Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Reverse (-)

55148090 .. 55154611

Gene Structure 6522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG339900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGAGCAAAACCCTCTTCAATCCGACGGCCCAGATGGCCTTCCCGTCAGGTCCACGACCCTCATAACCTTCTCCCGCCGAGGCCGAAAGGGGACTCCTAAAGCTGCTCAGCAGAGACTTGAAATCCTCAGAAAAACCCTAAACCCAATTCCCTTTGTGCCCGCCAAAAACCCGAACTTGCAGCGCCATGAGGAGCTCCTGAAGCGGCTGGGCCTCTGGGACTTTCTCCACATCCAGTTTGATCCGACTGTTCGGGCTGATCTTATTGCTGAGTTGATCGTTAACTATAGCCCTCAGCGGCGGTGCAGCTACGTCGGTGAGGTCCGGATTAGGGTCAGCCCTGCCGATTTGGGACGCGCATTGAAGCTTCCGGTTGGGGTGAAATCGAAGAAGAGTGTGGAGGAGGCTCCGGCGGCGGCGTCGGAGGAATCGATAGCTTTGGTTGAGGATTTGGTAGGCAATTGGGTGCTTGTGCAGGAGGATGAGATGTGGATGATGCCCAGGGAGGTTTTGAAGGATATCAAAGAAGGGCAGTTTGGGAATGTGGATTGGGCTGGTTTGATTTGGTTCATGGTGGAAAAGGAGTTGCTTAAGGGTCTACAGATGGGGGATTGCTACTATGCATCGCATTTGCAGTTATTGATAAAATCTCAGTGCGAGAGTTTGTTTTCGGAGAAGGGACAAGGGTCTAGGGTGGAGATTGAGTTGAAGGAGGACGGGGAAGAGGATGGTGTAATGGGTGGGGGGGATGATTGTCAGGGAGGCAGATTGGAGGAGCACGGTATTAAACTATGTCTTGGGGAAGAAAATGAGGAGAAATGTTATAATGAGCAGGAACATGTGGAGAAAGTTGATGTTGAGCAAGAAAATGTTGAGAAAGTTGATGATGAGCAAGAAAATGTTGAGAAATTTAACAATGAGCAGGAACATGTGGAGGAACTTGATGTTGAGCAAGAAAATGTGGAGGAAGTTGATGTTGAGCAAGAAAATGTTGAGAAATTTAATATTGAGCAGGAAAATGTGGAGGAAGTTGATGTTGAGCAGGAAAATGTTGAGAAATTTAATATTGAGCAGGAAAATGTGGAGGAACTTGATGTTGACCAAGAAAATGTGGAGAAAGTTATAGGTGAAAGGGTGCTAGTTGAGGTTGAGGATGAGGATGAGGATGTAATGGATGTCGAAGAATTTAAGGAGGAAGAGCCTACCCAATGGCTTTTGGCTGGGAAGGGCAATTTAAGAGGACCTTGTTTGCAGCGGTGCAATCTTCATGGGATCGAGGATTTGGGTTGTGGGGATGAGAGAAAAAATTATATGGAGTTGGGAGAAGAAGAAGATGATGATGATGATGAAGAAGAGGAAGAGGATGATCAGGAGGGAGGCTTTGACCTCTCAATGAAGGGTTTTTCTTTGGAGGGGTTGTCTTCAGGAAGTCTTATGCAGGTCATGGAAGGGGGCCATATCCCTCTTGGCTCTGGTATGCCACTGCATGATCATTTGGCCACAGATTTTCCTTCGTCAAGGTGGGACCTAATGCTTCCTGGAAGTTCCTCACTTTCTGGTAATGGTCACAAGAGAGAGTTTAGCCATGAAAATGATAATTCTCATCATGGTCTCGATGGTAATAAGAGGTTGAGGACTGATGGCCCTTGGCATAGTAAGATGCCGGGTGACTTTGACGTGTGTATGGAGCATATACAGCAGTGGATGGGGAAAATGGAGGATATACAACAGTGGATGGGGAAAGCTAGGATAATGTATGCGGCAAAAGAACAGGAGTGTGAAGATGCTAAAATGAAGCAGCAGCTTTTACTGGTAGAGTTGCAGAAAAGGGATGAGTTCATCGAGCACTTGCACAAGGCCAGGACCGAAGACCAGCAGAAGAGACAAACTGAGAAGTATAGGTTTGAGCATGAGGTTTATTTGATGCAAAATCTCTTGAATGGCTATAGGAAGGCTTTAAAGGCAACACAAAAGGCATTTGCTGAATATAAAGCACGCAGTCCACAGGCTGATGAGCCACTCTATAGAGATGTTCCTGGTTCTGGGGGTCTTGTTTTAAGCACTCGAGAACTCGAAAAGCTTCGCTTAAAACAGGAAGAAGAAGAGAGGATGAGGTGTCTGGTCATAGAAACAAAAATTAAGGACTTTGAAGCTGGGTGGATTAGCAAATTTGAAGCACACCACAAGAGTGTTGAAGTAGTGAGTAATAGGTTGTTGGGTTTGGAGAAGGAAGTGAAACTTCTCAATGAACAGCTTACAAAACAGAGGCTTTCAGAGACACCAGAACACTCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

765

Amino Acids

87.91

Weight (kDa)

4.65

Isoelectric Point (pI)

58.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	825
Acc36I	ACCTGC	1 cut(s)	1429
AccI	GTMKAC	1 cut(s)	598
AccII	CGCG	1 cut(s)	357
AccIII	TCCGGA	1 cut(s)	324
AciI	CCGC	9 cut(s)	76, 162, 205, 298, 301, 413, 416, 1255, 1760
AclWI	GGATC	2 cut(s)	236, 1280
AcoI	YGGCCR	1 cut(s)	1497
AcsI	RAATTY	5 cut(s)	908, 998, 1058, 1184, 2168
AcuI	CTGAAG	2 cut(s)	221, 1407
AcyI	GRCGYC	1 cut(s)	419
AfiI	CCNNNNNNNGG	2 cut(s)	331, 2042
AflII	CTTAAG	1 cut(s)	590
AflIII	ACRYGT	3 cut(s)	838, 928, 1677
AgsI	TTSAA	9 cut(s)	20, 122, 364, 514, 709, 1939, 2150, 2174, 2195
AjiI	CACGTC	1 cut(s)	1678
AjnI	CCWGG	4 cut(s)	500, 1537, 1859, 2035
AjuI	GAANNNNNNNTTGG	2 cut(s)	519, 551
AleI	CACNNNNGTG	1 cut(s)	2187
Alw21I	GWGCWC	3 cut(s)	198, 780, 1848
Alw26I	GTCTC	4 cut(s)	109, 1616, 1876, 2270
AlwI	GGATC	2 cut(s)	236, 1280
Ama87I	CYCGRG	1 cut(s)	2064
Aor13HI	TCCGGA	1 cut(s)	324
AoxI	GGCC	8 cut(s)	28, 37, 82, 211, 1453, 1497, 1642, 1857
ApeKI	GCWGC	6 cut(s)	104, 181, 306, 1252, 1798, 1801
ApoI	RAATTY	5 cut(s)	908, 998, 1058, 1184, 2168
Asp700I	GAANNNNTTC	1 cut(s)	2079
AspLEI	GCGC	2 cut(s)	186, 359
AspS9I	GGNCC	9 cut(s)	29, 51, 211, 322, 1241, 1453, 1525, 1643, 1863
AsuC2I	CCSGG	1 cut(s)	1665
AsuHPI	GGTGA	4 cut(s)	329, 391, 1139, 1679
AvaI	CYCGRG	1 cut(s)	2064
AvaII	GGWCC	5 cut(s)	51, 322, 1241, 1525, 1863
BaeGI	GKGCMC	1 cut(s)	162
BalI	TGGCCA	1 cut(s)	1499
BanII	GRGCYC	1 cut(s)	198
BbsI	GAAGAC	2 cut(s)	1413, 1875
Bbv12I	GWGCWC	3 cut(s)	198, 780, 1848
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	6 cut(s)	91, 193, 318, 1264, 1810, 1813
BccI	CCATC	7 cut(s)	29, 598, 722, 1610, 1634, 1699, 1729
BceAI	ACGGC	1 cut(s)	43
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BciT130I	CCWGG	4 cut(s)	502, 1539, 1861, 2037
BclI	TGATCA	2 cut(s)	1366, 1489
BcnI	CCSGG	1 cut(s)	1665
BcoDI	GTCTC	4 cut(s)	109, 1616, 1876, 2270
BfaI	CTAG	3 cut(s)	690, 1139, 1746
BfmI	CTRYAG	4 cut(s)	286, 599, 1945, 2023
BfoI	RGCGCY	1 cut(s)	187
BfrI	CTTAAG	1 cut(s)	590
BfuAI	ACCTGC	1 cut(s)	1429
BglI	GCCNNNNNGGC	1 cut(s)	36
BlpI	GCTNAGC	1 cut(s)	108
Bme1390I	CCNGG	5 cut(s)	502, 1539, 1665, 1861, 2037
Bme18I	GGWCC	5 cut(s)	51, 322, 1241, 1525, 1863
BmeT110I	CYCGRG	1 cut(s)	2064
BmgBI	CACGTC	1 cut(s)	1678
BmgT120I	GGNCC	9 cut(s)	29, 51, 211, 322, 1241, 1453, 1525, 1643, 1863
BmiI	GGNNCC	3 cut(s)	408, 1454, 1526
BmrFI	CCNGG	5 cut(s)	502, 1539, 1665, 1861, 2037
BmsI	GCATC	5 cut(s)	486, 632, 1650, 1774, 1914
BoxI	GACNNNNGTC	1 cut(s)	685
BpiI	GAAGAC	2 cut(s)	1413, 1875
Bpu10I	CCTNAGC	1 cut(s)	294
Bpu1102I	GCTNAGC	1 cut(s)	108
BpuMI	CCSGG	1 cut(s)	1665
Bsa29I	ATCGAT	1 cut(s)	431
BsaHI	GRCGYC	1 cut(s)	419
BsaI	GGTCTC	1 cut(s)	1616
BsaJI	CCNNGG	4 cut(s)	79, 500, 501, 1646
BsaWI	WCCGGW	2 cut(s)	324, 370
BsaXI	ACNNNNNCTCC	4 cut(s)	689, 719, 1403, 1433
Bsc4I	CCNNNNNNNGG	2 cut(s)	331, 2042
Bse1I	ACTGG	2 cut(s)	235, 1815
BseAI	TCCGGA	1 cut(s)	324
BseBI	CCWGG	4 cut(s)	502, 1539, 1861, 2037
BseCI	ATCGAT	1 cut(s)	431
BseDI	CCNNGG	4 cut(s)	79, 500, 501, 1646
BseLI	CCNNNNNNNGG	2 cut(s)	331, 2042
BseMII	CTCAG	6 cut(s)	122, 142, 261, 308, 665, 1881
BseNI	ACTGG	2 cut(s)	235, 1815
BseRI	GAGGAG	4 cut(s)	206, 416, 788, 827
BseSI	GKGCMC	1 cut(s)	162
BseXI	GCAGC	6 cut(s)	91, 193, 318, 1264, 1810, 1813
BseYI	CCCAGC	3 cut(s)	208, 1220, 2153
BsgI	GTGCAG	2 cut(s)	325, 494
Bsh1236I	CGCG	1 cut(s)	357
BshFI	GGCC	8 cut(s)	30, 39, 84, 213, 1455, 1499, 1644, 1859
BshVI	ATCGAT	1 cut(s)	431
BsiHKAI	GWGCWC	3 cut(s)	198, 780, 1848
BsiHKCI	CYCGRG	1 cut(s)	2064
BsiSI	CCGG	4 cut(s)	325, 371, 410, 1664
BslFI	GGGAC	5 cut(s)	106, 233, 366, 693, 1538
BslI	CCNNNNNNNGG	2 cut(s)	331, 2042
BsmAI	GTCTC	4 cut(s)	109, 1616, 1876, 2270
BsmFI	GGGAC	5 cut(s)	106, 233, 366, 693, 1538
BsnI	GGCC	8 cut(s)	30, 39, 84, 213, 1455, 1499, 1644, 1859
Bso31I	GGTCTC	1 cut(s)	1616
BsoBI	CYCGRG	1 cut(s)	2064
Bsp1286I	GDGCHC	4 cut(s)	162, 198, 780, 1848
Bsp13I	TCCGGA	1 cut(s)	324
Bsp143I	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
Bsp1720I	GCTNAGC	1 cut(s)	108
BspACI	CCGC	9 cut(s)	76, 162, 205, 298, 301, 413, 416, 1255, 1760
BspANI	GGCC	8 cut(s)	30, 39, 84, 213, 1455, 1499, 1644, 1859
BspCNI	CTCAG	6 cut(s)	121, 141, 262, 307, 664, 1882
BspDI	ATCGAT	1 cut(s)	431
BspEI	TCCGGA	1 cut(s)	324
BspFNI	CGCG	1 cut(s)	357
BspLI	GGNNCC	3 cut(s)	408, 1454, 1526
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	2 cut(s)	236, 1280
BspQI	GCTCTTC	1 cut(s)	1191
BspTI	CTTAAG	1 cut(s)	590
BspTNI	GGTCTC	1 cut(s)	1616
BsrI	ACTGG	2 cut(s)	235, 1815
BssECI	CCNNGG	4 cut(s)	79, 500, 501, 1646
BssMI	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
BssNI	GRCGYC	1 cut(s)	419
BssT1I	CCWWGG	1 cut(s)	1646
Bst2UI	CCWGG	4 cut(s)	502, 1539, 1861, 2037
Bst4CI	ACNGT	3 cut(s)	250, 782, 1731
Bst6I	CTCTTC	8 cut(s)	21, 386, 717, 1191, 1347, 1353, 1874, 2097
BstACI	GRCGYC	1 cut(s)	419
BstAFI	CTTAAG	1 cut(s)	590
BstC8I	GCNNGC	2 cut(s)	162, 1996
BstDEI	CTNAG	6 cut(s)	108, 128, 270, 294, 651, 1890
BstFNI	CGCG	1 cut(s)	357
BstH2I	RGCGCY	1 cut(s)	187
BstHHI	GCGC	2 cut(s)	186, 359
BstKTI	GATC	6 cut(s)	244, 262, 279, 1275, 1369, 1492
BstMAI	GTCTC	4 cut(s)	109, 1616, 1876, 2270
BstMBI	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
BstMWI	GCNNNNNNNGC	5 cut(s)	36, 202, 413, 1696, 1961
BstNI	CCWGG	4 cut(s)	502, 1539, 1861, 2037
BstNSI	RCATGY	2 cut(s)	842, 932
BstPAI	GACNNNNGTC	1 cut(s)	685
BstSCI	CCNGG	5 cut(s)	500, 1537, 1663, 1859, 2035
BstSFI	CTRYAG	4 cut(s)	286, 599, 1945, 2023
BstSLI	GKGCMC	1 cut(s)	162
BstUI	CGCG	1 cut(s)	357
BstV1I	GCAGC	6 cut(s)	91, 193, 318, 1264, 1810, 1813
BstV2I	GAAGAC	2 cut(s)	1413, 1875
Bsu15I	ATCGAT	1 cut(s)	431
BsuRI	GGCC	8 cut(s)	30, 39, 84, 213, 1455, 1499, 1644, 1859
BsuTUI	ATCGAT	1 cut(s)	431
BtgZI	GCGATG	1 cut(s)	609
BtrI	CACGTC	1 cut(s)	1678
BtsI	GCAGTG	2 cut(s)	1481, 1706
BtsIMutI	CAGTG	4 cut(s)	659, 1481, 1706, 1736
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	2 cut(s)	162, 1996
CfoI	GCGC	2 cut(s)	186, 359
Cfr13I	GGNCC	9 cut(s)	29, 51, 211, 322, 1241, 1453, 1525, 1643, 1863
ClaI	ATCGAT	1 cut(s)	431
CseI	GACGC	2 cut(s)	363, 408
DdeI	CTNAG	6 cut(s)	108, 128, 270, 294, 651, 1890
DpnI	GATC	6 cut(s)	243, 261, 278, 1274, 1368, 1491
DpnII	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
DraI	TTTAAA	1 cut(s)	1959
EaeI	YGGCCR	1 cut(s)	1497
Eam1104I	CTCTTC	8 cut(s)	21, 386, 717, 1191, 1347, 1353, 1874, 2097
EarI	CTCTTC	8 cut(s)	21, 386, 717, 1191, 1347, 1353, 1874, 2097
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	1 cut(s)	1646
Eco24I	GRGCYC	1 cut(s)	198
Eco31I	GGTCTC	1 cut(s)	1616
Eco32I	GATATC	1 cut(s)	520
Eco47I	GGWCC	5 cut(s)	51, 322, 1241, 1525, 1863
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	2 cut(s)	221, 1407
Eco88I	CYCGRG	1 cut(s)	2064
EcoICRI	GAGCTC	1 cut(s)	196
EcoO109I	RGGNCCY	2 cut(s)	1241, 1525
EcoRII	CCWGG	4 cut(s)	500, 1537, 1859, 2035
EcoRV	GATATC	1 cut(s)	520
EcoT14I	CCWWGG	1 cut(s)	1646
EcoT22I	ATGCAT	1 cut(s)	625
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	1 cut(s)	1646
FalI	AAGNNNNNCTT	6 cut(s)	1228, 1260, 2069, 2101, 2223, 2255
FaqI	GGGAC	5 cut(s)	106, 233, 366, 693, 1538
FauI	CCCGC	2 cut(s)	83, 169
FbaI	TGATCA	2 cut(s)	1366, 1489
FblI	GTMKAC	1 cut(s)	598
FriOI	GRGCYC	1 cut(s)	198
FspBI	CTAG	3 cut(s)	690, 1139, 1746
GlaI	GCGC	2 cut(s)	185, 358
GsaI	CCCAGC	3 cut(s)	212, 1224, 2157
HaeII	RGCGCY	1 cut(s)	187
HaeIII	GGCC	8 cut(s)	30, 39, 84, 213, 1455, 1499, 1644, 1859
HapII	CCGG	4 cut(s)	325, 371, 410, 1664
HgaI	GACGC	2 cut(s)	363, 408
HhaI	GCGC	2 cut(s)	186, 359
Hin1I	GRCGYC	1 cut(s)	419
Hin6I	GCGC	2 cut(s)	184, 357
HinP1I	GCGC	2 cut(s)	184, 357
HincII	GTYRAC	2 cut(s)	283, 1099
HindII	GTYRAC	2 cut(s)	283, 1099
HindIII	AAGCTT	2 cut(s)	365, 2078
HinfI	GANTC	2 cut(s)	94, 428
HpaI	GTTAAC	1 cut(s)	283
HpaII	CCGG	4 cut(s)	325, 371, 410, 1664
HphI	GGTGA	4 cut(s)	329, 391, 1139, 1679
Hpy166II	GTNNAC	5 cut(s)	54, 283, 599, 1099, 2003
Hpy188I	TCNGA	6 cut(s)	25, 131, 246, 424, 673, 2275
Hpy188III	TCNNGA	7 cut(s)	199, 325, 1370, 1425, 1613, 1936, 2066
Hpy8I	GTNNAC	5 cut(s)	54, 283, 599, 1099, 2003
Hpy99I	CGWCG	3 cut(s)	29, 317, 424
HpyCH4III	ACNGT	3 cut(s)	250, 782, 1731
HpyCH4IV	ACGT	2 cut(s)	312, 1677
HpyF10VI	GCNNNNNNNGC	5 cut(s)	36, 202, 413, 1696, 1961
HpyF3I	CTNAG	6 cut(s)	108, 128, 270, 294, 651, 1890
HpySE526I	ACGT	2 cut(s)	312, 1677
Hsp92I	GRCGYC	1 cut(s)	419
HspAI	GCGC	2 cut(s)	184, 357
Kpn2I	TCCGGA	1 cut(s)	324
Ksp22I	TGATCA	2 cut(s)	1366, 1489
KspAI	GTTAAC	1 cut(s)	283
Kzo9I	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
LguI	GCTCTTC	1 cut(s)	1191
LmnI	GCTCC	6 cut(s)	4, 193, 201, 412, 775, 1687
Lsp1109I	GCAGC	6 cut(s)	91, 193, 318, 1264, 1810, 1813
LweI	GCATC	5 cut(s)	486, 632, 1650, 1774, 1914
MaeI	CTAG	3 cut(s)	690, 1139, 1746
MaeII	ACGT	2 cut(s)	312, 1677
MaeIII	GTNAC	2 cut(s)	1565, 1667
MalI	GATC	6 cut(s)	243, 261, 278, 1274, 1368, 1491
MboI	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
MfeI	CAATTG	1 cut(s)	460
MhlI	GDGCHC	4 cut(s)	162, 198, 780, 1848
MlsI	TGGCCA	1 cut(s)	1499
MluNI	TGGCCA	1 cut(s)	1499
MlyI	GAGTC	1 cut(s)	88
MmeI	TCCRAC	3 cut(s)	48, 269, 402
Mox20I	TGGCCA	1 cut(s)	1499
Mph1103I	ATGCAT	1 cut(s)	625
MroI	TCCGGA	1 cut(s)	324
MroXI	GAANNNNTTC	1 cut(s)	2079
MscI	TGGCCA	1 cut(s)	1499
MslI	CAYNNNNRTG	2 cut(s)	1590, 2187
Msp20I	TGGCCA	1 cut(s)	1499
MspA1I	CMGCKG	2 cut(s)	298, 1255
MspCI	CTTAAG	1 cut(s)	590
MspI	CCGG	4 cut(s)	325, 371, 410, 1664
MspR9I	CCNGG	5 cut(s)	502, 1539, 1665, 1861, 2037
MunI	CAATTG	1 cut(s)	460
MvaI	CCWGG	4 cut(s)	502, 1539, 1861, 2037
MvnI	CGCG	1 cut(s)	357
MwoI	GCNNNNNNNGC	5 cut(s)	36, 202, 413, 1696, 1961
NciI	CCSGG	1 cut(s)	1665
NdeII	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
NlaIV	GGNNCC	3 cut(s)	408, 1454, 1526
NmeAIII	GCCGAG	1 cut(s)	104
NmuCI	GTSAC	2 cut(s)	1565, 1667
NsiI	ATGCAT	1 cut(s)	625
NspI	RCATGY	2 cut(s)	842, 932
OliI	CACNNNNGTG	1 cut(s)	2187
PaeR7I	CTCGAG	1 cut(s)	2064
PasI	CCCWGGG	1 cut(s)	501
PciI	ACATGT	2 cut(s)	838, 928
PciSI	GCTCTTC	1 cut(s)	1191
PcsI	WCGNNNNNNNCGW	1 cut(s)	428
PdmI	GAANNNNTTC	1 cut(s)	2079
PfeI	GAWTC	1 cut(s)	428
PfoI	TCCNGGA	1 cut(s)	1537
PleI	GAGTC	1 cut(s)	88
PpsI	GAGTC	1 cut(s)	88
PpuMI	RGGWCCY	2 cut(s)	1241, 1525
PscI	ACATGT	2 cut(s)	838, 928
PshAI	GACNNNNGTC	1 cut(s)	685
PsiI	TTATAA	1 cut(s)	825
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	2 cut(s)	1241, 1525
Psp6I	CCWGG	4 cut(s)	500, 1537, 1859, 2035
PspFI	CCCAGC	3 cut(s)	208, 1220, 2153
PspGI	CCWGG	4 cut(s)	500, 1537, 1859, 2035
PspN4I	GGNNCC	3 cut(s)	408, 1454, 1526
PspPI	GGNCC	9 cut(s)	29, 51, 211, 322, 1241, 1453, 1525, 1643, 1863
PspPPI	RGGWCCY	2 cut(s)	1241, 1525
RseI	CAYNNNNRTG	2 cut(s)	1590, 2187
SacI	GAGCTC	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	1191
Sau3AI	GATC	6 cut(s)	241, 259, 276, 1272, 1366, 1489
Sau96I	GGNCC	9 cut(s)	29, 51, 211, 322, 1241, 1453, 1525, 1643, 1863
SchI	GAGTC	1 cut(s)	88
ScrFI	CCNGG	5 cut(s)	502, 1539, 1665, 1861, 2037
SduI	GDGCHC	4 cut(s)	162, 198, 780, 1848
SfaNI	GCATC	5 cut(s)	486, 632, 1650, 1774, 1914
SfcI	CTRYAG	4 cut(s)	286, 599, 1945, 2023
SfiI	GGCCNNNNNGGCC	1 cut(s)	36
Sfr274I	CTCGAG	1 cut(s)	2064
SinI	GGWCC	5 cut(s)	51, 322, 1241, 1525, 1863
SlaI	CTCGAG	1 cut(s)	2064
SmiMI	CAYNNNNRTG	2 cut(s)	1590, 2187
SmlI	CTYRAG	2 cut(s)	590, 2064
SmoI	CTYRAG	2 cut(s)	590, 2064
SsiI	CCGC	9 cut(s)	76, 162, 205, 298, 301, 413, 416, 1255, 1760
SspI	AATATT	2 cut(s)	1006, 1066
SspMI	CTAG	3 cut(s)	690, 1139, 1746
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	5 cut(s)	500, 1537, 1663, 1859, 2035
StyI	CCWWGG	1 cut(s)	1646
TaaI	ACNGT	3 cut(s)	250, 782, 1731
TaiI	ACGT	2 cut(s)	315, 1680
TaqI	TCGA	8 cut(s)	386, 431, 1179, 1275, 1614, 1842, 2065, 2073
TaqII	GACCGA	1 cut(s)	1880
TauI	GCSGC	5 cut(s)	208, 301, 416, 419, 1763
TfiI	GAWTC	1 cut(s)	428
TscAI	CASTG	4 cut(s)	659, 1488, 1706, 1736
TseFI	GTSAC	2 cut(s)	1565, 1667
TseI	GCWGC	6 cut(s)	104, 181, 306, 1252, 1798, 1801
Tsp45I	GTSAC	2 cut(s)	1565, 1667
TspDTI	ATGAA	8 cut(s)	559, 1256, 1362, 1409, 1602, 1808, 1828, 2262
TspRI	CASTG	4 cut(s)	659, 1488, 1706, 1736
Vha464I	CTTAAG	1 cut(s)	590
VpaK11BI	GGWCC	5 cut(s)	51, 322, 1241, 1525, 1863
XapI	RAATTY	5 cut(s)	908, 998, 1058, 1184, 2168
XceI	RCATGY	2 cut(s)	842, 932
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1463
XhoI	CTCGAG	1 cut(s)	2064
XmiI	GTMKAC	1 cut(s)	598
XmnI	GAANNNNTTC	1 cut(s)	2079
XspI	CTAG	3 cut(s)	690, 1139, 1746
Zsp2I	ATGCAT	1 cut(s)	625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.