Rh5DG364400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0002771
Physical Location & Seq
Reverse (-)
54572564 .. 54576734
4171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG364400.1

Sequence Viewer

Length: 2427 bp
ATGGAGCAAAACCCTCTTCAATCCGACGGCCCAGATGGCCTTCCCGTCAAGTCCACGACCCTCATAACCTTCTCCCGCAGAGGCCGAAGGGGGAATCCTAAAGCTGCTCAGCAGAGACTTGAAATCCTCAGAAAAACCCTAAACCCAATTCCCTTTGTGCCCGCCAAAAACCCGAACTTGCAGCGCCATCAGGAGCTCCTGAAGCGGCTGGGCCTCTGGGACTTTCTCCACATCCAGTTTGATCCGACTGTTCGGGCTGATCTTATTGCTGAGTTGATCGTTAACTATAGCCCTCAGCGGCGGTGCAGCTACGTCGGTGAGGTCCGGATTAGGGTCAGCCCTGCCGATCTGGGACGCGCATTGAAGCTTCCGGTTGGGGTGAAATCGAAGAAGAGTGTGGTTGCAGAGGCTCCGGCGGCGGCGGCGGCGGCGTCGGAGGAATCGATAGCTTTGGTTGAGGATTTGGTAGGCAATTGGGTGTTTGTGCAGGAGGATGAGATGCCCAGGGAGGTTTTGAAGGATATCAAAGAAGGGGAGTTTGGGAATGTGGATTGGGCTGGTTTGATTTGGTTCATGGTGGAAAAGGAGTTGCTTAAGGGTCTACAGTTGGGGGATTGTTACTATGCATCGCATTTGCAGTTATTGATAAAATCTCAGTGCGAGAGTTTGTTTTCGGAGAAGGGACAAGGGTCTAGGGTGGAGATTGAGTTGAAGGAGGATGGTATAATGGGTGGGGAGGATGATTTTCAGGGAGGCAGATTGGAGGAACACGGTATTAAACTATGTCTTGGGGAAGAAAATGTGGAGAAATGTTATGTTGAGCAAGACAATGTGGAGAAAGTTTATGTTGAGCAAGACAATGTTGAGAAAGTTGATGATGAGCAAGAAAATGTTGAGAAATTTAATAATGAGCAGGAACATGATGTTGAGCGAGAAAATGTGGAGGAACTTGATGTTGAGCAAGAAAATGTGGAGGAAGTTGATGTTGAGCAGGAAAATGTTGAGAAATTTAATATTGAGCAGGAACATGTGGAGGAAGTTGATGTTGAGCAAGAAAATGTTGAGAAATTTAATATTGAGCAGGAAAATGTGGAGGAACTTGATGTTGAGCAGGAAAATGTGGAGGAACTTGATGTTGAGCAGGAAAATGTTGAGAAATTTAATATTGAGCAGGAAAATGTGGAGGAACTTGATGTTGAGCAGGAACATGTGGAGGAACTTGATGTTGAGCAAGAAAATGTGGAGAAAGTTATAGGTGAAAGGGTGCTAGTTGAGGTTGAGGATGAGGATGAGGATGTAATGGATGTCGAAGAATTTAAGGAGGAAGAGCCTACCCAATGGCTTTTGGCTGGGAAGGGAAATTTAAGAGGACCTTGTTTGCAGCGGTGCAATCTTCATGGGGCCGAGGATTTGGGTTGTGGGGATGAGAGAAAAAATTATATGGAGTTGGGAGAAGAAGAAGATGATGATGATGATGAAGAAGAGGAAGAGGATGATCAGGAGGGAGGCTTTGACCTTTCAATGAAGGGTTTTTCTTTGGAGGGGTTGTCTTCAGGAAGTCTTATGCAGGTCATGGAAGGGGGCCATATCCCTCTTGGCTCTGGTATGCCACTGCATGATCATTTGGCCACAGATTTTCCTTCGTCAAGGTGGGACCTAATGCTTCCTGGAAGTTCCTCACTTTCTGGTAATGGTCACAAGAGAGAGTTCAGCCATGAAAATGATAATTCTCATCATGGTCTCGATGGTAATAAGAGGTTGAGGACTGATGGCCCTTGGCATAGTAAGATGCCGGGTGACTTTGACGTGTGTATGGAGCATATACAGCAGTGGATGGGGAAAATGGAGGATATACAACACTGGATGGGGAAAGCTAGGATAATGTATGCGGCAAAAGAACAGGAGTGTGAAGATGCTAAAATGAAGCAGCAGCTTTTACTGGTAGAGTTGCAGAAAAGGGATGAGTTCATCGATCAGTTGCACAAGGCCAGGACCGAAGACCAGCAGAAGAGACAAACTGAGAAGTATAGGTTTGAGCATGAGGTTTATTTGATGCAAAATCTCTTGAATGGCTATAGGAAGGCTTTAAAGGCAACACAAAAGGCATTTGCTGAATATAAAGCACGCAGTCCACAGGCTGATGAGCCACTCTATAGAGATGTTCCTGGTTCTGGGGGTCTTGTTTTAAGCACTCGAGAACTCGAAAAGCTTCGCTTAAAACAAGAAGAAGAAGAGAGGATGAGGTGTCTGGTGATTGAAACAAAAATTAAGGACTTTGAAGCTGGGTGGATTAGCAAATTTGAAGCACACCACAAGAGTGTTGAAGTAGTGAGTAATAGGTTGTTGGGTTTGGAGAAGGAAGTGAAACTTCTCAATGAACAGCTTACAAAACAGAGGCTTTCAGAGACACCAGAACACTCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

808

Amino Acids

92.93

Weight (kDa)

4.57

Isoelectric Point (pI)

57.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1558
AccI GTMKAC 1 cut(s) 601
AccII CGCG 1 cut(s) 357
AccIII TCCGGA 1 cut(s) 324
AclWI GGATC 1 cut(s) 236
AcoI YGGCCR 1 cut(s) 1626
AcsI RAATTY 7 cut(s) 899, 1007, 1067, 1157, 1313, 1360, 2297
AcuI CTGAAG 2 cut(s) 221, 1536
AcyI GRCGYC 1 cut(s) 431
AfiI CCNNNNNNNGG 2 cut(s) 331, 2171
AflII CTTAAG 1 cut(s) 593
AflIII ACRYGT 3 cut(s) 1027, 1207, 1806
AjiI CACGTC 1 cut(s) 1807
AjnI CCWGG 4 cut(s) 503, 1666, 1988, 2164
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AleI CACNNNNGTG 1 cut(s) 2316
Alw21I GWGCWC 1 cut(s) 198
Alw26I GTCTC 4 cut(s) 109, 1745, 2005, 2399
AlwI GGATC 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 2193
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 9 cut(s) 28, 37, 82, 211, 1401, 1582, 1626, 1771, 1986
ApeKI GCWGC 6 cut(s) 104, 181, 306, 1381, 1927, 1930
ApoI RAATTY 7 cut(s) 899, 1007, 1067, 1157, 1313, 1360, 2297
Asp700I GAANNNNTTC 1 cut(s) 2208
AspLEI GCGC 2 cut(s) 186, 359
AspS9I GGNCC 9 cut(s) 29, 211, 322, 1370, 1401, 1582, 1654, 1772, 1992
AsuC2I CCSGG 1 cut(s) 1794
AsuHPI GGTGA 5 cut(s) 329, 391, 1268, 1808, 2263
AvaI CYCGRG 1 cut(s) 2193
AvaII GGWCC 4 cut(s) 322, 1370, 1654, 1992
BaeGI GKGCMC 1 cut(s) 162
BalI TGGCCA 1 cut(s) 1628
BanII GRGCYC 1 cut(s) 198
BbsI GAAGAC 2 cut(s) 1542, 2004
Bbv12I GWGCWC 1 cut(s) 198
BbvCI CCTCAGC 1 cut(s) 294
BbvI GCAGC 6 cut(s) 91, 193, 318, 1393, 1939, 1942
BccI CCATC 7 cut(s) 29, 195, 713, 1739, 1763, 1828, 1858
BceAI ACGGC 1 cut(s) 43
BcgI CGANNNNNNTGC 2 cut(s) 295, 329
BciT130I CCWGG 4 cut(s) 505, 1668, 1990, 2166
BclI TGATCA 2 cut(s) 1495, 1618
BcnI CCSGG 1 cut(s) 1794
BcoDI GTCTC 4 cut(s) 109, 1745, 2005, 2399
BfaI CTAG 3 cut(s) 693, 1268, 1875
BfmI CTRYAG 4 cut(s) 286, 602, 2074, 2152
BfoI RGCGCY 1 cut(s) 187
BfrI CTTAAG 1 cut(s) 593
BfuAI ACCTGC 1 cut(s) 1558
BglI GCCNNNNNGGC 1 cut(s) 36
BlpI GCTNAGC 1 cut(s) 108
Bme1390I CCNGG 5 cut(s) 505, 1668, 1794, 1990, 2166
Bme18I GGWCC 4 cut(s) 322, 1370, 1654, 1992
BmeT110I CYCGRG 1 cut(s) 2193
BmgBI CACGTC 1 cut(s) 1807
BmgT120I GGNCC 9 cut(s) 29, 211, 322, 1370, 1401, 1582, 1654, 1772, 1992
BmiI GGNNCC 4 cut(s) 411, 1402, 1583, 1655
BmrFI CCNGG 5 cut(s) 505, 1668, 1794, 1990, 2166
BmsI GCATC 5 cut(s) 489, 635, 1779, 1903, 2043
BoxI GACNNNNGTC 1 cut(s) 688
BpiI GAAGAC 2 cut(s) 1542, 2004
Bpu10I CCTNAGC 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 108
BpuMI CCSGG 1 cut(s) 1794
Bsa29I ATCGAT 2 cut(s) 443, 1971
BsaHI GRCGYC 1 cut(s) 431
BsaI GGTCTC 1 cut(s) 1745
BsaJI CCNNGG 4 cut(s) 503, 504, 1404, 1775
BsaWI WCCGGW 2 cut(s) 324, 370
BsaXI ACNNNNNCTCC 4 cut(s) 692, 722, 1532, 1562
Bsc4I CCNNNNNNNGG 2 cut(s) 331, 2171
Bse1I ACTGG 3 cut(s) 235, 1865, 1944
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 4 cut(s) 505, 1668, 1990, 2166
BseCI ATCGAT 2 cut(s) 443, 1971
BseDI CCNNGG 4 cut(s) 503, 504, 1404, 1775
BseLI CCNNNNNNNGG 2 cut(s) 331, 2171
BseMII CTCAG 6 cut(s) 122, 142, 261, 308, 668, 2010
BseNI ACTGG 3 cut(s) 235, 1865, 1944
BseSI GKGCMC 1 cut(s) 162
BseXI GCAGC 6 cut(s) 91, 193, 318, 1393, 1939, 1942
BseYI CCCAGC 3 cut(s) 208, 1349, 2282
BsgI GTGCAG 2 cut(s) 325, 506
Bsh1236I CGCG 1 cut(s) 357
BshFI GGCC 9 cut(s) 30, 39, 84, 213, 1403, 1584, 1628, 1773, 1988
BshVI ATCGAT 2 cut(s) 443, 1971
BsiHKAI GWGCWC 1 cut(s) 198
BsiHKCI CYCGRG 1 cut(s) 2193
BsiSI CCGG 4 cut(s) 325, 371, 413, 1793
BslFI GGGAC 4 cut(s) 233, 366, 696, 1667
BslI CCNNNNNNNGG 2 cut(s) 331, 2171
BsmAI GTCTC 4 cut(s) 109, 1745, 2005, 2399
BsmFI GGGAC 4 cut(s) 233, 366, 696, 1667
BsnI GGCC 9 cut(s) 30, 39, 84, 213, 1403, 1584, 1628, 1773, 1988
Bso31I GGTCTC 1 cut(s) 1745
BsoBI CYCGRG 1 cut(s) 2193
Bsp1286I GDGCHC 2 cut(s) 162, 198
Bsp13I TCCGGA 1 cut(s) 324
Bsp143I GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
Bsp1720I GCTNAGC 1 cut(s) 108
BspANI GGCC 9 cut(s) 30, 39, 84, 213, 1403, 1584, 1628, 1773, 1988
BspCNI CTCAG 6 cut(s) 121, 141, 262, 307, 667, 2011
BspDI ATCGAT 2 cut(s) 443, 1971
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 1 cut(s) 357
BspLI GGNNCC 4 cut(s) 411, 1402, 1583, 1655
BspMI ACCTGC 1 cut(s) 1558
BspPI GGATC 1 cut(s) 236
BspQI GCTCTTC 1 cut(s) 1320
BspTI CTTAAG 1 cut(s) 593
BspTNI GGTCTC 1 cut(s) 1745
BsrI ACTGG 3 cut(s) 235, 1865, 1944
BssECI CCNNGG 4 cut(s) 503, 504, 1404, 1775
BssMI GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
BssNI GRCGYC 1 cut(s) 431
BssT1I CCWWGG 1 cut(s) 1775
Bst2UI CCWGG 4 cut(s) 505, 1668, 1990, 2166
Bst4CI ACNGT 3 cut(s) 250, 606, 773
Bst6I CTCTTC 7 cut(s) 21, 386, 1320, 1476, 1482, 2003, 2226
BstACI GRCGYC 1 cut(s) 431
BstAFI CTTAAG 1 cut(s) 593
BstC8I GCNNGC 2 cut(s) 162, 2125
BstDEI CTNAG 6 cut(s) 108, 128, 270, 294, 654, 2019
BstFNI CGCG 1 cut(s) 357
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 2 cut(s) 186, 359
BstKTI GATC 7 cut(s) 244, 262, 279, 349, 1498, 1621, 1975
BstMAI GTCTC 4 cut(s) 109, 1745, 2005, 2399
BstMBI GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
BstMWI GCNNNNNNNGC 8 cut(s) 36, 202, 416, 422, 425, 428, 1825, 2090
BstNI CCWGG 4 cut(s) 505, 1668, 1990, 2166
BstNSI RCATGY 2 cut(s) 1031, 1211
BstPAI GACNNNNGTC 1 cut(s) 688
BstSCI CCNGG 5 cut(s) 503, 1666, 1792, 1988, 2164
BstSFI CTRYAG 4 cut(s) 286, 602, 2074, 2152
BstSLI GKGCMC 1 cut(s) 162
BstUI CGCG 1 cut(s) 357
BstV1I GCAGC 6 cut(s) 91, 193, 318, 1393, 1939, 1942
BstV2I GAAGAC 2 cut(s) 1542, 2004
Bsu15I ATCGAT 2 cut(s) 443, 1971
BsuRI GGCC 9 cut(s) 30, 39, 84, 213, 1403, 1584, 1628, 1773, 1988
BsuTUI ATCGAT 2 cut(s) 443, 1971
BtgZI GCGATG 1 cut(s) 612
BtrI CACGTC 1 cut(s) 1807
BtsI GCAGTG 2 cut(s) 1610, 1835
BtsIMutI CAGTG 4 cut(s) 662, 1610, 1835, 1858
BveI ACCTGC 1 cut(s) 1558
Cac8I GCNNGC 2 cut(s) 162, 2125
CfoI GCGC 2 cut(s) 186, 359
Cfr13I GGNCC 9 cut(s) 29, 211, 322, 1370, 1401, 1582, 1654, 1772, 1992
ClaI ATCGAT 2 cut(s) 443, 1971
CseI GACGC 2 cut(s) 363, 420
DdeI CTNAG 6 cut(s) 108, 128, 270, 294, 654, 2019
DpnI GATC 7 cut(s) 243, 261, 278, 348, 1497, 1620, 1974
DpnII GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
DraI TTTAAA 1 cut(s) 2088
EaeI YGGCCR 1 cut(s) 1626
Eam1104I CTCTTC 7 cut(s) 21, 386, 1320, 1476, 1482, 2003, 2226
EarI CTCTTC 7 cut(s) 21, 386, 1320, 1476, 1482, 2003, 2226
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 1 cut(s) 1775
Eco24I GRGCYC 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 1745
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 4 cut(s) 322, 1370, 1654, 1992
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 2 cut(s) 221, 1536
Eco88I CYCGRG 1 cut(s) 2193
EcoICRI GAGCTC 1 cut(s) 196
EcoO109I RGGNCCY 2 cut(s) 1370, 1654
EcoRII CCWGG 4 cut(s) 503, 1666, 1988, 2164
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 1775
EcoT22I ATGCAT 1 cut(s) 628
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 1 cut(s) 1775
FalI AAGNNNNNCTT 6 cut(s) 1357, 1389, 2198, 2230, 2352, 2384
FaqI GGGAC 4 cut(s) 233, 366, 696, 1667
FauI CCCGC 2 cut(s) 83, 169
FbaI TGATCA 2 cut(s) 1495, 1618
FblI GTMKAC 1 cut(s) 601
FriOI GRGCYC 1 cut(s) 198
FspBI CTAG 3 cut(s) 693, 1268, 1875
GlaI GCGC 2 cut(s) 185, 358
GsaI CCCAGC 3 cut(s) 212, 1353, 2286
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 9 cut(s) 30, 39, 84, 213, 1403, 1584, 1628, 1773, 1988
HapII CCGG 4 cut(s) 325, 371, 413, 1793
HgaI GACGC 2 cut(s) 363, 420
HhaI GCGC 2 cut(s) 186, 359
Hin1I GRCGYC 1 cut(s) 431
Hin6I GCGC 2 cut(s) 184, 357
HinP1I GCGC 2 cut(s) 184, 357
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 2 cut(s) 365, 2207
HinfI GANTC 2 cut(s) 94, 440
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 4 cut(s) 325, 371, 413, 1793
HphI GGTGA 5 cut(s) 329, 391, 1268, 1808, 2263
Hpy166II GTNNAC 4 cut(s) 54, 283, 602, 2132
Hpy188I TCNGA 6 cut(s) 25, 131, 246, 436, 676, 2404
Hpy188III TCNNGA 8 cut(s) 191, 199, 325, 1499, 1554, 1742, 2065, 2195
Hpy8I GTNNAC 4 cut(s) 54, 283, 602, 2132
Hpy99I CGWCG 3 cut(s) 29, 317, 436
HpyCH4III ACNGT 3 cut(s) 250, 606, 773
HpyCH4IV ACGT 2 cut(s) 312, 1806
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 202, 416, 422, 425, 428, 1825, 2090
HpyF3I CTNAG 6 cut(s) 108, 128, 270, 294, 654, 2019
HpySE526I ACGT 2 cut(s) 312, 1806
Hsp92I GRCGYC 1 cut(s) 431
HspAI GCGC 2 cut(s) 184, 357
Kpn2I TCCGGA 1 cut(s) 324
Ksp22I TGATCA 2 cut(s) 1495, 1618
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 5 cut(s) 4, 193, 201, 415, 1816
Lsp1109I GCAGC 6 cut(s) 91, 193, 318, 1393, 1939, 1942
LweI GCATC 5 cut(s) 489, 635, 1779, 1903, 2043
MaeI CTAG 3 cut(s) 693, 1268, 1875
MaeII ACGT 2 cut(s) 312, 1806
MaeIII GTNAC 3 cut(s) 617, 1694, 1796
MalI GATC 7 cut(s) 243, 261, 278, 348, 1497, 1620, 1974
MboI GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
MfeI CAATTG 1 cut(s) 472
MhlI GDGCHC 2 cut(s) 162, 198
MlsI TGGCCA 1 cut(s) 1628
MluNI TGGCCA 1 cut(s) 1628
MmeI TCCRAC 3 cut(s) 48, 269, 414
Mox20I TGGCCA 1 cut(s) 1628
Mph1103I ATGCAT 1 cut(s) 628
MroI TCCGGA 1 cut(s) 324
MroXI GAANNNNTTC 1 cut(s) 2208
MscI TGGCCA 1 cut(s) 1628
MslI CAYNNNNRTG 2 cut(s) 1719, 2316
Msp20I TGGCCA 1 cut(s) 1628
MspA1I CMGCKG 2 cut(s) 298, 1384
MspCI CTTAAG 1 cut(s) 593
MspI CCGG 4 cut(s) 325, 371, 413, 1793
MspR9I CCNGG 5 cut(s) 505, 1668, 1794, 1990, 2166
MunI CAATTG 1 cut(s) 472
MvaI CCWGG 4 cut(s) 505, 1668, 1990, 2166
MvnI CGCG 1 cut(s) 357
MwoI GCNNNNNNNGC 8 cut(s) 36, 202, 416, 422, 425, 428, 1825, 2090
NciI CCSGG 1 cut(s) 1794
NdeII GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
NlaIV GGNNCC 4 cut(s) 411, 1402, 1583, 1655
NmeAIII GCCGAG 1 cut(s) 1429
NmuCI GTSAC 2 cut(s) 1694, 1796
NsiI ATGCAT 1 cut(s) 628
NspI RCATGY 2 cut(s) 1031, 1211
OliI CACNNNNGTG 1 cut(s) 2316
PaeR7I CTCGAG 1 cut(s) 2193
PasI CCCWGGG 1 cut(s) 504
PciI ACATGT 2 cut(s) 1027, 1207
PciSI GCTCTTC 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 440
PdmI GAANNNNTTC 1 cut(s) 2208
PfeI GAWTC 2 cut(s) 94, 440
PfoI TCCNGGA 1 cut(s) 1666
PpuMI RGGWCCY 2 cut(s) 1370, 1654
PscI ACATGT 2 cut(s) 1027, 1207
PshAI GACNNNNGTC 1 cut(s) 688
Psp124BI GAGCTC 1 cut(s) 198
Psp5II RGGWCCY 2 cut(s) 1370, 1654
Psp6I CCWGG 4 cut(s) 503, 1666, 1988, 2164
PspFI CCCAGC 3 cut(s) 208, 1349, 2282
PspGI CCWGG 4 cut(s) 503, 1666, 1988, 2164
PspN4I GGNNCC 4 cut(s) 411, 1402, 1583, 1655
PspPI GGNCC 9 cut(s) 29, 211, 322, 1370, 1401, 1582, 1654, 1772, 1992
PspPPI RGGWCCY 2 cut(s) 1370, 1654
RseI CAYNNNNRTG 2 cut(s) 1719, 2316
SacI GAGCTC 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 1320
Sau3AI GATC 7 cut(s) 241, 259, 276, 346, 1495, 1618, 1972
Sau96I GGNCC 9 cut(s) 29, 211, 322, 1370, 1401, 1582, 1654, 1772, 1992
ScrFI CCNGG 5 cut(s) 505, 1668, 1794, 1990, 2166
SduI GDGCHC 2 cut(s) 162, 198
SfaNI GCATC 5 cut(s) 489, 635, 1779, 1903, 2043
SfcI CTRYAG 4 cut(s) 286, 602, 2074, 2152
SfiI GGCCNNNNNGGCC 1 cut(s) 36
Sfr274I CTCGAG 1 cut(s) 2193
SinI GGWCC 4 cut(s) 322, 1370, 1654, 1992
SlaI CTCGAG 1 cut(s) 2193
SmiMI CAYNNNNRTG 2 cut(s) 1719, 2316
SmlI CTYRAG 2 cut(s) 593, 2193
SmoI CTYRAG 2 cut(s) 593, 2193
SspI AATATT 3 cut(s) 1015, 1075, 1165
SspMI CTAG 3 cut(s) 693, 1268, 1875
SstI GAGCTC 1 cut(s) 198
StyD4I CCNGG 5 cut(s) 503, 1666, 1792, 1988, 2164
StyI CCWWGG 1 cut(s) 1775
TaaI ACNGT 3 cut(s) 250, 606, 773
TaiI ACGT 2 cut(s) 315, 1809
TaqI TCGA 7 cut(s) 386, 443, 1308, 1743, 1971, 2194, 2202
TaqII GACCGA 1 cut(s) 2009
TauI GCSGC 8 cut(s) 208, 301, 419, 422, 425, 428, 431, 1892
TfiI GAWTC 2 cut(s) 94, 440
TscAI CASTG 4 cut(s) 662, 1617, 1835, 1865
TseFI GTSAC 2 cut(s) 1694, 1796
TseI GCWGC 6 cut(s) 104, 181, 306, 1381, 1927, 1930
Tsp45I GTSAC 2 cut(s) 1694, 1796
TspDTI ATGAA 8 cut(s) 562, 1385, 1491, 1538, 1731, 1937, 1957, 2391
TspRI CASTG 4 cut(s) 662, 1617, 1835, 1865
Vha464I CTTAAG 1 cut(s) 593
VpaK11BI GGWCC 4 cut(s) 322, 1370, 1654, 1992
XapI RAATTY 7 cut(s) 899, 1007, 1067, 1157, 1313, 1360, 2297
XceI RCATGY 2 cut(s) 1031, 1211
XcmI CCANNNNNNNNNTGG 1 cut(s) 1592
XhoI CTCGAG 1 cut(s) 2193
XmiI GTMKAC 1 cut(s) 601
XmnI GAANNNNTTC 1 cut(s) 2208
XspI CTAG 3 cut(s) 693, 1268, 1875
Zsp2I ATGCAT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.