WLM domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35690 |
| fragaria_vesca | FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 |
| malus_domestica | MD09G1117000.v1.1 MD17G1108500.v1.1 |
| prunus_persica | Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1 |
| pyrus_communis | pycom09g04190 pycom09g04200 pycom17g10100 |
| rosa_chinensis | RchiOBHm_Chr2g0157621 |
| rosa_laevigata | RLG00000021001 RLG00000021004 |
| rosa_multiflora | Rmu_co8368661.1_g000001 Rmu_sc0000195.1_g000050 Rmu_sc0005255.1_g000015 Rmu_sc0006475.1_g000002 Rmu_sc0015282.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092080 |
| rosa_rugosa | Rorug02G0462400 |
| rosa_samantha | Rh2AG526500 Rh2BG541400 Rh2CG511200 Rh2DG549900 |
| rosa_wichuraiana | Rw2G043610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1412 |
| Acc65I | GGTACC | 1 cut(s) | 864 |
| AccB1I | GGYRCC | 1 cut(s) | 864 |
| AccIII | TCCGGA | 1 cut(s) | 453 |
| AciI | CCGC | 6 cut(s) | 185, 391, 425, 862, 1206, 1262 |
| AcsI | RAATTY | 4 cut(s) | 449, 1613, 1623, 1841 |
| AcuI | CTGAAG | 4 cut(s) | 954, 1044, 1070, 1934 |
| AdeI | CACNNNGTG | 1 cut(s) | 854 |
| AfaI | GTAC | 1 cut(s) | 866 |
| AfeI | AGCGCT | 1 cut(s) | 958 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 658, 1102 |
| AflII | CTTAAG | 1 cut(s) | 346 |
| AjnI | CCWGG | 3 cut(s) | 469, 535, 1759 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 946, 978 |
| AleI | CACNNNNGTG | 1 cut(s) | 1761 |
| AluBI | AGCT | 8 cut(s) | 204, 260, 356, 812, 925, 968, 1685, 1832 |
| AluI | AGCT | 8 cut(s) | 204, 260, 356, 812, 925, 968, 1685, 1832 |
| Alw21I | GWGCWC | 1 cut(s) | 54 |
| Alw26I | GTCTC | 7 cut(s) | 222, 373, 894, 1024, 1278, 1892, 1955 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 415, 536, 1292, 1535 |
| Ama87I | CYCGRG | 1 cut(s) | 125 |
| Aor13HI | TCCGGA | 1 cut(s) | 453 |
| Aor51HI | AGCGCT | 1 cut(s) | 958 |
| AoxI | GGCC | 2 cut(s) | 404, 594 |
| ApeKI | GCWGC | 6 cut(s) | 388, 527, 949, 980, 1678, 1832 |
| ApoI | RAATTY | 4 cut(s) | 449, 1613, 1623, 1841 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 200, 232 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 544, 910, 1845 |
| Asp718I | GGTACC | 1 cut(s) | 864 |
| AspLEI | GCGC | 1 cut(s) | 959 |
| AspS9I | GGNCC | 3 cut(s) | 431, 595, 1209 |
| AsuC2I | CCSGG | 3 cut(s) | 869, 1057, 1929 |
| AsuHPI | GGTGA | 2 cut(s) | 980, 1775 |
| AsuII | TTCGAA | 1 cut(s) | 679 |
| AvaI | CYCGRG | 1 cut(s) | 125 |
| AvaII | GGWCC | 2 cut(s) | 431, 1209 |
| BanI | GGYRCC | 1 cut(s) | 864 |
| BanII | GRGCYC | 1 cut(s) | 1152 |
| BauI | CACGAG | 1 cut(s) | 1275 |
| BbsI | GAAGAC | 3 cut(s) | 668, 891, 1467 |
| Bbv12I | GWGCWC | 1 cut(s) | 54 |
| BbvCI | CCTCAGC | 1 cut(s) | 1686 |
| BbvI | GCAGC | 6 cut(s) | 400, 514, 936, 967, 1665, 1819 |
| BccI | CCATC | 5 cut(s) | 224, 272, 286, 290, 1457 |
| BciT130I | CCWGG | 3 cut(s) | 471, 537, 1761 |
| BciVI | GTATCC | 1 cut(s) | 1561 |
| BclI | TGATCA | 1 cut(s) | 1606 |
| BcnI | CCSGG | 3 cut(s) | 869, 1057, 1929 |
| BcoDI | GTCTC | 7 cut(s) | 222, 373, 894, 1024, 1278, 1892, 1955 |
| BfmI | CTRYAG | 1 cut(s) | 528 |
| BfoI | RGCGCY | 1 cut(s) | 960 |
| BfrI | CTTAAG | 1 cut(s) | 346 |
| BfuI | GTATCC | 1 cut(s) | 1561 |
| BisI | GCNGC | 6 cut(s) | 389, 528, 950, 981, 1679, 1833 |
| BlsI | GCNGC | 6 cut(s) | 390, 529, 951, 982, 1680, 1834 |
| Bme1390I | CCNGG | 6 cut(s) | 471, 537, 869, 1057, 1761, 1929 |
| Bme18I | GGWCC | 2 cut(s) | 431, 1209 |
| BmeT110I | CYCGRG | 1 cut(s) | 125 |
| BmgT120I | GGNCC | 3 cut(s) | 431, 595, 1209 |
| BmiI | GGNNCC | 4 cut(s) | 597, 866, 1107, 1210 |
| BmrFI | CCNGG | 6 cut(s) | 471, 537, 869, 1057, 1761, 1929 |
| BmrI | ACTGGG | 2 cut(s) | 1117, 1146 |
| BmsI | GCATC | 9 cut(s) | 244, 571, 639, 760, 1108, 1357, 1534, 1567, 1665 |
| BmuI | ACTGGG | 2 cut(s) | 1117, 1146 |
| BpiI | GAAGAC | 3 cut(s) | 668, 891, 1467 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1686 |
| Bpu14I | TTCGAA | 1 cut(s) | 679 |
| BpuEI | CTTGAG | 2 cut(s) | 265, 677 |
| BpuMI | CCSGG | 3 cut(s) | 869, 1057, 1929 |
| BsaBI | GATNNNNATC | 2 cut(s) | 234, 1536 |
| BsaJI | CCNNGG | 5 cut(s) | 634, 652, 1469, 1759, 1836 |
| BsaWI | WCCGGW | 1 cut(s) | 453 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 658, 1102 |
| Bse1I | ACTGG | 2 cut(s) | 1123, 1152 |
| Bse8I | GATNNNNATC | 2 cut(s) | 234, 1536 |
| BseAI | TCCGGA | 1 cut(s) | 453 |
| BseBI | CCWGG | 3 cut(s) | 471, 537, 1761 |
| BseDI | CCNNGG | 5 cut(s) | 634, 652, 1469, 1759, 1836 |
| BseGI | GGATG | 9 cut(s) | 157, 399, 630, 1042, 1184, 1372, 1558, 1571, 1885 |
| BseJI | GATNNNNATC | 2 cut(s) | 234, 1536 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 658, 1102 |
| BseNI | ACTGG | 2 cut(s) | 1123, 1152 |
| BseRI | GAGGAG | 1 cut(s) | 674 |
| BseXI | GCAGC | 6 cut(s) | 400, 514, 936, 967, 1665, 1819 |
| BshFI | GGCC | 2 cut(s) | 406, 596 |
| BshNI | GGYRCC | 1 cut(s) | 864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 54 |
| BsiHKCI | CYCGRG | 1 cut(s) | 125 |
| BsiSI | CCGG | 5 cut(s) | 454, 491, 869, 1056, 1928 |
| BslFI | GGGAC | 3 cut(s) | 606, 1222, 1279 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 658, 1102 |
| BsmAI | GTCTC | 7 cut(s) | 222, 373, 894, 1024, 1278, 1892, 1955 |
| BsmFI | GGGAC | 3 cut(s) | 606, 1222, 1279 |
| BsmI | GAATGC | 2 cut(s) | 519, 1584 |
| BsnI | GGCC | 2 cut(s) | 406, 596 |
| BsoBI | CYCGRG | 1 cut(s) | 125 |
| Bsp119I | TTCGAA | 1 cut(s) | 679 |
| Bsp1286I | GDGCHC | 2 cut(s) | 54, 1152 |
| Bsp13I | TCCGGA | 1 cut(s) | 453 |
| Bsp19I | CCATGG | 2 cut(s) | 652, 1836 |
| BspACI | CCGC | 6 cut(s) | 185, 391, 425, 862, 1206, 1262 |
| BspANI | GGCC | 2 cut(s) | 406, 596 |
| BspEI | TCCGGA | 1 cut(s) | 453 |
| BspHI | TCATGA | 3 cut(s) | 552, 582, 1009 |
| BspLI | GGNNCC | 4 cut(s) | 597, 866, 1107, 1210 |
| BspMAI | CTGCAG | 1 cut(s) | 532 |
| BspT104I | TTCGAA | 1 cut(s) | 679 |
| BspT107I | GGYRCC | 1 cut(s) | 864 |
| BspTI | CTTAAG | 1 cut(s) | 346 |
| BsrI | ACTGG | 2 cut(s) | 1123, 1152 |
| BssECI | CCNNGG | 5 cut(s) | 634, 652, 1469, 1759, 1836 |
| BssSI | CACGAG | 1 cut(s) | 1275 |
| BssT1I | CCWWGG | 3 cut(s) | 652, 1469, 1836 |
| Bst2BI | CACGAG | 1 cut(s) | 1275 |
| Bst2UI | CCWGG | 3 cut(s) | 471, 537, 1761 |
| Bst4CI | ACNGT | 6 cut(s) | 115, 798, 876, 992, 1003, 1714 |
| Bst6I | CTCTTC | 2 cut(s) | 363, 735 |
| BstAFI | CTTAAG | 1 cut(s) | 346 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 136 |
| BstBI | TTCGAA | 1 cut(s) | 679 |
| BstC8I | GCNNGC | 5 cut(s) | 404, 525, 1658, 1683, 1944 |
| BstDSI | CCRYGG | 2 cut(s) | 652, 1836 |
| BstF5I | GGATG | 9 cut(s) | 157, 399, 630, 1042, 1184, 1372, 1558, 1571, 1885 |
| BstH2I | RGCGCY | 1 cut(s) | 960 |
| BstHHI | GCGC | 1 cut(s) | 959 |
| BstMAI | GTCTC | 7 cut(s) | 222, 373, 894, 1024, 1278, 1892, 1955 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 136, 500, 568, 636, 965 |
| BstNI | CCWGG | 3 cut(s) | 471, 537, 1761 |
| BstNSI | RCATGY | 1 cut(s) | 523 |
| BstSCI | CCNGG | 6 cut(s) | 469, 535, 867, 1055, 1759, 1927 |
| BstSFI | CTRYAG | 1 cut(s) | 528 |
| BstV1I | GCAGC | 6 cut(s) | 400, 514, 936, 967, 1665, 1819 |
| BstV2I | GAAGAC | 3 cut(s) | 668, 891, 1467 |
| BstX2I | RGATCY | 5 cut(s) | 37, 121, 532, 1288, 1531 |
| BstYI | RGATCY | 5 cut(s) | 37, 121, 532, 1288, 1531 |
| BsuI | GTATCC | 1 cut(s) | 1561 |
| BsuRI | GGCC | 2 cut(s) | 406, 596 |
| BtgI | CCRYGG | 2 cut(s) | 652, 1836 |
| BtsCI | GGATG | 9 cut(s) | 157, 399, 630, 1042, 1184, 1372, 1558, 1571, 1885 |
| BtsIMutI | CAGTG | 3 cut(s) | 848, 978, 1237 |
| Cac8I | GCNNGC | 5 cut(s) | 404, 525, 1658, 1683, 1944 |
| CaiI | CAGNNNCTG | 4 cut(s) | 415, 536, 1292, 1535 |
| CciI | TCATGA | 3 cut(s) | 552, 582, 1009 |
| CfoI | GCGC | 1 cut(s) | 959 |
| Cfr13I | GGNCC | 3 cut(s) | 431, 595, 1209 |
| CseI | GACGC | 2 cut(s) | 662, 1861 |
| Csp6I | GTAC | 1 cut(s) | 865 |
| CviQI | GTAC | 1 cut(s) | 865 |
| DraIII | CACNNNGTG | 1 cut(s) | 854 |
| Eam1104I | CTCTTC | 2 cut(s) | 363, 735 |
| EarI | CTCTTC | 2 cut(s) | 363, 735 |
| Eco130I | CCWWGG | 3 cut(s) | 652, 1469, 1836 |
| Eco147I | AGGCCT | 1 cut(s) | 406 |
| Eco24I | GRGCYC | 1 cut(s) | 1152 |
| Eco32I | GATATC | 1 cut(s) | 666 |
| Eco47I | GGWCC | 2 cut(s) | 431, 1209 |
| Eco47III | AGCGCT | 1 cut(s) | 958 |
| Eco57I | CTGAAG | 4 cut(s) | 954, 1044, 1070, 1934 |
| Eco88I | CYCGRG | 1 cut(s) | 125 |
| EcoO109I | RGGNCCY | 2 cut(s) | 431, 1209 |
| EcoRI | GAATTC | 3 cut(s) | 449, 1623, 1841 |
| EcoRII | CCWGG | 3 cut(s) | 469, 535, 1759 |
| EcoRV | GATATC | 1 cut(s) | 666 |
| EcoT14I | CCWWGG | 3 cut(s) | 652, 1469, 1836 |
| EcoT22I | ATGCAT | 1 cut(s) | 632 |
| EcoT38I | GRGCYC | 1 cut(s) | 1152 |
| ErhI | CCWWGG | 3 cut(s) | 652, 1469, 1836 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 329, 361, 898, 930, 1462, 1494 |
| FaqI | GGGAC | 3 cut(s) | 606, 1222, 1279 |
| FauI | CCCGC | 2 cut(s) | 1199, 1255 |
| FauNDI | CATATG | 2 cut(s) | 68, 1399 |
| FbaI | TGATCA | 1 cut(s) | 1606 |
| Fnu4HI | GCNGC | 6 cut(s) | 389, 528, 950, 981, 1679, 1833 |
| FokI | GGATG | 9 cut(s) | 164, 406, 617, 1029, 1171, 1379, 1545, 1558, 1892 |
| FriOI | GRGCYC | 1 cut(s) | 1152 |
| Fsp4HI | GCNGC | 6 cut(s) | 389, 528, 950, 981, 1679, 1833 |
| GlaI | GCGC | 1 cut(s) | 958 |
| GluI | GCNGC | 6 cut(s) | 389, 528, 950, 981, 1679, 1833 |
| HaeII | RGCGCY | 1 cut(s) | 960 |
| HaeIII | GGCC | 2 cut(s) | 406, 596 |
| HapII | CCGG | 5 cut(s) | 454, 491, 869, 1056, 1928 |
| HgaI | GACGC | 2 cut(s) | 662, 1861 |
| HhaI | GCGC | 1 cut(s) | 959 |
| Hin6I | GCGC | 1 cut(s) | 957 |
| HinP1I | GCGC | 1 cut(s) | 957 |
| HincII | GTYRAC | 2 cut(s) | 147, 1250 |
| HindII | GTYRAC | 2 cut(s) | 147, 1250 |
| HindIII | AAGCTT | 2 cut(s) | 258, 923 |
| HpaI | GTTAAC | 1 cut(s) | 147 |
| HpaII | CCGG | 5 cut(s) | 454, 491, 869, 1056, 1928 |
| HphI | GGTGA | 2 cut(s) | 980, 1775 |
| Hpy166II | GTNNAC | 6 cut(s) | 147, 251, 1250, 1342, 1652, 1953 |
| Hpy8I | GTNNAC | 6 cut(s) | 147, 251, 1250, 1342, 1652, 1953 |
| Hpy99I | CGWCG | 1 cut(s) | 1877 |
| HpyAV | CCTTC | 3 cut(s) | 232, 1468, 1856 |
| HpyCH4III | ACNGT | 6 cut(s) | 115, 798, 876, 992, 1003, 1714 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 136, 500, 568, 636, 965 |
| HspAI | GCGC | 1 cut(s) | 957 |
| Kpn2I | TCCGGA | 1 cut(s) | 453 |
| KpnI | GGTACC | 1 cut(s) | 868 |
| Ksp22I | TGATCA | 1 cut(s) | 1606 |
| KspAI | GTTAAC | 1 cut(s) | 147 |
| LmnI | GCTCC | 2 cut(s) | 49, 1105 |
| Lsp1109I | GCAGC | 6 cut(s) | 400, 514, 936, 967, 1665, 1819 |
| LweI | GCATC | 9 cut(s) | 244, 571, 639, 760, 1108, 1357, 1534, 1567, 1665 |
| MaeIII | GTNAC | 4 cut(s) | 842, 1438, 1519, 1636 |
| MflI | RGATCY | 5 cut(s) | 37, 121, 532, 1288, 1531 |
| MhlI | GDGCHC | 2 cut(s) | 54, 1152 |
| MlyI | GAGTC | 3 cut(s) | 421, 1244, 1280 |
| MmeI | TCCRAC | 2 cut(s) | 877, 1867 |
| Mph1103I | ATGCAT | 1 cut(s) | 632 |
| MroI | TCCGGA | 1 cut(s) | 453 |
| MroXI | GAANNNNTTC | 3 cut(s) | 544, 910, 1845 |
| MseI | TTAA | 7 cut(s) | 87, 146, 156, 347, 1671, 1692, 1731 |
| MslI | CAYNNNNRTG | 6 cut(s) | 287, 1014, 1047, 1512, 1673, 1761 |
| MspA1I | CMGCKG | 1 cut(s) | 391 |
| MspCI | CTTAAG | 1 cut(s) | 346 |
| MspI | CCGG | 5 cut(s) | 454, 491, 869, 1056, 1928 |
| MspR9I | CCNGG | 6 cut(s) | 471, 537, 869, 1057, 1761, 1929 |
| Mva1269I | GAATGC | 2 cut(s) | 519, 1584 |
| MvaI | CCWGG | 3 cut(s) | 471, 537, 1761 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 136, 500, 568, 636, 965 |
| NciI | CCSGG | 3 cut(s) | 869, 1057, 1929 |
| NcoI | CCATGG | 2 cut(s) | 652, 1836 |
| NdeI | CATATG | 2 cut(s) | 68, 1399 |
| NlaIV | GGNNCC | 4 cut(s) | 597, 866, 1107, 1210 |
| NmeAIII | GCCGAG | 1 cut(s) | 615 |
| NmuCI | GTSAC | 2 cut(s) | 842, 1519 |
| NsiI | ATGCAT | 1 cut(s) | 632 |
| NspI | RCATGY | 1 cut(s) | 523 |
| NspV | TTCGAA | 1 cut(s) | 679 |
| OliI | CACNNNNGTG | 1 cut(s) | 1761 |
| PagI | TCATGA | 3 cut(s) | 552, 582, 1009 |
| PceI | AGGCCT | 1 cut(s) | 406 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1872 |
| PctI | GAATGC | 2 cut(s) | 519, 1584 |
| PdmI | GAANNNNTTC | 3 cut(s) | 544, 910, 1845 |
| PfeI | GAWTC | 7 cut(s) | 579, 1037, 1052, 1076, 1163, 1181, 1502 |
| PflFI | GACNNNGTC | 1 cut(s) | 1270 |
| PfoI | TCCNGGA | 2 cut(s) | 469, 535 |
| PkrI | GCNGC | 6 cut(s) | 390, 529, 951, 982, 1680, 1834 |
| PleI | GAGTC | 3 cut(s) | 420, 1243, 1279 |
| PpsI | GAGTC | 3 cut(s) | 420, 1243, 1279 |
| PpuMI | RGGWCCY | 2 cut(s) | 431, 1209 |
| PsiI | TTATAA | 1 cut(s) | 1412 |
| Psp5II | RGGWCCY | 2 cut(s) | 431, 1209 |
| Psp6I | CCWGG | 3 cut(s) | 469, 535, 1759 |
| PspGI | CCWGG | 3 cut(s) | 469, 535, 1759 |
| PspN4I | GGNNCC | 4 cut(s) | 597, 866, 1107, 1210 |
| PspPI | GGNCC | 3 cut(s) | 431, 595, 1209 |
| PspPPI | RGGWCCY | 2 cut(s) | 431, 1209 |
| PstI | CTGCAG | 1 cut(s) | 532 |
| PstNI | CAGNNNCTG | 4 cut(s) | 415, 536, 1292, 1535 |
| PsuI | RGATCY | 5 cut(s) | 37, 121, 532, 1288, 1531 |
| PsyI | GACNNNGTC | 1 cut(s) | 1270 |
| RsaI | GTAC | 1 cut(s) | 866 |
| RsaNI | GTAC | 1 cut(s) | 865 |
| RseI | CAYNNNNRTG | 6 cut(s) | 287, 1014, 1047, 1512, 1673, 1761 |
| SaqAI | TTAA | 7 cut(s) | 87, 146, 156, 347, 1671, 1692, 1731 |
| SatI | GCNGC | 6 cut(s) | 389, 528, 950, 981, 1679, 1833 |
| Sau96I | GGNCC | 3 cut(s) | 431, 595, 1209 |
| SchI | GAGTC | 3 cut(s) | 421, 1244, 1280 |
| ScrFI | CCNGG | 6 cut(s) | 471, 537, 869, 1057, 1761, 1929 |
| SduI | GDGCHC | 2 cut(s) | 54, 1152 |
| SfaNI | GCATC | 9 cut(s) | 244, 571, 639, 760, 1108, 1357, 1534, 1567, 1665 |
| SfcI | CTRYAG | 1 cut(s) | 528 |
| SfuI | TTCGAA | 1 cut(s) | 679 |
| SinI | GGWCC | 2 cut(s) | 431, 1209 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 287, 1014, 1047, 1512, 1673, 1761 |
| SmlI | CTYRAG | 4 cut(s) | 244, 346, 692, 1958 |
| SmoI | CTYRAG | 4 cut(s) | 244, 346, 692, 1958 |
| SseBI | AGGCCT | 1 cut(s) | 406 |
| SsiI | CCGC | 6 cut(s) | 185, 391, 425, 862, 1206, 1262 |
| SspI | AATATT | 2 cut(s) | 58, 1408 |
| StuI | AGGCCT | 1 cut(s) | 406 |
| StyD4I | CCNGG | 6 cut(s) | 469, 535, 867, 1055, 1759, 1927 |
| StyI | CCWWGG | 3 cut(s) | 652, 1469, 1836 |
| TaaI | ACNGT | 6 cut(s) | 115, 798, 876, 992, 1003, 1714 |
| TaqI | TCGA | 1 cut(s) | 679 |
| TfiI | GAWTC | 7 cut(s) | 579, 1037, 1052, 1076, 1163, 1181, 1502 |
| Tru1I | TTAA | 7 cut(s) | 87, 146, 156, 347, 1671, 1692, 1731 |
| Tru9I | TTAA | 7 cut(s) | 87, 146, 156, 347, 1671, 1692, 1731 |
| TscAI | CASTG | 3 cut(s) | 855, 978, 1237 |
| TseFI | GTSAC | 2 cut(s) | 842, 1519 |
| TseI | GCWGC | 6 cut(s) | 388, 527, 949, 980, 1678, 1832 |
| Tsp45I | GTSAC | 2 cut(s) | 842, 1519 |
| TspGWI | ACGGA | 1 cut(s) | 164 |
| TspRI | CASTG | 3 cut(s) | 855, 978, 1237 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1270 |
| Vha464I | CTTAAG | 1 cut(s) | 346 |
| VpaK11BI | GGWCC | 2 cut(s) | 431, 1209 |
| XapI | RAATTY | 4 cut(s) | 449, 1613, 1623, 1841 |
| XceI | RCATGY | 1 cut(s) | 523 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |
| XmnI | GAANNNNTTC | 3 cut(s) | 544, 910, 1845 |
| Zsp2I | ATGCAT | 1 cut(s) | 632 |