MD09G1024000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
1429567 .. 1431543
1977 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1024000.v1.1.491

Sequence Viewer

Length: 1116 bp
ATGGGATCTGGTAATGGGGTTTACTCAGTTGCGGATTTCGATTTGGACGCCAAGTGGCTGATCGATCCAAAGCATCTTTTTGTTGGTCCGAGGATTGGGGAAGGCGCGCTTGCCAAAGTGTACGAAGGAAAAACTAATCAAAGATCAAAACTTGCTTTGGTGTTGGGCATTTATGGTGTTTACGATGCCGAATATGTGTTTTTCTTGTCGAGTTACAACGATGATGTTCTGTTCTGTTGTATTGCCAAGAGAGAAGCGCGGTTTGCGAGGGAAGTGGCAATGATGTCGAAAGTGCAGCACAAAAACTTAGTGAAGTTCATTGGTGCCTGCAAAGAACCTGTCATGGTCATAGTGACTGAGCTTCTTCTAGGCGGAACTTTGCGCAAATACTTGTTCAGTATGCGGCCAAGGTGCTTGGACACGTGCATGGCAGTTGGGTTTGCGCTTGATATTGCTCGTGCTATGGAGTGCTTACACTCCCACGGTATCATTCACTGTGACCTGAAACCTGAGAATCTGATCTTGACTGCCGACCAAAAAACAGTCAAACTTGCAGACTTTGGCTTAGCAAGAGAAGAGTCATTGACAGAGATGATGACCGCCGAAACTGGGACATACCGGTGGATGGCTCCTGAGCTTTACAGCACAGTTACATTACGACATGGAGAAAAGAAGCATTACAATCATAAGGTGGACGCTTACAGCTTTGCAATTGTATTGTGGGAACTCATCCATAACAAGCTGCCTTTCGAAGGCATGTCGAATTTACAAGCTGCGTATGCAGCTGCTTTTAAGAATGTGAGGCCGAGTGCTGATAGCCTCCCCAAGGATTTGGCGTTGATTGTAACTTCATGTTGGAAAGAGGATCCCAATGACCGGCCCAACTTCACCCAAATTATACAGATGCTGCTGCGTTACCTCTCTACTATTTCGGCACCAGCACCCGCTATCCCTCAACGGATATTCAAATCTGAGAACGCTGTACTCCCACCAGAGTCGCCTGGTACTAGTTCTTTGATGGTTACTCACAACGACTCGGGTGAAACCCCTAAATCCAACACGCACATGGAAGACAAACCTAAAGGTTTTTTCTCCTGCTTTAGCCAGTGTTATTGA

Protein Analysis

372

Amino Acids

41.53

Weight (kDa)

7.14

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 84 - 303 2.6e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 84 - 302 9.4e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 383
AccB1I GGYRCC 2 cut(s) 323, 934
AccII CGCG 2 cut(s) 107, 259
AciI CCGC 6 cut(s) 32, 259, 372, 403, 600, 945
AclWI GGATC 4 cut(s) 13, 59, 860, 873
AcoI YGGCCR 1 cut(s) 404
AcsI RAATTY 1 cut(s) 763
AcvI CACGTG 1 cut(s) 423
AcyI GRCGYC 1 cut(s) 48
AfaI GTAC 3 cut(s) 122, 984, 1006
AfiI CCNNNNNNNGG 6 cut(s) 95, 609, 625, 752, 826, 876
AflIII ACRYGT 1 cut(s) 420
AgeI ACCGGT 1 cut(s) 618
AgsI TTSAA 1 cut(s) 967
AhlI ACTAGT 1 cut(s) 1007
AjnI CCWGG 1 cut(s) 1000
AluBI AGCT 6 cut(s) 361, 637, 705, 742, 773, 785
AluI AGCT 6 cut(s) 361, 637, 705, 742, 773, 785
AlwI GGATC 4 cut(s) 13, 59, 860, 873
AlwNI CAGNNNCTG 1 cut(s) 907
Ama87I CYCGRG 1 cut(s) 1036
AoxI GGCC 3 cut(s) 404, 803, 878
ApeKI GCWGC 7 cut(s) 295, 742, 773, 782, 785, 907, 910
ApoI RAATTY 1 cut(s) 763
ArsI GACNNNNNNTTYG 2 cut(s) 324, 356
AsiGI ACCGGT 1 cut(s) 618
AspLEI GCGC 5 cut(s) 107, 109, 259, 384, 445
AspS9I GGNCC 2 cut(s) 86, 879
AsuHPI GGTGA 2 cut(s) 880, 1052
AsuII TTCGAA 1 cut(s) 750
AvaI CYCGRG 1 cut(s) 1036
AvaII GGWCC 1 cut(s) 86
BamHI GGATCC 1 cut(s) 865
BanI GGYRCC 2 cut(s) 323, 934
BauI CACGAG 1 cut(s) 456
BbrPI CACGTG 1 cut(s) 423
BbsI GAAGAC 1 cut(s) 1077
BbvI GCAGC 7 cut(s) 307, 729, 760, 772, 794, 894, 897
BccI CCATC 2 cut(s) 619, 1012
BcgI CGANNNNNNTGC 2 cut(s) 267, 301
BciT130I CCWGG 1 cut(s) 1002
BcuI ACTAGT 1 cut(s) 1007
BfaI CTAG 2 cut(s) 368, 1008
BisI GCNGC 8 cut(s) 296, 404, 743, 774, 783, 786, 908, 911
BlpI GCTNAGC 1 cut(s) 565
BlsI GCNGC 8 cut(s) 297, 405, 744, 775, 784, 787, 909, 912
Bme1390I CCNGG 1 cut(s) 1002
Bme18I GGWCC 1 cut(s) 86
BmeT110I CYCGRG 1 cut(s) 1036
BmgT120I GGNCC 2 cut(s) 86, 879
BmiI GGNNCC 4 cut(s) 325, 630, 867, 936
BmrFI CCNGG 1 cut(s) 1002
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 3 cut(s) 82, 175, 894
BmuI ACTGGG 1 cut(s) 618
BpiI GAAGAC 1 cut(s) 1077
Bpu10I CCTNAGC 1 cut(s) 633
Bpu1102I GCTNAGC 1 cut(s) 565
Bpu14I TTCGAA 1 cut(s) 750
Bsa29I ATCGAT 1 cut(s) 63
BsaAI YACGTR 1 cut(s) 423
BsaHI GRCGYC 1 cut(s) 48
BsaJI CCNNGG 4 cut(s) 89, 407, 481, 825
BsaWI WCCGGW 1 cut(s) 618
Bsc4I CCNNNNNNNGG 6 cut(s) 95, 609, 625, 752, 826, 876
Bse118I RCCGGY 2 cut(s) 618, 876
Bse1I ACTGG 2 cut(s) 613, 1105
Bse3DI GCAATG 1 cut(s) 285
BseBI CCWGG 1 cut(s) 1002
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 4 cut(s) 89, 407, 481, 825
BseGI GGATG 2 cut(s) 630, 729
BseLI CCNNNNNNNGG 6 cut(s) 95, 609, 625, 752, 826, 876
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 5 cut(s) 39, 348, 501, 624, 963
BseNI ACTGG 2 cut(s) 613, 1105
BsePI GCGCGC 1 cut(s) 105
BseXI GCAGC 7 cut(s) 307, 729, 760, 772, 794, 894, 897
BsgI GTGCAG 1 cut(s) 314
Bsh1236I CGCG 2 cut(s) 107, 259
BshFI GGCC 3 cut(s) 406, 805, 880
BshNI GGYRCC 2 cut(s) 323, 934
BshTI ACCGGT 1 cut(s) 618
BshVI ATCGAT 1 cut(s) 63
BsiHKCI CYCGRG 1 cut(s) 1036
BsiSI CCGG 2 cut(s) 619, 877
BslFI GGGAC 1 cut(s) 625
BslI CCNNNNNNNGG 6 cut(s) 95, 609, 625, 752, 826, 876
BsmFI GGGAC 1 cut(s) 625
BsnI GGCC 3 cut(s) 406, 805, 880
BsoBI CYCGRG 1 cut(s) 1036
Bsp119I TTCGAA 1 cut(s) 750
Bsp143I GATC 6 cut(s) 5, 60, 64, 143, 519, 865
Bsp1720I GCTNAGC 1 cut(s) 565
BspACI CCGC 6 cut(s) 32, 259, 372, 403, 600, 945
BspANI GGCC 3 cut(s) 406, 805, 880
BspCNI CTCAG 5 cut(s) 38, 349, 502, 625, 964
BspDI ATCGAT 1 cut(s) 63
BspFNI CGCG 2 cut(s) 107, 259
BspLI GGNNCC 4 cut(s) 325, 630, 867, 936
BspPI GGATC 4 cut(s) 13, 59, 860, 873
BspT104I TTCGAA 1 cut(s) 750
BspT107I GGYRCC 2 cut(s) 323, 934
BsrDI GCAATG 1 cut(s) 285
BsrFI RCCGGY 2 cut(s) 618, 876
BsrI ACTGG 2 cut(s) 613, 1105
BssAI RCCGGY 2 cut(s) 618, 876
BssECI CCNNGG 4 cut(s) 89, 407, 481, 825
BssHII GCGCGC 1 cut(s) 105
BssMI GATC 6 cut(s) 5, 60, 64, 143, 519, 865
BssNI GRCGYC 1 cut(s) 48
BssSI CACGAG 1 cut(s) 456
BssT1I CCWWGG 2 cut(s) 407, 825
Bst2BI CACGAG 1 cut(s) 456
Bst2UI CCWGG 1 cut(s) 1002
Bst4CI ACNGT 4 cut(s) 485, 497, 544, 649
Bst6I CTCTTC 1 cut(s) 570
BstACI GRCGYC 1 cut(s) 48
BstBAI YACGTR 1 cut(s) 423
BstBI TTCGAA 1 cut(s) 750
BstC8I GCNNGC 3 cut(s) 107, 111, 328
BstDEI CTNAG 7 cut(s) 25, 307, 357, 510, 565, 633, 972
BstDSI CCRYGG 1 cut(s) 481
BstENI CCTNNNNNAGG 2 cut(s) 750, 824
BstF5I GGATG 2 cut(s) 630, 729
BstFNI CGCG 2 cut(s) 107, 259
BstHHI GCGC 5 cut(s) 107, 109, 259, 384, 445
BstKTI GATC 6 cut(s) 8, 63, 67, 146, 522, 868
BstMBI GATC 6 cut(s) 5, 60, 64, 143, 519, 865
BstMWI GCNNNNNNNGC 3 cut(s) 263, 779, 782
BstNI CCWGG 1 cut(s) 1002
BstNSI RCATGY 1 cut(s) 760
BstSCI CCNGG 1 cut(s) 1000
BstUI CGCG 2 cut(s) 107, 259
BstV1I GCAGC 7 cut(s) 307, 729, 760, 772, 794, 894, 897
BstV2I GAAGAC 1 cut(s) 1077
BstX2I RGATCY 2 cut(s) 5, 865
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 2 cut(s) 5, 865
Bsu15I ATCGAT 1 cut(s) 63
BsuRI GGCC 3 cut(s) 406, 805, 880
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 481
BtsCI GGATG 2 cut(s) 630, 729
BtsIMutI CAGTG 2 cut(s) 493, 1112
Cac8I GCNNGC 3 cut(s) 107, 111, 328
CaiI CAGNNNCTG 1 cut(s) 907
CfoI GCGC 5 cut(s) 107, 109, 259, 384, 445
Cfr10I RCCGGY 2 cut(s) 618, 876
Cfr13I GGNCC 2 cut(s) 86, 879
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 2 cut(s) 56, 704
Csp6I GTAC 3 cut(s) 121, 983, 1005
CspAI ACCGGT 1 cut(s) 618
CviAII CATG 6 cut(s) 343, 427, 662, 757, 852, 1066
CviQI GTAC 3 cut(s) 121, 983, 1005
DdeI CTNAG 7 cut(s) 25, 307, 357, 510, 565, 633, 972
DpnI GATC 6 cut(s) 7, 62, 66, 145, 521, 867
DpnII GATC 6 cut(s) 5, 60, 64, 143, 519, 865
EaeI YGGCCR 1 cut(s) 404
Eam1104I CTCTTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 570
EciI GGCGGA 1 cut(s) 387
Eco130I CCWWGG 2 cut(s) 407, 825
Eco47I GGWCC 1 cut(s) 86
Eco72I CACGTG 1 cut(s) 423
Eco88I CYCGRG 1 cut(s) 1036
EcoNI CCTNNNNNAGG 2 cut(s) 750, 824
EcoRII CCWGG 1 cut(s) 1000
EcoT14I CCWWGG 2 cut(s) 407, 825
ErhI CCWWGG 2 cut(s) 407, 825
FaeI CATG 6 cut(s) 346, 430, 665, 760, 855, 1069
FalI AAGNNNNNCTT 2 cut(s) 93, 125
FaqI GGGAC 1 cut(s) 625
FatI CATG 6 cut(s) 342, 426, 661, 756, 851, 1065
FauI CCCGC 1 cut(s) 952
Fnu4HI GCNGC 8 cut(s) 296, 404, 743, 774, 783, 786, 908, 911
FokI GGATG 2 cut(s) 637, 716
Fsp4HI GCNGC 8 cut(s) 296, 404, 743, 774, 783, 786, 908, 911
FspBI CTAG 2 cut(s) 368, 1008
FspI TGCGCA 1 cut(s) 383
GlaI GCGC 5 cut(s) 106, 108, 258, 383, 444
GluI GCNGC 8 cut(s) 296, 404, 743, 774, 783, 786, 908, 911
HaeIII GGCC 3 cut(s) 406, 805, 880
HapII CCGG 2 cut(s) 619, 877
HgaI GACGC 2 cut(s) 56, 704
HhaI GCGC 5 cut(s) 107, 109, 259, 384, 445
Hin1I GRCGYC 1 cut(s) 48
Hin1II CATG 6 cut(s) 346, 430, 665, 760, 855, 1069
Hin6I GCGC 5 cut(s) 105, 107, 257, 382, 443
HinP1I GCGC 5 cut(s) 105, 107, 257, 382, 443
HinfI GANTC 4 cut(s) 514, 578, 995, 1034
HpaII CCGG 2 cut(s) 619, 877
HphI GGTGA 2 cut(s) 880, 1052
Hpy166II GTNNAC 4 cut(s) 22, 121, 181, 694
Hpy188I TCNGA 3 cut(s) 90, 519, 973
Hpy188III TCNNGA 2 cut(s) 523, 632
Hpy8I GTNNAC 4 cut(s) 22, 121, 181, 694
HpyAV CCTTC 3 cut(s) 95, 119, 746
HpyCH4III ACNGT 4 cut(s) 485, 497, 544, 649
HpyCH4IV ACGT 1 cut(s) 422
HpyCH4V TGCA 6 cut(s) 295, 330, 426, 554, 710, 782
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 779, 782
HpyF3I CTNAG 7 cut(s) 25, 307, 357, 510, 565, 633, 972
HpySE526I ACGT 1 cut(s) 422
Hsp92I GRCGYC 1 cut(s) 48
Hsp92II CATG 6 cut(s) 346, 430, 665, 760, 855, 1069
HspAI GCGC 5 cut(s) 105, 107, 257, 382, 443
Kzo9I GATC 6 cut(s) 5, 60, 64, 143, 519, 865
LmnI GCTCC 1 cut(s) 634
Lsp1109I GCAGC 7 cut(s) 307, 729, 760, 772, 794, 894, 897
LweI GCATC 3 cut(s) 82, 175, 894
MaeI CTAG 2 cut(s) 368, 1008
MaeII ACGT 1 cut(s) 422
MaeIII GTNAC 7 cut(s) 212, 352, 497, 649, 844, 914, 1021
MalI GATC 6 cut(s) 7, 62, 66, 145, 521, 867
MboI GATC 6 cut(s) 5, 60, 64, 143, 519, 865
MboII GAAGA 3 cut(s) 356, 587, 1082
MfeI CAATTG 1 cut(s) 711
MflI RGATCY 2 cut(s) 5, 865
MluCI AATT 3 cut(s) 711, 763, 894
MlyI GAGTC 3 cut(s) 587, 1004, 1028
MmeI TCCRAC 2 cut(s) 836, 1080
MnlI CCTC 7 cut(s) 84, 261, 795, 830, 856, 929, 963
MseI TTAA 1 cut(s) 792
MslI CAYNNNNRTG 3 cut(s) 425, 619, 1064
MspA1I CMGCKG 1 cut(s) 785
MspI CCGG 2 cut(s) 619, 877
MspR9I CCNGG 1 cut(s) 1002
MunI CAATTG 1 cut(s) 711
MvaI CCWGG 1 cut(s) 1002
MvnI CGCG 2 cut(s) 107, 259
MwoI GCNNNNNNNGC 3 cut(s) 263, 779, 782
NdeII GATC 6 cut(s) 5, 60, 64, 143, 519, 865
NlaIII CATG 6 cut(s) 346, 430, 665, 760, 855, 1069
NlaIV GGNNCC 4 cut(s) 325, 630, 867, 936
NmeAIII GCCGAG 1 cut(s) 831
NmuCI GTSAC 2 cut(s) 352, 497
NsbI TGCGCA 1 cut(s) 383
NspI RCATGY 1 cut(s) 760
NspV TTCGAA 1 cut(s) 750
PauI GCGCGC 1 cut(s) 105
PfeI GAWTC 1 cut(s) 514
PinAI ACCGGT 1 cut(s) 618
PkrI GCNGC 8 cut(s) 297, 405, 744, 775, 784, 787, 909, 912
PleI GAGTC 3 cut(s) 586, 1003, 1028
PmaCI CACGTG 1 cut(s) 423
PmlI CACGTG 1 cut(s) 423
PpsI GAGTC 3 cut(s) 586, 1003, 1028
Ppu21I YACGTR 1 cut(s) 423
Psp6I CCWGG 1 cut(s) 1000
PspCI CACGTG 1 cut(s) 423
PspGI CCWGG 1 cut(s) 1000
PspN4I GGNNCC 4 cut(s) 325, 630, 867, 936
PspPI GGNCC 2 cut(s) 86, 879
PstNI CAGNNNCTG 1 cut(s) 907
PsuI RGATCY 2 cut(s) 5, 865
PteI GCGCGC 1 cut(s) 105
PvuII CAGCTG 1 cut(s) 785
RsaI GTAC 3 cut(s) 122, 984, 1006
RsaNI GTAC 3 cut(s) 121, 983, 1005
RseI CAYNNNNRTG 3 cut(s) 425, 619, 1064
SaqAI TTAA 1 cut(s) 792
SatI GCNGC 8 cut(s) 296, 404, 743, 774, 783, 786, 908, 911
Sau3AI GATC 6 cut(s) 5, 60, 64, 143, 519, 865
Sau96I GGNCC 2 cut(s) 86, 879
SchI GAGTC 3 cut(s) 587, 1004, 1028
ScrFI CCNGG 1 cut(s) 1002
SfaNI GCATC 3 cut(s) 82, 175, 894
SfuI TTCGAA 1 cut(s) 750
SinI GGWCC 1 cut(s) 86
SmiMI CAYNNNNRTG 3 cut(s) 425, 619, 1064
SpeI ACTAGT 1 cut(s) 1007
Sse9I AATT 3 cut(s) 711, 763, 894
SsiI CCGC 6 cut(s) 32, 259, 372, 403, 600, 945
SspMI CTAG 2 cut(s) 368, 1008
StyD4I CCNGG 1 cut(s) 1000
StyI CCWWGG 2 cut(s) 407, 825
TaaI ACNGT 4 cut(s) 485, 497, 544, 649
TaiI ACGT 1 cut(s) 425
TaqI TCGA 6 cut(s) 39, 63, 209, 287, 750, 761
TasI AATT 3 cut(s) 711, 763, 894
TatI WGTACW 1 cut(s) 982
TauI GCSGC 1 cut(s) 406
TfiI GAWTC 1 cut(s) 514
Tru1I TTAA 1 cut(s) 792
Tru9I TTAA 1 cut(s) 792
TscAI CASTG 2 cut(s) 500, 1112
TseFI GTSAC 2 cut(s) 352, 497
TseI GCWGC 7 cut(s) 295, 742, 773, 782, 785, 907, 910
Tsp45I GTSAC 2 cut(s) 352, 497
TspDTI ATGAA 2 cut(s) 307, 840
TspGWI ACGGA 1 cut(s) 973
TspRI CASTG 2 cut(s) 500, 1112
VpaK11BI GGWCC 1 cut(s) 86
XagI CCTNNNNNAGG 2 cut(s) 750, 824
XapI RAATTY 1 cut(s) 763
XceI RCATGY 1 cut(s) 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XspI CTAG 2 cut(s) 368, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.