Rh2AG646300
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
86683593 .. 86686331
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG646300.1

Sequence Viewer

Length: 1059 bp
ATGGGATCTGGTAATGGGGTTTATGCAGTTGGGAGTTTTGATTTGGATGCCAAGTGGCTCATCGATCCAAAGCATCTTTTTGTTGGGCCCAAAATCGGGGAGGGTGCTCATGCCAAAGTCTATGAAGGAAAATATAAGAATCAAAATGTTGCTGTGAAAATTGTCAATAGAGGAGAGACCCCAGAAGAGATTGCCAGGAGAGAAGCACGGTTTGCAAGGGAGGTGGCTATGTTGTCCAGAGTGCAGCACAAAAATTTAGTGAAGTTCATTGGTGCCTGCAAAGAACCTGTCATGGTCATAGTGACTGAGCTTCTTCTTGGGGGGACTTTGCGCAAATACTTGTTCAGTATGCGGCCAAGGTGCTTGGACATGCCTGTGGCAGTTGGGTTTGCACTTGATATTGCTCGTGCTATGGAATGCTTACACTCTCATGGAATCATTCACCGGGACCTGAAACCTGAGAACTTGATTTTGACTGCAGACCATAAAACAGTTAAACTTGCGGATTTTGGCTTAGCAAGAGAAGAGTCATTAACAGAAATGATGACTGCAGAAACTGGGACATACCGGTGGATGGCTCCTGAGCTTTATAGCACAGTTACATTAAGACATGGAGAGAAGAAGCATTACAATCATAAGGTGGATGCTTATAGCTTTGCAATTGTATTGTGGGAACTCATTCATAATAAGCTGCCCTTTGAAGGCATGTCAAATTTGCAAGCAGCATATGCAGCTGCTTTTAAGAATGTGAGGCCAAGTGCTGAAGACCTGCCAGAGGATTTGGCTTTGATAGTAACCTCATGTTGGAAAGAGGATCCAAATGATCGGCCCAACTTTAGCCAAATTATACAGATGCTTATGCATTATCTCTCTACTATTTCACCATCAAAACCCGCAATCCCCCAACGGATATTCAGATCTGATAATGCTGTACTGCCTCCTGAGTCTCCCGGTACTAGTTCTTTGATGGCTACACACAATGAATCGGGCGAAACCCCTAAAACAGACGTGGAAGAGAAGCCCAAAGGTTTTTTCTTCTGCTTTAACATGTGTTGTTGA

Protein Analysis

352

Amino Acids

39.51

Weight (kDa)

7.21

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 30 - 286 5.4e-57 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 30 - 284 2.3e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 332
Acc36I ACCTGC 1 cut(s) 777
AccB1I GGYRCC 1 cut(s) 272
AciI CCGC 3 cut(s) 352, 503, 894
AclWI GGATC 4 cut(s) 13, 59, 809, 822
AcoI YGGCCR 1 cut(s) 353
AcsI RAATTY 2 cut(s) 253, 712
AcuI CTGAAG 1 cut(s) 783
AfaI GTAC 2 cut(s) 933, 955
AfiI CCNNNNNNNGG 6 cut(s) 95, 96, 574, 701, 775, 804
AflIII ACRYGT 1 cut(s) 1047
AgeI ACCGGT 1 cut(s) 567
AgsI TTSAA 1 cut(s) 701
AhlI ACTAGT 1 cut(s) 956
AjiI CACGTC 1 cut(s) 1009
AjnI CCWGG 1 cut(s) 194
AjuI GAANNNNNNNTTGG 2 cut(s) 1016, 1048
AluBI AGCT 5 cut(s) 310, 586, 654, 691, 734
AluI AGCT 5 cut(s) 310, 586, 654, 691, 734
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 2 cut(s) 170, 951
AlwI GGATC 4 cut(s) 13, 59, 809, 822
AlwNI CAGNNNCTG 1 cut(s) 557
AoxI GGCC 4 cut(s) 86, 353, 752, 827
ApaI GGGCCC 1 cut(s) 90
ApeKI GCWGC 5 cut(s) 244, 691, 722, 731, 734
ApoI RAATTY 2 cut(s) 253, 712
ArsI GACNNNNNNTTYG 2 cut(s) 273, 305
AsiGI ACCGGT 1 cut(s) 567
Asp700I GAANNNNTTC 1 cut(s) 678
AspLEI GCGC 1 cut(s) 333
AspS9I GGNCC 4 cut(s) 86, 87, 448, 828
AsuC2I CCSGG 2 cut(s) 446, 951
AsuHPI GGTGA 2 cut(s) 434, 873
AvaII GGWCC 1 cut(s) 448
BaeGI GKGCMC 1 cut(s) 90
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 1 cut(s) 90
BarI GAAGNNNNNNTAC 2 cut(s) 611, 643
BauI CACGAG 1 cut(s) 405
BbsI GAAGAC 1 cut(s) 771
Bbv12I GWGCWC 1 cut(s) 109
BbvI GCAGC 5 cut(s) 256, 678, 721, 734, 743
BccI CCATC 3 cut(s) 568, 892, 961
BciT130I CCWGG 1 cut(s) 196
BcnI CCSGG 2 cut(s) 446, 951
BcoDI GTCTC 2 cut(s) 170, 951
BcuI ACTAGT 1 cut(s) 956
BfaI CTAG 1 cut(s) 957
BfmI CTRYAG 2 cut(s) 477, 549
BfuAI ACCTGC 1 cut(s) 777
BglII AGATCT 1 cut(s) 917
BisI GCNGC 6 cut(s) 245, 353, 692, 723, 732, 735
BlpI GCTNAGC 1 cut(s) 514
BlsI GCNGC 6 cut(s) 246, 354, 693, 724, 733, 736
Bme1390I CCNGG 3 cut(s) 196, 446, 951
Bme18I GGWCC 1 cut(s) 448
BmgBI CACGTC 1 cut(s) 1009
BmgT120I GGNCC 4 cut(s) 86, 87, 448, 828
BmiI GGNNCC 5 cut(s) 88, 274, 449, 579, 816
BmrFI CCNGG 3 cut(s) 196, 446, 951
BmrI ACTGGG 1 cut(s) 567
BmsI GCATC 4 cut(s) 37, 82, 634, 843
BmuI ACTGGG 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 771
Bpu10I CCTNAGC 1 cut(s) 582
Bpu1102I GCTNAGC 1 cut(s) 514
BpuMI CCSGG 2 cut(s) 446, 951
Bsa29I ATCGAT 1 cut(s) 63
BsaI GGTCTC 1 cut(s) 170
BsaJI CCNNGG 1 cut(s) 356
BsaWI WCCGGW 1 cut(s) 567
Bsc4I CCNNNNNNNGG 6 cut(s) 95, 96, 574, 701, 775, 804
Bse118I RCCGGY 1 cut(s) 567
Bse1I ACTGG 1 cut(s) 562
BseBI CCWGG 1 cut(s) 196
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 1 cut(s) 356
BseGI GGATG 3 cut(s) 52, 579, 649
BseLI CCNNNNNNNGG 6 cut(s) 95, 96, 574, 701, 775, 804
BseMII CTCAG 4 cut(s) 297, 450, 573, 933
BseNI ACTGG 1 cut(s) 562
BseRI GAGGAG 1 cut(s) 186
BseSI GKGCMC 1 cut(s) 90
BseXI GCAGC 5 cut(s) 256, 678, 721, 734, 743
BsgI GTGCAG 1 cut(s) 263
BshFI GGCC 4 cut(s) 88, 355, 754, 829
BshNI GGYRCC 1 cut(s) 272
BshTI ACCGGT 1 cut(s) 567
BshVI ATCGAT 1 cut(s) 63
BsiHKAI GWGCWC 1 cut(s) 109
BsiSI CCGG 3 cut(s) 445, 568, 951
BslFI GGGAC 3 cut(s) 337, 461, 574
BslI CCNNNNNNNGG 6 cut(s) 95, 96, 574, 701, 775, 804
BsmAI GTCTC 2 cut(s) 170, 951
BsmFI GGGAC 3 cut(s) 337, 461, 574
BsmI GAATGC 1 cut(s) 422
BsnI GGCC 4 cut(s) 88, 355, 754, 829
Bso31I GGTCTC 1 cut(s) 170
Bsp120I GGGCCC 1 cut(s) 86
Bsp1286I GDGCHC 2 cut(s) 90, 109
Bsp143I GATC 5 cut(s) 5, 64, 814, 823, 917
Bsp1720I GCTNAGC 1 cut(s) 514
BspACI CCGC 3 cut(s) 352, 503, 894
BspANI GGCC 4 cut(s) 88, 355, 754, 829
BspCNI CTCAG 4 cut(s) 298, 451, 574, 934
BspDI ATCGAT 1 cut(s) 63
BspLI GGNNCC 5 cut(s) 88, 274, 449, 579, 816
BspMAI CTGCAG 2 cut(s) 481, 553
BspMI ACCTGC 1 cut(s) 777
BspPI GGATC 4 cut(s) 13, 59, 809, 822
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 170
BsrFI RCCGGY 1 cut(s) 567
BsrI ACTGG 1 cut(s) 562
BssAI RCCGGY 1 cut(s) 567
BssECI CCNNGG 1 cut(s) 356
BssMI GATC 5 cut(s) 5, 64, 814, 823, 917
BssSI CACGAG 1 cut(s) 405
BssT1I CCWWGG 1 cut(s) 356
Bst2BI CACGAG 1 cut(s) 405
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 3 cut(s) 210, 493, 598
Bst6I CTCTTC 3 cut(s) 180, 519, 1008
BstAPI GCANNNNNTGC 2 cut(s) 212, 728
BstC8I GCNNGC 2 cut(s) 277, 720
BstDEI CTNAG 5 cut(s) 306, 459, 514, 582, 942
BstENI CCTNNNNNAGG 1 cut(s) 773
BstF5I GGATG 3 cut(s) 52, 579, 649
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 5 cut(s) 8, 67, 817, 826, 920
BstMAI GTCTC 2 cut(s) 170, 951
BstMBI GATC 5 cut(s) 5, 64, 814, 823, 917
BstMWI GCNNNNNNNGC 3 cut(s) 212, 728, 731
BstNI CCWGG 1 cut(s) 196
BstNSI RCATGY 3 cut(s) 373, 709, 1051
BstSCI CCNGG 3 cut(s) 194, 444, 949
BstSFI CTRYAG 2 cut(s) 477, 549
BstSLI GKGCMC 1 cut(s) 90
BstV1I GCAGC 5 cut(s) 256, 678, 721, 734, 743
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 3 cut(s) 5, 814, 917
BstYI RGATCY 3 cut(s) 5, 814, 917
Bsu15I ATCGAT 1 cut(s) 63
BsuRI GGCC 4 cut(s) 88, 355, 754, 829
BsuTUI ATCGAT 1 cut(s) 63
BtrI CACGTC 1 cut(s) 1009
BtsCI GGATG 3 cut(s) 52, 579, 649
BveI ACCTGC 1 cut(s) 777
Cac8I GCNNGC 2 cut(s) 277, 720
CaiI CAGNNNCTG 1 cut(s) 557
CfoI GCGC 1 cut(s) 333
Cfr10I RCCGGY 1 cut(s) 567
Cfr13I GGNCC 4 cut(s) 86, 87, 448, 828
ClaI ATCGAT 1 cut(s) 63
Csp6I GTAC 2 cut(s) 932, 954
CspAI ACCGGT 1 cut(s) 567
CspCI CAANNNNNGTGG 2 cut(s) 204, 239
CviAII CATG 8 cut(s) 110, 292, 370, 431, 611, 706, 801, 1048
CviQI GTAC 2 cut(s) 932, 954
DdeI CTNAG 5 cut(s) 306, 459, 514, 582, 942
DpnI GATC 5 cut(s) 7, 66, 816, 825, 919
DpnII GATC 5 cut(s) 5, 64, 814, 823, 917
EaeI YGGCCR 1 cut(s) 353
Eam1104I CTCTTC 3 cut(s) 180, 519, 1008
EarI CTCTTC 3 cut(s) 180, 519, 1008
Eco130I CCWWGG 1 cut(s) 356
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 1 cut(s) 170
Eco47I GGWCC 1 cut(s) 448
Eco57I CTGAAG 1 cut(s) 783
EcoNI CCTNNNNNAGG 1 cut(s) 773
EcoO109I RGGNCCY 1 cut(s) 448
EcoRII CCWGG 1 cut(s) 194
EcoT14I CCWWGG 1 cut(s) 356
EcoT22I ATGCAT 1 cut(s) 864
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 356
FaeI CATG 8 cut(s) 113, 295, 373, 434, 614, 709, 804, 1051
FalI AAGNNNNNCTT 2 cut(s) 680, 712
FaqI GGGAC 3 cut(s) 337, 461, 574
FatI CATG 8 cut(s) 109, 291, 369, 430, 610, 705, 800, 1047
FauI CCCGC 1 cut(s) 901
FauNDI CATATG 1 cut(s) 727
Fnu4HI GCNGC 6 cut(s) 245, 353, 692, 723, 732, 735
FokI GGATG 3 cut(s) 59, 586, 656
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 6 cut(s) 245, 353, 692, 723, 732, 735
FspBI CTAG 1 cut(s) 957
FspI TGCGCA 1 cut(s) 332
GlaI GCGC 1 cut(s) 332
GluI GCNGC 6 cut(s) 245, 353, 692, 723, 732, 735
HaeIII GGCC 4 cut(s) 88, 355, 754, 829
HapII CCGG 3 cut(s) 445, 568, 951
HhaI GCGC 1 cut(s) 333
Hin1II CATG 8 cut(s) 113, 295, 373, 434, 614, 709, 804, 1051
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
HinfI GANTC 5 cut(s) 139, 435, 527, 944, 983
HpaII CCGG 3 cut(s) 445, 568, 951
HphI GGTGA 2 cut(s) 434, 873
Hpy188I TCNGA 2 cut(s) 917, 922
Hpy188III TCNNGA 3 cut(s) 237, 581, 941
HpyAV CCTTC 2 cut(s) 119, 695
HpyCH4III ACNGT 3 cut(s) 210, 493, 598
HpyCH4IV ACGT 1 cut(s) 1008
HpyF10VI GCNNNNNNNGC 3 cut(s) 212, 728, 731
HpyF3I CTNAG 5 cut(s) 306, 459, 514, 582, 942
HpySE526I ACGT 1 cut(s) 1008
Hsp92II CATG 8 cut(s) 113, 295, 373, 434, 614, 709, 804, 1051
HspAI GCGC 1 cut(s) 331
Kzo9I GATC 5 cut(s) 5, 64, 814, 823, 917
LmnI GCTCC 1 cut(s) 583
Lsp1109I GCAGC 5 cut(s) 256, 678, 721, 734, 743
LweI GCATC 4 cut(s) 37, 82, 634, 843
MaeI CTAG 1 cut(s) 957
MaeII ACGT 1 cut(s) 1008
MaeIII GTNAC 3 cut(s) 301, 598, 793
MalI GATC 5 cut(s) 7, 66, 816, 825, 919
MboI GATC 5 cut(s) 5, 64, 814, 823, 917
MboII GAAGA 7 cut(s) 197, 305, 536, 631, 776, 1025, 1027
MfeI CAATTG 1 cut(s) 660
MflI RGATCY 3 cut(s) 5, 814, 917
MhlI GDGCHC 2 cut(s) 90, 109
MluCI AATT 5 cut(s) 159, 253, 660, 712, 843
MlyI GAGTC 2 cut(s) 536, 953
MmeI TCCRAC 1 cut(s) 785
MnlI CCTC 8 cut(s) 94, 164, 214, 744, 769, 805, 808, 948
Mph1103I ATGCAT 1 cut(s) 864
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 5 cut(s) 495, 533, 605, 741, 1044
MslI CAYNNNNRTG 3 cut(s) 374, 429, 568
MspA1I CMGCKG 1 cut(s) 734
MspI CCGG 3 cut(s) 445, 568, 951
MspR9I CCNGG 3 cut(s) 196, 446, 951
MunI CAATTG 1 cut(s) 660
Mva1269I GAATGC 1 cut(s) 422
MvaI CCWGG 1 cut(s) 196
MwoI GCNNNNNNNGC 3 cut(s) 212, 728, 731
NciI CCSGG 2 cut(s) 446, 951
NdeI CATATG 1 cut(s) 727
NdeII GATC 5 cut(s) 5, 64, 814, 823, 917
NlaIII CATG 8 cut(s) 113, 295, 373, 434, 614, 709, 804, 1051
NlaIV GGNNCC 5 cut(s) 88, 274, 449, 579, 816
NmuCI GTSAC 1 cut(s) 301
NsbI TGCGCA 1 cut(s) 332
NsiI ATGCAT 1 cut(s) 864
NspI RCATGY 3 cut(s) 373, 709, 1051
PciI ACATGT 1 cut(s) 1047
PctI GAATGC 1 cut(s) 422
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 3 cut(s) 139, 435, 983
PinAI ACCGGT 1 cut(s) 567
PkrI GCNGC 6 cut(s) 246, 354, 693, 724, 733, 736
PleI GAGTC 2 cut(s) 535, 952
PpsI GAGTC 2 cut(s) 535, 952
PpuMI RGGWCCY 1 cut(s) 448
PscI ACATGT 1 cut(s) 1047
Psp5II RGGWCCY 1 cut(s) 448
Psp6I CCWGG 1 cut(s) 194
PspGI CCWGG 1 cut(s) 194
PspN4I GGNNCC 5 cut(s) 88, 274, 449, 579, 816
PspOMI GGGCCC 1 cut(s) 86
PspPI GGNCC 4 cut(s) 86, 87, 448, 828
PspPPI RGGWCCY 1 cut(s) 448
PstI CTGCAG 2 cut(s) 481, 553
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 3 cut(s) 5, 814, 917
PvuII CAGCTG 1 cut(s) 734
RsaI GTAC 2 cut(s) 933, 955
RsaNI GTAC 2 cut(s) 932, 954
RseI CAYNNNNRTG 3 cut(s) 374, 429, 568
SaqAI TTAA 5 cut(s) 495, 533, 605, 741, 1044
SatI GCNGC 6 cut(s) 245, 353, 692, 723, 732, 735
Sau3AI GATC 5 cut(s) 5, 64, 814, 823, 917
Sau96I GGNCC 4 cut(s) 86, 87, 448, 828
SchI GAGTC 2 cut(s) 536, 953
ScrFI CCNGG 3 cut(s) 196, 446, 951
SduI GDGCHC 2 cut(s) 90, 109
SfaNI GCATC 4 cut(s) 37, 82, 634, 843
SfcI CTRYAG 2 cut(s) 477, 549
SinI GGWCC 1 cut(s) 448
SmiMI CAYNNNNRTG 3 cut(s) 374, 429, 568
SpeI ACTAGT 1 cut(s) 956
Sse9I AATT 5 cut(s) 159, 253, 660, 712, 843
SsiI CCGC 3 cut(s) 352, 503, 894
SspMI CTAG 1 cut(s) 957
StyD4I CCNGG 3 cut(s) 194, 444, 949
StyI CCWWGG 1 cut(s) 356
TaaI ACNGT 3 cut(s) 210, 493, 598
TaiI ACGT 1 cut(s) 1011
TaqI TCGA 1 cut(s) 63
TasI AATT 5 cut(s) 159, 253, 660, 712, 843
TatI WGTACW 1 cut(s) 931
TauI GCSGC 1 cut(s) 355
TfiI GAWTC 3 cut(s) 139, 435, 983
Tru1I TTAA 5 cut(s) 495, 533, 605, 741, 1044
Tru9I TTAA 5 cut(s) 495, 533, 605, 741, 1044
TseFI GTSAC 1 cut(s) 301
TseI GCWGC 5 cut(s) 244, 691, 722, 731, 734
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 4 cut(s) 138, 256, 671, 996
TspGWI ACGGA 1 cut(s) 922
VpaK11BI GGWCC 1 cut(s) 448
XagI CCTNNNNNAGG 1 cut(s) 773
XapI RAATTY 2 cut(s) 253, 712
XceI RCATGY 3 cut(s) 373, 709, 1051
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 1 cut(s) 957
Zsp2I ATGCAT 1 cut(s) 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.