pycom17g02000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
1254300 .. 1256280
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g02000.4

Sequence Viewer

Length: 1062 bp
ATGGGATCTGGAAATGGGGTTTATTCAGTTGGGAATTTCGATTTGGATGGCAAGTGGCTGATCGATCCAAAGCAACTTTTTGTTGGTCCGAGGATTGGGGAAGGCGCGCATGCCAAAGTGTACGAGGGAAAATATAAGAATCAAAATGTTGCTGTAAAAATTGTTCCTAGAGGAGAAACCCCAGAGGAGATTGCCAAGAGAGAAGGTCGGTTTGCGAGGGAAGTGGCAATGATGTCGAAAGTGCAGCACAAGAACTTAGTGAAGTTCATTGGTGCCTGCAAAGAACCTGTAATGGTCATAGTGACCGAGCTTCTTCTAGGCGGGACTTTGCGCAAATACTTGTTCAATATGCGGCCAAGGTGCTTGGACACATGTGTGGCGGTTGGGTTTGCGCTTGATATTGCTCGTGCTATGGAGTGCTTACACTCCCATGGAATCATTCACCGGGACCTGAAACCTGAGAATTTGATCTTGACCGCCGACCATAAAACCGTCAAACTTGCGGATTTTGGCTTAGCAAGGGAAGAGTCGTTGACAGAGATGATGACGGCTGAAACTGGGACATACCGGTGGATGGCTCCTGAGCTTTACAGCACAGTTACATTACGACATGGAGAGAAGAAGCATTACAATCATAAGGTGGACGCTTACAGCTTTGCAATTGTATTGTGGGAACTCATCCATAACAAGCTGCCTTTCGAAGGCATGTCAAATTTACAAGCAGCGTATGCAGCCGCTTTTAAGAATGTTAGGCCCAGTGCCGAAAGCCTACCTGAGGATTTGGCTCTGATCGTCACTTCATGTTGGAAAGAGGATCCCAATGACCGGCCCGACTTCACCCGAATTATACAGATGCTGCTGCATTACCTCTCTACTATTTGGGCACCAGCACCCGCTATCCCCCAACGGATATTCAAATCTGAGAATGCTGTACTCCCACCAGAGTCACCCGGTACTAGTTCATTGATGGCTACACACAACTCCGGTGAAACCACTAAAACCAACACGGACATGGAAGATAAAACTAGAGGTTTTTTCTCCTGCTTTAGACAGTGTTACTGA

Protein Analysis

354

Amino Acids

39.68

Weight (kDa)

8.08

Isoelectric Point (pI)

40.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 332
AccB1I GGYRCC 2 cut(s) 272, 883
AccII CGCG 1 cut(s) 107
AciI CCGC 7 cut(s) 321, 352, 380, 477, 503, 735, 894
AclWI GGATC 4 cut(s) 13, 59, 809, 822
AcoI YGGCCR 1 cut(s) 353
AcsI RAATTY 3 cut(s) 34, 463, 712
AfaI GTAC 3 cut(s) 122, 933, 955
AfiI CCNNNNNNNGG 5 cut(s) 95, 574, 701, 775, 825
AflIII ACRYGT 1 cut(s) 371
AgeI ACCGGT 1 cut(s) 567
AgsI TTSAA 2 cut(s) 346, 916
AhlI ACTAGT 1 cut(s) 956
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
AleI CACNNNNGTG 1 cut(s) 374
AluBI AGCT 4 cut(s) 310, 586, 654, 691
AluI AGCT 4 cut(s) 310, 586, 654, 691
AlwI GGATC 4 cut(s) 13, 59, 809, 822
AlwNI CAGNNNCTG 1 cut(s) 856
AoxI GGCC 3 cut(s) 353, 752, 827
ApeKI GCWGC 6 cut(s) 244, 691, 722, 731, 856, 859
ApoI RAATTY 3 cut(s) 34, 463, 712
AsiGI ACCGGT 1 cut(s) 567
AspLEI GCGC 4 cut(s) 107, 109, 333, 394
AspS9I GGNCC 4 cut(s) 86, 448, 753, 828
AsuC2I CCSGG 2 cut(s) 446, 951
AsuHPI GGTGA 4 cut(s) 434, 829, 939, 998
AsuII TTCGAA 1 cut(s) 699
AvaII GGWCC 2 cut(s) 86, 448
AxyI CCTNAGG 1 cut(s) 774
BaeGI GKGCMC 1 cut(s) 886
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 2 cut(s) 272, 883
BarI GAAGNNNNNNTAC 2 cut(s) 611, 643
BauI CACGAG 1 cut(s) 405
BbvI GCAGC 6 cut(s) 256, 678, 734, 743, 843, 846
BccI CCATC 3 cut(s) 41, 568, 961
BceAI ACGGC 1 cut(s) 564
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BcnI CCSGG 2 cut(s) 446, 951
BcuI ACTAGT 1 cut(s) 956
BfaI CTAG 4 cut(s) 168, 317, 957, 1026
BisI GCNGC 8 cut(s) 245, 353, 692, 723, 732, 735, 857, 860
BlpI GCTNAGC 1 cut(s) 514
BlsI GCNGC 8 cut(s) 246, 354, 693, 724, 733, 736, 858, 861
Bme1390I CCNGG 2 cut(s) 446, 951
Bme18I GGWCC 2 cut(s) 86, 448
BmgT120I GGNCC 4 cut(s) 86, 448, 753, 828
BmiI GGNNCC 5 cut(s) 274, 449, 579, 816, 885
BmrFI CCNGG 2 cut(s) 446, 951
BmrI ACTGGG 2 cut(s) 567, 750
BmsI GCATC 1 cut(s) 843
BmuI ACTGGG 2 cut(s) 567, 750
Bpu10I CCTNAGC 1 cut(s) 582
Bpu1102I GCTNAGC 1 cut(s) 514
Bpu14I TTCGAA 1 cut(s) 699
BpuMI CCSGG 2 cut(s) 446, 951
Bsa29I ATCGAT 1 cut(s) 63
BsaJI CCNNGG 3 cut(s) 89, 356, 430
BsaWI WCCGGW 2 cut(s) 567, 983
Bsc4I CCNNNNNNNGG 5 cut(s) 95, 574, 701, 775, 825
Bse118I RCCGGY 2 cut(s) 567, 825
Bse1I ACTGG 2 cut(s) 562, 756
Bse21I CCTNAGG 1 cut(s) 774
Bse3DI GCAATG 1 cut(s) 234
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 3 cut(s) 89, 356, 430
BseGI GGATG 3 cut(s) 52, 579, 678
BseLI CCNNNNNNNGG 5 cut(s) 95, 574, 701, 775, 825
BseMI GCAATG 1 cut(s) 234
BseMII CTCAG 4 cut(s) 450, 573, 765, 912
BseNI ACTGG 2 cut(s) 562, 756
BsePI GCGCGC 1 cut(s) 105
BseRI GAGGAG 2 cut(s) 186, 200
BseSI GKGCMC 1 cut(s) 886
BseXI GCAGC 6 cut(s) 256, 678, 734, 743, 843, 846
BsgI GTGCAG 1 cut(s) 263
Bsh1236I CGCG 1 cut(s) 107
BshFI GGCC 3 cut(s) 355, 754, 829
BshNI GGYRCC 2 cut(s) 272, 883
BshTI ACCGGT 1 cut(s) 567
BshVI ATCGAT 1 cut(s) 63
BsiSI CCGG 5 cut(s) 445, 568, 826, 951, 984
BslFI GGGAC 3 cut(s) 337, 461, 574
BslI CCNNNNNNNGG 5 cut(s) 95, 574, 701, 775, 825
BsmFI GGGAC 3 cut(s) 337, 461, 574
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 3 cut(s) 355, 754, 829
Bsp119I TTCGAA 1 cut(s) 699
Bsp1286I GDGCHC 1 cut(s) 886
Bsp143I GATC 6 cut(s) 5, 60, 64, 468, 789, 814
Bsp1720I GCTNAGC 1 cut(s) 514
Bsp19I CCATGG 1 cut(s) 430
BspACI CCGC 7 cut(s) 321, 352, 380, 477, 503, 735, 894
BspANI GGCC 3 cut(s) 355, 754, 829
BspCNI CTCAG 4 cut(s) 451, 574, 766, 913
BspDI ATCGAT 1 cut(s) 63
BspFNI CGCG 1 cut(s) 107
BspLI GGNNCC 5 cut(s) 274, 449, 579, 816, 885
BspPI GGATC 4 cut(s) 13, 59, 809, 822
BspT104I TTCGAA 1 cut(s) 699
BspT107I GGYRCC 2 cut(s) 272, 883
BsrDI GCAATG 1 cut(s) 234
BsrFI RCCGGY 2 cut(s) 567, 825
BsrI ACTGG 2 cut(s) 562, 756
BssAI RCCGGY 2 cut(s) 567, 825
BssECI CCNNGG 3 cut(s) 89, 356, 430
BssHII GCGCGC 1 cut(s) 105
BssMI GATC 6 cut(s) 5, 60, 64, 468, 789, 814
BssSI CACGAG 1 cut(s) 405
BssT1I CCWWGG 2 cut(s) 356, 430
Bst2BI CACGAG 1 cut(s) 405
Bst4CI ACNGT 3 cut(s) 493, 598, 1053
Bst6I CTCTTC 1 cut(s) 519
BstAPI GCANNNNNTGC 1 cut(s) 728
BstBI TTCGAA 1 cut(s) 699
BstC8I GCNNGC 3 cut(s) 107, 111, 277
BstDEI CTNAG 6 cut(s) 256, 459, 514, 582, 774, 921
BstDSI CCRYGG 1 cut(s) 430
BstENI CCTNNNNNAGG 2 cut(s) 699, 773
BstF5I GGATG 3 cut(s) 52, 579, 678
BstFNI CGCG 1 cut(s) 107
BstHHI GCGC 4 cut(s) 107, 109, 333, 394
BstKTI GATC 6 cut(s) 8, 63, 67, 471, 792, 817
BstMBI GATC 6 cut(s) 5, 60, 64, 468, 789, 814
BstMWI GCNNNNNNNGC 2 cut(s) 728, 731
BstNSI RCATGY 3 cut(s) 113, 375, 709
BstSCI CCNGG 2 cut(s) 444, 949
BstSLI GKGCMC 1 cut(s) 886
BstUI CGCG 1 cut(s) 107
BstV1I GCAGC 6 cut(s) 256, 678, 734, 743, 843, 846
BstX2I RGATCY 2 cut(s) 5, 814
BstYI RGATCY 2 cut(s) 5, 814
Bsu15I ATCGAT 1 cut(s) 63
Bsu36I CCTNAGG 1 cut(s) 774
BsuRI GGCC 3 cut(s) 355, 754, 829
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 430
BtsCI GGATG 3 cut(s) 52, 579, 678
BtsIMutI CAGTG 2 cut(s) 763, 1058
Cac8I GCNNGC 3 cut(s) 107, 111, 277
CaiI CAGNNNCTG 1 cut(s) 856
CfoI GCGC 4 cut(s) 107, 109, 333, 394
Cfr10I RCCGGY 2 cut(s) 567, 825
Cfr13I GGNCC 4 cut(s) 86, 448, 753, 828
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 1 cut(s) 653
Csp6I GTAC 3 cut(s) 121, 932, 954
CspAI ACCGGT 1 cut(s) 567
CviAII CATG 7 cut(s) 110, 372, 431, 611, 706, 801, 1012
CviQI GTAC 3 cut(s) 121, 932, 954
DdeI CTNAG 6 cut(s) 256, 459, 514, 582, 774, 921
DpnI GATC 6 cut(s) 7, 62, 66, 470, 791, 816
DpnII GATC 6 cut(s) 5, 60, 64, 468, 789, 814
EaeI YGGCCR 1 cut(s) 353
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Eco130I CCWWGG 2 cut(s) 356, 430
Eco47I GGWCC 2 cut(s) 86, 448
Eco81I CCTNAGG 1 cut(s) 774
EcoNI CCTNNNNNAGG 2 cut(s) 699, 773
EcoO109I RGGNCCY 1 cut(s) 448
EcoT14I CCWWGG 2 cut(s) 356, 430
ErhI CCWWGG 2 cut(s) 356, 430
FaeI CATG 7 cut(s) 113, 375, 434, 614, 709, 804, 1015
FaqI GGGAC 3 cut(s) 337, 461, 574
FatI CATG 7 cut(s) 109, 371, 430, 610, 705, 800, 1011
FauI CCCGC 2 cut(s) 314, 901
Fnu4HI GCNGC 8 cut(s) 245, 353, 692, 723, 732, 735, 857, 860
FokI GGATG 3 cut(s) 59, 586, 665
Fsp4HI GCNGC 8 cut(s) 245, 353, 692, 723, 732, 735, 857, 860
FspBI CTAG 4 cut(s) 168, 317, 957, 1026
FspI TGCGCA 1 cut(s) 332
GlaI GCGC 4 cut(s) 106, 108, 332, 393
GluI GCNGC 8 cut(s) 245, 353, 692, 723, 732, 735, 857, 860
HaeIII GGCC 3 cut(s) 355, 754, 829
HapII CCGG 5 cut(s) 445, 568, 826, 951, 984
HgaI GACGC 1 cut(s) 653
HhaI GCGC 4 cut(s) 107, 109, 333, 394
Hin1II CATG 7 cut(s) 113, 375, 434, 614, 709, 804, 1015
Hin6I GCGC 4 cut(s) 105, 107, 331, 392
HinP1I GCGC 4 cut(s) 105, 107, 331, 392
HincII GTYRAC 1 cut(s) 534
HindII GTYRAC 1 cut(s) 534
HinfI GANTC 4 cut(s) 139, 435, 527, 944
HpaII CCGG 5 cut(s) 445, 568, 826, 951, 984
HphI GGTGA 4 cut(s) 434, 829, 939, 998
Hpy166II GTNNAC 3 cut(s) 121, 534, 643
Hpy188I TCNGA 3 cut(s) 90, 789, 922
Hpy188III TCNNGA 3 cut(s) 9, 472, 581
Hpy8I GTNNAC 3 cut(s) 121, 534, 643
HpyAV CCTTC 3 cut(s) 95, 197, 695
HpyCH4III ACNGT 3 cut(s) 493, 598, 1053
HpyCH4V TGCA 5 cut(s) 244, 279, 659, 731, 862
HpyF10VI GCNNNNNNNGC 2 cut(s) 728, 731
HpyF3I CTNAG 6 cut(s) 256, 459, 514, 582, 774, 921
Hsp92II CATG 7 cut(s) 113, 375, 434, 614, 709, 804, 1015
HspAI GCGC 4 cut(s) 105, 107, 331, 392
Kzo9I GATC 6 cut(s) 5, 60, 64, 468, 789, 814
LmnI GCTCC 1 cut(s) 583
Lsp1109I GCAGC 6 cut(s) 256, 678, 734, 743, 843, 846
LweI GCATC 1 cut(s) 843
MaeI CTAG 4 cut(s) 168, 317, 957, 1026
MaeIII GTNAC 5 cut(s) 301, 598, 793, 945, 1055
MalI GATC 6 cut(s) 7, 62, 66, 470, 791, 816
MboI GATC 6 cut(s) 5, 60, 64, 468, 789, 814
MboII GAAGA 4 cut(s) 305, 536, 631, 1028
MfeI CAATTG 1 cut(s) 660
MflI RGATCY 2 cut(s) 5, 814
MhlI GDGCHC 1 cut(s) 886
MluCI AATT 6 cut(s) 34, 159, 463, 660, 712, 843
MlyI GAGTC 2 cut(s) 536, 953
MmeI TCCRAC 1 cut(s) 785
MnlI CCTC 9 cut(s) 84, 118, 164, 178, 210, 769, 805, 878, 1022
MseI TTAA 1 cut(s) 741
MslI CAYNNNNRTG 4 cut(s) 374, 429, 568, 1010
MspI CCGG 5 cut(s) 445, 568, 826, 951, 984
MspR9I CCNGG 2 cut(s) 446, 951
MunI CAATTG 1 cut(s) 660
Mva1269I GAATGC 1 cut(s) 931
MvnI CGCG 1 cut(s) 107
MwoI GCNNNNNNNGC 2 cut(s) 728, 731
NciI CCSGG 2 cut(s) 446, 951
NcoI CCATGG 1 cut(s) 430
NdeII GATC 6 cut(s) 5, 60, 64, 468, 789, 814
NlaIII CATG 7 cut(s) 113, 375, 434, 614, 709, 804, 1015
NlaIV GGNNCC 5 cut(s) 274, 449, 579, 816, 885
NmuCI GTSAC 3 cut(s) 301, 793, 945
NsbI TGCGCA 1 cut(s) 332
NspI RCATGY 3 cut(s) 113, 375, 709
NspV TTCGAA 1 cut(s) 699
OliI CACNNNNGTG 1 cut(s) 374
PaeI GCATGC 1 cut(s) 113
PauI GCGCGC 1 cut(s) 105
PciI ACATGT 1 cut(s) 371
PctI GAATGC 1 cut(s) 931
PfeI GAWTC 2 cut(s) 139, 435
PinAI ACCGGT 1 cut(s) 567
PkrI GCNGC 8 cut(s) 246, 354, 693, 724, 733, 736, 858, 861
PleI GAGTC 2 cut(s) 535, 952
PpsI GAGTC 2 cut(s) 535, 952
PpuMI RGGWCCY 1 cut(s) 448
PscI ACATGT 1 cut(s) 371
Psp5II RGGWCCY 1 cut(s) 448
PspN4I GGNNCC 5 cut(s) 274, 449, 579, 816, 885
PspPI GGNCC 4 cut(s) 86, 448, 753, 828
PspPPI RGGWCCY 1 cut(s) 448
PsrI GAACNNNNNNTAC 2 cut(s) 147, 179
PstNI CAGNNNCTG 1 cut(s) 856
PsuI RGATCY 2 cut(s) 5, 814
PteI GCGCGC 1 cut(s) 105
RsaI GTAC 3 cut(s) 122, 933, 955
RsaNI GTAC 3 cut(s) 121, 932, 954
RseI CAYNNNNRTG 4 cut(s) 374, 429, 568, 1010
SaqAI TTAA 1 cut(s) 741
SatI GCNGC 8 cut(s) 245, 353, 692, 723, 732, 735, 857, 860
Sau3AI GATC 6 cut(s) 5, 60, 64, 468, 789, 814
Sau96I GGNCC 4 cut(s) 86, 448, 753, 828
SchI GAGTC 2 cut(s) 536, 953
ScrFI CCNGG 2 cut(s) 446, 951
SduI GDGCHC 1 cut(s) 886
SfaNI GCATC 1 cut(s) 843
SfuI TTCGAA 1 cut(s) 699
SinI GGWCC 2 cut(s) 86, 448
SmiMI CAYNNNNRTG 4 cut(s) 374, 429, 568, 1010
SpeI ACTAGT 1 cut(s) 956
SphI GCATGC 1 cut(s) 113
Sse9I AATT 6 cut(s) 34, 159, 463, 660, 712, 843
SsiI CCGC 7 cut(s) 321, 352, 380, 477, 503, 735, 894
SspMI CTAG 4 cut(s) 168, 317, 957, 1026
StyD4I CCNGG 2 cut(s) 444, 949
StyI CCWWGG 2 cut(s) 356, 430
TaaI ACNGT 3 cut(s) 493, 598, 1053
TaqI TCGA 4 cut(s) 39, 63, 236, 699
TaqII GACCGA 1 cut(s) 320
TasI AATT 6 cut(s) 34, 159, 463, 660, 712, 843
TatI WGTACW 1 cut(s) 931
TauI GCSGC 2 cut(s) 355, 737
TfiI GAWTC 2 cut(s) 139, 435
Tru1I TTAA 1 cut(s) 741
Tru9I TTAA 1 cut(s) 741
TscAI CASTG 2 cut(s) 763, 1058
TseFI GTSAC 3 cut(s) 301, 793, 945
TseI GCWGC 6 cut(s) 244, 691, 722, 731, 856, 859
Tsp45I GTSAC 3 cut(s) 301, 793, 945
TspDTI ATGAA 3 cut(s) 256, 789, 951
TspGWI ACGGA 2 cut(s) 922, 1022
TspRI CASTG 2 cut(s) 763, 1058
VpaK11BI GGWCC 2 cut(s) 86, 448
XagI CCTNNNNNAGG 2 cut(s) 699, 773
XapI RAATTY 3 cut(s) 34, 463, 712
XceI RCATGY 3 cut(s) 113, 375, 709
XcmI CCANNNNNNNNNTGG 1 cut(s) 1009
XspI CTAG 4 cut(s) 168, 317, 957, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.