Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002916

Physical Location & Seq

Genomic Coordinates Reverse (-)

5199775 .. 5208540

Gene Structure 8766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g08300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGGCGGATTCGGGGGCGAAGCGTGTGGCGGAAGAAACGTTTCCGGATTTGCTGAAGAACACGCCGAGTAATATCGCGAGATTGGAGGATGAGATTGGACAGTGTAAGGGGCACCAGAAGTATTTGGCTCAGACTAGAAGCCCGTCCGACGGCGGCGATGTCCGGTGGTACTTTTGCAAAGTCCCATTGGCGGAGAAGGAGATGGCTGCTTCAGTCCCAAAGAGTGAGATGGTGGGGAAAGGGGAGTATTTTCGGTTCGGTATGAGGGACTCTCTAGCAATTGAGGCATCGTTTTTACAGAGGGAGGAAGAGTTGCTTTCTTGTTGGTGGAAGGAGTACGCAGAATGTAGCGAAGGCCCGAAAGAGCGGCCTAGTTCAAGTAAGAACGTGGCTCAGCGGCAGAGTTCATTTTCTATAGAGAGGGGTCGATCGGTTGAGTTAGATCAAGTGGATGAAGAAAGAGTTGGTGTCCCTGTTAAGGGAGGGCTTTATGAGGTAGATTTAGTGAAGCGGCATTCTTTCCCTGTCTATTGGGATGGAGAAAACCGACGTGTGTTAAGAGGTCACTGGTTTGCTCGTAAAGGGGCTGATTGGCTCCCACTTCGTGAAGATGTTTCTGAACAATTAGAGGTTGCATATCGTAATCAGGTTTGGCACCGGAGAACGTTTCAGCCCTCTGGACTTTTTGCAGCTCGAGTTGAATTGCAAGGCTCTACACCTGGACTGCATGCGCTTTTCACAGGAGAAGATAACACTTGGGAGGCTTGGCTAAATATAGATGCTTCTGGTTTTTCTAGTGTCATTACTTTAGGTGGAAATGGCATGAAATTAAGGCGTGGATATTCCGCATCGCACTCTCCGAAACCCACACAGAATGAATTGCGCCAGCAGAAGGAGGAGGAAATGGATGATTATTGCTCGCAGGTTCCTGTTCGACACCTTGTGTTCATGGTTCATGGAATTGGTCAAAGATTGGAGAAATCAAATTTAGTTGATGATGTTGCTAATTTTCACCTTATAACAGCAAGTCTTGCCGAAACACACCTTACTTCACACCAACGTGATTCTAAAAGGGTTCTTTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTTAGTGGTGAAACTGCAGTCGAAAAATGTACTTTAGATGGTGTTAAGGGTTTACGTGTCATGCTGAGTGCAACTGTTCATGATGTGTTATACTACATGAGTCCCATATATTGTCAGGACATCATCAACTCGGTATCCAACCAATTAAATCGGTTATATTTGAAATTTCTTCGGAGGAATCCAGGTTATGATGGAAAGGTTTCCATATATGGTCATTCTTTGGGAAGTGTCCTCTCCTATGATATCCTTTGTCATCAGGAGAATTTGTCCTCCCCATTTCCAATGGATTGGGCGTTCAAAGAACATGCTAGAGATGGAGAATCTTCTCCTGATAATCAATCTACGTACGACACTCCAACTAATTTGGGAGATGCAATTGCCTTTGTAAACAATCAAACTGATGACACAATGGGTTCAATTCATGACGGCAATATGAGTGCACAACCAAATCTTTTGATACATGAGGATGGAAATGCTGAAGATGCCTCGAATGTTGTTGGTCGCAACACATCAGATTCTAATGAGTTTGTTGCAAGGTCTATGGACTCGAAACAACCACATGGTGATAAATATGTTAATGAATCAGTTTGTAAATCAAATGACATGCTTAAATGCGATGGGTTGGATGAAACCAAAACCATAAACTGTGGAGTCCGGGTTGATGGTGCTGATGATGTGGTAGAAAAAGTATGCGAAGAAACGAGCAATAAAGACCAAGTAGTCAAATTGCTGAGGGAAGAGTTGGATCGATCACCCCTTGGGGTTTTTCTTGCCCTTCGTAATATTCGTATTGGGATTGGAAAGGGGACAGAATATTGGGAAGAGGAAAATATAAGTGAGGAGATGCCAGCTTGTCGGCAGATGTTCAATATATTTCACCCCTTTGATCCCGTTGCATATAGAATAGAACCACTTGTGTGTAAAGAATACCTCAGCAAGCGACCTGTTATCATACCCTATCACAAAGGTGGAAAGAGGTTGCATATTGGATTTCAGGAATTTACTGAAGATTTAGCTGCTTGTTCTCAAGCAATGATGGATCGTCTAAACTTCGTAAAGATTAAAGTGCTGACAGTTTGCCAGTCAAGAAATGCAGAAAGCCTAGAAGAAGGAGCAGAAACAGCCCCAGAAATGGAAGAGAGATCATATGGTTCTCGTATGATGGAAAGAGTAACAGGAAGTGAAGAAGGGCGGATTGATCATGTGCTTCAAGATAAGACATTTGAACATCCGTATCTTTCTGCAATTGGAGCACATACAAACTATTGGAGGGATTATGATACTGCCCTTTTCATATTGAAACACTTGTACCGAGAAATACACGATGAGAGCTTACTTGAGGAATCTAGCAGGCGAAACTCAAAAACGAGAGTGGTTTCACAGGCTGGTCTGATCAAAGAGAGACGGCAGAGGAGGAGCTTCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005793 GO:0005794 GO:0005798 GO:0005801 GO:0005815 GO:0005829 GO:0005856 GO:0006810 GO:0006888 GO:0008150 GO:0012505 GO:0015630 GO:0016192 GO:0016298 GO:0016787 GO:0016788 GO:0030134 GO:0030135 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0052689 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDHD

Protein Analysis

847

Amino Acids

96.11

Weight (kDa)

5.71

Isoelectric Point (pI)

55.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31480
fragaria_vesca	FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070
malus_domestica	MD08G1108000.v1.1 MD15G1088500.v1.1
prunus_persica	Prupe.1G442600_v2.0.a1
pyrus_communis	pycom08g09000 pycom15g08300
rosa_chinensis	RchiOBHm_Chr5g0047771 RchiOBHm_Chr6g0306901
rosa_laevigata	RLG00000010756
rosa_multiflora	Rmu_sc0019304.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161360
rosa_rugosa	Rorug01G0166300 Rorug01G0480900 Rorug01G0480900 Rorug01G0481000 Rorug01G0481100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354200
rosa_samantha	Rh5AG270400 Rh6AG465800 Rh6BG435000 Rh6CG480400 Rh6DG467300
rosa_wichuraiana	Rw6G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1019
AasI	GACNNNNNNGTC	1 cut(s)	1832
Acc36I	ACCTGC	1 cut(s)	913
AccB1I	GGYRCC	2 cut(s)	111, 654
AccBSI	CCGCTC	1 cut(s)	367
AccII	CGCG	1 cut(s)	77
AccIII	TCCGGA	1 cut(s)	43
AciI	CCGC	9 cut(s)	5, 29, 153, 191, 367, 397, 511, 846, 2305
AclI	AACGTT	2 cut(s)	38, 665
AclWI	GGATC	3 cut(s)	1866, 1994, 2160
AcsI	RAATTY	4 cut(s)	985, 1277, 1375, 2111
AcuI	CTGAAG	4 cut(s)	74, 195, 1611, 2139
AdeI	CACNNNGTG	3 cut(s)	605, 943, 1676
AfaI	GTAC	5 cut(s)	170, 338, 1144, 1460, 2423
AfiI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2245
AflIII	ACRYGT	2 cut(s)	550, 1168
AjiI	CACGTC	1 cut(s)	551
AjnI	CCWGG	2 cut(s)	718, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	447, 479
AleI	CACNNNNGTG	3 cut(s)	1059, 2029, 2079
AloI	GAACNNNNNNTCC	2 cut(s)	1391, 1423
AluBI	AGCT	6 cut(s)	692, 1114, 1964, 2129, 2445, 2532
AluI	AGCT	6 cut(s)	692, 1114, 1964, 2129, 2445, 2532
Alw21I	GWGCWC	2 cut(s)	1555, 2368
Alw26I	GTCTC	1 cut(s)	2509
Alw44I	GTGCAC	1 cut(s)	1551
AlwI	GGATC	3 cut(s)	1866, 1994, 2160
Ama87I	CYCGRG	1 cut(s)	693
Aor13HI	TCCGGA	1 cut(s)	43
AoxI	GGCC	2 cut(s)	355, 368
ApaLI	GTGCAC	1 cut(s)	1551
ApeKI	GCWGC	3 cut(s)	206, 689, 2129
ApoI	RAATTY	4 cut(s)	985, 1277, 1375, 2111
Asp700I	GAANNNNTTC	2 cut(s)	39, 1312
AspLEI	GCGC	2 cut(s)	733, 885
AspS9I	GGNCC	1 cut(s)	356
AsuC2I	CCSGG	1 cut(s)	1769
AsuHPI	GGTGA	5 cut(s)	1004, 1133, 1688, 1857, 1982
AvaI	CYCGRG	1 cut(s)	693
BaeGI	GKGCMC	2 cut(s)	114, 1555
BaeI	ACNNNNGTAYC	4 cut(s)	2330, 2363, 2405, 2438
BanI	GGYRCC	2 cut(s)	111, 654
Bbv12I	GWGCWC	2 cut(s)	1555, 2368
BbvCI	CCTCAGC	2 cut(s)	1844, 2045
BbvI	GCAGC	3 cut(s)	193, 701, 2116
BceAI	ACGGC	3 cut(s)	166, 1555, 2534
BciT130I	CCWGG	2 cut(s)	720, 1296
BciVI	GTATCC	1 cut(s)	1258
BclI	TGATCA	2 cut(s)	2311, 2505
BcnI	CCSGG	1 cut(s)	1769
BcoDI	GTCTC	1 cut(s)	2509
BfaI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2216, 2460
BfmI	CTRYAG	2 cut(s)	414, 1128
BfuAI	ACCTGC	1 cut(s)	913
BfuI	GTATCC	1 cut(s)	1258
BisI	GCNGC	7 cut(s)	154, 207, 368, 398, 512, 690, 2130
BlpI	GCTNAGC	1 cut(s)	393
BlsI	GCNGC	7 cut(s)	155, 208, 369, 399, 513, 691, 2131
Bme1390I	CCNGG	3 cut(s)	720, 1296, 1769
BmeT110I	CYCGRG	1 cut(s)	693
BmgBI	CACGTC	1 cut(s)	551
BmgT120I	GGNCC	1 cut(s)	356
BmiI	GGNNCC	4 cut(s)	113, 596, 656, 927
BmrFI	CCNGG	3 cut(s)	720, 1296, 1769
BmsI	GCATC	6 cut(s)	296, 769, 857, 1474, 1585, 1947
BplI	GAGNNNNNCTC	2 cut(s)	256, 288
Bpu10I	CCTNAGC	2 cut(s)	1844, 2045
Bpu1102I	GCTNAGC	1 cut(s)	393
BpuEI	CTTGAG	2 cut(s)	2124, 2471
BpuMI	CCSGG	1 cut(s)	1769
Bsa29I	ATCGAT	1 cut(s)	1861
BsaAI	YACGTR	2 cut(s)	1169, 1458
BsaJI	CCNNGG	1 cut(s)	1870
BsaWI	WCCGGW	3 cut(s)	43, 162, 657
BsaXI	ACNNNNNCTCC	8 cut(s)	296, 326, 1090, 1120, 1364, 1394, 1755, 1785
Bsc4I	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2245
Bse1I	ACTGG	3 cut(s)	572, 1093, 2194
Bse3DI	GCAATG	1 cut(s)	2151
BseAI	TCCGGA	1 cut(s)	43
BseBI	CCWGG	2 cut(s)	720, 1296
BseCI	ATCGAT	1 cut(s)	1861
BseDI	CCNNGG	1 cut(s)	1870
BseGI	GGATG	7 cut(s)	94, 457, 541, 913, 1585, 1744, 2341
BseLI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2245
BseMI	GCAATG	1 cut(s)	2151
BseMII	CTCAG	5 cut(s)	143, 407, 1169, 1835, 2059
BseNI	ACTGG	3 cut(s)	572, 1093, 2194
BseRI	GAGGAG	3 cut(s)	911, 1967, 2539
BseSI	GKGCMC	2 cut(s)	114, 1555
BseXI	GCAGC	3 cut(s)	193, 701, 2116
Bsh1236I	CGCG	1 cut(s)	77
Bsh1285I	CGRYCG	1 cut(s)	431
BshFI	GGCC	2 cut(s)	357, 370
BshNI	GGYRCC	2 cut(s)	111, 654
BshVI	ATCGAT	1 cut(s)	1861
BsiEI	CGRYCG	1 cut(s)	431
BsiHKAI	GWGCWC	2 cut(s)	1555, 2368
BsiHKCI	CYCGRG	1 cut(s)	693
BsiSI	CCGG	4 cut(s)	44, 163, 658, 1768
BsiWI	CGTACG	1 cut(s)	1458
BslFI	GGGAC	6 cut(s)	167, 200, 281, 455, 1200, 1933
BslI	CCNNNNNNNGG	6 cut(s)	149, 190, 478, 479, 892, 2245
BsmAI	GTCTC	1 cut(s)	2509
BsmBI	CGTCTC	1 cut(s)	2509
BsmFI	GGGAC	6 cut(s)	167, 200, 281, 455, 1200, 1933
BsmI	GAATGC	1 cut(s)	514
BsnI	GGCC	2 cut(s)	357, 370
BsoBI	CYCGRG	1 cut(s)	693
Bsp1286I	GDGCHC	3 cut(s)	114, 1555, 2368
Bsp13I	TCCGGA	1 cut(s)	43
Bsp143I	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
Bsp1720I	GCTNAGC	1 cut(s)	393
Bsp68I	TCGCGA	1 cut(s)	77
BspACI	CCGC	9 cut(s)	5, 29, 153, 191, 367, 397, 511, 846, 2305
BspANI	GGCC	2 cut(s)	357, 370
BspCNI	CTCAG	5 cut(s)	142, 406, 1170, 1836, 2058
BspDI	ATCGAT	1 cut(s)	1861
BspEI	TCCGGA	1 cut(s)	43
BspFNI	CGCG	1 cut(s)	77
BspHI	TCATGA	2 cut(s)	1192, 1534
BspLI	GGNNCC	4 cut(s)	113, 596, 656, 927
BspMAI	CTGCAG	1 cut(s)	1132
BspMI	ACCTGC	1 cut(s)	913
BspPI	GGATC	3 cut(s)	1866, 1994, 2160
BspT107I	GGYRCC	2 cut(s)	111, 654
BsrBI	CCGCTC	1 cut(s)	367
BsrDI	GCAATG	1 cut(s)	2151
BsrI	ACTGG	3 cut(s)	572, 1093, 2194
BssECI	CCNNGG	1 cut(s)	1870
BssMI	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
BssT1I	CCWWGG	1 cut(s)	1870
Bst2UI	CCWGG	2 cut(s)	720, 1296
Bst4CI	ACNGT	4 cut(s)	102, 1189, 1760, 2188
Bst6I	CTCTTC	4 cut(s)	303, 1845, 1929, 2244
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstBAI	YACGTR	2 cut(s)	1169, 1458
BstC8I	GCNNGC	6 cut(s)	729, 887, 920, 1962, 2051, 2465
BstDEI	CTNAG	6 cut(s)	129, 393, 1115, 1178, 1844, 2045
BstF5I	GGATG	7 cut(s)	94, 457, 541, 913, 1585, 1744, 2341
BstFNI	CGCG	1 cut(s)	77
BstHHI	GCGC	2 cut(s)	733, 885
BstKTI	GATC	9 cut(s)	431, 445, 1861, 1865, 2002, 2155, 2258, 2314, 2508
BstMAI	GTCTC	1 cut(s)	2509
BstMBI	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
BstMCI	CGRYCG	1 cut(s)	431
BstMWI	GCNNNNNNNGC	5 cut(s)	284, 1031, 1595, 2234, 2363
BstNI	CCWGG	2 cut(s)	720, 1296
BstNSI	RCATGY	3 cut(s)	731, 1421, 1720
BstSCI	CCNGG	3 cut(s)	718, 1294, 1767
BstSFI	CTRYAG	2 cut(s)	414, 1128
BstSLI	GKGCMC	2 cut(s)	114, 1555
BstSNI	TACGTA	1 cut(s)	1458
BstUI	CGCG	1 cut(s)	77
BstV1I	GCAGC	3 cut(s)	193, 701, 2116
BstXI	CCANNNNNNTGG	2 cut(s)	1095, 1401
Bsu15I	ATCGAT	1 cut(s)	1861
BsuI	GTATCC	1 cut(s)	1258
BsuRI	GGCC	2 cut(s)	357, 370
BsuTUI	ATCGAT	1 cut(s)	1861
BtgZI	GCGATG	3 cut(s)	171, 834, 1743
BtrI	CACGTC	1 cut(s)	551
BtsCI	GGATG	7 cut(s)	94, 457, 541, 913, 1585, 1744, 2341
BtsIMutI	CAGTG	3 cut(s)	107, 565, 1100
BtuMI	TCGCGA	1 cut(s)	77
BveI	ACCTGC	1 cut(s)	913
Cac8I	GCNNGC	6 cut(s)	729, 887, 920, 1962, 2051, 2465
CciI	TCATGA	2 cut(s)	1192, 1534
CfoI	GCGC	2 cut(s)	733, 885
Cfr13I	GGNCC	1 cut(s)	356
ClaI	ATCGAT	1 cut(s)	1861
Csp6I	GTAC	5 cut(s)	169, 337, 1143, 1459, 2422
CviQI	GTAC	5 cut(s)	169, 337, 1143, 1459, 2422
DdeI	CTNAG	6 cut(s)	129, 393, 1115, 1178, 1844, 2045
DpnI	GATC	9 cut(s)	430, 444, 1860, 1864, 2001, 2154, 2257, 2313, 2507
DpnII	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
DraIII	CACNNNGTG	3 cut(s)	605, 943, 1676
DrdI	GACNNNNNNGTC	1 cut(s)	1832
DseDI	GACNNNNNNGTC	1 cut(s)	1832
Eam1104I	CTCTTC	4 cut(s)	303, 1845, 1929, 2244
EarI	CTCTTC	4 cut(s)	303, 1845, 1929, 2244
EciI	GGCGGA	4 cut(s)	20, 44, 206, 2320
Eco105I	TACGTA	1 cut(s)	1458
Eco130I	CCWWGG	1 cut(s)	1870
Eco32I	GATATC	1 cut(s)	1357
Eco57I	CTGAAG	4 cut(s)	74, 195, 1611, 2139
Eco88I	CYCGRG	1 cut(s)	693
EcoRII	CCWGG	2 cut(s)	718, 1294
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	1 cut(s)	1870
ErhI	CCWWGG	1 cut(s)	1870
Esp3I	CGTCTC	1 cut(s)	2509
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FaqI	GGGAC	6 cut(s)	167, 200, 281, 455, 1200, 1933
FauNDI	CATATG	1 cut(s)	2260
FbaI	TGATCA	2 cut(s)	2311, 2505
Fnu4HI	GCNGC	7 cut(s)	154, 207, 368, 398, 512, 690, 2130
FokI	GGATG	7 cut(s)	101, 464, 548, 920, 1592, 1751, 2328
Fsp4HI	GCNGC	7 cut(s)	154, 207, 368, 398, 512, 690, 2130
FspBI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2216, 2460
GlaI	GCGC	2 cut(s)	732, 884
GluI	GCNGC	7 cut(s)	154, 207, 368, 398, 512, 690, 2130
HaeIII	GGCC	2 cut(s)	357, 370
HapII	CCGG	4 cut(s)	44, 163, 658, 1768
HhaI	GCGC	2 cut(s)	733, 885
Hin6I	GCGC	2 cut(s)	731, 883
HinP1I	GCGC	2 cut(s)	731, 883
HindIII	AAGCTT	1 cut(s)	1112
HpaII	CCGG	4 cut(s)	44, 163, 658, 1768
HphI	GGTGA	5 cut(s)	1004, 1133, 1688, 1857, 1982
Hpy166II	GTNNAC	3 cut(s)	1166, 1501, 1553
Hpy188I	TCNGA	7 cut(s)	132, 148, 619, 861, 1287, 1627, 2505
Hpy8I	GTNNAC	3 cut(s)	1166, 1501, 1553
Hpy99I	CGWCG	2 cut(s)	152, 552
HpyAV	CCTTC	7 cut(s)	190, 325, 347, 886, 1898, 2216, 2294
HpyCH4III	ACNGT	4 cut(s)	102, 1189, 1760, 2188
HpyCH4IV	ACGT	7 cut(s)	38, 387, 550, 665, 1060, 1168, 1457
HpyF10VI	GCNNNNNNNGC	5 cut(s)	284, 1031, 1595, 2234, 2363
HpyF3I	CTNAG	6 cut(s)	129, 393, 1115, 1178, 1844, 2045
HpySE526I	ACGT	7 cut(s)	38, 387, 550, 665, 1060, 1168, 1457
HspAI	GCGC	2 cut(s)	731, 883
Kpn2I	TCCGGA	1 cut(s)	43
Ksp22I	TGATCA	2 cut(s)	2311, 2505
Kzo9I	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
LmnI	GCTCC	4 cut(s)	600, 2225, 2363, 2529
Lsp1109I	GCAGC	3 cut(s)	193, 701, 2116
LweI	GCATC	6 cut(s)	296, 769, 857, 1474, 1585, 1947
MaeI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2216, 2460
MaeII	ACGT	7 cut(s)	38, 387, 550, 665, 1060, 1168, 1457
MaeIII	GTNAC	2 cut(s)	563, 2284
MalI	GATC	9 cut(s)	430, 444, 1860, 1864, 2001, 2154, 2257, 2313, 2507
MbiI	CCGCTC	1 cut(s)	367
MboI	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
MfeI	CAATTG	3 cut(s)	279, 1488, 2358
MhlI	GDGCHC	3 cut(s)	114, 1555, 2368
MlyI	GAGTC	4 cut(s)	263, 1222, 1652, 1773
MmeI	TCCRAC	5 cut(s)	171, 1275, 1493, 1716, 1836
MroI	TCCGGA	1 cut(s)	43
MroXI	GAANNNNTTC	2 cut(s)	39, 1312
MseI	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2175
MslI	CAYNNNNRTG	5 cut(s)	1059, 1093, 1578, 2029, 2079
MspA1I	CMGCKG	1 cut(s)	397
MspI	CCGG	4 cut(s)	44, 163, 658, 1768
MspR9I	CCNGG	3 cut(s)	720, 1296, 1769
MunI	CAATTG	3 cut(s)	279, 1488, 2358
Mva1269I	GAATGC	1 cut(s)	514
MvaI	CCWGG	2 cut(s)	720, 1296
MvnI	CGCG	1 cut(s)	77
MwoI	GCNNNNNNNGC	5 cut(s)	284, 1031, 1595, 2234, 2363
NciI	CCSGG	1 cut(s)	1769
NdeI	CATATG	1 cut(s)	2260
NdeII	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
NlaIV	GGNNCC	4 cut(s)	113, 596, 656, 927
NmeAIII	GCCGAG	1 cut(s)	90
NmuCI	GTSAC	1 cut(s)	563
NruI	TCGCGA	1 cut(s)	77
NspI	RCATGY	3 cut(s)	731, 1421, 1720
OliI	CACNNNNGTG	3 cut(s)	1059, 2029, 2079
PaeI	GCATGC	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	693
PagI	TCATGA	2 cut(s)	1192, 1534
PcsI	WCGNNNNNNNCGW	2 cut(s)	857, 1897
PctI	GAATGC	1 cut(s)	514
PdmI	GAANNNNTTC	2 cut(s)	39, 1312
PfeI	GAWTC	7 cut(s)	8, 1064, 1291, 1433, 1628, 1694, 2456
Pfl23II	CGTACG	1 cut(s)	1458
PkrI	GCNGC	7 cut(s)	155, 208, 369, 399, 513, 691, 2131
Ple19I	CGATCG	1 cut(s)	431
PleI	GAGTC	4 cut(s)	263, 1221, 1652, 1772
PpsI	GAGTC	4 cut(s)	263, 1221, 1652, 1772
Ppu21I	YACGTR	2 cut(s)	1169, 1458
PsiI	TTATAA	1 cut(s)	1019
Psp1406I	AACGTT	2 cut(s)	38, 665
Psp6I	CCWGG	2 cut(s)	718, 1294
PspGI	CCWGG	2 cut(s)	718, 1294
PspLI	CGTACG	1 cut(s)	1458
PspN4I	GGNNCC	4 cut(s)	113, 596, 656, 927
PspPI	GGNCC	1 cut(s)	356
PspXI	VCTCGAGB	1 cut(s)	693
PsrI	GAACNNNNNNTAC	2 cut(s)	239, 271
PstI	CTGCAG	1 cut(s)	1132
PvuI	CGATCG	1 cut(s)	431
RruI	TCGCGA	1 cut(s)	77
RsaI	GTAC	5 cut(s)	170, 338, 1144, 1460, 2423
RsaNI	GTAC	5 cut(s)	169, 337, 1143, 1459, 2422
RseI	CAYNNNNRTG	5 cut(s)	1059, 1093, 1578, 2029, 2079
SaqAI	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2175
SatI	GCNGC	7 cut(s)	154, 207, 368, 398, 512, 690, 2130
Sau3AI	GATC	9 cut(s)	428, 442, 1858, 1862, 1999, 2152, 2255, 2311, 2505
Sau96I	GGNCC	1 cut(s)	356
SchI	GAGTC	4 cut(s)	263, 1222, 1652, 1773
ScrFI	CCNGG	3 cut(s)	720, 1296, 1769
SduI	GDGCHC	3 cut(s)	114, 1555, 2368
SfaNI	GCATC	6 cut(s)	296, 769, 857, 1474, 1585, 1947
SfcI	CTRYAG	2 cut(s)	414, 1128
Sfr274I	CTCGAG	1 cut(s)	693
SlaI	CTCGAG	1 cut(s)	693
SmiMI	CAYNNNNRTG	5 cut(s)	1059, 1093, 1578, 2029, 2079
SmlI	CTYRAG	3 cut(s)	693, 2139, 2450
SmoI	CTYRAG	3 cut(s)	693, 2139, 2450
SnaBI	TACGTA	1 cut(s)	1458
SphI	GCATGC	1 cut(s)	731
SsiI	CCGC	9 cut(s)	5, 29, 153, 191, 367, 397, 511, 846, 2305
SspI	AATATT	2 cut(s)	1897, 1928
SspMI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2216, 2460
StyD4I	CCNGG	3 cut(s)	718, 1294, 1767
StyI	CCWWGG	1 cut(s)	1870
TaaI	ACNGT	4 cut(s)	102, 1189, 1760, 2188
TaiI	ACGT	7 cut(s)	41, 390, 553, 668, 1063, 1171, 1460
TaqI	TCGA	7 cut(s)	427, 694, 934, 1134, 1601, 1661, 1861
TatI	WGTACW	1 cut(s)	1142
TauI	GCSGC	4 cut(s)	156, 370, 400, 514
TfiI	GAWTC	7 cut(s)	8, 1064, 1291, 1433, 1628, 1694, 2456
Tru1I	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2175
Tru9I	TTAA	8 cut(s)	477, 557, 830, 1158, 1259, 1689, 1722, 2175
TscAI	CASTG	3 cut(s)	107, 572, 1100
TseFI	GTSAC	1 cut(s)	563
TseI	GCWGC	3 cut(s)	206, 689, 2129
Tsp45I	GTSAC	1 cut(s)	563
TspGWI	ACGGA	1 cut(s)	2334
TspRI	CASTG	3 cut(s)	107, 572, 1100
VneI	GTGCAC	1 cut(s)	1551
XapI	RAATTY	4 cut(s)	985, 1277, 1375, 2111
XceI	RCATGY	3 cut(s)	731, 1421, 1720
XhoI	CTCGAG	1 cut(s)	693
XmnI	GAANNNNTTC	2 cut(s)	39, 1312
XspI	CTAG	7 cut(s)	135, 275, 372, 795, 1422, 2216, 2460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.