Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Reverse (-)

48424073 .. 48428813

Gene Structure 4741 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG334400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGACCCAAGTCGAAGGAGAGGAGGAGCCACAGAACCCTAATTCCCAATTTGAAACACTCACCCTACAACCCCCTCCACAACCACAAATGAAGCCTCAACCCGACTCAAACCAAGACAACCCCGACGCCTTCCCCGTCCGATCTCCCCGGAGCCGGACCGCCATAACCTTCGCTCGCAAGAAGCGCAAGAAGATGGGCAGGAATCCGAAAGCCTCTCAGAAGAAGCTGGAGATTCTGCGCCAAACCCTAAAGCCAATCCCCTTCGTCCCCGCCAAAACCCTAGACTTCGACAGCCACGAGGAGCTCCTCAAGCGGCTGGGCTTGTGGGACTTCGTCCACATCAAGTTCGATCGGAGCATTAGGGCTGACCTCCTCGCCCAATTGATCGTCAACTTCAACTCCCAGCAGCGGTGTAGCTACGTCAACGAGCTTAGGATTCTGGTTAACCGGTCCGATCTGGGACGCGCATTGAAGCTTCCGGTGATGCTCAAGTCCAAGAAGAGCGCCGTGGAGGATGCCGGCGAGGAGCAGCCGCCGGCGTCGGAGGAGTCGGTAGCTTTTCTGGAGGATTTGGTTTCGAATTGGATGCTTTTGCACGGGGATATGTGGATGATGCCCAGCGAGGTGTTGAGTTATACCAAAGCAATCAAAGAAGGTCAGTTTGGGAAGGTGGACTGGGCTGGTTTGGTTTGGTACATGGTGAATGAGGAGCTAGGTAAGGCCACGCAGTTGGAGAATTGTTACTATGCGTCGCATTTGCAGCATTTGATCAAGTCGCAGAAGGAGGATTTGTTTTCGGTGAAGCAAGAGTCGAAAGTGGAGATTGATTTGAAGGATGATGATGAGGAAGAAGAGGAAGAGGATGGTGGTGGGGATGTGAAAATGGATGATGTTCAGGGAGGCAGATTGGAGGAGAATGATATTAAGTTGTGTCTCGGGCAAGAAAATGTGACCAAAGTTGAGGTTGAGCACGAAAACTTGGAGAAAGTTGATGTTGAGCGAGAAGATGCGGAGAATGTTGATGATGAGCGAGAAGATGCGGAGAAAGTTGATGTTGGGAAAGAGAATGTGGAGAAAGAGGATGTCGGGCAAGAGAAGGTGGAGGAAGTTGAGGCTGAGCAAGAAAATGTAGAGAAAGTTGATTCTCAGCAAGGAAATGCGGAGAAAGTTGACATTGGAGAAGACAATGTTGAGAAAGTTTGTGGTGAAACAGAGCAGGTTGAGGTTGAGGATGAGGATGTGATGGATTTTGAAGAATTTAAGGAGGCAGAGCCTGCCCAATGGGTTTTGGCTGGGAAGGACAATCTAGGTGAGCCTTGTTTGCAGCGGTGTAATCTCGGTGGTATTAAGGATCTTGGTTGTGGGGATGAGAGAAATAAAAATATGGAGTTGGGAGAAGGAGTAGGTGAAGAAGAACAAGAAGATGATGAAATAGAAGAAGATGAAGAGGACGATGATGATCAGGAGGGTGGTTTCCACCTTTTGCCTAAAGGTTTTTCTTTAGAGGGGTTTCCTTCAGGAAATCTTACTCAGGGTATGGATGGTATGCCACTGCGTGATCATTTTGGCATAGAATTTCCTTCTCCAAGGGACCTAATGCTTCCCGGAAGTTCTTCCATTTATGGTAATGGTCCCAAGAGAGAGATTAACCATGAGAATGATAATTCTCACCATGGTCTCAATGGTAATAAGAGGTTGAGGACAGAAGGCTCATGGGATAGTAAAATGTCTGGTGACTTTGAGACAGGTATGGATCAAATACAGCAGTGGATGGGGAGAGTGGAGGATATGCAGCAGTGGATGGGAAAAGCTAGGATGATGTATGCAGCAAAAGAACAGGAGTGCCAACAAGCTGCAAATAACCAGCAGTATTTTATGCAAGAGTTGCAGAGAAGGGATGAGATGATTGAGCAGTTGCATAAGGCCAGGTTTGAAGACCAGCAAAAGTTTCAAACAGAGAAGTTTAGGTTTGAGCATGAGGTCCACTTGATGAAAAATCTCTTGGACGGCTATAGGAAAGCTTTAAAGGCAACACAAAAGGCATTTGCTGAACATAGAGCACATTGTCCACAGGCTGTTGAGCCACTCTACAGGGATGTTCCGGGATCCGGGGGCCTTGTTTTAAGCACCACAGAACTGGAAAAGCTACGCATAAAGCAAGAAGAAGAAGAGAGGATAAATAGACTGGCGATTGAAACGATGATTAAGGACTTTGAAGCTGGGTGGAGTAGTGAATATGAAGCACACCAAAAGAGTGTTGAATTAGCTAGTAGCAGGTTGATGGATGTTGAGAAGGAAGTGAAACTTCTCAAGGAAGGCCTTTTAAAACAGAGGCTTCCAGAAACACAAGAATCTCCAAATGAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

789

Amino Acids

90.37

Weight (kDa)

4.63

Isoelectric Point (pI)

54.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1207, 2265
AccII	CGCG	1 cut(s)	465
AciI	CCGC	9 cut(s)	159, 270, 313, 409, 533, 1010, 1040, 1160, 1327
AclWI	GGATC	4 cut(s)	1359, 1761, 2100, 2113
AcsI	RAATTY	2 cut(s)	1256, 1574
AcuI	CTGAAG	1 cut(s)	1500
AcyI	GRCGYC	2 cut(s)	126, 539
AdeI	CACNNNGTG	1 cut(s)	1556
AfaI	GTAC	1 cut(s)	695
AfiI	CCNNNNNNNGG	3 cut(s)	153, 408, 2108
AgeI	ACCGGT	1 cut(s)	447
AjnI	CCWGG	1 cut(s)	1925
AjuI	GAANNNNNNNTTGG	4 cut(s)	645, 677, 1985, 2017
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
Alw21I	GWGCWC	3 cut(s)	306, 972, 2062
Alw26I	GTCTC	3 cut(s)	938, 1682, 1736
AlwI	GGATC	4 cut(s)	1359, 1761, 2100, 2113
AlwNI	CAGNNNCTG	1 cut(s)	1274
Ama87I	CYCGRG	1 cut(s)	935
AoxI	GGCC	4 cut(s)	720, 1923, 2113, 2317
ApeKI	GCWGC	7 cut(s)	406, 529, 760, 1324, 1792, 1826, 1853
ApoI	RAATTY	2 cut(s)	1256, 1574
AsiGI	ACCGGT	1 cut(s)	447
Asp700I	GAANNNNTTC	1 cut(s)	1612
AspLEI	GCGC	4 cut(s)	186, 240, 467, 506
AspS9I	GGNCC	6 cut(s)	156, 450, 1591, 1631, 1981, 2113
AsuC2I	CCSGG	4 cut(s)	148, 1605, 2103, 2110
AsuHPI	GGTGA	9 cut(s)	52, 493, 712, 811, 1217, 1322, 1418, 1661, 1745
AsuII	TTCGAA	1 cut(s)	578
AvaI	CYCGRG	1 cut(s)	935
AvaII	GGWCC	5 cut(s)	156, 450, 1591, 1631, 1981
BamHI	GGATCC	1 cut(s)	2105
BanII	GRGCYC	1 cut(s)	306
BauI	CACGAG	1 cut(s)	296
BbsI	GAAGAC	2 cut(s)	1188, 1941
Bbv12I	GWGCWC	3 cut(s)	306, 972, 2062
BbvI	GCAGC	7 cut(s)	418, 541, 772, 1336, 1804, 1838, 1840
BccI	CCATC	7 cut(s)	187, 857, 1237, 1535, 1765, 1795, 2275
BceAI	ACGGC	2 cut(s)	491, 2023
BcgI	CGANNNNNNTGC	2 cut(s)	568, 602
BciT130I	CCWGG	1 cut(s)	1927
BclI	TGATCA	3 cut(s)	768, 1459, 1558
BcnI	CCSGG	4 cut(s)	148, 1605, 2103, 2110
BcoDI	GTCTC	3 cut(s)	938, 1682, 1736
BfaI	CTAG	5 cut(s)	281, 713, 1307, 1812, 2268
BfmI	CTRYAG	2 cut(s)	2011, 2089
BfoI	RGCGCY	1 cut(s)	507
BfuAI	ACCTGC	2 cut(s)	1207, 2265
BisI	GCNGC	9 cut(s)	314, 407, 530, 533, 761, 1325, 1793, 1827, 1854
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	9 cut(s)	315, 408, 531, 534, 762, 1326, 1794, 1828, 1855
Bme1390I	CCNGG	5 cut(s)	148, 1605, 1927, 2103, 2110
Bme18I	GGWCC	5 cut(s)	156, 450, 1591, 1631, 1981
BmeT110I	CYCGRG	1 cut(s)	935
BmgT120I	GGNCC	6 cut(s)	156, 450, 1591, 1631, 1981, 2113
BmiI	GGNNCC	6 cut(s)	27, 152, 1592, 1633, 2107, 2114
BmrFI	CCNGG	5 cut(s)	148, 1605, 1927, 2103, 2110
BmrI	ACTGGG	1 cut(s)	685
BmsI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
BmuI	ACTGGG	1 cut(s)	685
BoxI	GACNNNNGTC	1 cut(s)	8
BpiI	GAAGAC	2 cut(s)	1188, 1941
BpmI	CTGGAG	2 cut(s)	248, 584
Bpu10I	CCTNAGC	1 cut(s)	431
Bpu1102I	GCTNAGC	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	3 cut(s)	293, 473, 2294
BpuMI	CCSGG	4 cut(s)	148, 1605, 2103, 2110
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaHI	GRCGYC	2 cut(s)	126, 539
BsaI	GGTCTC	1 cut(s)	1682
BsaJI	CCNNGG	5 cut(s)	146, 507, 1586, 1672, 2109
BsaWI	WCCGGW	2 cut(s)	447, 478
BsaXI	ACNNNNNCTCC	6 cut(s)	383, 413, 776, 806, 1386, 1416
Bsc4I	CCNNNNNNNGG	3 cut(s)	153, 408, 2108
Bse118I	RCCGGY	3 cut(s)	447, 518, 535
Bse1I	ACTGG	3 cut(s)	680, 2142, 2190
Bse8I	GATNNNNATC	1 cut(s)	1458
BseBI	CCWGG	1 cut(s)	1927
BseDI	CCNNGG	5 cut(s)	146, 507, 1586, 1672, 2109
BseJI	GATNNNNATC	1 cut(s)	1458
BseLI	CCNNNNNNNGG	3 cut(s)	153, 408, 2108
BseMII	CTCAG	4 cut(s)	230, 1107, 1160, 1544
BseNI	ACTGG	3 cut(s)	680, 2142, 2190
BseRI	GAGGAG	9 cut(s)	35, 38, 296, 314, 362, 539, 560, 722, 926
BseXI	GCAGC	7 cut(s)	418, 541, 772, 1336, 1804, 1838, 1840
BseYI	CCCAGC	5 cut(s)	316, 402, 617, 1292, 2219
Bsh1236I	CGCG	1 cut(s)	465
Bsh1285I	CGRYCG	1 cut(s)	352
BshFI	GGCC	4 cut(s)	722, 1925, 2115, 2319
BshTI	ACCGGT	1 cut(s)	447
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	3 cut(s)	306, 972, 2062
BsiHKCI	CYCGRG	1 cut(s)	935
BsiSI	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1605, 2102, 2109
BslFI	GGGAC	5 cut(s)	251, 341, 474, 1604, 1617
BslI	CCNNNNNNNGG	3 cut(s)	153, 408, 2108
BsmAI	GTCTC	3 cut(s)	938, 1682, 1736
BsmFI	GGGAC	5 cut(s)	251, 341, 474, 1604, 1617
BsnI	GGCC	4 cut(s)	722, 1925, 2115, 2319
Bso31I	GGTCTC	1 cut(s)	1682
BsoBI	CYCGRG	1 cut(s)	935
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1286I	GDGCHC	3 cut(s)	306, 972, 2062
Bsp1720I	GCTNAGC	1 cut(s)	1116
Bsp19I	CCATGG	1 cut(s)	1672
BspACI	CCGC	9 cut(s)	159, 270, 313, 409, 533, 1010, 1040, 1160, 1327
BspANI	GGCC	4 cut(s)	722, 1925, 2115, 2319
BspCNI	CTCAG	4 cut(s)	229, 1108, 1159, 1543
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	2366
BspLI	GGNNCC	6 cut(s)	27, 152, 1592, 1633, 2107, 2114
BspMI	ACCTGC	2 cut(s)	1207, 2265
BspPI	GGATC	4 cut(s)	1359, 1761, 2100, 2113
BspQI	GCTCTTC	1 cut(s)	494
BspT104I	TTCGAA	1 cut(s)	578
BspTNI	GGTCTC	1 cut(s)	1682
BsrFI	RCCGGY	3 cut(s)	447, 518, 535
BsrI	ACTGG	3 cut(s)	680, 2142, 2190
BssAI	RCCGGY	3 cut(s)	447, 518, 535
BssECI	CCNNGG	5 cut(s)	146, 507, 1586, 1672, 2109
BssNI	GRCGYC	2 cut(s)	126, 539
BssSI	CACGAG	1 cut(s)	296
BssT1I	CCWWGG	2 cut(s)	1586, 1672
Bst2BI	CACGAG	1 cut(s)	296
Bst2UI	CCWGG	1 cut(s)	1927
Bst6I	CTCTTC	5 cut(s)	494, 846, 852, 1440, 2163
BstACI	GRCGYC	2 cut(s)	126, 539
BstAPI	GCANNNNNTGC	2 cut(s)	1274, 1885
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	4 cut(s)	175, 520, 537, 1275
BstDEI	CTNAG	5 cut(s)	216, 431, 1116, 1146, 1530
BstDSI	CCRYGG	2 cut(s)	507, 1672
BstFNI	CGCG	1 cut(s)	465
BstH2I	RGCGCY	1 cut(s)	507
BstHHI	GCGC	4 cut(s)	186, 240, 467, 506
BstMAI	GTCTC	3 cut(s)	938, 1682, 1736
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1885, 2027
BstNI	CCWGG	1 cut(s)	1927
BstPAI	GACNNNNGTC	1 cut(s)	8
BstSCI	CCNGG	5 cut(s)	146, 1603, 1925, 2101, 2108
BstSFI	CTRYAG	2 cut(s)	2011, 2089
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	7 cut(s)	418, 541, 772, 1336, 1804, 1838, 1840
BstV2I	GAAGAC	2 cut(s)	1188, 1941
BstX2I	RGATCY	2 cut(s)	1351, 2105
BstXI	CCANNNNNNTGG	2 cut(s)	730, 2137
BstYI	RGATCY	2 cut(s)	1351, 2105
BsuRI	GGCC	4 cut(s)	722, 1925, 2115, 2319
BtgI	CCRYGG	2 cut(s)	507, 1672
BtsI	GCAGTG	3 cut(s)	1550, 1772, 1802
BtsIMutI	CAGTG	3 cut(s)	1550, 1772, 1802
BveI	ACCTGC	2 cut(s)	1207, 2265
Cac8I	GCNNGC	4 cut(s)	175, 520, 537, 1275
CaiI	CAGNNNCTG	1 cut(s)	1274
CciI	TCATGA	1 cut(s)	2366
CfoI	GCGC	4 cut(s)	186, 240, 467, 506
Cfr10I	RCCGGY	3 cut(s)	447, 518, 535
Cfr13I	GGNCC	6 cut(s)	156, 450, 1591, 1631, 1981, 2113
CpoI	CGGWCCG	2 cut(s)	156, 450
CseI	GACGC	4 cut(s)	134, 471, 528, 738
Csp6I	GTAC	1 cut(s)	694
CspAI	ACCGGT	1 cut(s)	447
CspI	CGGWCCG	2 cut(s)	156, 450
CviAII	CATG	6 cut(s)	697, 1652, 1673, 1713, 1976, 2367
CviQI	GTAC	1 cut(s)	694
DdeI	CTNAG	5 cut(s)	216, 431, 1116, 1146, 1530
DraI	TTTAAA	2 cut(s)	2025, 2325
DraIII	CACNNNGTG	1 cut(s)	1556
Eam1104I	CTCTTC	5 cut(s)	494, 846, 852, 1440, 2163
EarI	CTCTTC	5 cut(s)	494, 846, 852, 1440, 2163
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	2 cut(s)	1586, 1672
Eco147I	AGGCCT	1 cut(s)	2319
Eco24I	GRGCYC	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	1682
Eco47I	GGWCC	5 cut(s)	156, 450, 1591, 1631, 1981
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	1 cut(s)	1500
Eco88I	CYCGRG	1 cut(s)	935
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	1591, 2113
EcoRII	CCWGG	1 cut(s)	1925
EcoT14I	CCWWGG	2 cut(s)	1586, 1672
EcoT38I	GRGCYC	1 cut(s)	306
ErhI	CCWWGG	2 cut(s)	1586, 1672
FaeI	CATG	6 cut(s)	700, 1655, 1676, 1716, 1979, 2370
FalI	AAGNNNNNCTT	2 cut(s)	2289, 2321
FaqI	GGGAC	5 cut(s)	251, 341, 474, 1604, 1617
FatI	CATG	6 cut(s)	696, 1651, 1672, 1712, 1975, 2366
FauI	CCCGC	1 cut(s)	277
FbaI	TGATCA	3 cut(s)	768, 1459, 1558
Fnu4HI	GCNGC	9 cut(s)	314, 407, 530, 533, 761, 1325, 1793, 1827, 1854
FriOI	GRGCYC	1 cut(s)	306
Fsp4HI	GCNGC	9 cut(s)	314, 407, 530, 533, 761, 1325, 1793, 1827, 1854
FspBI	CTAG	5 cut(s)	281, 713, 1307, 1812, 2268
GlaI	GCGC	4 cut(s)	185, 239, 466, 505
GluI	GCNGC	9 cut(s)	314, 407, 530, 533, 761, 1325, 1793, 1827, 1854
GsaI	CCCAGC	5 cut(s)	320, 406, 621, 1296, 2223
GsuI	CTGGAG	2 cut(s)	248, 584
HaeII	RGCGCY	1 cut(s)	507
HaeIII	GGCC	4 cut(s)	722, 1925, 2115, 2319
HapII	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1605, 2102, 2109
HgaI	GACGC	4 cut(s)	134, 471, 528, 738
HhaI	GCGC	4 cut(s)	186, 240, 467, 506
Hin1I	GRCGYC	2 cut(s)	126, 539
Hin1II	CATG	6 cut(s)	700, 1655, 1676, 1716, 1979, 2370
Hin6I	GCGC	4 cut(s)	184, 238, 465, 504
HinP1I	GCGC	4 cut(s)	184, 238, 465, 504
HincII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindIII	AAGCTT	2 cut(s)	473, 2019
HinfI	GANTC	9 cut(s)	104, 202, 232, 436, 548, 809, 1142, 2351, 2363
HpaI	GTTAAC	1 cut(s)	445
HpaII	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1605, 2102, 2109
HphI	GGTGA	9 cut(s)	52, 493, 712, 811, 1217, 1322, 1418, 1661, 1745
Hpy166II	GTNNAC	8 cut(s)	337, 391, 424, 445, 673, 1171, 1984, 2069
Hpy188I	TCNGA	6 cut(s)	140, 207, 219, 354, 454, 544
Hpy188III	TCNNGA	5 cut(s)	563, 1463, 1518, 2339, 2367
Hpy8I	GTNNAC	8 cut(s)	337, 391, 424, 445, 673, 1171, 1984, 2069
Hpy99I	CGWCG	3 cut(s)	128, 544, 754
HpyCH4IV	ACGT	1 cut(s)	420
HpyCH4V	TGCA	9 cut(s)	595, 760, 1324, 1792, 1826, 1856, 1879, 1888, 1918
HpyF10VI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1885, 2027
HpyF3I	CTNAG	5 cut(s)	216, 431, 1116, 1146, 1530
HpySE526I	ACGT	1 cut(s)	420
Hsp92I	GRCGYC	2 cut(s)	126, 539
Hsp92II	CATG	6 cut(s)	700, 1655, 1676, 1716, 1979, 2370
HspAI	GCGC	4 cut(s)	184, 238, 465, 504
KroI	GCCGGC	2 cut(s)	518, 535
KroNI	GCCGGC	2 cut(s)	520, 537
Ksp22I	TGATCA	3 cut(s)	768, 1459, 1558
KspAI	GTTAAC	1 cut(s)	445
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	7 cut(s)	25, 150, 301, 309, 354, 526, 709
Lsp1109I	GCAGC	7 cut(s)	418, 541, 772, 1336, 1804, 1838, 1840
LweI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
MaeI	CTAG	5 cut(s)	281, 713, 1307, 1812, 2268
MaeII	ACGT	1 cut(s)	420
MaeIII	GTNAC	3 cut(s)	740, 949, 1733
MfeI	CAATTG	1 cut(s)	380
MflI	RGATCY	2 cut(s)	1351, 2105
MhlI	GDGCHC	3 cut(s)	306, 972, 2062
MluCI	AATT	9 cut(s)	40, 47, 380, 580, 736, 1256, 1574, 1663, 2261
MlyI	GAGTC	3 cut(s)	98, 557, 818
MmeI	TCCRAC	2 cut(s)	522, 711
MreI	CGCCGGCG	1 cut(s)	535
MroNI	GCCGGC	2 cut(s)	518, 535
MroXI	GAANNNNTTC	1 cut(s)	1612
MseI	TTAA	9 cut(s)	444, 924, 1260, 1347, 1647, 2024, 2123, 2205, 2324
MslI	CAYNNNNRTG	1 cut(s)	1656
MspA1I	CMGCKG	2 cut(s)	409, 1327
MspI	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1605, 2102, 2109
MspR9I	CCNGG	5 cut(s)	148, 1605, 1927, 2103, 2110
MunI	CAATTG	1 cut(s)	380
MvaI	CCWGG	1 cut(s)	1927
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1885, 2027
NaeI	GCCGGC	2 cut(s)	520, 537
NciI	CCSGG	4 cut(s)	148, 1605, 2103, 2110
NcoI	CCATGG	1 cut(s)	1672
NgoMIV	GCCGGC	2 cut(s)	518, 535
NlaIII	CATG	6 cut(s)	700, 1655, 1676, 1716, 1979, 2370
NlaIV	GGNNCC	6 cut(s)	27, 152, 1592, 1633, 2107, 2114
NmuCI	GTSAC	2 cut(s)	949, 1733
NspV	TTCGAA	1 cut(s)	578
PagI	TCATGA	1 cut(s)	2366
PceI	AGGCCT	1 cut(s)	2319
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	2 cut(s)	132, 294
PdiI	GCCGGC	2 cut(s)	520, 537
PdmI	GAANNNNTTC	1 cut(s)	1612
PfeI	GAWTC	6 cut(s)	202, 232, 436, 1142, 2351, 2363
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	2 cut(s)	1603, 2101
PinAI	ACCGGT	1 cut(s)	447
PkrI	GCNGC	9 cut(s)	315, 408, 531, 534, 762, 1326, 1794, 1828, 1855
Ple19I	CGATCG	1 cut(s)	352
PleI	GAGTC	3 cut(s)	98, 556, 817
PpsI	GAGTC	3 cut(s)	98, 556, 817
PpuMI	RGGWCCY	1 cut(s)	1591
PshAI	GACNNNNGTC	1 cut(s)	8
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	1591
Psp6I	CCWGG	1 cut(s)	1925
PspFI	CCCAGC	5 cut(s)	316, 402, 617, 1292, 2219
PspGI	CCWGG	1 cut(s)	1925
PspN4I	GGNNCC	6 cut(s)	27, 152, 1592, 1633, 2107, 2114
PspPI	GGNCC	6 cut(s)	156, 450, 1591, 1631, 1981, 2113
PspPPI	RGGWCCY	1 cut(s)	1591
PstNI	CAGNNNCTG	1 cut(s)	1274
PsuI	RGATCY	2 cut(s)	1351, 2105
PsyI	GACNNNGTC	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	352
RsaI	GTAC	1 cut(s)	695
RsaNI	GTAC	1 cut(s)	694
RseI	CAYNNNNRTG	1 cut(s)	1656
Rsr2I	CGGWCCG	2 cut(s)	156, 450
RsrII	CGGWCCG	2 cut(s)	156, 450
SacI	GAGCTC	1 cut(s)	306
SapI	GCTCTTC	1 cut(s)	494
SaqAI	TTAA	9 cut(s)	444, 924, 1260, 1347, 1647, 2024, 2123, 2205, 2324
SatI	GCNGC	9 cut(s)	314, 407, 530, 533, 761, 1325, 1793, 1827, 1854
Sau96I	GGNCC	6 cut(s)	156, 450, 1591, 1631, 1981, 2113
SchI	GAGTC	3 cut(s)	98, 557, 818
ScrFI	CCNGG	5 cut(s)	148, 1605, 1927, 2103, 2110
SduI	GDGCHC	3 cut(s)	306, 972, 2062
SfaNI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
SfcI	CTRYAG	2 cut(s)	2011, 2089
SfuI	TTCGAA	1 cut(s)	578
SgrAI	CRCCGGYG	1 cut(s)	535
SinI	GGWCC	5 cut(s)	156, 450, 1591, 1631, 1981
SmiMI	CAYNNNNRTG	1 cut(s)	1656
SmlI	CTYRAG	3 cut(s)	308, 488, 2309
SmoI	CTYRAG	3 cut(s)	308, 488, 2309
Sse9I	AATT	9 cut(s)	40, 47, 380, 580, 736, 1256, 1574, 1663, 2261
SseBI	AGGCCT	1 cut(s)	2319
SsiI	CCGC	9 cut(s)	159, 270, 313, 409, 533, 1010, 1040, 1160, 1327
SspMI	CTAG	5 cut(s)	281, 713, 1307, 1812, 2268
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	2319
StyD4I	CCNGG	5 cut(s)	146, 1603, 1925, 2101, 2108
StyI	CCWWGG	2 cut(s)	1586, 1672
TaiI	ACGT	1 cut(s)	423
TaqI	TCGA	5 cut(s)	12, 288, 348, 578, 812
TasI	AATT	9 cut(s)	40, 47, 380, 580, 736, 1256, 1574, 1663, 2261
TauI	GCSGC	2 cut(s)	316, 535
TfiI	GAWTC	6 cut(s)	202, 232, 436, 1142, 2351, 2363
Tru1I	TTAA	9 cut(s)	444, 924, 1260, 1347, 1647, 2024, 2123, 2205, 2324
Tru9I	TTAA	9 cut(s)	444, 924, 1260, 1347, 1647, 2024, 2123, 2205, 2324
TscAI	CASTG	3 cut(s)	1557, 1772, 1802
TseFI	GTSAC	2 cut(s)	949, 1733
TseI	GCWGC	7 cut(s)	406, 529, 760, 1324, 1792, 1826, 1853
Tsp45I	GTSAC	2 cut(s)	949, 1733
TspDTI	ATGAA	5 cut(s)	104, 1443, 1458, 2006, 2253
TspRI	CASTG	3 cut(s)	1557, 1772, 1802
Tth111I	GACNNNGTC	1 cut(s)	332
VpaK11BI	GGWCC	5 cut(s)	156, 450, 1591, 1631, 1981
XapI	RAATTY	2 cut(s)	1256, 1574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1679
XmnI	GAANNNNTTC	1 cut(s)	1612
XspI	CTAG	5 cut(s)	281, 713, 1307, 1812, 2268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.