Rorug02G0566000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
69092040 .. 69094521
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0566000.1

Sequence Viewer

Length: 1299 bp
ATGAGGTTTGTTGTATCAGCTCTATTCCTTCTTGTCATCTTTTCATATGCAGCTGCATTTGATCCCTTGGATCCAAATGGAAACATAACCATACGATGGGACATAATGTCTTGGACACCAGATGGCTATGTGGCAACTGTAACCTTAAACAACTTCCAAATGTATCGGCACATAATGAGCCCTGGGTGGACATTGGGTTGGACATGGGCTAAAAAAGAAGTGATATGGTCCGCGGTGGGAGCACAAACCACCGAGCAAGGTGACTGCTCCAAGTTCAAAGGGAACATACCTCATTGTTGCAAGAAAACCCCCACAGTCGTGGACTTGCTTCCCGGCGTGCCTTACAACCAGCAATACCAAAACTGTTGCAAAGGTGGAGTAGTGGGTGCTTGGGGCCAAGATCCTTCAGCTTCTGTCTCGGCCTTCCAGCTGAGTGTTGGAATGGCCGGTACTTCAAACAAGACTGTGAAACTCCCCAGGAACTTCACTCTGCTAGGACCAGGTCCAGGGTACACTTGCGGCAAGGCTAAAGTTGTGCCTCCCACCATCTTTTTGTCACCTGATCGTCGTCGTAAGACTCAAGCTCTCATGACTTGGAATGTGACTTGTACTTATTCACAGCTTCTGGCCCGTAAAAACCCAAGTTGTTGTGTATCACTCTCTTCTTTCTACAACGAAACAATTGTTCCCTGCCCATCTTGTTCTTGTGGTTGCCATAACAAGGACAGTTGTGTCAAAAGCAACTCGAAACTTCTGAGCATGGTGGGAGTTAACACCCCAAAGAAAGACAATGCCCCTCTTTTGCAGTGCACACACCACATGTGCCCGATAAGGATTCACTGGCATGTGAAAGTGAATTACAAGGAGTACTGGCGTGTGAAGGTTTCAGTTACAAACTTTAACTATCGGATGAACTACACACTTTGGACTCTGGTCATTCAGCACCCTAATCTCAACAATGTCACACAAGTTTTCAGCTTTGACTACAAGCCTCTTGTTCCTTACGAGTCCATAAATGACACTGGTATGTTCTATGGATTGAAATACTTCAATGACCAATTAATGGAAGCCGGGCCATTTGGGAACGTTCAGTCGGAGATTCTTCTTAAGAAGGACATAAACACATTTACTTTCAAGGAGGGGTGGGCATTTCCCCGCAAAGTTTACTTCAATGGTGATGAGTGCCAGATGCCCCCACCTGATACATACCCATTTCTGCCTAATTCTGCCCATCAAAATCTACTTTCATTCTCAGCATTGGTTTCCACATTAATTTTCTTGTTGATTGCTATTTGGTGA

Protein Analysis

432

Amino Acids

48.66

Weight (kDa)

9.02

Isoelectric Point (pI)

34.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COBRA PF04833 43 - 206 1.6e-66 COBRA-like protein
COB_C PF25079 215 - 404 5.8e-54 COBRA family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 731
AccB7I CCANNNNNTGG 2 cut(s) 96, 1063
AccII CGCG 1 cut(s) 233
AciI CCGC 4 cut(s) 231, 233, 519, 1156
AclI AACGTT 1 cut(s) 1086
AclWI GGATC 4 cut(s) 56, 65, 78, 395
AcoI YGGCCR 1 cut(s) 444
AcuI CTGAAG 1 cut(s) 390
AfaI GTAC 4 cut(s) 451, 512, 610, 869
AfiI CCNNNNNNNGG 4 cut(s) 96, 506, 721, 1063
AflII CTTAAG 1 cut(s) 1106
AflIII ACRYGT 1 cut(s) 819
AgsI TTSAA 6 cut(s) 277, 456, 1042, 1051, 1135, 1171
AhdI GACNNNNNGTC 1 cut(s) 106
AjnI CCWGG 4 cut(s) 181, 476, 499, 505
AleI CACNNNNGTG 1 cut(s) 317
AluBI AGCT 7 cut(s) 20, 53, 410, 430, 584, 622, 978
AluI AGCT 7 cut(s) 20, 53, 410, 430, 584, 622, 978
Alw21I GWGCWC 2 cut(s) 244, 812
Alw26I GTCTC 1 cut(s) 421
Alw44I GTGCAC 1 cut(s) 808
AlwI GGATC 4 cut(s) 56, 65, 78, 395
AlwNI CAGNNNCTG 2 cut(s) 413, 625
AoxI GGCC 5 cut(s) 394, 420, 444, 627, 1073
ApaLI GTGCAC 1 cut(s) 808
ApeKI GCWGC 2 cut(s) 50, 53
AseI ATTAAT 2 cut(s) 1061, 1271
Asp700I GAANNNNTTC 1 cut(s) 1046
AspS9I GGNCC 6 cut(s) 228, 394, 497, 503, 628, 1073
AsuC2I CCSGG 2 cut(s) 333, 1072
AsuHPI GGTGA 3 cut(s) 272, 549, 1187
AvaII GGWCC 3 cut(s) 228, 497, 503
BaeGI GKGCMC 2 cut(s) 812, 827
BamHI GGATCC 1 cut(s) 70
BanII GRGCYC 1 cut(s) 182
Bbv12I GWGCWC 2 cut(s) 244, 812
BbvI GCAGC 2 cut(s) 40, 62
BccI CCATC 5 cut(s) 90, 116, 554, 703, 1239
BciT130I CCWGG 4 cut(s) 183, 478, 501, 507
BcnI CCSGG 2 cut(s) 333, 1072
BcoDI GTCTC 1 cut(s) 421
BfaI CTAG 1 cut(s) 494
BfrI CTTAAG 1 cut(s) 1106
BisI GCNGC 3 cut(s) 51, 54, 520
BlsI GCNGC 3 cut(s) 52, 55, 521
BmcAI AGTACT 1 cut(s) 869
Bme1390I CCNGG 6 cut(s) 183, 333, 478, 501, 507, 1072
Bme18I GGWCC 3 cut(s) 228, 497, 503
BmeRI GACNNNNNGTC 1 cut(s) 106
BmgT120I GGNCC 6 cut(s) 228, 394, 497, 503, 628, 1073
BmiI GGNNCC 2 cut(s) 72, 395
BmrFI CCNGG 6 cut(s) 183, 333, 478, 501, 507, 1072
BmsI GCATC 1 cut(s) 1179
BoxI GACNNNNGTC 1 cut(s) 932
BpuEI CTTGAG 1 cut(s) 564
BpuMI CCSGG 2 cut(s) 333, 1072
BsaJI CCNNGG 6 cut(s) 66, 181, 182, 231, 476, 506
Bsc4I CCNNNNNNNGG 4 cut(s) 96, 506, 721, 1063
Bse118I RCCGGY 1 cut(s) 446
Bse1I ACTGG 3 cut(s) 845, 875, 1027
BseBI CCWGG 4 cut(s) 183, 478, 501, 507
BseDI CCNNGG 6 cut(s) 66, 181, 182, 231, 476, 506
BseGI GGATG 1 cut(s) 915
BseLI CCNNNNNNNGG 4 cut(s) 96, 506, 721, 1063
BseMII CTCAG 3 cut(s) 422, 746, 1266
BseNI ACTGG 3 cut(s) 845, 875, 1027
BseSI GKGCMC 2 cut(s) 812, 827
BseXI GCAGC 2 cut(s) 40, 62
Bsh1236I CGCG 1 cut(s) 233
BshFI GGCC 5 cut(s) 396, 422, 446, 629, 1075
BsiHKAI GWGCWC 2 cut(s) 244, 812
BsiSI CCGG 3 cut(s) 333, 447, 1071
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 4 cut(s) 96, 506, 721, 1063
BsmAI GTCTC 1 cut(s) 421
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 5 cut(s) 396, 422, 446, 629, 1075
Bsp1286I GDGCHC 4 cut(s) 182, 244, 812, 827
Bsp143I GATC 4 cut(s) 61, 70, 400, 562
BspACI CCGC 4 cut(s) 231, 233, 519, 1156
BspANI GGCC 5 cut(s) 396, 422, 446, 629, 1075
BspCNI CTCAG 3 cut(s) 423, 747, 1265
BspFNI CGCG 1 cut(s) 233
BspHI TCATGA 1 cut(s) 588
BspLI GGNNCC 2 cut(s) 72, 395
BspPI GGATC 4 cut(s) 56, 65, 78, 395
BspTI CTTAAG 1 cut(s) 1106
BsrFI RCCGGY 1 cut(s) 446
BsrI ACTGG 3 cut(s) 845, 875, 1027
BssAI RCCGGY 1 cut(s) 446
BssECI CCNNGG 6 cut(s) 66, 181, 182, 231, 476, 506
BssMI GATC 4 cut(s) 61, 70, 400, 562
BssT1I CCWWGG 1 cut(s) 66
Bst2UI CCWGG 4 cut(s) 183, 478, 501, 507
Bst4CI ACNGT 5 cut(s) 139, 316, 365, 466, 728
Bst6I CTCTTC 1 cut(s) 667
BstAFI CTTAAG 1 cut(s) 1106
BstC8I GCNNGC 1 cut(s) 338
BstDEI CTNAG 3 cut(s) 431, 755, 1252
BstDSI CCRYGG 1 cut(s) 231
BstF5I GGATG 1 cut(s) 915
BstFNI CGCG 1 cut(s) 233
BstKTI GATC 4 cut(s) 64, 73, 403, 565
BstMAI GTCTC 1 cut(s) 421
BstMBI GATC 4 cut(s) 61, 70, 400, 562
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstNI CCWGG 4 cut(s) 183, 478, 501, 507
BstNSI RCATGY 2 cut(s) 823, 848
BstPAI GACNNNNGTC 1 cut(s) 932
BstSCI CCNGG 6 cut(s) 181, 331, 476, 499, 505, 1070
BstSLI GKGCMC 2 cut(s) 812, 827
BstUI CGCG 1 cut(s) 233
BstV1I GCAGC 2 cut(s) 40, 62
BstX2I RGATCY 2 cut(s) 70, 400
BstXI CCANNNNNNTGG 1 cut(s) 319
BstYI RGATCY 2 cut(s) 70, 400
BsuRI GGCC 5 cut(s) 396, 422, 446, 629, 1075
BtgI CCRYGG 1 cut(s) 231
BtsCI GGATG 1 cut(s) 915
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 3 cut(s) 812, 838, 1020
Cac8I GCNNGC 1 cut(s) 338
CaiI CAGNNNCTG 2 cut(s) 413, 625
CciI TCATGA 1 cut(s) 588
Cfr10I RCCGGY 1 cut(s) 446
Cfr13I GGNCC 6 cut(s) 228, 394, 497, 503, 628, 1073
Cfr42I CCGCGG 1 cut(s) 234
CsiI ACCWGGT 1 cut(s) 499
Csp6I GTAC 4 cut(s) 450, 511, 609, 868
CviAII CATG 5 cut(s) 204, 589, 760, 820, 845
CviQI GTAC 4 cut(s) 450, 511, 609, 868
DdeI CTNAG 3 cut(s) 431, 755, 1252
DpnI GATC 4 cut(s) 63, 72, 402, 564
DpnII GATC 4 cut(s) 61, 70, 400, 562
DrdI GACNNNNNNGTC 1 cut(s) 731
DriI GACNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 731
EaeI YGGCCR 1 cut(s) 444
Eam1104I CTCTTC 1 cut(s) 667
Eam1105I GACNNNNNGTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 667
Eco130I CCWWGG 1 cut(s) 66
Eco24I GRGCYC 1 cut(s) 182
Eco47I GGWCC 3 cut(s) 228, 497, 503
Eco57I CTGAAG 1 cut(s) 390
EcoRII CCWGG 4 cut(s) 181, 476, 499, 505
EcoT14I CCWWGG 1 cut(s) 66
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 1 cut(s) 66
FaeI CATG 5 cut(s) 207, 592, 763, 823, 848
FaqI GGGAC 1 cut(s) 113
FatI CATG 5 cut(s) 203, 588, 759, 819, 844
FauI CCCGC 1 cut(s) 1163
FauNDI CATATG 1 cut(s) 46
Fnu4HI GCNGC 3 cut(s) 51, 54, 520
FokI GGATG 1 cut(s) 922
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 3 cut(s) 51, 54, 520
FspBI CTAG 1 cut(s) 494
GluI GCNGC 3 cut(s) 51, 54, 520
HaeIII GGCC 5 cut(s) 396, 422, 446, 629, 1075
HapII CCGG 3 cut(s) 333, 447, 1071
Hin1II CATG 5 cut(s) 207, 592, 763, 823, 848
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HinfI GANTC 5 cut(s) 577, 835, 928, 1007, 1099
HpaI GTTAAC 1 cut(s) 772
HpaII CCGG 3 cut(s) 333, 447, 1071
HphI GGTGA 3 cut(s) 272, 549, 1187
Hpy166II GTNNAC 6 cut(s) 189, 322, 513, 772, 810, 1165
Hpy188I TCNGA 3 cut(s) 756, 909, 1096
Hpy188III TCNNGA 1 cut(s) 589
Hpy8I GTNNAC 6 cut(s) 189, 322, 513, 772, 810, 1165
Hpy99I CGWCG 2 cut(s) 570, 573
HpyAV CCTTC 5 cut(s) 38, 414, 433, 874, 1105
HpyCH4III ACNGT 5 cut(s) 139, 316, 365, 466, 728
HpyCH4IV ACGT 1 cut(s) 1086
HpyCH4V TGCA 6 cut(s) 50, 56, 300, 369, 805, 810
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 3 cut(s) 431, 755, 1252
HpySE526I ACGT 1 cut(s) 1086
Hsp92II CATG 5 cut(s) 207, 592, 763, 823, 848
KspAI GTTAAC 1 cut(s) 772
KspI CCGCGG 1 cut(s) 234
Kzo9I GATC 4 cut(s) 61, 70, 400, 562
LmnI GCTCC 2 cut(s) 239, 272
Lsp1109I GCAGC 2 cut(s) 40, 62
LweI GCATC 1 cut(s) 1179
MabI ACCWGGT 1 cut(s) 499
MaeI CTAG 1 cut(s) 494
MaeII ACGT 1 cut(s) 1086
MaeIII GTNAC 6 cut(s) 139, 260, 555, 601, 889, 961
MalI GATC 4 cut(s) 63, 72, 402, 564
MboI GATC 4 cut(s) 61, 70, 400, 562
MboII GAAGA 2 cut(s) 654, 1094
MfeI CAATTG 1 cut(s) 681
MflI RGATCY 2 cut(s) 70, 400
MhlI GDGCHC 4 cut(s) 182, 244, 812, 827
MluCI AATT 5 cut(s) 681, 856, 1058, 1222, 1272
MlyI GAGTC 3 cut(s) 571, 922, 1016
MmeI TCCRAC 3 cut(s) 179, 418, 1074
MnlI CCTC 5 cut(s) 300, 549, 807, 1002, 1132
MroXI GAANNNNTTC 1 cut(s) 1046
MseI TTAA 6 cut(s) 146, 771, 900, 1061, 1107, 1271
MslI CAYNNNNRTG 3 cut(s) 317, 843, 1025
MspA1I CMGCKG 3 cut(s) 53, 233, 430
MspCI CTTAAG 1 cut(s) 1106
MspI CCGG 3 cut(s) 333, 447, 1071
MspR9I CCNGG 6 cut(s) 183, 333, 478, 501, 507, 1072
MunI CAATTG 1 cut(s) 681
MvaI CCWGG 4 cut(s) 183, 478, 501, 507
MvnI CGCG 1 cut(s) 233
MwoI GCNNNNNNNGC 1 cut(s) 239
NciI CCSGG 2 cut(s) 333, 1072
NdeI CATATG 1 cut(s) 46
NdeII GATC 4 cut(s) 61, 70, 400, 562
NlaIII CATG 5 cut(s) 207, 592, 763, 823, 848
NlaIV GGNNCC 2 cut(s) 72, 395
NmeAIII GCCGAG 1 cut(s) 398
NmuCI GTSAC 4 cut(s) 260, 555, 601, 961
NspI RCATGY 2 cut(s) 823, 848
OliI CACNNNNGTG 1 cut(s) 317
PagI TCATGA 1 cut(s) 588
PasI CCCWGGG 1 cut(s) 182
PciI ACATGT 1 cut(s) 819
PdmI GAANNNNTTC 1 cut(s) 1046
PfeI GAWTC 2 cut(s) 835, 1099
PflFI GACNNNGTC 1 cut(s) 501
PflMI CCANNNNNTGG 2 cut(s) 96, 1063
PkrI GCNGC 3 cut(s) 52, 55, 521
PleI GAGTC 3 cut(s) 571, 922, 1015
PpsI GAGTC 3 cut(s) 571, 922, 1015
PscI ACATGT 1 cut(s) 819
PshAI GACNNNNGTC 1 cut(s) 932
PshBI ATTAAT 2 cut(s) 1061, 1271
Psp1406I AACGTT 1 cut(s) 1086
Psp6I CCWGG 4 cut(s) 181, 476, 499, 505
PspGI CCWGG 4 cut(s) 181, 476, 499, 505
PspN4I GGNNCC 2 cut(s) 72, 395
PspPI GGNCC 6 cut(s) 228, 394, 497, 503, 628, 1073
PstNI CAGNNNCTG 2 cut(s) 413, 625
PsuI RGATCY 2 cut(s) 70, 400
PsyI GACNNNGTC 1 cut(s) 501
PvuII CAGCTG 2 cut(s) 53, 430
RsaI GTAC 4 cut(s) 451, 512, 610, 869
RsaNI GTAC 4 cut(s) 450, 511, 609, 868
RseI CAYNNNNRTG 3 cut(s) 317, 843, 1025
SacII CCGCGG 1 cut(s) 234
SaqAI TTAA 6 cut(s) 146, 771, 900, 1061, 1107, 1271
SatI GCNGC 3 cut(s) 51, 54, 520
Sau3AI GATC 4 cut(s) 61, 70, 400, 562
Sau96I GGNCC 6 cut(s) 228, 394, 497, 503, 628, 1073
ScaI AGTACT 1 cut(s) 869
SchI GAGTC 3 cut(s) 571, 922, 1016
ScrFI CCNGG 6 cut(s) 183, 333, 478, 501, 507, 1072
SduI GDGCHC 4 cut(s) 182, 244, 812, 827
SexAI ACCWGGT 1 cut(s) 499
SfaNI GCATC 1 cut(s) 1179
Sfr303I CCGCGG 1 cut(s) 234
SgrBI CCGCGG 1 cut(s) 234
SinI GGWCC 3 cut(s) 228, 497, 503
SmiMI CAYNNNNRTG 3 cut(s) 317, 843, 1025
SmlI CTYRAG 2 cut(s) 579, 1106
SmoI CTYRAG 2 cut(s) 579, 1106
Sse9I AATT 5 cut(s) 681, 856, 1058, 1222, 1272
SsiI CCGC 4 cut(s) 231, 233, 519, 1156
SspMI CTAG 1 cut(s) 494
StyD4I CCNGG 6 cut(s) 181, 331, 476, 499, 505, 1070
StyI CCWWGG 1 cut(s) 66
TaaI ACNGT 5 cut(s) 139, 316, 365, 466, 728
TaiI ACGT 1 cut(s) 1089
TaqI TCGA 1 cut(s) 746
TasI AATT 5 cut(s) 681, 856, 1058, 1222, 1272
TatI WGTACW 2 cut(s) 608, 867
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 2 cut(s) 835, 1099
Tru1I TTAA 6 cut(s) 146, 771, 900, 1061, 1107, 1271
Tru9I TTAA 6 cut(s) 146, 771, 900, 1061, 1107, 1271
TscAI CASTG 3 cut(s) 812, 845, 1027
TseFI GTSAC 4 cut(s) 260, 555, 601, 961
TseI GCWGC 2 cut(s) 50, 53
Tsp45I GTSAC 4 cut(s) 260, 555, 601, 961
TspDTI ATGAA 3 cut(s) 33, 926, 1236
TspRI CASTG 3 cut(s) 812, 845, 1027
Tth111I GACNNNGTC 1 cut(s) 501
Van91I CCANNNNNTGG 2 cut(s) 96, 1063
Vha464I CTTAAG 1 cut(s) 1106
VneI GTGCAC 1 cut(s) 808
VpaK11BI GGWCC 3 cut(s) 228, 497, 503
VspI ATTAAT 2 cut(s) 1061, 1271
XceI RCATGY 2 cut(s) 823, 848
XcmI CCANNNNNNNNNTGG 1 cut(s) 434
XmnI GAANNNNTTC 1 cut(s) 1046
XspI CTAG 1 cut(s) 494
ZrmI AGTACT 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.