Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Forward (+)

10823268 .. 10827419

Gene Structure 4152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1139300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGCCACTGCTCCCGCTGAAAATCCCGATATAACCATGACCCAAATCGAAGAAGAAGAACCCCCTCAACAAGAAAGCCCTTATTCCGAACCACCACATTCCCAATCCACAACCCTATCCCTAGACCTCCCTCAAGACCAAGATATCCAACAAAACCCACCTCTCCAATCGCAGCCAAGCCCTAAAGGCAAATCCGATGAATTTCCCGCCCGATCTCCTCATGGCACCACCACCATTACCTTCTACCGCCGCGGGAAGAAGCGAAAGAAGTTGGGTTCGAAGCGGAAAGCCGCCGCTTCGGGGAACAGCAAGGCCCAGCAGAAGCTTCAGACCCAGAGAGAGGTCCTAAATCCAATTCCCTTCGTGCCCGCCAAAAATCTCGACTTTGAGAAGCACGAGAAGCTGTTGAAGCGGCTCAACCTGTGGGACTTTGTCCACGTCGAGTTTGATCGGAATCTTCGGGTTGATCTTCTCGCTGAGTTAATTTCCAGTTTCAACCCTACCCAGCGGGGCAGCTACGTCAATGGGTCAAAGGTTAAGGTCAACCGGGCCGACTTGGCCCGGGCCTTGAAGCTTCCTTCAAAACCGGTGAAGAAGGGTGGTGCTGTGGCAGCAGCGGATGGTGCTGAGGAGCCTCCTGCAGAGGCTGCTTCGGAGGAGTCCATAGCTTTTATCGAAGAATTGGTATCGAATTGGGTGCTTTTGCACGAGGATACATGGATGATGCCGAGCGAGGTGCTGAATTGGACTAAGGCAATCAAAGAGGGGCAGTTTGTGAAGGTGGATTGGGCCGGTTTGATTTGGTTCATGGTGGAGAAGGAGTTGGCTCAGGCCCCTAAATTGGTGGATTGTTACTATGCGTCGCATTTGCAGTGTTTGATAAAATCACAGCACGCGAGGTTCCTTATGGTGAAGGAACAAGAGACTCCTCAGTTTGATATTAATGCTGTTGATGTTGATGCGGTTGATGTCGATGCAAAAATGGAAGAAGAGGAGGAGGAAGAGGATGGTAGCGGGGGTGTAAAAATGGGTGGGGAGGATGATTTACATGGACGCGGCGGATTGGAAGAGCACAACATTGAATTATGCCTTGGCCAAGACAATGTGGATACAGATGACTTTAGGCAAGAGCAAGACAATGTGGATAGTATGGATGTTAGGCAAGAGCAAGGCATTGTGGATAGAGCTGATATTAGGCAGGACAATGTGGATAGAACTGATGTTGGGCAAGAAAACCTCGAGAAATCTGGTGTCGAGAAGGAGCAAGTTGGGGTTGAGGTTGTAATGGATTTTGAAGAATGTAAGGTGGAAGAGCCTGGCCAATGGTTTTTGGGTGGGCAGGGCAGTGCAAGTGAACCTGTTTTGCAGCGGTGTAATCTTGGTGGAGTTAATTTGGGTTGTGGGGAGAAGGGGAAAAAAGATATGGAGTTTTTTGAAGGAATAGATGAAGAAGGAAACGAAGAGGAAGTAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGGAGGGAGGTTTTCACCTTTCACTTAAGGATAGGCCTTTAGAGGGTTTGGCGTCGGGTAGTCTTATTCATCCAATGGAAGTAGCACATAACCCTCTTAGTTTAGATATGTCAATGGGTGATCAGTTTGCTGGGGAGTTTCTTTCTTCAAGGGACGATAGTCGAATGCATCCTGGTAGTTCCTCATTTTTTGGAAGTGGTGGTCTTGAGAGAGAGCTTGTCCATGAAAATGATAACTCTTCTCATCATCCTCTCAATGGTAATAAGCGGTTGAGGATGGGTGGCCCTTGGGATGGTAAGGTGTCAGGTGGTGACTTTGATTCGTGCGTGGAGCAAGTGCAGCACTGGATGGAAAAGGCTAAGATGGTGTATGCGCAGAAAGAACAAGTTTGCGAGCAATCGATGGTTGGCCAGCAGATGTTACTGGATGAGTTACAGCAAAGGGAGGAGGTGATTGGTCACTTGCAGAAGGCCAAGGCTGAAGAGCAGCATAAGAGAAAAATGGAGATGTATCGGCTTGAGCGTGAACTCCATGTAATGGGGAATCTCTTGGATGGCTACAGGAAGGCTTTAAAGGAAACACAAAAAGCATTTGCTGAATATAGAGCACGTTGTCCACAATCTGATGAGCCACTCTACAGGGATGTTCCTGGGTCTGGTGGTCTTGTTTTGAGCACCATGGAACTGGCAAAGCAACGCCTAAAGAAAGAAGAAGAGGAAAGGATGACTCGTCTGGTACTTGAAAAACAGATTAAGGACTTTGAAGCTGGGTGGATTAGCAAATTTGAACCACACCCGAAGAGTGTTGAATTACTGAGTAACAGGTTGCAAGATGTAGAGTTGGAAGTGAAACTTCTTATTGAACAGATTGCAAAACGGAGGATTGCAGAAATACCAGAATCTGCTCCAAATGAAAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

811

Amino Acids

91.45

Weight (kDa)

4.77

Isoelectric Point (pI)

58.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1884
AccB1I	GGYRCC	1 cut(s)	224
AccB7I	CCANNNNNTGG	1 cut(s)	2047
AccII	CGCG	3 cut(s)	252, 896, 1056
AcoI	YGGCCR	4 cut(s)	3, 1093, 1318, 1918
AcsI	RAATTY	2 cut(s)	200, 2291
AcuI	CTGAAG	2 cut(s)	311, 2010
AcyI	GRCGYC	1 cut(s)	1562
AfaI	GTAC	1 cut(s)	2247
AfiI	CCNNNNNNNGG	8 cut(s)	300, 340, 841, 1553, 1766, 1802, 2047, 2165
AflII	CTTAAG	1 cut(s)	1535
AgeI	ACCGGT	1 cut(s)	586
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	3 cut(s)	1315, 1681, 2158
AjuI	GAANNNNNNNTTGG	2 cut(s)	1074, 1106
AluBI	AGCT	8 cut(s)	325, 403, 516, 574, 668, 1187, 1726, 2276
AluI	AGCT	8 cut(s)	325, 403, 516, 574, 668, 1187, 1726, 2276
Alw21I	GWGCWC	3 cut(s)	1074, 2119, 2186
Alw26I	GTCTC	1 cut(s)	917
AlwNI	CAGNNNCTG	2 cut(s)	647, 2411
Ama87I	CYCGRG	2 cut(s)	561, 1238
ApeKI	GCWGC	8 cut(s)	172, 513, 611, 614, 647, 1366, 1849, 1996
ApoI	RAATTY	2 cut(s)	200, 2291
AseI	ATTAAT	1 cut(s)	942
AsiGI	ACCGGT	1 cut(s)	586
AspLEI	GCGC	1 cut(s)	1885
AspS9I	GGNCC	8 cut(s)	313, 343, 549, 559, 564, 789, 832, 1793
AsuC2I	CCSGG	3 cut(s)	548, 562, 563
AsuHPI	GGTGA	6 cut(s)	601, 922, 1517, 1640, 1832, 1972
AsuII	TTCGAA	1 cut(s)	278
AvaI	CYCGRG	2 cut(s)	561, 1238
AvaII	GGWCC	1 cut(s)	343
BaeGI	GKGCMC	1 cut(s)	369
BalI	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
BanI	GGYRCC	1 cut(s)	224
BauI	CACGAG	2 cut(s)	395, 707
Bbv12I	GWGCWC	3 cut(s)	1074, 2119, 2186
BbvCI	CCTCAGC	1 cut(s)	627
BbvI	GCAGC	8 cut(s)	184, 525, 623, 626, 634, 1378, 1861, 2008
BccI	CCATC	8 cut(s)	614, 1001, 1780, 1796, 1852, 1867, 1906, 2057
BcgI	CGANNNNNNTGC	4 cut(s)	679, 713, 718, 752
BciT130I	CCWGG	3 cut(s)	1317, 1683, 2160
BciVI	GTATCC	2 cut(s)	706, 1102
BclI	TGATCA	1 cut(s)	1630
BcnI	CCSGG	3 cut(s)	548, 562, 563
BcoDI	GTCTC	1 cut(s)	917
BfaI	CTAG	1 cut(s)	122
BfmI	CTRYAG	3 cut(s)	639, 2068, 2146
BfrI	CTTAAG	1 cut(s)	1535
BfuI	GTATCC	2 cut(s)	706, 1102
BglI	GCCNNNNNGGC	2 cut(s)	186, 557
Bme1390I	CCNGG	6 cut(s)	548, 562, 563, 1317, 1683, 2160
Bme18I	GGWCC	1 cut(s)	343
BmeT110I	CYCGRG	2 cut(s)	561, 1238
BmgBI	CACGTC	1 cut(s)	439
BmgT120I	GGNCC	8 cut(s)	313, 343, 549, 559, 564, 789, 832, 1793
BmiI	GGNNCC	4 cut(s)	226, 633, 834, 902
BmrFI	CCNGG	6 cut(s)	548, 562, 563, 1317, 1683, 2160
BmsI	GCATC	4 cut(s)	714, 949, 964, 1687
BoxI	GACNNNNGTC	1 cut(s)	1668
Bpu10I	CCTNAGC	2 cut(s)	627, 828
Bpu14I	TTCGAA	1 cut(s)	278
BpuEI	CTTGAG	3 cut(s)	117, 1736, 2048
BpuMI	CCSGG	3 cut(s)	548, 562, 563
Bsa29I	ATCGAT	1 cut(s)	1910
BsaBI	GATNNNNATC	1 cut(s)	453
BsaHI	GRCGYC	1 cut(s)	1562
BsaJI	CCNNGG	7 cut(s)	250, 561, 1090, 1796, 1983, 2159, 2187
BsaWI	WCCGGW	1 cut(s)	586
BsaXI	ACNNNNNCTCC	2 cut(s)	806, 836
Bsc4I	CCNNNNNNNGG	8 cut(s)	300, 340, 841, 1553, 1766, 1802, 2047, 2165
Bse118I	RCCGGY	2 cut(s)	586, 791
Bse1I	ACTGG	4 cut(s)	489, 1859, 1938, 2199
Bse8I	GATNNNNATC	1 cut(s)	453
BseBI	CCWGG	3 cut(s)	1317, 1683, 2160
BseCI	ATCGAT	1 cut(s)	1910
BseDI	CCNNGG	7 cut(s)	250, 561, 1090, 1796, 1983, 2159, 2187
BseJI	GATNNNNATC	1 cut(s)	453
BseLI	CCNNNNNNNGG	8 cut(s)	300, 340, 841, 1553, 1766, 1802, 2047, 2165
BseMII	CTCAG	5 cut(s)	468, 618, 842, 944, 2315
BseNI	ACTGG	4 cut(s)	489, 1859, 1938, 2199
BseSI	GKGCMC	1 cut(s)	369
BseXI	GCAGC	8 cut(s)	184, 525, 623, 626, 634, 1378, 1861, 2008
BseYI	CCCAGC	4 cut(s)	315, 504, 1640, 2276
BsgI	GTGCAG	1 cut(s)	1868
Bsh1236I	CGCG	3 cut(s)	252, 896, 1056
BshNI	GGYRCC	1 cut(s)	224
BshTI	ACCGGT	1 cut(s)	586
BshVI	ATCGAT	1 cut(s)	1910
BsiHKAI	GWGCWC	3 cut(s)	1074, 2119, 2186
BsiHKCI	CYCGRG	2 cut(s)	561, 1238
BsiSI	CCGG	4 cut(s)	547, 562, 587, 792
BslFI	GGGAC	2 cut(s)	440, 1676
BslI	CCNNNNNNNGG	8 cut(s)	300, 340, 841, 1553, 1766, 1802, 2047, 2165
BsmAI	GTCTC	1 cut(s)	917
BsmFI	GGGAC	2 cut(s)	440, 1676
BsmI	GAATGC	1 cut(s)	1680
BsoBI	CYCGRG	2 cut(s)	561, 1238
Bsp119I	TTCGAA	1 cut(s)	278
Bsp1286I	GDGCHC	4 cut(s)	369, 1074, 2119, 2186
Bsp143I	GATC	4 cut(s)	212, 448, 466, 1630
Bsp19I	CCATGG	1 cut(s)	2187
BspCNI	CTCAG	5 cut(s)	469, 619, 841, 943, 2316
BspDI	ATCGAT	1 cut(s)	1910
BspFNI	CGCG	3 cut(s)	252, 896, 1056
BspLI	GGNNCC	4 cut(s)	226, 633, 834, 902
BspMAI	CTGCAG	1 cut(s)	643
BspQI	GCTCTTC	3 cut(s)	1062, 1305, 1986
BspT104I	TTCGAA	1 cut(s)	278
BspT107I	GGYRCC	1 cut(s)	224
BspTI	CTTAAG	1 cut(s)	1535
BsrFI	RCCGGY	2 cut(s)	586, 791
BsrI	ACTGG	4 cut(s)	489, 1859, 1938, 2199
BssAI	RCCGGY	2 cut(s)	586, 791
BssECI	CCNNGG	7 cut(s)	250, 561, 1090, 1796, 1983, 2159, 2187
BssMI	GATC	4 cut(s)	212, 448, 466, 1630
BssNI	GRCGYC	1 cut(s)	1562
BssSI	CACGAG	2 cut(s)	395, 707
BssT1I	CCWWGG	4 cut(s)	1090, 1796, 1983, 2187
Bst2BI	CACGAG	2 cut(s)	395, 707
Bst2UI	CCWGG	3 cut(s)	1317, 1683, 2160
BstACI	GRCGYC	1 cut(s)	1562
BstAFI	CTTAAG	1 cut(s)	1535
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstBI	TTCGAA	1 cut(s)	278
BstC8I	GCNNGC	4 cut(s)	369, 894, 1904, 1922
BstDEI	CTNAG	8 cut(s)	477, 627, 750, 828, 930, 1607, 1869, 2324
BstDSI	CCRYGG	2 cut(s)	250, 2187
BstFNI	CGCG	3 cut(s)	252, 896, 1056
BstHHI	GCGC	1 cut(s)	1885
BstKTI	GATC	4 cut(s)	215, 451, 469, 1633
BstMAI	GTCTC	1 cut(s)	917
BstMBI	GATC	4 cut(s)	212, 448, 466, 1630
BstMWI	GCNNNNNNNGC	8 cut(s)	186, 400, 409, 557, 611, 623, 647, 1849
BstNI	CCWGG	3 cut(s)	1317, 1683, 2160
BstPAI	GACNNNNGTC	1 cut(s)	1668
BstSCI	CCNGG	6 cut(s)	546, 560, 561, 1315, 1681, 2158
BstSFI	CTRYAG	3 cut(s)	639, 2068, 2146
BstSLI	GKGCMC	1 cut(s)	369
BstUI	CGCG	3 cut(s)	252, 896, 1056
BstV1I	GCAGC	8 cut(s)	184, 525, 623, 626, 634, 1378, 1861, 2008
BstXI	CCANNNNNNTGG	1 cut(s)	2194
Bsu15I	ATCGAT	1 cut(s)	1910
BsuI	GTATCC	2 cut(s)	706, 1102
BsuTUI	ATCGAT	1 cut(s)	1910
BtgI	CCRYGG	2 cut(s)	250, 2187
BtrI	CACGTC	1 cut(s)	439
BtsI	GCAGTG	3 cut(s)	6, 878, 1351
BtsIMutI	CAGTG	4 cut(s)	6, 878, 1351, 1852
Cac8I	GCNNGC	4 cut(s)	369, 894, 1904, 1922
CaiI	CAGNNNCTG	2 cut(s)	647, 2411
CfoI	GCGC	1 cut(s)	1885
Cfr10I	RCCGGY	2 cut(s)	586, 791
Cfr13I	GGNCC	8 cut(s)	313, 343, 549, 559, 564, 789, 832, 1793
Cfr42I	CCGCGG	1 cut(s)	253
Cfr9I	CCCGGG	1 cut(s)	561
ClaI	ATCGAT	1 cut(s)	1910
CseI	GACGC	3 cut(s)	849, 1062, 1551
Csp6I	GTAC	1 cut(s)	2246
CspAI	ACCGGT	1 cut(s)	586
CviAII	CATG	8 cut(s)	37, 221, 717, 808, 1049, 1733, 2042, 2188
CviQI	GTAC	1 cut(s)	2246
DdeI	CTNAG	8 cut(s)	477, 627, 750, 828, 930, 1607, 1869, 2324
DpnI	GATC	4 cut(s)	214, 450, 468, 1632
DpnII	GATC	4 cut(s)	212, 448, 466, 1630
DraI	TTTAAA	1 cut(s)	2082
EaeI	YGGCCR	4 cut(s)	3, 1093, 1318, 1918
EciI	GGCGGA	1 cut(s)	1074
Eco130I	CCWWGG	4 cut(s)	1090, 1796, 1983, 2187
Eco147I	AGGCCT	1 cut(s)	1546
Eco32I	GATATC	1 cut(s)	145
Eco47I	GGWCC	1 cut(s)	343
Eco57I	CTGAAG	2 cut(s)	311, 2010
Eco88I	CYCGRG	2 cut(s)	561, 1238
EcoO109I	RGGNCCY	2 cut(s)	343, 832
EcoRII	CCWGG	3 cut(s)	1315, 1681, 2158
EcoRV	GATATC	1 cut(s)	145
EcoT14I	CCWWGG	4 cut(s)	1090, 1796, 1983, 2187
EcoT22I	ATGCAT	1 cut(s)	1680
ErhI	CCWWGG	4 cut(s)	1090, 1796, 1983, 2187
FaeI	CATG	8 cut(s)	40, 224, 720, 811, 1052, 1736, 2045, 2191
FalI	AAGNNNNNCTT	2 cut(s)	2346, 2378
FaqI	GGGAC	2 cut(s)	440, 1676
FatI	CATG	8 cut(s)	36, 220, 716, 807, 1048, 1732, 2041, 2187
FauI	CCCGC	6 cut(s)	22, 214, 245, 376, 501, 1007
FbaI	TGATCA	1 cut(s)	1630
FspBI	CTAG	1 cut(s)	122
FspI	TGCGCA	1 cut(s)	1884
GlaI	GCGC	1 cut(s)	1884
GsaI	CCCAGC	4 cut(s)	319, 508, 1644, 2280
HapII	CCGG	4 cut(s)	547, 562, 587, 792
HgaI	GACGC	3 cut(s)	849, 1062, 1551
HhaI	GCGC	1 cut(s)	1885
Hin1I	GRCGYC	1 cut(s)	1562
Hin1II	CATG	8 cut(s)	40, 224, 720, 811, 1052, 1736, 2045, 2191
Hin6I	GCGC	1 cut(s)	1883
HinP1I	GCGC	1 cut(s)	1883
HincII	GTYRAC	1 cut(s)	544
HindII	GTYRAC	1 cut(s)	544
HindIII	AAGCTT	2 cut(s)	323, 572
HinfI	GANTC	7 cut(s)	454, 659, 925, 1829, 2053, 2236, 2408
HpaII	CCGG	4 cut(s)	547, 562, 587, 792
HphI	GGTGA	6 cut(s)	601, 922, 1517, 1640, 1832, 1972
Hpy166II	GTNNAC	5 cut(s)	436, 544, 1355, 2036, 2126
Hpy188I	TCNGA	6 cut(s)	88, 196, 330, 453, 655, 2134
Hpy188III	TCNNGA	6 cut(s)	26, 134, 380, 1240, 1255, 1715
Hpy8I	GTNNAC	5 cut(s)	436, 544, 1355, 2036, 2126
Hpy99I	CGWCG	3 cut(s)	443, 865, 1567
HpyCH4IV	ACGT	3 cut(s)	438, 519, 2119
HpyF10VI	GCNNNNNNNGC	8 cut(s)	186, 400, 409, 557, 611, 623, 647, 1849
HpyF3I	CTNAG	8 cut(s)	477, 627, 750, 828, 930, 1607, 1869, 2324
HpySE526I	ACGT	3 cut(s)	438, 519, 2119
Hsp92I	GRCGYC	1 cut(s)	1562
Hsp92II	CATG	8 cut(s)	40, 224, 720, 811, 1052, 1736, 2045, 2191
HspAI	GCGC	1 cut(s)	1883
Ksp22I	TGATCA	1 cut(s)	1630
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	4 cut(s)	212, 448, 466, 1630
LguI	GCTCTTC	3 cut(s)	1062, 1305, 1986
LmnI	GCTCC	6 cut(s)	16, 631, 1261, 1504, 1840, 2419
Lsp1109I	GCAGC	8 cut(s)	184, 525, 623, 626, 634, 1378, 1861, 2008
LweI	GCATC	4 cut(s)	714, 949, 964, 1687
MaeI	CTAG	1 cut(s)	122
MaeII	ACGT	3 cut(s)	438, 519, 2119
MaeIII	GTNAC	6 cut(s)	851, 1820, 1929, 1941, 1967, 2327
MalI	GATC	4 cut(s)	214, 450, 468, 1632
MboI	GATC	4 cut(s)	212, 448, 466, 1630
MhlI	GDGCHC	4 cut(s)	369, 1074, 2119, 2186
MlsI	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
MluNI	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
MlyI	GAGTC	3 cut(s)	668, 919, 2230
MmeI	TCCRAC	2 cut(s)	172, 2331
Mox20I	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
Mph1103I	ATGCAT	1 cut(s)	1680
MscI	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
MseI	TTAA	7 cut(s)	482, 537, 942, 1389, 1536, 2081, 2262
MslI	CAYNNNNRTG	1 cut(s)	1737
Msp20I	TGGCCA	4 cut(s)	5, 1095, 1320, 1920
MspA1I	CMGCKG	5 cut(s)	17, 252, 508, 617, 1369
MspCI	CTTAAG	1 cut(s)	1535
MspI	CCGG	4 cut(s)	547, 562, 587, 792
MspR9I	CCNGG	6 cut(s)	548, 562, 563, 1317, 1683, 2160
Mva1269I	GAATGC	1 cut(s)	1680
MvaI	CCWGG	3 cut(s)	1317, 1683, 2160
MvnI	CGCG	3 cut(s)	252, 896, 1056
MwoI	GCNNNNNNNGC	8 cut(s)	186, 400, 409, 557, 611, 623, 647, 1849
NciI	CCSGG	3 cut(s)	548, 562, 563
NcoI	CCATGG	1 cut(s)	2187
NdeII	GATC	4 cut(s)	212, 448, 466, 1630
NlaIII	CATG	8 cut(s)	40, 224, 720, 811, 1052, 1736, 2045, 2191
NlaIV	GGNNCC	4 cut(s)	226, 633, 834, 902
NmeAIII	GCCGAG	1 cut(s)	753
NmuCI	GTSAC	2 cut(s)	1820, 1967
NsbI	TGCGCA	1 cut(s)	1884
NsiI	ATGCAT	1 cut(s)	1680
NspV	TTCGAA	1 cut(s)	278
PaeR7I	CTCGAG	1 cut(s)	1238
PceI	AGGCCT	1 cut(s)	1546
PciSI	GCTCTTC	3 cut(s)	1062, 1305, 1986
PcsI	WCGNNNNNNNCGW	1 cut(s)	2029
PctI	GAATGC	1 cut(s)	1680
PfeI	GAWTC	4 cut(s)	454, 1829, 2053, 2408
PflFI	GACNNNGTC	1 cut(s)	431
PflMI	CCANNNNNTGG	1 cut(s)	2047
PinAI	ACCGGT	1 cut(s)	586
PleI	GAGTC	3 cut(s)	667, 919, 2230
PpsI	GAGTC	3 cut(s)	667, 919, 2230
PpuMI	RGGWCCY	1 cut(s)	343
PshAI	GACNNNNGTC	1 cut(s)	1668
PshBI	ATTAAT	1 cut(s)	942
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	3 cut(s)	1315, 1681, 2158
PspFI	CCCAGC	4 cut(s)	315, 504, 1640, 2276
PspGI	CCWGG	3 cut(s)	1315, 1681, 2158
PspN4I	GGNNCC	4 cut(s)	226, 633, 834, 902
PspPI	GGNCC	8 cut(s)	313, 343, 549, 559, 564, 789, 832, 1793
PspPPI	RGGWCCY	1 cut(s)	343
PstI	CTGCAG	1 cut(s)	643
PstNI	CAGNNNCTG	2 cut(s)	647, 2411
PsyI	GACNNNGTC	1 cut(s)	431
RsaI	GTAC	1 cut(s)	2247
RsaNI	GTAC	1 cut(s)	2246
RseI	CAYNNNNRTG	1 cut(s)	1737
SacII	CCGCGG	1 cut(s)	253
SapI	GCTCTTC	3 cut(s)	1062, 1305, 1986
SaqAI	TTAA	7 cut(s)	482, 537, 942, 1389, 1536, 2081, 2262
Sau3AI	GATC	4 cut(s)	212, 448, 466, 1630
Sau96I	GGNCC	8 cut(s)	313, 343, 549, 559, 564, 789, 832, 1793
SchI	GAGTC	3 cut(s)	668, 919, 2230
ScrFI	CCNGG	6 cut(s)	548, 562, 563, 1317, 1683, 2160
SduI	GDGCHC	4 cut(s)	369, 1074, 2119, 2186
SfaNI	GCATC	4 cut(s)	714, 949, 964, 1687
SfcI	CTRYAG	3 cut(s)	639, 2068, 2146
SfiI	GGCCNNNNNGGCC	1 cut(s)	557
Sfr274I	CTCGAG	1 cut(s)	1238
Sfr303I	CCGCGG	1 cut(s)	253
SfuI	TTCGAA	1 cut(s)	278
SgrBI	CCGCGG	1 cut(s)	253
SinI	GGWCC	1 cut(s)	343
SlaI	CTCGAG	1 cut(s)	1238
SmaI	CCCGGG	1 cut(s)	563
SmiMI	CAYNNNNRTG	1 cut(s)	1737
SmlI	CTYRAG	5 cut(s)	132, 1238, 1535, 1715, 2027
SmoI	CTYRAG	5 cut(s)	132, 1238, 1535, 1715, 2027
SrfI	GCCCGGGC	1 cut(s)	563
SseBI	AGGCCT	1 cut(s)	1546
SspMI	CTAG	1 cut(s)	122
StuI	AGGCCT	1 cut(s)	1546
StyD4I	CCNGG	6 cut(s)	546, 560, 561, 1315, 1681, 2158
StyI	CCWWGG	4 cut(s)	1090, 1796, 1983, 2187
TaiI	ACGT	3 cut(s)	441, 522, 2122
TauI	GCSGC	5 cut(s)	252, 293, 296, 415, 1059
TfiI	GAWTC	4 cut(s)	454, 1829, 2053, 2408
Tru1I	TTAA	7 cut(s)	482, 537, 942, 1389, 1536, 2081, 2262
Tru9I	TTAA	7 cut(s)	482, 537, 942, 1389, 1536, 2081, 2262
TscAI	CASTG	4 cut(s)	13, 878, 1351, 1859
TseFI	GTSAC	2 cut(s)	1820, 1967
TseI	GCWGC	8 cut(s)	172, 513, 611, 614, 647, 1366, 1849, 1996
Tsp45I	GTSAC	2 cut(s)	1820, 1967
TspDTI	ATGAA	5 cut(s)	213, 796, 1461, 1568, 1749
TspGWI	ACGGA	1 cut(s)	2401
TspMI	CCCGGG	1 cut(s)	561
TspRI	CASTG	4 cut(s)	13, 878, 1351, 1859
Tth111I	GACNNNGTC	1 cut(s)	431
Van91I	CCANNNNNTGG	1 cut(s)	2047
Vha464I	CTTAAG	1 cut(s)	1535
VpaK11BI	GGWCC	1 cut(s)	343
VspI	ATTAAT	1 cut(s)	942
XapI	RAATTY	2 cut(s)	200, 2291
XhoI	CTCGAG	1 cut(s)	1238
XmaI	CCCGGG	1 cut(s)	561
XspI	CTAG	1 cut(s)	122
Zsp2I	ATGCAT	1 cut(s)	1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.