAAAGAATACCTCAGCAAGCGACCTGTTATCATACCCTATCACAAAGGTGGAAAGAGGTTGCATATTGGATTTCAGGAATTTACTGAAGATTTAGCTGCTCGTTCTCAAGCAATGATGGATCGTCTAAACTTCGTAAAGATTAAAGTGCTGACAGTTTGCCAGTCAAGAAATGCAGACAGCCTAGAAGAAGCAGCAGAAACAGCCCCAGAAATGGAAGAGAGATCATATGGCTCTGGTATGATGGAAAGAGTAACAGGAAGTGAAGAAGGGCGGATTGATCATGTGCTTCAAGATAAGACATTTGAACATCCGTATCTTTCTGCAATTGGGGCACATACAAACTATTGGAGGGATTATGATACTGCCCTTTTCATATTGAAACACTTGTACCAAGAAATACACAATGAGAGCTCACTTGAGGAATCTAGTAGGCGAAACTCAAAAACTGAGACTGGTTTCACAGGCTGGTCTGATCAAAGAGAGACGGCAGAGGAGGAGCATCCTTTGACATTCTCTGAAAGTACGGATGAGGATGCTAAATTAGGTGGTTGCGGCAGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005793 GO:0005794 GO:0005798 GO:0005801 GO:0005815 GO:0005829 GO:0005856 GO:0006810 GO:0006888 GO:0008150 GO:0012505 GO:0015630 GO:0016192 GO:0016298 GO:0016787 GO:0016788 GO:0030134 GO:0030135 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0052689 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDHD

Protein Analysis

938

Amino Acids

105.85

Weight (kDa)

5.27

Isoelectric Point (pI)

51.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDHD	PF02862	682 - 824	3.7e-33	DDHD domain
DDHD	PF02862	820 - 880	1.9e-12	DDHD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31480
fragaria_vesca	FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070
malus_domestica	MD08G1108000.v1.1 MD15G1088500.v1.1
prunus_persica	Prupe.1G442600_v2.0.a1
pyrus_communis	pycom08g09000 pycom15g08300
rosa_chinensis	RchiOBHm_Chr5g0047771 RchiOBHm_Chr6g0306901
rosa_laevigata	RLG00000010756
rosa_multiflora	Rmu_sc0019304.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161360
rosa_rugosa	Rorug01G0166300 Rorug01G0480900 Rorug01G0480900 Rorug01G0481000 Rorug01G0481100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354200
rosa_samantha	Rh5AG270400 Rh6AG465800 Rh6BG435000 Rh6CG480400 Rh6DG467300
rosa_wichuraiana	Rw6G040610

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1019
AasI	GACNNNNNNGTC	1 cut(s)	1832
Acc16I	TGCGCA	1 cut(s)	1554
Acc36I	ACCTGC	2 cut(s)	555, 913
AccB1I	GGYRCC	1 cut(s)	654
AccBSI	CCGCTC	1 cut(s)	367
AccII	CGCG	2 cut(s)	77, 397
AccIII	TCCGGA	1 cut(s)	43
AclI	AACGTT	2 cut(s)	38, 665
AclWI	GGATC	3 cut(s)	2086, 2210, 2376
AcsI	RAATTY	6 cut(s)	985, 1277, 1375, 1637, 2048, 2327
AcuI	CTGAAG	4 cut(s)	74, 195, 1611, 2355
AdeI	CACNNNGTG	3 cut(s)	605, 943, 1676
AfaI	GTAC	5 cut(s)	170, 338, 1460, 2639, 2773
AfiI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2461
AflIII	ACRYGT	1 cut(s)	1168
AjnI	CCWGG	3 cut(s)	718, 1294, 1918
AjuI	GAANNNNNNNTTGG	2 cut(s)	447, 479
AleI	CACNNNNGTG	3 cut(s)	1059, 2245, 2295
AloI	GAACNNNNNNTCC	2 cut(s)	1391, 1423
AluBI	AGCT	4 cut(s)	692, 1114, 2345, 2661
AluI	AGCT	4 cut(s)	692, 1114, 2345, 2661
Alw21I	GWGCWC	1 cut(s)	2663
Alw26I	GTCTC	2 cut(s)	2693, 2726
AlwI	GGATC	3 cut(s)	2086, 2210, 2376
Ama87I	CYCGRG	1 cut(s)	693
Aor13HI	TCCGGA	1 cut(s)	43
AoxI	GGCC	3 cut(s)	355, 368, 585
ApeKI	GCWGC	4 cut(s)	206, 689, 2345, 2441
ApoI	RAATTY	6 cut(s)	985, 1277, 1375, 1637, 2048, 2327
Asp700I	GAANNNNTTC	4 cut(s)	39, 1312, 1435, 1944
AspLEI	GCGC	3 cut(s)	733, 885, 1555
AspS9I	GGNCC	2 cut(s)	356, 585
AsuC2I	CCSGG	1 cut(s)	1769
AsuHPI	GGTGA	6 cut(s)	1004, 1133, 1688, 1913, 1998, 2073
AvaI	CYCGRG	1 cut(s)	693
BaeGI	GKGCMC	1 cut(s)	2584
BaeI	ACNNNNGTAYC	4 cut(s)	2546, 2579, 2621, 2654
BanI	GGYRCC	1 cut(s)	654
BanII	GRGCYC	1 cut(s)	2663
Bbv12I	GWGCWC	1 cut(s)	2663
BbvCI	CCTCAGC	2 cut(s)	1844, 2261
BbvI	GCAGC	4 cut(s)	193, 701, 2332, 2453
BceAI	ACGGC	3 cut(s)	166, 1555, 2751
BciT130I	CCWGG	3 cut(s)	720, 1296, 1920
BciVI	GTATCC	1 cut(s)	1258
BclI	TGATCA	2 cut(s)	2527, 2722
BcnI	CCSGG	1 cut(s)	1769
BcoDI	GTCTC	2 cut(s)	2693, 2726
BfaI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2432, 2676
BfmI	CTRYAG	1 cut(s)	1128
BfuAI	ACCTGC	2 cut(s)	555, 913
BfuI	GTATCC	1 cut(s)	1258
BisI	GCNGC	9 cut(s)	154, 207, 368, 398, 512, 690, 2346, 2442, 2803
BlsI	GCNGC	9 cut(s)	155, 208, 369, 399, 513, 691, 2347, 2443, 2804
Bme1390I	CCNGG	4 cut(s)	720, 1296, 1769, 1920
BmeT110I	CYCGRG	1 cut(s)	693
BmgT120I	GGNCC	2 cut(s)	356, 585
BmiI	GGNNCC	6 cut(s)	393, 586, 596, 656, 927, 1947
BmrFI	CCNGG	4 cut(s)	720, 1296, 1769, 1920
BmsI	GCATC	8 cut(s)	296, 769, 1474, 1585, 1936, 2163, 2758, 2773
BplI	GAGNNNNNCTC	2 cut(s)	256, 288
Bpu10I	CCTNAGC	2 cut(s)	1844, 2261
BpuEI	CTTGAG	3 cut(s)	1850, 2340, 2687
BpuMI	CCSGG	1 cut(s)	1769
BsaAI	YACGTR	2 cut(s)	1169, 1458
BsaBI	GATNNNNATC	1 cut(s)	1908
BsaJI	CCNNGG	2 cut(s)	395, 2086
BsaWI	WCCGGW	3 cut(s)	43, 162, 657
BsaXI	ACNNNNNCTCC	8 cut(s)	296, 326, 1090, 1120, 1364, 1394, 1755, 1785
Bsc4I	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2461
Bse1I	ACTGG	4 cut(s)	572, 1093, 2410, 2707
Bse3DI	GCAATG	1 cut(s)	2367
Bse8I	GATNNNNATC	1 cut(s)	1908
BseAI	TCCGGA	1 cut(s)	43
BseBI	CCWGG	3 cut(s)	720, 1296, 1920
BseDI	CCNNGG	2 cut(s)	395, 2086
BseJI	GATNNNNATC	1 cut(s)	1908
BseLI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2461
BseMI	GCAATG	1 cut(s)	2367
BseMII	CTCAG	5 cut(s)	143, 1169, 1835, 2275, 2688
BseNI	ACTGG	4 cut(s)	572, 1093, 2410, 2707
BseRI	GAGGAG	4 cut(s)	911, 2183, 2756, 2759
BseSI	GKGCMC	1 cut(s)	2584
BseXI	GCAGC	4 cut(s)	193, 701, 2332, 2453
Bsh1236I	CGCG	2 cut(s)	77, 397
Bsh1285I	CGRYCG	1 cut(s)	431
BshFI	GGCC	3 cut(s)	357, 370, 587
BshNI	GGYRCC	1 cut(s)	654
BsiEI	CGRYCG	1 cut(s)	431
BsiHKAI	GWGCWC	1 cut(s)	2663
BsiHKCI	CYCGRG	1 cut(s)	693
BsiSI	CCGG	4 cut(s)	44, 163, 658, 1768
BslFI	GGGAC	7 cut(s)	123, 167, 200, 281, 455, 1200, 2149
BslI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2461
BsmAI	GTCTC	2 cut(s)	2693, 2726
BsmBI	CGTCTC	1 cut(s)	2726
BsmFI	GGGAC	7 cut(s)	123, 167, 200, 281, 455, 1200, 2149
BsmI	GAATGC	1 cut(s)	514
BsnI	GGCC	3 cut(s)	357, 370, 587
BsoBI	CYCGRG	1 cut(s)	693
Bsp1286I	GDGCHC	2 cut(s)	2584, 2663
Bsp13I	TCCGGA	1 cut(s)	43
Bsp143I	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
Bsp68I	TCGCGA	1 cut(s)	77
BspANI	GGCC	3 cut(s)	357, 370, 587
BspCNI	CTCAG	5 cut(s)	142, 1170, 1836, 2274, 2689
BspEI	TCCGGA	1 cut(s)	43
BspFNI	CGCG	2 cut(s)	77, 397
BspHI	TCATGA	2 cut(s)	1192, 1534
BspLI	GGNNCC	6 cut(s)	393, 586, 596, 656, 927, 1947
BspMAI	CTGCAG	1 cut(s)	1132
BspMI	ACCTGC	2 cut(s)	555, 913
BspPI	GGATC	3 cut(s)	2086, 2210, 2376
BspT107I	GGYRCC	1 cut(s)	654
BsrBI	CCGCTC	1 cut(s)	367
BsrDI	GCAATG	1 cut(s)	2367
BsrI	ACTGG	4 cut(s)	572, 1093, 2410, 2707
BssECI	CCNNGG	2 cut(s)	395, 2086
BssMI	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
BssT1I	CCWWGG	1 cut(s)	2086
Bst2UI	CCWGG	3 cut(s)	720, 1296, 1920
Bst4CI	ACNGT	4 cut(s)	1189, 1760, 1957, 2404
Bst6I	CTCTTC	5 cut(s)	303, 1845, 1935, 2145, 2460
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstBAI	YACGTR	2 cut(s)	1169, 1458
BstC8I	GCNNGC	5 cut(s)	729, 887, 920, 2178, 2267
BstDEI	CTNAG	6 cut(s)	129, 1115, 1178, 1844, 2261, 2697
BstDSI	CCRYGG	1 cut(s)	395
BstFNI	CGCG	2 cut(s)	77, 397
BstHHI	GCGC	3 cut(s)	733, 885, 1555
BstKTI	GATC	8 cut(s)	445, 1912, 2081, 2218, 2371, 2474, 2530, 2725
BstMAI	GTCTC	2 cut(s)	2693, 2726
BstMBI	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
BstMCI	CGRYCG	1 cut(s)	431
BstMWI	GCNNNNNNNGC	6 cut(s)	284, 1031, 1595, 1958, 2450, 2579
BstNI	CCWGG	3 cut(s)	720, 1296, 1920
BstNSI	RCATGY	3 cut(s)	731, 1421, 1720
BstSCI	CCNGG	4 cut(s)	718, 1294, 1767, 1918
BstSFI	CTRYAG	1 cut(s)	1128
BstSLI	GKGCMC	1 cut(s)	2584
BstSNI	TACGTA	1 cut(s)	1458
BstUI	CGCG	2 cut(s)	77, 397
BstV1I	GCAGC	4 cut(s)	193, 701, 2332, 2453
BstXI	CCANNNNNNTGG	3 cut(s)	1095, 1401, 1978
BsuI	GTATCC	1 cut(s)	1258
BsuRI	GGCC	3 cut(s)	357, 370, 587
BtgI	CCRYGG	1 cut(s)	395
BtgZI	GCGATG	3 cut(s)	171, 834, 1743
BtsIMutI	CAGTG	2 cut(s)	565, 1100
BtuMI	TCGCGA	1 cut(s)	77
BveI	ACCTGC	2 cut(s)	555, 913
Cac8I	GCNNGC	5 cut(s)	729, 887, 920, 2178, 2267
CciI	TCATGA	2 cut(s)	1192, 1534
CfoI	GCGC	3 cut(s)	733, 885, 1555
Cfr13I	GGNCC	2 cut(s)	356, 585
Cfr42I	CCGCGG	1 cut(s)	398
Csp6I	GTAC	5 cut(s)	169, 337, 1459, 2638, 2772
CviQI	GTAC	5 cut(s)	169, 337, 1459, 2638, 2772
DdeI	CTNAG	6 cut(s)	129, 1115, 1178, 1844, 2261, 2697
DpnI	GATC	8 cut(s)	444, 1911, 2080, 2217, 2370, 2473, 2529, 2724
DpnII	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
DraIII	CACNNNGTG	3 cut(s)	605, 943, 1676
DrdI	GACNNNNNNGTC	1 cut(s)	1832
DseDI	GACNNNNNNGTC	1 cut(s)	1832
Eam1104I	CTCTTC	5 cut(s)	303, 1845, 1935, 2145, 2460
EarI	CTCTTC	5 cut(s)	303, 1845, 1935, 2145, 2460
EciI	GGCGGA	4 cut(s)	20, 44, 206, 2536
Ecl136II	GAGCTC	1 cut(s)	2661
Eco105I	TACGTA	1 cut(s)	1458
Eco130I	CCWWGG	1 cut(s)	2086
Eco24I	GRGCYC	1 cut(s)	2663
Eco32I	GATATC	1 cut(s)	1357
Eco53kI	GAGCTC	1 cut(s)	2661
Eco57I	CTGAAG	4 cut(s)	74, 195, 1611, 2355
Eco88I	CYCGRG	1 cut(s)	693
EcoICRI	GAGCTC	1 cut(s)	2661
EcoRI	GAATTC	1 cut(s)	2048
EcoRII	CCWGG	3 cut(s)	718, 1294, 1918
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	1 cut(s)	2086
EcoT38I	GRGCYC	1 cut(s)	2663
ErhI	CCWWGG	1 cut(s)	2086
Esp3I	CGTCTC	1 cut(s)	2726
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FaqI	GGGAC	7 cut(s)	123, 167, 200, 281, 455, 1200, 2149
FauNDI	CATATG	1 cut(s)	2476
FbaI	TGATCA	2 cut(s)	2527, 2722
Fnu4HI	GCNGC	9 cut(s)	154, 207, 368, 398, 512, 690, 2346, 2442, 2803
FriOI	GRGCYC	1 cut(s)	2663
Fsp4HI	GCNGC	9 cut(s)	154, 207, 368, 398, 512, 690, 2346, 2442, 2803
FspBI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2432, 2676
FspI	TGCGCA	1 cut(s)	1554
GlaI	GCGC	3 cut(s)	732, 884, 1554
GluI	GCNGC	9 cut(s)	154, 207, 368, 398, 512, 690, 2346, 2442, 2803
HaeIII	GGCC	3 cut(s)	357, 370, 587
HapII	CCGG	4 cut(s)	44, 163, 658, 1768
HhaI	GCGC	3 cut(s)	733, 885, 1555
Hin6I	GCGC	3 cut(s)	731, 883, 1553
HinP1I	GCGC	3 cut(s)	731, 883, 1553
HindIII	AAGCTT	1 cut(s)	1112
HpaII	CCGG	4 cut(s)	44, 163, 658, 1768
HphI	GGTGA	6 cut(s)	1004, 1133, 1688, 1913, 1998, 2073
Hpy166II	GTNNAC	3 cut(s)	1166, 1501, 2006
Hpy8I	GTNNAC	3 cut(s)	1166, 1501, 2006
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	6 cut(s)	325, 347, 379, 886, 2114, 2510
HpyCH4III	ACNGT	4 cut(s)	1189, 1760, 1957, 2404
HpyCH4IV	ACGT	6 cut(s)	38, 665, 806, 1060, 1168, 1457
HpyF10VI	GCNNNNNNNGC	6 cut(s)	284, 1031, 1595, 1958, 2450, 2579
HpyF3I	CTNAG	6 cut(s)	129, 1115, 1178, 1844, 2261, 2697
HpySE526I	ACGT	6 cut(s)	38, 665, 806, 1060, 1168, 1457
HspAI	GCGC	3 cut(s)	731, 883, 1553
Kpn2I	TCCGGA	1 cut(s)	43
Ksp22I	TGATCA	2 cut(s)	2527, 2722
KspI	CCGCGG	1 cut(s)	398
Kzo9I	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
LmnI	GCTCC	3 cut(s)	397, 600, 2746
Lsp1109I	GCAGC	4 cut(s)	193, 701, 2332, 2453
LweI	GCATC	8 cut(s)	296, 769, 1474, 1585, 1936, 2163, 2758, 2773
MaeI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2432, 2676
MaeII	ACGT	6 cut(s)	38, 665, 806, 1060, 1168, 1457
MaeIII	GTNAC	2 cut(s)	563, 2500
MalI	GATC	8 cut(s)	444, 1911, 2080, 2217, 2370, 2473, 2529, 2724
MbiI	CCGCTC	1 cut(s)	367
MboI	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
MfeI	CAATTG	3 cut(s)	279, 1488, 2574
MhlI	GDGCHC	2 cut(s)	2584, 2663
MlyI	GAGTC	4 cut(s)	263, 1222, 1652, 1773
MmeI	TCCRAC	5 cut(s)	171, 1275, 1493, 1716, 2056
MroI	TCCGGA	1 cut(s)	43
MroXI	GAANNNNTTC	4 cut(s)	39, 1312, 1435, 1944
MseI	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2391
MslI	CAYNNNNRTG	6 cut(s)	1059, 1093, 1578, 1976, 2245, 2295
MspA1I	CMGCKG	1 cut(s)	397
MspI	CCGG	4 cut(s)	44, 163, 658, 1768
MspR9I	CCNGG	4 cut(s)	720, 1296, 1769, 1920
MunI	CAATTG	3 cut(s)	279, 1488, 2574
Mva1269I	GAATGC	1 cut(s)	514
MvaI	CCWGG	3 cut(s)	720, 1296, 1920
MvnI	CGCG	2 cut(s)	77, 397
MwoI	GCNNNNNNNGC	6 cut(s)	284, 1031, 1595, 1958, 2450, 2579
NciI	CCSGG	1 cut(s)	1769
NdeI	CATATG	1 cut(s)	2476
NdeII	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
NlaIV	GGNNCC	6 cut(s)	393, 586, 596, 656, 927, 1947
NmeAIII	GCCGAG	1 cut(s)	90
NmuCI	GTSAC	1 cut(s)	563
NruI	TCGCGA	1 cut(s)	77
NsbI	TGCGCA	1 cut(s)	1554
NspI	RCATGY	3 cut(s)	731, 1421, 1720
OliI	CACNNNNGTG	3 cut(s)	1059, 2245, 2295
PaeI	GCATGC	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	693
PagI	TCATGA	2 cut(s)	1192, 1534
PcsI	WCGNNNNNNNCGW	2 cut(s)	857, 2113
PctI	GAATGC	1 cut(s)	514
PdmI	GAANNNNTTC	4 cut(s)	39, 1312, 1435, 1944
PfeI	GAWTC	7 cut(s)	8, 1064, 1291, 1628, 1694, 1859, 2672
PfoI	TCCNGGA	1 cut(s)	1918
PkrI	GCNGC	9 cut(s)	155, 208, 369, 399, 513, 691, 2347, 2443, 2804
PleI	GAGTC	4 cut(s)	263, 1221, 1652, 1772
PpsI	GAGTC	4 cut(s)	263, 1221, 1652, 1772
Ppu21I	YACGTR	2 cut(s)	1169, 1458
PsiI	TTATAA	1 cut(s)	1019
Psp124BI	GAGCTC	1 cut(s)	2663
Psp1406I	AACGTT	2 cut(s)	38, 665
Psp6I	CCWGG	3 cut(s)	718, 1294, 1918
PspGI	CCWGG	3 cut(s)	718, 1294, 1918
PspN4I	GGNNCC	6 cut(s)	393, 586, 596, 656, 927, 1947
PspPI	GGNCC	2 cut(s)	356, 585
PspXI	VCTCGAGB	1 cut(s)	693
PsrI	GAACNNNNNNTAC	2 cut(s)	239, 271
PstI	CTGCAG	1 cut(s)	1132
RruI	TCGCGA	1 cut(s)	77
RsaI	GTAC	5 cut(s)	170, 338, 1460, 2639, 2773
RsaNI	GTAC	5 cut(s)	169, 337, 1459, 2638, 2772
RseI	CAYNNNNRTG	6 cut(s)	1059, 1093, 1578, 1976, 2245, 2295
SacI	GAGCTC	1 cut(s)	2663
SacII	CCGCGG	1 cut(s)	398
SaqAI	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2391
SatI	GCNGC	9 cut(s)	154, 207, 368, 398, 512, 690, 2346, 2442, 2803
Sau3AI	GATC	8 cut(s)	442, 1909, 2078, 2215, 2368, 2471, 2527, 2722
Sau96I	GGNCC	2 cut(s)	356, 585
SchI	GAGTC	4 cut(s)	263, 1222, 1652, 1773
ScrFI	CCNGG	4 cut(s)	720, 1296, 1769, 1920
SduI	GDGCHC	2 cut(s)	2584, 2663
SfaNI	GCATC	8 cut(s)	296, 769, 1474, 1585, 1936, 2163, 2758, 2773
SfcI	CTRYAG	1 cut(s)	1128
Sfr274I	CTCGAG	1 cut(s)	693
Sfr303I	CCGCGG	1 cut(s)	398
SgrBI	CCGCGG	1 cut(s)	398
SlaI	CTCGAG	1 cut(s)	693
SmiMI	CAYNNNNRTG	6 cut(s)	1059, 1093, 1578, 1976, 2245, 2295
SmlI	CTYRAG	4 cut(s)	693, 1865, 2355, 2666
SmoI	CTYRAG	4 cut(s)	693, 1865, 2355, 2666
SnaBI	TACGTA	1 cut(s)	1458
SphI	GCATGC	1 cut(s)	731
SspI	AATATT	2 cut(s)	2113, 2144
SspMI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2432, 2676
SstI	GAGCTC	1 cut(s)	2663
StyD4I	CCNGG	4 cut(s)	718, 1294, 1767, 1918
StyI	CCWWGG	1 cut(s)	2086
TaaI	ACNGT	4 cut(s)	1189, 1760, 1957, 2404
TaiI	ACGT	6 cut(s)	41, 668, 809, 1063, 1171, 1460
TaqI	TCGA	4 cut(s)	694, 934, 1134, 1661
TaqII	GACCGA	1 cut(s)	417
TauI	GCSGC	5 cut(s)	156, 370, 400, 514, 2805
TfiI	GAWTC	7 cut(s)	8, 1064, 1291, 1628, 1694, 1859, 2672
Tru1I	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2391
Tru9I	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2391
TscAI	CASTG	2 cut(s)	572, 1100
TseFI	GTSAC	1 cut(s)	563
TseI	GCWGC	4 cut(s)	206, 689, 2345, 2441
Tsp45I	GTSAC	1 cut(s)	563
TspGWI	ACGGA	2 cut(s)	2550, 2789
TspRI	CASTG	2 cut(s)	572, 1100
XapI	RAATTY	6 cut(s)	985, 1277, 1375, 1637, 2048, 2327
XceI	RCATGY	3 cut(s)	731, 1421, 1720
XhoI	CTCGAG	1 cut(s)	693
XmnI	GAANNNNTTC	4 cut(s)	39, 1312, 1435, 1944
XspI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2432, 2676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.