SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD H box
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1111500.v1.1 MD13G1012800.v1.1 MD14G1086800.v1.1 |
| pyrus_communis | pycom16g23680 |
| rosa_chinensis | RchiOBHm_Chr1g0327391 RchiOBHm_Chr2g0095571 RchiOBHm_Chr2g0161621 RchiOBHm_Chr2g0171851 RchiOBHm_Chr3g0494951 RchiOBHm_Chr4g0407971 |
| rosa_multiflora | Rmu_co8049090.1_g000001 Rmu_sc0003610.1_g000015 |
| rosa_roxburghii | Rroxscaffold_1G00001900 Rroxscaffold_1G00039140 Rroxscaffold_6G00388120 |
| rosa_rugosa | Rorug02G0632300 |
| rosa_samantha | Rh3AG069600 Rh3AG317900 Rh3BG072000 Rh3DG252300 Rh4AG109100 Rh4AG110900 Rh4CG284900 Rh6AG114600 Rh7AG464100 |
| rosa_wichuraiana | Rw5G002470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 206 |
| AatII | GACGTC | 1 cut(s) | 70 |
| AccI | GTMKAC | 1 cut(s) | 399 |
| AciI | CCGC | 2 cut(s) | 296, 410 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AcuI | CTGAAG | 1 cut(s) | 53 |
| AcyI | GRCGYC | 1 cut(s) | 67 |
| AfaI | GTAC | 3 cut(s) | 128, 136, 382 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 346, 363 |
| AgsI | TTSAA | 2 cut(s) | 247, 292 |
| AluBI | AGCT | 3 cut(s) | 37, 41, 260 |
| AluI | AGCT | 3 cut(s) | 37, 41, 260 |
| AoxI | GGCC | 1 cut(s) | 337 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 21 |
| AsuNHI | GCTAGC | 1 cut(s) | 37 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 118, 151, 255, 288 |
| BccI | CCATC | 1 cut(s) | 113 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 287, 321 |
| BfaI | CTAG | 2 cut(s) | 38, 368 |
| BmsI | GCATC | 2 cut(s) | 55, 342 |
| BmtI | GCTAGC | 1 cut(s) | 41 |
| BsaHI | GRCGYC | 1 cut(s) | 67 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 346, 363 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| Bse3DI | GCAATG | 1 cut(s) | 328 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 346, 363 |
| BseMI | GCAATG | 1 cut(s) | 328 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BshFI | GGCC | 1 cut(s) | 339 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 346, 363 |
| BsnI | GGCC | 1 cut(s) | 339 |
| Bsp143I | GATC | 2 cut(s) | 304, 319 |
| BspACI | CCGC | 2 cut(s) | 296, 410 |
| BspANI | GGCC | 1 cut(s) | 339 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BspHI | TCATGA | 1 cut(s) | 277 |
| BspOI | GCTAGC | 1 cut(s) | 41 |
| BsrDI | GCAATG | 1 cut(s) | 328 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssMI | GATC | 2 cut(s) | 304, 319 |
| BssNI | GRCGYC | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 1 cut(s) | 268 |
| BstACI | GRCGYC | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 216 |
| BstDEI | CTNAG | 2 cut(s) | 219, 375 |
| BstKTI | GATC | 2 cut(s) | 307, 322 |
| BstMBI | GATC | 2 cut(s) | 304, 319 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 43 |
| BsuRI | GGCC | 1 cut(s) | 339 |
| BtsIMutI | CAGTG | 1 cut(s) | 29 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 216 |
| CciI | TCATGA | 1 cut(s) | 277 |
| Csp6I | GTAC | 3 cut(s) | 127, 135, 381 |
| CviAII | CATG | 3 cut(s) | 182, 189, 278 |
| CviJI | RGCY | 8 cut(s) | 14, 37, 41, 59, 214, 260, 339, 367 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 37, 41, 59, 214, 260, 339, 367 |
| CviQI | GTAC | 3 cut(s) | 127, 135, 381 |
| DdeI | CTNAG | 2 cut(s) | 219, 375 |
| DpnI | GATC | 2 cut(s) | 306, 321 |
| DpnII | GATC | 2 cut(s) | 304, 319 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Eco57I | CTGAAG | 1 cut(s) | 53 |
| FaeI | CATG | 3 cut(s) | 185, 192, 281 |
| FatI | CATG | 3 cut(s) | 181, 188, 277 |
| FauI | CCCGC | 1 cut(s) | 303 |
| FblI | GTMKAC | 1 cut(s) | 399 |
| FspBI | CTAG | 2 cut(s) | 38, 368 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| HaeIII | GGCC | 1 cut(s) | 339 |
| Hin1I | GRCGYC | 1 cut(s) | 67 |
| Hin1II | CATG | 3 cut(s) | 185, 192, 281 |
| Hpy166II | GTNNAC | 3 cut(s) | 92, 135, 400 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| Hpy8I | GTNNAC | 3 cut(s) | 92, 135, 400 |
| HpyAV | CCTTC | 3 cut(s) | 36, 117, 340 |
| HpyCH4III | ACNGT | 1 cut(s) | 268 |
| HpyCH4IV | ACGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 1 cut(s) | 333 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 43 |
| HpyF3I | CTNAG | 2 cut(s) | 219, 375 |
| HpySE526I | ACGT | 1 cut(s) | 67 |
| Hsp92I | GRCGYC | 1 cut(s) | 67 |
| Hsp92II | CATG | 3 cut(s) | 185, 192, 281 |
| Kzo9I | GATC | 2 cut(s) | 304, 319 |
| LmnI | GCTCC | 1 cut(s) | 257 |
| LpnPI | CCDG | 5 cut(s) | 27, 115, 196, 296, 349 |
| LweI | GCATC | 2 cut(s) | 55, 342 |
| MaeI | CTAG | 2 cut(s) | 38, 368 |
| MaeII | ACGT | 1 cut(s) | 67 |
| MaeIII | GTNAC | 3 cut(s) | 100, 352, 370 |
| MalI | GATC | 2 cut(s) | 306, 321 |
| MboI | GATC | 2 cut(s) | 304, 319 |
| MboII | GAAGA | 2 cut(s) | 14, 329 |
| MfeI | CAATTG | 1 cut(s) | 384 |
| MluCI | AATT | 2 cut(s) | 300, 384 |
| MmeI | TCCRAC | 1 cut(s) | 235 |
| MroXI | GAANNNNTTC | 1 cut(s) | 21 |
| MunI | CAATTG | 1 cut(s) | 384 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 43 |
| NdeII | GATC | 2 cut(s) | 304, 319 |
| NheI | GCTAGC | 1 cut(s) | 37 |
| NlaIII | CATG | 3 cut(s) | 185, 192, 281 |
| NmuCI | GTSAC | 1 cut(s) | 370 |
| PagI | TCATGA | 1 cut(s) | 277 |
| PdmI | GAANNNNTTC | 1 cut(s) | 21 |
| PsiI | TTATAA | 1 cut(s) | 206 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| RsaI | GTAC | 3 cut(s) | 128, 136, 382 |
| RsaNI | GTAC | 3 cut(s) | 127, 135, 381 |
| Sau3AI | GATC | 2 cut(s) | 304, 319 |
| SetI | ASST | 6 cut(s) | 39, 43, 70, 128, 262, 351 |
| SfaNI | GCATC | 2 cut(s) | 55, 342 |
| Sse9I | AATT | 2 cut(s) | 300, 384 |
| SsiI | CCGC | 2 cut(s) | 296, 410 |
| SspMI | CTAG | 2 cut(s) | 38, 368 |
| TaaI | ACNGT | 1 cut(s) | 268 |
| TaiI | ACGT | 1 cut(s) | 70 |
| TaqI | TCGA | 1 cut(s) | 307 |
| TasI | AATT | 2 cut(s) | 300, 384 |
| TatI | WGTACW | 1 cut(s) | 134 |
| TscAI | CASTG | 1 cut(s) | 36 |
| TseFI | GTSAC | 1 cut(s) | 370 |
| Tsp45I | GTSAC | 1 cut(s) | 370 |
| TspDTI | ATGAA | 2 cut(s) | 266, 405 |
| TspGWI | ACGGA | 1 cut(s) | 167 |
| TspRI | CASTG | 1 cut(s) | 36 |
| XmiI | GTMKAC | 1 cut(s) | 399 |
| XmnI | GAANNNNTTC | 1 cut(s) | 21 |
| XspI | CTAG | 2 cut(s) | 38, 368 |
| ZraI | GACGTC | 1 cut(s) | 68 |