Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004067

Physical Location & Seq

Genomic Coordinates Forward (+)

13630714 .. 13635808

Gene Structure 5095 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00092080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGACAAGTGTACACAACGTTGAGGTAATATGGAGAGGAAACAAGATTACTGTAGAGATCGATCCTGATGCAACTCTCAAGGAGCTCGGGCACGAGCTGCAGAGATTGACTAATGTCAAAGCAGATACAATGAGGTTAATTGTGCCACAGTTGCCCAATAAAACCTCGAGATTGCTGTCTCCTTTCTCCGATGAGCACGAGCGCCTGAGTTTACAAGAAACTTCTATCCTTGAGGGCAAGTCCATTAGAATGATGGGAGCATTTGAGAATGAGGTCAACGAAGTTCTACAAAACGCAAAGGCAAACTTAAGGATAGCAGGATTTGATGAAGAGGAAAAGAGACTGAGGCAGAGAATGTCTGATAGGCCTCATACTTCCCTGAAACTTCCACAAGGACCTTACATCTTCAGTGATTTCCGCACACTTCAACTTCCAGGAATTGAGTTGAACCCTCCAGCATCCGAGGCCCTGAAAATAATGCACATGCTTGCTGCAGATCCTGGAATTGTTGCTATCATGAACAAGCATCGCTGGCATGTGGGAATCATGACTGAGATGGCCCCGGTCGGTTATGTTGGCATAAGTCCCAAATGCCTCCTCGGCTTCAACAAGAATAAGGGAGAAGAGATATCTCTGCGTCTTCGAACTGATGACCTCAAGGGTTTCCGGAAGTATGCAAGTATCAAGAAAACTCTTCTGCATGAGCTTGCTCACATGATATACTCTGAACATGATGCAACCTTTTATGCTTTTGATAAACAATTGAATCAAGAAGCTGAGAGTTTAGATTGGACGAGATCAAGAGGTCACACACTAAGCGGAGCTAGGTATACAGAGCATTATGAAAATTCCTATGTTGGAGAGAGAGGTAATTCTTCTCACAAGCTTGGAGGAAATATGCCTGATCAACTGGCCAGTGCCCGAGCATCTTCAGTTGCTGCTGCATATCATAGACTAGCAACTGCTTCTGATGATAGCATCTCCGAGGTACATGAACAGTCACATCTTGATGGTTTTGCGTTCCATGTGCATGAAAAAGACGAGCATAAGAACTTTTCAGGTAAAAGGGACTTGGAGATTGAAAGTTCTTACAAAGTTCAAAGGCAAAATGATCTGGAGCCTGACCCTGATGACTGTTTTGGCAATGAGAACAAGTTTGAGCCCAGTCTTGATGATTCTCAAGGAACTGATGAATCTTGCTCAAAATCTACAGGAAGCAGGAAAAATGTGGAACCTGATCCTGATAATCTCAAAGCTTGTTTGAAGTGTGATATCATAGCTGAACCTGAACCCGTACACCCTCAGGAGATGGAGATTTTGGAAAGCAGGTTTCAACCAAGGAATAATGTAGACGAACCTGATCCTGATGATTGCGATGTAAAGCGGGATGATTTGGGATCTAATTCAAATGGAAATATCACAAGACCTGGCAAGGATGAGTCTTTAGTTACTGAAACTACAAAATATGAATCGAATTCAAGGAAGGCTTATGAAGAACCCGATCCTGATGCCTCTATGTCAAATGGCATTATTCAGCCAGTATCTAGATCTAATGATAATTCGGTGCTTCCAAATGAAATATCCAGTATGCAGATCGATGAACCAGATCCAGATGATCAAGAAATTCAAATAATTCAAGACCCTGTTTCAGTTGCTTGTAAACGTATGCAGAAGACCATTGAGATGTTGCAAGCTGAGGTTAATCCCATACAAGCTACCACAGTCCTCCAAACTCTATTTAAGATAATAAGGAATGTTCTTGAACACCCAGGTGAATCGAAATACAGAAGACTGCGCAAGGCTAATCCCATGATTCAAAAGAACGTCGCAAACTACAAAGCTGCCATGGAATTTCTGTTTCTGATTGGCTTCAATGAAAATGTTGTGGATGAAATTGGACGACCAGAAACTTATCTAGTGTTGAAGCGGGATGATCCGGCCTTATTGTGGCTTGCCAAGTCTTCCCTGGAGACATGTATTACTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0009987 GO:0016787 GO:0016925 GO:0018193 GO:0018205 GO:0019538 GO:0032446 GO:0033554 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044877 GO:0046872 GO:0046914 GO:0050896 GO:0051716 GO:0070011 GO:0070628 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUB WLM

Protein Analysis

662

Amino Acids

74.78

Weight (kDa)

5.24

Isoelectric Point (pI)

49.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WLM	PF08325	148 - 319	1.4e-47	WLM domain
PUB	PF09409	572 - 649	1.2e-18	PUB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35690
fragaria_vesca	FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820 FvH4_6g41820
malus_domestica	MD09G1117000.v1.1 MD17G1108500.v1.1
prunus_persica	Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1 Prupe.3G206900_v2.0.a1
pyrus_communis	pycom09g04190 pycom09g04200 pycom17g10100
rosa_chinensis	RchiOBHm_Chr2g0157621
rosa_laevigata	RLG00000021001 RLG00000021004
rosa_multiflora	Rmu_co8368661.1_g000001 Rmu_sc0000195.1_g000050 Rmu_sc0005255.1_g000015 Rmu_sc0006475.1_g000002 Rmu_sc0015282.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092080
rosa_rugosa	Rorug02G0462400
rosa_samantha	Rh2AG526500 Rh2BG541400 Rh2CG511200 Rh2DG549900
rosa_wichuraiana	Rw2G043610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1796
Acc36I	ACCTGC	1 cut(s)	1317
AccI	GTMKAC	2 cut(s)	830, 1350
AccIII	TCCGGA	1 cut(s)	666
AciI	CCGC	4 cut(s)	418, 819, 1384, 1927
AclI	AACGTT	1 cut(s)	18
AclWI	GGATC	8 cut(s)	56, 491, 1232, 1355, 1405, 1496, 1601, 1928
AcoI	YGGCCR	1 cut(s)	912
AcsI	RAATTY	4 cut(s)	847, 1474, 1623, 1850
AcuI	CTGAAG	2 cut(s)	391, 915
AfaI	GTAC	3 cut(s)	12, 990, 1296
AfiI	CCNNNNNNNGG	1 cut(s)	1947
AflII	CTTAAG	1 cut(s)	307
AflIII	ACRYGT	1 cut(s)	1973
AjnI	CCWGG	5 cut(s)	433, 499, 1426, 1768, 1965
AleI	CACNNNNGTG	1 cut(s)	1770
Alw21I	GWGCWC	2 cut(s)	87, 198
Alw26I	GTCTC	3 cut(s)	183, 334, 1964
AlwI	GGATC	8 cut(s)	56, 491, 1232, 1355, 1405, 1496, 1601, 1928
AlwNI	CAGNNNCTG	2 cut(s)	500, 938
Ama87I	CYCGRG	3 cut(s)	86, 166, 921
Aor13HI	TCCGGA	1 cut(s)	666
AoxI	GGCC	5 cut(s)	365, 465, 558, 912, 1938
ApeKI	GCWGC	5 cut(s)	97, 491, 938, 941, 1841
ApoI	RAATTY	4 cut(s)	847, 1474, 1623, 1850
AspLEI	GCGC	2 cut(s)	204, 1797
AspS9I	GGNCC	3 cut(s)	395, 466, 559
AsuC2I	CCSGG	1 cut(s)	563
AsuHPI	GGTGA	1 cut(s)	1784
AsuII	TTCGAA	1 cut(s)	643
AvaI	CYCGRG	3 cut(s)	86, 166, 921
AvaII	GGWCC	1 cut(s)	395
AxyI	CCTNAGG	1 cut(s)	1302
BaeGI	GKGCMC	2 cut(s)	93, 922
BalI	TGGCCA	1 cut(s)	914
BanII	GRGCYC	2 cut(s)	87, 1164
BauI	CACGAG	2 cut(s)	92, 197
BbsI	GAAGAC	4 cut(s)	632, 1679, 1795, 1953
Bbv12I	GWGCWC	2 cut(s)	87, 198
BbvCI	CCTCAGC	1 cut(s)	1695
BbvI	GCAGC	5 cut(s)	84, 478, 925, 928, 1828
BccI	CCATC	4 cut(s)	247, 550, 1004, 1303
BcgI	CGANNNNNNTGC	4 cut(s)	50, 84, 1490, 1524
BciT130I	CCWGG	5 cut(s)	435, 501, 1428, 1770, 1967
BclI	TGATCA	2 cut(s)	904, 1615
BcnI	CCSGG	1 cut(s)	563
BcoDI	GTCTC	3 cut(s)	183, 334, 1964
BfaI	CTAG	4 cut(s)	825, 956, 1545, 1916
BfmI	CTRYAG	4 cut(s)	51, 98, 492, 1209
BfoI	RGCGCY	1 cut(s)	205
BfrI	CTTAAG	1 cut(s)	307
BfuAI	ACCTGC	1 cut(s)	1317
BglI	GCCNNNNNGGC	1 cut(s)	600
BglII	AGATCT	1 cut(s)	1547
BisI	GCNGC	5 cut(s)	98, 492, 939, 942, 1842
BlsI	GCNGC	5 cut(s)	99, 493, 940, 943, 1843
Bme1390I	CCNGG	6 cut(s)	435, 501, 563, 1428, 1770, 1967
Bme18I	GGWCC	1 cut(s)	395
BmeT110I	CYCGRG	3 cut(s)	86, 166, 921
BmgT120I	GGNCC	3 cut(s)	395, 466, 559
BmiI	GGNNCC	3 cut(s)	561, 1119, 1233
BmrFI	CCNGG	6 cut(s)	435, 501, 563, 1428, 1770, 1967
BmrI	ACTGGG	1 cut(s)	1158
BmsI	GCATC	7 cut(s)	58, 467, 535, 724, 935, 987, 1498
BmuI	ACTGGG	1 cut(s)	1158
BoxI	GACNNNNGTC	1 cut(s)	113
BpiI	GAAGAC	4 cut(s)	632, 1679, 1795, 1953
BpmI	CTGGAG	3 cut(s)	438, 1136, 1988
Bpu10I	CCTNAGC	1 cut(s)	1695
Bpu14I	TTCGAA	1 cut(s)	643
BpuEI	CTTGAG	4 cut(s)	62, 251, 641, 1164
BpuMI	CCSGG	1 cut(s)	563
Bsa29I	ATCGAT	2 cut(s)	60, 1596
BsaJI	CCNNGG	8 cut(s)	462, 561, 598, 984, 1337, 1768, 1845, 1965
BsaWI	WCCGGW	1 cut(s)	666
Bsc4I	CCNNNNNNNGG	1 cut(s)	1947
Bse1I	ACTGG	5 cut(s)	915, 915, 1164, 1538, 1584
Bse21I	CCTNAGG	1 cut(s)	1302
Bse3DI	GCAATG	1 cut(s)	1150
BseAI	TCCGGA	1 cut(s)	666
BseBI	CCWGG	5 cut(s)	435, 501, 1428, 1770, 1967
BseCI	ATCGAT	2 cut(s)	60, 1596
BseDI	CCNNGG	8 cut(s)	462, 561, 598, 984, 1337, 1768, 1845, 1965
BseGI	GGATG	5 cut(s)	458, 1393, 1441, 1894, 1936
BseLI	CCNNNNNNNGG	1 cut(s)	1947
BseMI	GCAATG	1 cut(s)	1150
BseMII	CTCAG	6 cut(s)	197, 335, 543, 768, 1316, 1686
BseNI	ACTGG	5 cut(s)	915, 915, 1164, 1538, 1584
BseRI	GAGGAG	1 cut(s)	587
BseSI	GKGCMC	2 cut(s)	93, 922
BseXI	GCAGC	5 cut(s)	84, 478, 925, 928, 1828
Bsh1285I	CGRYCG	1 cut(s)	567
BshFI	GGCC	5 cut(s)	367, 467, 560, 914, 1940
BshVI	ATCGAT	2 cut(s)	60, 1596
BsiEI	CGRYCG	1 cut(s)	567
BsiHKAI	GWGCWC	2 cut(s)	87, 198
BsiHKCI	CYCGRG	3 cut(s)	86, 166, 921
BsiSI	CCGG	3 cut(s)	563, 667, 1937
BslFI	GGGAC	2 cut(s)	570, 1082
BslI	CCNNNNNNNGG	1 cut(s)	1947
BsmAI	GTCTC	3 cut(s)	183, 334, 1964
BsmFI	GGGAC	2 cut(s)	570, 1082
BsnI	GGCC	5 cut(s)	367, 467, 560, 914, 1940
BsoBI	CYCGRG	3 cut(s)	86, 166, 921
Bsp119I	TTCGAA	1 cut(s)	643
Bsp1286I	GDGCHC	5 cut(s)	87, 93, 198, 922, 1164
Bsp13I	TCCGGA	1 cut(s)	666
Bsp1407I	TGTACA	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	1845
BspACI	CCGC	4 cut(s)	418, 819, 1384, 1927
BspANI	GGCC	5 cut(s)	367, 467, 560, 914, 1940
BspCNI	CTCAG	6 cut(s)	198, 336, 544, 769, 1315, 1687
BspDI	ATCGAT	2 cut(s)	60, 1596
BspEI	TCCGGA	1 cut(s)	666
BspHI	TCATGA	2 cut(s)	516, 546
BspLI	GGNNCC	3 cut(s)	561, 1119, 1233
BspMAI	CTGCAG	2 cut(s)	102, 496
BspMI	ACCTGC	1 cut(s)	1317
BspPI	GGATC	8 cut(s)	56, 491, 1232, 1355, 1405, 1496, 1601, 1928
BspT104I	TTCGAA	1 cut(s)	643
BspTI	CTTAAG	1 cut(s)	307
BsrDI	GCAATG	1 cut(s)	1150
BsrGI	TGTACA	1 cut(s)	10
BsrI	ACTGG	5 cut(s)	915, 915, 1164, 1538, 1584
BssECI	CCNNGG	8 cut(s)	462, 561, 598, 984, 1337, 1768, 1845, 1965
BssNAI	GTATAC	1 cut(s)	831
BssSI	CACGAG	2 cut(s)	92, 197
BssT1I	CCWWGG	2 cut(s)	1337, 1845
Bst1107I	GTATAC	1 cut(s)	831
Bst2BI	CACGAG	2 cut(s)	92, 197
Bst2UI	CCWGG	5 cut(s)	435, 501, 1428, 1770, 1967
Bst4CI	ACNGT	6 cut(s)	52, 150, 999, 1136, 1723, 1984
Bst6I	CTCTTC	3 cut(s)	324, 618, 699
BstAFI	CTTAAG	1 cut(s)	307
BstAPI	GCANNNNNTGC	1 cut(s)	97
BstAUI	TGTACA	1 cut(s)	10
BstBI	TTCGAA	1 cut(s)	643
BstC8I	GCNNGC	5 cut(s)	489, 533, 708, 1692, 1953
BstDEI	CTNAG	7 cut(s)	206, 344, 552, 777, 815, 1302, 1695
BstDSI	CCRYGG	1 cut(s)	1845
BstF5I	GGATG	5 cut(s)	458, 1393, 1441, 1894, 1936
BstH2I	RGCGCY	1 cut(s)	205
BstHHI	GCGC	2 cut(s)	204, 1797
BstMAI	GTCTC	3 cut(s)	183, 334, 1964
BstMCI	CGRYCG	1 cut(s)	567
BstMWI	GCNNNNNNNGC	5 cut(s)	97, 151, 464, 532, 600
BstNI	CCWGG	5 cut(s)	435, 501, 1428, 1770, 1967
BstNSI	RCATGY	3 cut(s)	487, 539, 1977
BstPAI	GACNNNNGTC	1 cut(s)	113
BstSCI	CCNGG	6 cut(s)	433, 499, 561, 1426, 1768, 1965
BstSFI	CTRYAG	4 cut(s)	51, 98, 492, 1209
BstSLI	GKGCMC	2 cut(s)	93, 922
BstV1I	GCAGC	5 cut(s)	84, 478, 925, 928, 1828
BstV2I	GAAGAC	4 cut(s)	632, 1679, 1795, 1953
BstX2I	RGATCY	4 cut(s)	496, 1397, 1547, 1606
BstYI	RGATCY	4 cut(s)	496, 1397, 1547, 1606
BstZ17I	GTATAC	1 cut(s)	831
Bsu15I	ATCGAT	2 cut(s)	60, 1596
Bsu36I	CCTNAGG	1 cut(s)	1302
BsuRI	GGCC	5 cut(s)	367, 467, 560, 914, 1940
BsuTUI	ATCGAT	2 cut(s)	60, 1596
BtgI	CCRYGG	1 cut(s)	1845
BtgZI	GCGATG	2 cut(s)	512, 1389
BtsCI	GGATG	5 cut(s)	458, 1393, 1441, 1894, 1936
BtsIMutI	CAGTG	2 cut(s)	415, 922
BveI	ACCTGC	1 cut(s)	1317
Cac8I	GCNNGC	5 cut(s)	489, 533, 708, 1692, 1953
CaiI	CAGNNNCTG	2 cut(s)	500, 938
CciI	TCATGA	2 cut(s)	516, 546
CfoI	GCGC	2 cut(s)	204, 1797
Cfr13I	GGNCC	3 cut(s)	395, 466, 559
ClaI	ATCGAT	2 cut(s)	60, 1596
CseI	GACGC	1 cut(s)	626
Csp6I	GTAC	3 cut(s)	11, 989, 1295
CviQI	GTAC	3 cut(s)	11, 989, 1295
DdeI	CTNAG	7 cut(s)	206, 344, 552, 777, 815, 1302, 1695
EaeI	YGGCCR	1 cut(s)	912
Eam1104I	CTCTTC	3 cut(s)	324, 618, 699
EarI	CTCTTC	3 cut(s)	324, 618, 699
Ecl136II	GAGCTC	1 cut(s)	85
Eco130I	CCWWGG	2 cut(s)	1337, 1845
Eco147I	AGGCCT	1 cut(s)	367
Eco24I	GRGCYC	2 cut(s)	87, 1164
Eco32I	GATATC	2 cut(s)	630, 1273
Eco47I	GGWCC	1 cut(s)	395
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	2 cut(s)	391, 915
Eco81I	CCTNAGG	1 cut(s)	1302
Eco88I	CYCGRG	3 cut(s)	86, 166, 921
EcoICRI	GAGCTC	1 cut(s)	85
EcoO109I	RGGNCCY	2 cut(s)	395, 466
EcoRI	GAATTC	1 cut(s)	1474
EcoRII	CCWGG	5 cut(s)	433, 499, 1426, 1768, 1965
EcoRV	GATATC	2 cut(s)	630, 1273
EcoT14I	CCWWGG	2 cut(s)	1337, 1845
EcoT38I	GRGCYC	2 cut(s)	87, 1164
ErhI	CCWWGG	2 cut(s)	1337, 1845
FalI	AAGNNNNNCTT	4 cut(s)	290, 322, 1471, 1503
FaqI	GGGAC	2 cut(s)	570, 1082
FauI	CCCGC	2 cut(s)	1377, 1920
FbaI	TGATCA	2 cut(s)	904, 1615
FblI	GTMKAC	2 cut(s)	830, 1350
Fnu4HI	GCNGC	5 cut(s)	98, 492, 939, 942, 1842
FokI	GGATG	5 cut(s)	445, 1400, 1448, 1901, 1943
FriOI	GRGCYC	2 cut(s)	87, 1164
Fsp4HI	GCNGC	5 cut(s)	98, 492, 939, 942, 1842
FspBI	CTAG	4 cut(s)	825, 956, 1545, 1916
FspI	TGCGCA	1 cut(s)	1796
GlaI	GCGC	2 cut(s)	203, 1796
GluI	GCNGC	5 cut(s)	98, 492, 939, 942, 1842
GsuI	CTGGAG	3 cut(s)	438, 1136, 1988
HaeII	RGCGCY	1 cut(s)	205
HaeIII	GGCC	5 cut(s)	367, 467, 560, 914, 1940
HapII	CCGG	3 cut(s)	563, 667, 1937
HgaI	GACGC	1 cut(s)	626
HhaI	GCGC	2 cut(s)	204, 1797
Hin6I	GCGC	2 cut(s)	202, 1795
HinP1I	GCGC	2 cut(s)	202, 1795
HincII	GTYRAC	1 cut(s)	277
HindII	GTYRAC	1 cut(s)	277
HindIII	AAGCTT	2 cut(s)	884, 1254
HinfI	GANTC	8 cut(s)	543, 766, 1175, 1193, 1439, 1469, 1775, 1813
HpaII	CCGG	3 cut(s)	563, 667, 1937
HphI	GGTGA	1 cut(s)	1784
Hpy166II	GTNNAC	8 cut(s)	11, 13, 212, 277, 831, 1297, 1351, 1661
Hpy188I	TCNGA	7 cut(s)	190, 361, 463, 727, 970, 985, 1863
Hpy8I	GTNNAC	8 cut(s)	11, 13, 212, 277, 831, 1297, 1351, 1661
Hpy99I	CGWCG	1 cut(s)	1829
HpyAV	CCTTC	1 cut(s)	1477
HpyCH4III	ACNGT	6 cut(s)	52, 150, 999, 1136, 1723, 1984
HpyCH4IV	ACGT	3 cut(s)	18, 1663, 1824
HpyF10VI	GCNNNNNNNGC	5 cut(s)	97, 151, 464, 532, 600
HpyF3I	CTNAG	7 cut(s)	206, 344, 552, 777, 815, 1302, 1695
HpySE526I	ACGT	3 cut(s)	18, 1663, 1824
HspAI	GCGC	2 cut(s)	202, 1795
Kpn2I	TCCGGA	1 cut(s)	666
Ksp22I	TGATCA	2 cut(s)	904, 1615
LmnI	GCTCC	4 cut(s)	82, 257, 821, 1117
Lsp1109I	GCAGC	5 cut(s)	84, 478, 925, 928, 1828
LweI	GCATC	7 cut(s)	58, 467, 535, 724, 935, 987, 1498
MaeI	CTAG	4 cut(s)	825, 956, 1545, 1916
MaeII	ACGT	3 cut(s)	18, 1663, 1824
MaeIII	GTNAC	3 cut(s)	806, 999, 1447
MfeI	CAATTG	1 cut(s)	761
MflI	RGATCY	4 cut(s)	496, 1397, 1547, 1606
MhlI	GDGCHC	5 cut(s)	87, 93, 198, 922, 1164
MlsI	TGGCCA	1 cut(s)	914
MluNI	TGGCCA	1 cut(s)	914
MlyI	GAGTC	1 cut(s)	1448
MmeI	TCCRAC	1 cut(s)	838
Mox20I	TGGCCA	1 cut(s)	914
MroI	TCCGGA	1 cut(s)	666
MscI	TGGCCA	1 cut(s)	914
MseI	TTAA	4 cut(s)	137, 308, 1701, 1740
MslI	CAYNNNNRTG	5 cut(s)	248, 1008, 1029, 1682, 1770
Msp20I	TGGCCA	1 cut(s)	914
MspCI	CTTAAG	1 cut(s)	307
MspI	CCGG	3 cut(s)	563, 667, 1937
MspR9I	CCNGG	6 cut(s)	435, 501, 563, 1428, 1770, 1967
MunI	CAATTG	1 cut(s)	761
MvaI	CCWGG	5 cut(s)	435, 501, 1428, 1770, 1967
MwoI	GCNNNNNNNGC	5 cut(s)	97, 151, 464, 532, 600
NciI	CCSGG	1 cut(s)	563
NcoI	CCATGG	1 cut(s)	1845
NlaIV	GGNNCC	3 cut(s)	561, 1119, 1233
NmeAIII	GCCGAG	1 cut(s)	579
NmuCI	GTSAC	2 cut(s)	806, 999
NsbI	TGCGCA	1 cut(s)	1796
NspI	RCATGY	3 cut(s)	487, 539, 1977
NspV	TTCGAA	1 cut(s)	643
OliI	CACNNNNGTG	1 cut(s)	1770
PaeR7I	CTCGAG	1 cut(s)	166
PagI	TCATGA	2 cut(s)	516, 546
PceI	AGGCCT	1 cut(s)	367
PciI	ACATGT	1 cut(s)	1973
PfeI	GAWTC	7 cut(s)	543, 766, 1175, 1193, 1469, 1775, 1813
PfoI	TCCNGGA	2 cut(s)	433, 499
PkrI	GCNGC	5 cut(s)	99, 493, 940, 943, 1843
PleI	GAGTC	1 cut(s)	1447
PpsI	GAGTC	1 cut(s)	1447
PpuMI	RGGWCCY	1 cut(s)	395
PscI	ACATGT	1 cut(s)	1973
PshAI	GACNNNNGTC	1 cut(s)	113
Psp124BI	GAGCTC	1 cut(s)	87
Psp1406I	AACGTT	1 cut(s)	18
Psp5II	RGGWCCY	1 cut(s)	395
Psp6I	CCWGG	5 cut(s)	433, 499, 1426, 1768, 1965
PspGI	CCWGG	5 cut(s)	433, 499, 1426, 1768, 1965
PspN4I	GGNNCC	3 cut(s)	561, 1119, 1233
PspPI	GGNCC	3 cut(s)	395, 466, 559
PspPPI	RGGWCCY	1 cut(s)	395
PstI	CTGCAG	2 cut(s)	102, 496
PstNI	CAGNNNCTG	2 cut(s)	500, 938
PsuI	RGATCY	4 cut(s)	496, 1397, 1547, 1606
RsaI	GTAC	3 cut(s)	12, 990, 1296
RsaNI	GTAC	3 cut(s)	11, 989, 1295
RseI	CAYNNNNRTG	5 cut(s)	248, 1008, 1029, 1682, 1770
SacI	GAGCTC	1 cut(s)	87
SaqAI	TTAA	4 cut(s)	137, 308, 1701, 1740
SatI	GCNGC	5 cut(s)	98, 492, 939, 942, 1842
Sau96I	GGNCC	3 cut(s)	395, 466, 559
SchI	GAGTC	1 cut(s)	1448
ScrFI	CCNGG	6 cut(s)	435, 501, 563, 1428, 1770, 1967
SduI	GDGCHC	5 cut(s)	87, 93, 198, 922, 1164
SfaNI	GCATC	7 cut(s)	58, 467, 535, 724, 935, 987, 1498
SfcI	CTRYAG	4 cut(s)	51, 98, 492, 1209
Sfr274I	CTCGAG	1 cut(s)	166
SfuI	TTCGAA	1 cut(s)	643
SinI	GGWCC	1 cut(s)	395
SlaI	CTCGAG	1 cut(s)	166
SmiMI	CAYNNNNRTG	5 cut(s)	248, 1008, 1029, 1682, 1770
SmlI	CTYRAG	6 cut(s)	77, 166, 230, 307, 656, 1179
SmoI	CTYRAG	6 cut(s)	77, 166, 230, 307, 656, 1179
SseBI	AGGCCT	1 cut(s)	367
SsiI	CCGC	4 cut(s)	418, 819, 1384, 1927
SspMI	CTAG	4 cut(s)	825, 956, 1545, 1916
SstI	GAGCTC	1 cut(s)	87
StuI	AGGCCT	1 cut(s)	367
StyD4I	CCNGG	6 cut(s)	433, 499, 561, 1426, 1768, 1965
StyI	CCWWGG	2 cut(s)	1337, 1845
TaaI	ACNGT	6 cut(s)	52, 150, 999, 1136, 1723, 1984
TaiI	ACGT	3 cut(s)	21, 1666, 1827
TaqI	TCGA	6 cut(s)	60, 167, 643, 1472, 1596, 1778
TatI	WGTACW	1 cut(s)	10
TfiI	GAWTC	7 cut(s)	543, 766, 1175, 1193, 1469, 1775, 1813
Tru1I	TTAA	4 cut(s)	137, 308, 1701, 1740
Tru9I	TTAA	4 cut(s)	137, 308, 1701, 1740
TscAI	CASTG	2 cut(s)	415, 922
TseFI	GTSAC	2 cut(s)	806, 999
TseI	GCWGC	5 cut(s)	97, 491, 938, 941, 1841
Tsp45I	GTSAC	2 cut(s)	806, 999
TspRI	CASTG	2 cut(s)	415, 922
Vha464I	CTTAAG	1 cut(s)	307
VpaK11BI	GGWCC	1 cut(s)	395
XapI	RAATTY	4 cut(s)	847, 1474, 1623, 1850
XbaI	TCTAGA	1 cut(s)	1544
XceI	RCATGY	3 cut(s)	487, 539, 1977
XcmI	CCANNNNNNNNNTGG	2 cut(s)	250, 1963
XhoI	CTCGAG	1 cut(s)	166
XmiI	GTMKAC	2 cut(s)	830, 1350
XspI	CTAG	4 cut(s)	825, 956, 1545, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.