Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002916

Physical Location & Seq

Genomic Coordinates Reverse (-)

7274057 .. 7280171

Gene Structure 6115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g09000.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGGCATGCCGGATTCGGAGGTGAAGCGTGTGGCGGAAGCGGAAGAAATGTTTCCGGATTTGCTGAAGAACTCGCCGAGTAATATCGCGAGATTGGAATATGAGATTGGGAAGTGTAAGGGCCACCAGAAGTACTTAGCTCAGACTAGAAGCCCGTCCGACGGCAGCGATGTCCGGTGGTACTTTTGCAAAGTTCCATTGGCGGAGAATGATATGGCTGCTTCAGTCCCAAAGAGTGAGATGGTGGGGAAAGGCGAATATTTTCGGTTCGGTATGAGGGACTCTTTGGCAATCGAGGCATCGTTTTTGCAGAGGGAGGAAGATTTGCTTTCTTGTTGGTGGAAGGAGTATGCAGAATGTAGCGAAGGCCCGAAAGAGCAGCCTGGTTCAAGTAAGAAGGTGGCTCAGCGGCAGAGTTCATTTTCTTTAGAAAGAGGCCGGTCAGTTGAGTTAAATCAAGTGGAAGAAGAGAGAGTTGGTGTCCCTGTTAAGGGAGGGCTTTATGAGGTAGATTTAGTGAAGCGACGTTCTTTCCCTGTTTACTGGGATGGAGAAAACCGGCGTGTCTTAAGAGGTCACTGGTTTGCTCGTAAAGGGGCTGATTGGCTCCCATTGCGTGAAGATGTTTCTGAACAATTAGAGGTTGTATATCGTAGTCAGGTTTGGCACCGGAGAACGTTTCAGCCCTCTGGACTTTTTGCAGCTCGAGTTGAATTGCAAGGCTCTACACCTGGACTCCATGCGCTTTTCACAGGAGAAGATAACACTTGGGAGGCTTGGCTAAATATAGATGCTTCTGGTTTTTCCAGTGTCATTTCTTTAGGTGGAAATGGAATGAAGTTAAGGCGTGGATATTCAGCATCTCACTCTCCGAAACCCACCAAGGATGAATTGCGCCAGCAGAAGGAGGAGGAAAGGGATGATTATTGCTCACAGGTTCCTGTTCGACACCTTGTTTTCATGGTTCATGGAATTGGTCAAAGATTGGAGAACTCCAATTTAGTTGATGATGTAGCTAGTTTTCACCGTATAACAGCAAGTCTTGCTGAAACACACCTTACTTCACACCAACGTGACTCCCAAAGGGTTCTTTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTAAGTGGTGAAACTGCAGTCGAAAAATGTACTTTAGATGGTGTTAAGGGTTTGCGTGTCATGCTGAGTGCAACTGTTCATGATGTGTTATACTACATGAGTCCCATCTATTGTCAGGACATCATTGACGCGGTATCCAACCAATTAAATCGGTTATATTTGAAATTTCTTCGGAGAAATCCAGGTTATGATGGAAAGGTTTCCATATTTGGTCATTCTTTGGGAAGTGTCCTCTCCTATGATATCCTTTGTCATCAGGAGAAATTTTCCTCCCTGTTTCCAATGGATTGGATGTTCAAAGAACATGCTAGAGACAGAGAACCTTCTCCTGATATCGACAATCAATCTACATACAACACTCCGAGTAATTTGGGAGATGCAATCACTTTTGTAAATAATCAAACTGATGACATTATGGGTTCAATTGATGATGGAAGTATGAATGCACAACCACCTCTATTGATACATGAGGATGGAAATGCTGAAGATGCCTCGATTGTTGTTGGTTGCAACACATCAGATTCCAATGAGGTCGTTGCATTGTCTGTGGACGCGAACCAACCACATGGTGATACATTTGTCAATGAATCAGTTTGCCAATCAAGCGACATGCTTAAATGGGATGGGTTGGATGAAACCAAAAGCATAAACTGTGGAGTCCCGGTTGTTGGTCCTGAGGATGTGGTTGAAGAAGTATGCAAAGAAACGAACAATAAAGACAAAGTAGTCAAATTGCTGAGGGAAGCGATTGATGCACTCAAATCCAAAATAGCAGAATTGGAAGCCAAATGTGGTGATAGAGGTCATAGTCCAGGGTTGCATCAAGAAAATGAAGAGGTTCTTGCAACTGTGGCAAAGCAACCCATTTCTGAGGAATCGCCTGTTGTGCCAGATGGCTCACCCAAGAATCATACCCCTTCTATCACATATACAAAACTTGAATTCAAGGTTGATACATTCTTTGCAGTTGGATCACCCCTTGGGGTTTTTCTTGCCCTTCGTAATATTCGTATTGGGATTGGTAATGGTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005793 GO:0005794 GO:0005798 GO:0005801 GO:0005815 GO:0005829 GO:0005856 GO:0006810 GO:0006888 GO:0008150 GO:0012505 GO:0015630 GO:0016192 GO:0016298 GO:0016787 GO:0016788 GO:0030134 GO:0030135 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0052689 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDHD

Protein Analysis

720

Amino Acids

80.46

Weight (kDa)

5.4

Isoelectric Point (pI)

48.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31480
fragaria_vesca	FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070 FvH4_2g35070
malus_domestica	MD08G1108000.v1.1 MD15G1088500.v1.1
prunus_persica	Prupe.1G442600_v2.0.a1
pyrus_communis	pycom08g09000 pycom15g08300
rosa_chinensis	RchiOBHm_Chr5g0047771 RchiOBHm_Chr6g0306901
rosa_laevigata	RLG00000010756
rosa_multiflora	Rmu_sc0019304.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161360
rosa_rugosa	Rorug01G0166300 Rorug01G0480900 Rorug01G0480900 Rorug01G0481000 Rorug01G0481100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354100 Rorug06G0354200
rosa_samantha	Rh5AG270400 Rh6AG465800 Rh6BG435000 Rh6CG480400 Rh6DG467300
rosa_wichuraiana	Rw6G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1850
AccB1I	GGYRCC	1 cut(s)	666
AccII	CGCG	3 cut(s)	89, 1256, 1679
AccIII	TCCGGA	1 cut(s)	55
AciI	CCGC	5 cut(s)	35, 41, 203, 409, 1256
AclI	AACGTT	1 cut(s)	677
AclWI	GGATC	1 cut(s)	2104
AcsI	RAATTY	3 cut(s)	1289, 1388, 2066
AcuI	CTGAAG	3 cut(s)	86, 207, 1629
AdeI	CACNNNGTG	1 cut(s)	1694
AfaI	GTAC	3 cut(s)	134, 182, 1156
AfiI	CCNNNNNNNGG	5 cut(s)	161, 490, 491, 904, 1793
AflII	CTTAAG	1 cut(s)	568
AgsI	TTSAA	9 cut(s)	390, 713, 1123, 1288, 1423, 1548, 1814, 2066, 2071
AjnI	CCWGG	4 cut(s)	382, 730, 1306, 1936
AjuI	GAANNNNNNNTTGG	4 cut(s)	90, 122, 459, 491
AleI	CACNNNNGTG	1 cut(s)	1071
AloI	GAACNNNNNNTCC	2 cut(s)	1403, 1435
AluBI	AGCT	4 cut(s)	140, 704, 1016, 1126
AluI	AGCT	4 cut(s)	140, 704, 1016, 1126
Alw26I	GTCTC	1 cut(s)	1431
AlwI	GGATC	1 cut(s)	2104
Ama87I	CYCGRG	1 cut(s)	705
Aor13HI	TCCGGA	1 cut(s)	55
AoxI	GGCC	3 cut(s)	121, 367, 436
ApeKI	GCWGC	4 cut(s)	165, 218, 379, 701
ApoI	RAATTY	3 cut(s)	1289, 1388, 2066
Asp700I	GAANNNNTTC	4 cut(s)	51, 261, 1324, 1962
AspLEI	GCGC	2 cut(s)	745, 897
AspS9I	GGNCC	3 cut(s)	121, 368, 1796
AsuC2I	CCSGG	1 cut(s)	1787
AsuHPI	GGTGA	7 cut(s)	34, 1016, 1145, 1706, 1931, 2016, 2091
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	1 cut(s)	1796
AxyI	CCTNAGG	1 cut(s)	1800
BaeI	ACNNNNGTAYC	2 cut(s)	1689, 1722
BanI	GGYRCC	1 cut(s)	666
BbvCI	CCTCAGC	1 cut(s)	1862
BbvI	GCAGC	4 cut(s)	177, 205, 391, 713
BccI	CCATC	9 cut(s)	235, 542, 1157, 1238, 1310, 1550, 1592, 1742, 2012
BceAI	ACGGC	1 cut(s)	178
BciT130I	CCWGG	4 cut(s)	384, 732, 1308, 1938
BciVI	GTATCC	1 cut(s)	1270
BcnI	CCSGG	1 cut(s)	1787
BcoDI	GTCTC	1 cut(s)	1431
BfaI	CTAG	3 cut(s)	147, 1017, 1434
BfmI	CTRYAG	1 cut(s)	1140
BfrI	CTTAAG	1 cut(s)	568
BfuI	GTATCC	1 cut(s)	1270
BisI	GCNGC	5 cut(s)	166, 219, 380, 410, 702
BlpI	GCTNAGC	1 cut(s)	405
BlsI	GCNGC	5 cut(s)	167, 220, 381, 411, 703
BmcAI	AGTACT	1 cut(s)	134
Bme1390I	CCNGG	5 cut(s)	384, 732, 1308, 1787, 1938
Bme18I	GGWCC	1 cut(s)	1796
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	3 cut(s)	121, 368, 1796
BmiI	GGNNCC	3 cut(s)	608, 668, 939
BmrFI	CCNGG	5 cut(s)	384, 732, 1308, 1787, 1938
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	7 cut(s)	308, 781, 869, 1492, 1603, 1867, 1954
BmuI	ACTGGG	1 cut(s)	553
Bpu10I	CCTNAGC	1 cut(s)	1862
Bpu1102I	GCTNAGC	1 cut(s)	405
BpuMI	CCSGG	1 cut(s)	1787
BsaJI	CCNNGG	3 cut(s)	882, 1937, 2104
BsaWI	WCCGGW	3 cut(s)	55, 174, 669
BsaXI	ACNNNNNCTCC	6 cut(s)	720, 750, 1102, 1132, 1773, 1803
Bsc4I	CCNNNNNNNGG	5 cut(s)	161, 490, 491, 904, 1793
Bse118I	RCCGGY	2 cut(s)	438, 558
Bse1I	ACTGG	4 cut(s)	548, 584, 807, 1105
Bse21I	CCTNAGG	1 cut(s)	1800
Bse3DI	GCAATG	1 cut(s)	611
BseAI	TCCGGA	1 cut(s)	55
BseBI	CCWGG	4 cut(s)	384, 732, 1308, 1938
BseDI	CCNNGG	3 cut(s)	882, 1937, 2104
BseGI	GGATG	8 cut(s)	553, 892, 925, 1422, 1603, 1753, 1762, 1810
BseLI	CCNNNNNNNGG	5 cut(s)	161, 490, 491, 904, 1793
BseMI	GCAATG	1 cut(s)	611
BseMII	CTCAG	6 cut(s)	155, 419, 1181, 1791, 1853, 1986
BseNI	ACTGG	4 cut(s)	548, 584, 807, 1105
BseRI	GAGGAG	1 cut(s)	923
BseXI	GCAGC	4 cut(s)	177, 205, 391, 713
Bsh1236I	CGCG	3 cut(s)	89, 1256, 1679
BshFI	GGCC	3 cut(s)	123, 369, 438
BshNI	GGYRCC	1 cut(s)	666
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	7 cut(s)	11, 56, 175, 439, 559, 670, 1787
BslFI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1769
BslI	CCNNNNNNNGG	5 cut(s)	161, 490, 491, 904, 1793
BsmAI	GTCTC	1 cut(s)	1431
BsmFI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1769
BsmI	GAATGC	1 cut(s)	1573
BsnI	GGCC	3 cut(s)	123, 369, 438
BsoBI	CYCGRG	1 cut(s)	705
Bsp13I	TCCGGA	1 cut(s)	55
Bsp143I	GATC	1 cut(s)	2096
Bsp1720I	GCTNAGC	1 cut(s)	405
Bsp68I	TCGCGA	1 cut(s)	89
BspACI	CCGC	5 cut(s)	35, 41, 203, 409, 1256
BspANI	GGCC	3 cut(s)	123, 369, 438
BspCNI	CTCAG	6 cut(s)	154, 418, 1182, 1792, 1854, 1987
BspEI	TCCGGA	1 cut(s)	55
BspFNI	CGCG	3 cut(s)	89, 1256, 1679
BspHI	TCATGA	1 cut(s)	1204
BspLI	GGNNCC	3 cut(s)	608, 668, 939
BspMAI	CTGCAG	1 cut(s)	1144
BspPI	GGATC	1 cut(s)	2104
BspT107I	GGYRCC	1 cut(s)	666
BspTI	CTTAAG	1 cut(s)	568
BsrDI	GCAATG	1 cut(s)	611
BsrFI	RCCGGY	2 cut(s)	438, 558
BsrI	ACTGG	4 cut(s)	548, 584, 807, 1105
BssAI	RCCGGY	2 cut(s)	438, 558
BssECI	CCNNGG	3 cut(s)	882, 1937, 2104
BssMI	GATC	1 cut(s)	2096
BssT1I	CCWWGG	2 cut(s)	882, 2104
Bst2UI	CCWGG	4 cut(s)	384, 732, 1308, 1938
Bst4CI	ACNGT	4 cut(s)	1028, 1201, 1778, 1975
Bst6I	CTCTTC	2 cut(s)	462, 1953
BstAFI	CTTAAG	1 cut(s)	568
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstC8I	GCNNGC	2 cut(s)	8, 899
BstDEI	CTNAG	8 cut(s)	136, 141, 405, 1127, 1190, 1800, 1862, 1995
BstF5I	GGATG	8 cut(s)	553, 892, 925, 1422, 1603, 1753, 1762, 1810
BstFNI	CGCG	3 cut(s)	89, 1256, 1679
BstHHI	GCGC	2 cut(s)	745, 897
BstKTI	GATC	1 cut(s)	2099
BstMAI	GTCTC	1 cut(s)	1431
BstMBI	GATC	1 cut(s)	2096
BstMWI	GCNNNNNNNGC	9 cut(s)	296, 613, 1043, 1186, 1613, 1728, 1877, 1976, 2011
BstNI	CCWGG	4 cut(s)	384, 732, 1308, 1938
BstNSI	RCATGY	3 cut(s)	10, 1433, 1738
BstSCI	CCNGG	5 cut(s)	382, 730, 1306, 1785, 1936
BstSFI	CTRYAG	1 cut(s)	1140
BstUI	CGCG	3 cut(s)	89, 1256, 1679
BstV1I	GCAGC	4 cut(s)	177, 205, 391, 713
BstXI	CCANNNNNNTGG	3 cut(s)	1107, 1413, 1691
Bsu36I	CCTNAGG	1 cut(s)	1800
BsuI	GTATCC	1 cut(s)	1270
BsuRI	GGCC	3 cut(s)	123, 369, 438
BtgZI	GCGATG	1 cut(s)	183
BtsCI	GGATG	8 cut(s)	553, 892, 925, 1422, 1603, 1753, 1762, 1810
BtsIMutI	CAGTG	3 cut(s)	577, 814, 1112
BtuMI	TCGCGA	1 cut(s)	89
Cac8I	GCNNGC	2 cut(s)	8, 899
CciI	TCATGA	1 cut(s)	1204
CfoI	GCGC	2 cut(s)	745, 897
Cfr10I	RCCGGY	2 cut(s)	438, 558
Cfr13I	GGNCC	3 cut(s)	121, 368, 1796
CseI	GACGC	2 cut(s)	1262, 1685
Csp6I	GTAC	3 cut(s)	133, 181, 1155
CspCI	CAANNNNNGTGG	2 cut(s)	1566, 1601
CviQI	GTAC	3 cut(s)	133, 181, 1155
DdeI	CTNAG	8 cut(s)	136, 141, 405, 1127, 1190, 1800, 1862, 1995
DpnI	GATC	1 cut(s)	2098
DpnII	GATC	1 cut(s)	2096
DraIII	CACNNNGTG	1 cut(s)	1694
DrdI	GACNNNNNNGTC	1 cut(s)	1850
DseDI	GACNNNNNNGTC	1 cut(s)	1850
Eam1104I	CTCTTC	2 cut(s)	462, 1953
EarI	CTCTTC	2 cut(s)	462, 1953
EciI	GGCGGA	2 cut(s)	50, 218
Eco130I	CCWWGG	2 cut(s)	882, 2104
Eco32I	GATATC	2 cut(s)	1369, 1459
Eco47I	GGWCC	1 cut(s)	1796
Eco57I	CTGAAG	3 cut(s)	86, 207, 1629
Eco81I	CCTNAGG	1 cut(s)	1800
Eco88I	CYCGRG	1 cut(s)	705
EcoRI	GAATTC	1 cut(s)	2066
EcoRII	CCWGG	4 cut(s)	382, 730, 1306, 1936
EcoRV	GATATC	2 cut(s)	1369, 1459
EcoT14I	CCWWGG	2 cut(s)	882, 2104
ErhI	CCWWGG	2 cut(s)	882, 2104
FalI	AAGNNNNNCTT	4 cut(s)	312, 344, 1950, 1982
FaqI	GGGAC	5 cut(s)	212, 293, 467, 1212, 1769
Fnu4HI	GCNGC	5 cut(s)	166, 219, 380, 410, 702
FokI	GGATG	8 cut(s)	560, 899, 932, 1429, 1610, 1760, 1769, 1817
Fsp4HI	GCNGC	5 cut(s)	166, 219, 380, 410, 702
FspBI	CTAG	3 cut(s)	147, 1017, 1434
GlaI	GCGC	2 cut(s)	744, 896
GluI	GCNGC	5 cut(s)	166, 219, 380, 410, 702
HaeIII	GGCC	3 cut(s)	123, 369, 438
HapII	CCGG	7 cut(s)	11, 56, 175, 439, 559, 670, 1787
HgaI	GACGC	2 cut(s)	1262, 1685
HhaI	GCGC	2 cut(s)	745, 897
Hin6I	GCGC	2 cut(s)	743, 895
HinP1I	GCGC	2 cut(s)	743, 895
HpaII	CCGG	7 cut(s)	11, 56, 175, 439, 559, 670, 1787
HphI	GGTGA	7 cut(s)	34, 1016, 1145, 1706, 1931, 2016, 2091
Hpy166II	GTNNAC	2 cut(s)	541, 1675
Hpy188I	TCNGA	9 cut(s)	19, 144, 160, 631, 873, 1299, 1488, 1645, 1996
Hpy188III	TCNNGA	9 cut(s)	56, 88, 690, 1205, 1241, 1382, 1454, 1799, 1949
Hpy8I	GTNNAC	2 cut(s)	541, 1675
Hpy99I	CGWCG	2 cut(s)	164, 528
HpyAV	CCTTC	7 cut(s)	337, 359, 391, 898, 1458, 2052, 2132
HpyCH4III	ACNGT	4 cut(s)	1028, 1201, 1778, 1975
HpyCH4IV	ACGT	3 cut(s)	526, 677, 1072
HpyF10VI	GCNNNNNNNGC	9 cut(s)	296, 613, 1043, 1186, 1613, 1728, 1877, 1976, 2011
HpyF3I	CTNAG	8 cut(s)	136, 141, 405, 1127, 1190, 1800, 1862, 1995
HpySE526I	ACGT	3 cut(s)	526, 677, 1072
HspAI	GCGC	2 cut(s)	743, 895
Kpn2I	TCCGGA	1 cut(s)	55
Kzo9I	GATC	1 cut(s)	2096
LmnI	GCTCC	1 cut(s)	612
Lsp1109I	GCAGC	4 cut(s)	177, 205, 391, 713
LweI	GCATC	7 cut(s)	308, 781, 869, 1492, 1603, 1867, 1954
MaeI	CTAG	3 cut(s)	147, 1017, 1434
MaeII	ACGT	3 cut(s)	526, 677, 1072
MaeIII	GTNAC	2 cut(s)	575, 1073
MalI	GATC	1 cut(s)	2098
MboI	GATC	1 cut(s)	2096
MfeI	CAATTG	1 cut(s)	1548
MlyI	GAGTC	5 cut(s)	275, 729, 1070, 1234, 1791
MmeI	TCCRAC	4 cut(s)	183, 1287, 1734, 2074
MroI	TCCGGA	1 cut(s)	55
MroXI	GAANNNNTTC	4 cut(s)	51, 261, 1324, 1962
MseI	TTAA	7 cut(s)	452, 489, 569, 842, 1170, 1271, 1740
MslI	CAYNNNNRTG	3 cut(s)	1071, 1105, 1596
MspA1I	CMGCKG	1 cut(s)	409
MspCI	CTTAAG	1 cut(s)	568
MspI	CCGG	7 cut(s)	11, 56, 175, 439, 559, 670, 1787
MspR9I	CCNGG	5 cut(s)	384, 732, 1308, 1787, 1938
MunI	CAATTG	1 cut(s)	1548
Mva1269I	GAATGC	1 cut(s)	1573
MvaI	CCWGG	4 cut(s)	384, 732, 1308, 1938
MvnI	CGCG	3 cut(s)	89, 1256, 1679
MwoI	GCNNNNNNNGC	9 cut(s)	296, 613, 1043, 1186, 1613, 1728, 1877, 1976, 2011
NciI	CCSGG	1 cut(s)	1787
NdeII	GATC	1 cut(s)	2096
NlaIV	GGNNCC	3 cut(s)	608, 668, 939
NmeAIII	GCCGAG	1 cut(s)	102
NmuCI	GTSAC	2 cut(s)	575, 1073
NruI	TCGCGA	1 cut(s)	89
NspI	RCATGY	3 cut(s)	10, 1433, 1738
OliI	CACNNNNGTG	1 cut(s)	1071
PaeI	GCATGC	1 cut(s)	10
PaeR7I	CTCGAG	1 cut(s)	705
PagI	TCATGA	1 cut(s)	1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	2131
PctI	GAATGC	1 cut(s)	1573
PdmI	GAANNNNTTC	4 cut(s)	51, 261, 1324, 1962
PfeI	GAWTC	5 cut(s)	14, 1646, 1712, 2000, 2032
PkrI	GCNGC	5 cut(s)	167, 220, 381, 411, 703
PleI	GAGTC	5 cut(s)	275, 729, 1070, 1233, 1790
PpsI	GAGTC	5 cut(s)	275, 729, 1070, 1233, 1790
Psp1406I	AACGTT	1 cut(s)	677
Psp6I	CCWGG	4 cut(s)	382, 730, 1306, 1936
PspGI	CCWGG	4 cut(s)	382, 730, 1306, 1936
PspN4I	GGNNCC	3 cut(s)	608, 668, 939
PspPI	GGNCC	3 cut(s)	121, 368, 1796
PspXI	VCTCGAGB	1 cut(s)	705
PstI	CTGCAG	1 cut(s)	1144
RruI	TCGCGA	1 cut(s)	89
RsaI	GTAC	3 cut(s)	134, 182, 1156
RsaNI	GTAC	3 cut(s)	133, 181, 1155
RseI	CAYNNNNRTG	3 cut(s)	1071, 1105, 1596
SaqAI	TTAA	7 cut(s)	452, 489, 569, 842, 1170, 1271, 1740
SatI	GCNGC	5 cut(s)	166, 219, 380, 410, 702
Sau3AI	GATC	1 cut(s)	2096
Sau96I	GGNCC	3 cut(s)	121, 368, 1796
ScaI	AGTACT	1 cut(s)	134
SchI	GAGTC	5 cut(s)	275, 729, 1070, 1234, 1791
ScrFI	CCNGG	5 cut(s)	384, 732, 1308, 1787, 1938
SfaNI	GCATC	7 cut(s)	308, 781, 869, 1492, 1603, 1867, 1954
SfcI	CTRYAG	1 cut(s)	1140
Sfr274I	CTCGAG	1 cut(s)	705
SinI	GGWCC	1 cut(s)	1796
SlaI	CTCGAG	1 cut(s)	705
SmiMI	CAYNNNNRTG	3 cut(s)	1071, 1105, 1596
SmlI	CTYRAG	2 cut(s)	568, 705
SmoI	CTYRAG	2 cut(s)	568, 705
SphI	GCATGC	1 cut(s)	10
SsiI	CCGC	5 cut(s)	35, 41, 203, 409, 1256
SspI	AATATT	2 cut(s)	260, 2131
SspMI	CTAG	3 cut(s)	147, 1017, 1434
StyD4I	CCNGG	5 cut(s)	382, 730, 1306, 1785, 1936
StyI	CCWWGG	2 cut(s)	882, 2104
TaaI	ACNGT	4 cut(s)	1028, 1201, 1778, 1975
TaiI	ACGT	3 cut(s)	529, 680, 1075
TaqI	TCGA	7 cut(s)	294, 706, 946, 1146, 1461, 1619, 2155
TatI	WGTACW	2 cut(s)	132, 1154
TauI	GCSGC	1 cut(s)	412
TfiI	GAWTC	5 cut(s)	14, 1646, 1712, 2000, 2032
Tru1I	TTAA	7 cut(s)	452, 489, 569, 842, 1170, 1271, 1740
Tru9I	TTAA	7 cut(s)	452, 489, 569, 842, 1170, 1271, 1740
TscAI	CASTG	3 cut(s)	584, 814, 1112
TseFI	GTSAC	2 cut(s)	575, 1073
TseI	GCWGC	4 cut(s)	165, 218, 379, 701
Tsp45I	GTSAC	2 cut(s)	575, 1073
TspRI	CASTG	3 cut(s)	584, 814, 1112
Vha464I	CTTAAG	1 cut(s)	568
VpaK11BI	GGWCC	1 cut(s)	1796
XapI	RAATTY	3 cut(s)	1289, 1388, 2066
XceI	RCATGY	3 cut(s)	10, 1433, 1738
XhoI	CTCGAG	1 cut(s)	705
XmnI	GAANNNNTTC	4 cut(s)	51, 261, 1324, 1962
XspI	CTAG	3 cut(s)	147, 1017, 1434
ZrmI	AGTACT	1 cut(s)	134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.