Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Reverse (-)

42102398 .. 42106724

Gene Structure 4327 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G027050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGACCCAAGTCGAAGGAGAGGAGGAGCCACAGAACCCTAATTCCCAATTTGAAACACTCACCCTACAACCCCCTCCACAACCACAAATGAAGCCTCAACCCGACTCAAACCAAGACAACCCCGACGCCTTCCCCGTCCGATCTCCCCGGAGCCGGACCGCCATAACCTTCGCTCGCAAGAAGCGCAAGAAGACGGGCAGGAATCCGAAAGCCTCTCAGAAGAAGCTGGAGATTCTGCGCCAAACCCTAAAGCCAATCCCCTTCGTCCCCGCCAAAACCCTAGACTTCGACAGCCACGAGGACCTCCTGAAGCGGCTGGGCTTGTGGGACTTCGTCCACATCAAGTTCGATCGGAGCATTAGGGCTGATCTCCTCGCCCAATTGATCGTCAACTTCAACTCCCAGCAGCGGTGTAGCTACGTCAACGAGCTTAGGATTCTGGTTAACCGGTCCGATCTGGGACGCGCATTGAAGCTTCCGGTGATGCTCAAGTCCAAGAAGAGCGCCGTGGAAGATGCCGGCGAGGAGCAGCCGCCGGCCTCGGAGGAGTCGATAGCTTTTCTGGAGGATTTGGTTTCGAATTGGATGCTTTTGCACGGGGATATGTGGATGATGCCCAGCGAGGTGTTGGGTTATACCAAAGCAATCAAAGAAGGTCAGTTTGGGAAGGTGGACTGGGCTGGTTTGGTTTGGTACATGGTGAATGAGGAGCTAGGTAAGGCCACGCAGTTGGAGAATTGTTACTATGCGTCGCATTTGCAGCATTTGATCAAGTCGCAGAAGGAGGATTTGTTTTCGGTGAAGCAAGAGTCGAAAGTGGAGATTGATTTGAAGGATGATGATGAGGAAGAAGAGGAAGAGGATGGTGGTGGGGATGTGAAAATGGATGATGTTCAGGGAGGCAGATTGGAGGAGAATGATATTCAGTTGTGTCTCGGGCAAGAAAATGTGACCAAAGTTGAGGTTGAGCACGAAAACTTGGAGAAAGTTGATGTTGAGCGAGAAGATGCGGAGAATGTTGATGATGAGCGAGAAGATGCGGAGAAAGTTGATGTTGGGAAAGAGAATGTGGAGAAAGATGATGTTGGGCAAGAGAAGGTGGAGGAAGTTGAGGCTGAGCAAGAAAATGTAGAGAAAGTTGATTCTCACCAAGGAAATGCGGAGAAAGTTGACGTTGGAGAAGACAATGTTGAGAAAGTTTGTGGTGAAACAGAGCGGGTTGAGGTTGAGGTTGAGGATGAGGATGTGATGGATTTTGAAGAATTTAAGGAGGCAGAGCCTGCCCAATGGGTTTTGGCTGGGAAGGACAATCTAGGTGAGCCTTGTTTGCAGCGGTGTAATCTCGGTGGTATTAAGGATCTTGGTTGTGGGGATGAGAGAAATAAAAATATGGAGTTGGGAGAAGGAGTAGGTGAAGAAGAACAAGAAGATGATGAAATAGAAGAAGAGGAAGAGGAGGATGATGATCAGGAGGGTGGTTTCCACCTTTTGCCTAAAGGTTTTTCTTTAGAGGGGTTTCCTTCAGGAAATCTTACTCAGGGTATGGATGGTATGCCACTGCGTGATCATTTTGGCATAGAATTTCCTTCTCCAAGGGACCTAATGCTTCCCGGAAGTTCTTCCATTTATGGTAATGGTCCCAAGAGAGAGATTAACCATGAGAATGATAATTCTCATCATGGTCTCAATGGTAATAAGAGGTTGAGGACAGAAGGCTCTTGGGATAGTAAAATGTCTGGTGACTTTGAGACAGGTATGGATCAAATACAGCAGTGGATGGGGAGAGTGGAGGATATGCAGCAGTGGATGGGAAAAGCTAGGATGATGTATACAGCAAAAGAACAGGAGTGCCAACAAGCTGCAAATAACCAGCAGTATTTTATGCAAGAGTTGCAGAGAAGGGATGAGATGATTGAGCACTTGCATAAGGGCAGGTTTGAAGACCAGCAAAAGTTTCAAACAGAGAAGTTTAGGTTTGAGCATGAGGTCCACTTGATGAAAAATCTCTTGGACGGCTATAGGAAAGCTTTAAAGGCAACACAAAAGGCATTTGCTGAACATAGAGCACATTGTCCACAGGCTGTTGAGCCACTCTACAGGGATGTTCCGGGATCCGGGGGCCTTGTTTTAAGCACCACGGAACTGGAAAAGCTACGCATAAAGCAAGAAGAAGAAGAGAGGATAAATAGACTGGCGATTGAAACGATGATTAAGGACTTTGAAGCTGGGTGGAGTAGTGAATATGAAGCGCACCAAAAGAGTGTTGAATTAGCTAGTAGCAGGTTGATGGATGTTGAGAAGGAAGTGAAACTTCTCAAGGAAGGCCTTTTAAAACAGAGGCTTCCAGAAACACAAGAATCTCCAAATGAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

791

Amino Acids

90.6

Weight (kDa)

4.64

Isoelectric Point (pI)

53.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1923, 2271
AccBSI	CCGCTC	1 cut(s)	1216
AccI	GTMKAC	1 cut(s)	1829
AccII	CGCG	1 cut(s)	465
AclWI	GGATC	4 cut(s)	1365, 1767, 2106, 2119
AcsI	RAATTY	2 cut(s)	1262, 1580
AcuI	CTGAAG	2 cut(s)	329, 1506
AcyI	GRCGYC	1 cut(s)	126
AdeI	CACNNNGTG	1 cut(s)	1562
AfaI	GTAC	1 cut(s)	695
AfiI	CCNNNNNNNGG	3 cut(s)	153, 408, 2114
AgeI	ACCGGT	1 cut(s)	447
AjuI	GAANNNNNNNTTGG	4 cut(s)	645, 677, 1991, 2023
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
Alw21I	GWGCWC	3 cut(s)	972, 1920, 2068
Alw26I	GTCTC	3 cut(s)	938, 1688, 1742
AlwI	GGATC	4 cut(s)	1365, 1767, 2106, 2119
AlwNI	CAGNNNCTG	1 cut(s)	1280
Ama87I	CYCGRG	1 cut(s)	935
AoxI	GGCC	4 cut(s)	537, 720, 2119, 2323
ApeKI	GCWGC	6 cut(s)	406, 529, 760, 1330, 1798, 1859
ApoI	RAATTY	2 cut(s)	1262, 1580
AsiGI	ACCGGT	1 cut(s)	447
Asp700I	GAANNNNTTC	1 cut(s)	1618
AspLEI	GCGC	5 cut(s)	186, 240, 467, 506, 2251
AspS9I	GGNCC	7 cut(s)	156, 301, 450, 1597, 1637, 1987, 2119
AsuC2I	CCSGG	4 cut(s)	148, 1611, 2109, 2116
AsuHPI	GGTGA	9 cut(s)	52, 493, 712, 811, 1139, 1217, 1328, 1424, 1751
AsuII	TTCGAA	1 cut(s)	578
AvaI	CYCGRG	1 cut(s)	935
AvaII	GGWCC	6 cut(s)	156, 301, 450, 1597, 1637, 1987
BamHI	GGATCC	1 cut(s)	2111
BauI	CACGAG	1 cut(s)	296
BbsI	GAAGAC	3 cut(s)	197, 1188, 1947
Bbv12I	GWGCWC	3 cut(s)	972, 1920, 2068
BbvI	GCAGC	6 cut(s)	418, 541, 772, 1342, 1810, 1846
BccI	CCATC	6 cut(s)	857, 1243, 1541, 1771, 1801, 2281
BceAI	ACGGC	2 cut(s)	491, 2029
BcgI	CGANNNNNNTGC	2 cut(s)	568, 602
BclI	TGATCA	3 cut(s)	768, 1465, 1564
BcnI	CCSGG	4 cut(s)	148, 1611, 2109, 2116
BcoDI	GTCTC	3 cut(s)	938, 1688, 1742
BfaI	CTAG	5 cut(s)	281, 713, 1313, 1818, 2274
BfmI	CTRYAG	2 cut(s)	2017, 2095
BfoI	RGCGCY	1 cut(s)	507
BfuAI	ACCTGC	2 cut(s)	1923, 2271
BisI	GCNGC	8 cut(s)	314, 407, 530, 533, 761, 1331, 1799, 1860
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	8 cut(s)	315, 408, 531, 534, 762, 1332, 1800, 1861
Bme1390I	CCNGG	4 cut(s)	148, 1611, 2109, 2116
Bme18I	GGWCC	6 cut(s)	156, 301, 450, 1597, 1637, 1987
BmeT110I	CYCGRG	1 cut(s)	935
BmgT120I	GGNCC	7 cut(s)	156, 301, 450, 1597, 1637, 1987, 2119
BmiI	GGNNCC	6 cut(s)	27, 152, 1598, 1639, 2113, 2120
BmrFI	CCNGG	4 cut(s)	148, 1611, 2109, 2116
BmrI	ACTGGG	1 cut(s)	685
BmsI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
BmuI	ACTGGG	1 cut(s)	685
BoxI	GACNNNNGTC	1 cut(s)	8
BpiI	GAAGAC	3 cut(s)	197, 1188, 1947
BpmI	CTGGAG	2 cut(s)	248, 584
Bpu10I	CCTNAGC	1 cut(s)	431
Bpu1102I	GCTNAGC	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	2 cut(s)	473, 2300
BpuMI	CCSGG	4 cut(s)	148, 1611, 2109, 2116
BsaBI	GATNNNNATC	1 cut(s)	1464
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	1688
BsaJI	CCNNGG	7 cut(s)	146, 507, 540, 1150, 1592, 2115, 2136
BsaWI	WCCGGW	2 cut(s)	447, 478
BsaXI	ACNNNNNCTCC	6 cut(s)	383, 413, 776, 806, 1392, 1422
Bsc4I	CCNNNNNNNGG	3 cut(s)	153, 408, 2114
Bse118I	RCCGGY	3 cut(s)	447, 518, 535
Bse1I	ACTGG	3 cut(s)	680, 2148, 2196
Bse8I	GATNNNNATC	1 cut(s)	1464
BseDI	CCNNGG	7 cut(s)	146, 507, 540, 1150, 1592, 2115, 2136
BseJI	GATNNNNATC	1 cut(s)	1464
BseLI	CCNNNNNNNGG	3 cut(s)	153, 408, 2114
BseMII	CTCAG	3 cut(s)	230, 1107, 1550
BseNI	ACTGG	3 cut(s)	680, 2148, 2196
BseRI	GAGGAG	8 cut(s)	35, 38, 362, 539, 560, 722, 926, 1469
BseXI	GCAGC	6 cut(s)	418, 541, 772, 1342, 1810, 1846
BseYI	CCCAGC	5 cut(s)	316, 402, 617, 1298, 2225
Bsh1236I	CGCG	1 cut(s)	465
Bsh1285I	CGRYCG	1 cut(s)	352
BshFI	GGCC	4 cut(s)	539, 722, 2121, 2325
BshTI	ACCGGT	1 cut(s)	447
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	3 cut(s)	972, 1920, 2068
BsiHKCI	CYCGRG	1 cut(s)	935
BsiSI	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1611, 2108, 2115
BslFI	GGGAC	5 cut(s)	251, 341, 474, 1610, 1623
BslI	CCNNNNNNNGG	3 cut(s)	153, 408, 2114
BsmAI	GTCTC	3 cut(s)	938, 1688, 1742
BsmFI	GGGAC	5 cut(s)	251, 341, 474, 1610, 1623
BsnI	GGCC	4 cut(s)	539, 722, 2121, 2325
Bso31I	GGTCTC	1 cut(s)	1688
BsoBI	CYCGRG	1 cut(s)	935
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1286I	GDGCHC	3 cut(s)	972, 1920, 2068
Bsp1720I	GCTNAGC	1 cut(s)	1116
BspANI	GGCC	4 cut(s)	539, 722, 2121, 2325
BspCNI	CTCAG	3 cut(s)	229, 1108, 1549
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	2372
BspLI	GGNNCC	6 cut(s)	27, 152, 1598, 1639, 2113, 2120
BspMI	ACCTGC	2 cut(s)	1923, 2271
BspPI	GGATC	4 cut(s)	1365, 1767, 2106, 2119
BspQI	GCTCTTC	1 cut(s)	494
BspT104I	TTCGAA	1 cut(s)	578
BspTNI	GGTCTC	1 cut(s)	1688
BsrBI	CCGCTC	1 cut(s)	1216
BsrFI	RCCGGY	3 cut(s)	447, 518, 535
BsrI	ACTGG	3 cut(s)	680, 2148, 2196
BssAI	RCCGGY	3 cut(s)	447, 518, 535
BssECI	CCNNGG	7 cut(s)	146, 507, 540, 1150, 1592, 2115, 2136
BssNAI	GTATAC	1 cut(s)	1830
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	1 cut(s)	296
BssT1I	CCWWGG	2 cut(s)	1150, 1592
Bst1107I	GTATAC	1 cut(s)	1830
Bst2BI	CACGAG	1 cut(s)	296
Bst6I	CTCTTC	6 cut(s)	494, 846, 852, 1440, 1446, 2169
BstACI	GRCGYC	1 cut(s)	126
BstAPI	GCANNNNNTGC	2 cut(s)	1280, 1891
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	4 cut(s)	175, 520, 537, 1281
BstDEI	CTNAG	4 cut(s)	216, 431, 1116, 1536
BstDSI	CCRYGG	2 cut(s)	507, 2136
BstFNI	CGCG	1 cut(s)	465
BstH2I	RGCGCY	1 cut(s)	507
BstHHI	GCGC	5 cut(s)	186, 240, 467, 506, 2251
BstMAI	GTCTC	3 cut(s)	938, 1688, 1742
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	6 cut(s)	183, 760, 1280, 1327, 1891, 2033
BstPAI	GACNNNNGTC	1 cut(s)	8
BstSCI	CCNGG	4 cut(s)	146, 1609, 2107, 2114
BstSFI	CTRYAG	2 cut(s)	2017, 2095
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	6 cut(s)	418, 541, 772, 1342, 1810, 1846
BstV2I	GAAGAC	3 cut(s)	197, 1188, 1947
BstX2I	RGATCY	2 cut(s)	1357, 2111
BstXI	CCANNNNNNTGG	2 cut(s)	730, 2143
BstYI	RGATCY	2 cut(s)	1357, 2111
BstZ17I	GTATAC	1 cut(s)	1830
BsuRI	GGCC	4 cut(s)	539, 722, 2121, 2325
BtgI	CCRYGG	2 cut(s)	507, 2136
BtsI	GCAGTG	3 cut(s)	1556, 1778, 1808
BtsIMutI	CAGTG	3 cut(s)	1556, 1778, 1808
BveI	ACCTGC	2 cut(s)	1923, 2271
Cac8I	GCNNGC	4 cut(s)	175, 520, 537, 1281
CaiI	CAGNNNCTG	1 cut(s)	1280
CciI	TCATGA	1 cut(s)	2372
CfoI	GCGC	5 cut(s)	186, 240, 467, 506, 2251
Cfr10I	RCCGGY	3 cut(s)	447, 518, 535
Cfr13I	GGNCC	7 cut(s)	156, 301, 450, 1597, 1637, 1987, 2119
CpoI	CGGWCCG	2 cut(s)	156, 450
CseI	GACGC	3 cut(s)	134, 471, 738
Csp6I	GTAC	1 cut(s)	694
CspAI	ACCGGT	1 cut(s)	447
CspI	CGGWCCG	2 cut(s)	156, 450
CviAII	CATG	5 cut(s)	697, 1658, 1679, 1982, 2373
CviQI	GTAC	1 cut(s)	694
DdeI	CTNAG	4 cut(s)	216, 431, 1116, 1536
DraI	TTTAAA	2 cut(s)	2031, 2331
DraIII	CACNNNGTG	1 cut(s)	1562
Eam1104I	CTCTTC	6 cut(s)	494, 846, 852, 1440, 1446, 2169
EarI	CTCTTC	6 cut(s)	494, 846, 852, 1440, 1446, 2169
Eco130I	CCWWGG	2 cut(s)	1150, 1592
Eco147I	AGGCCT	1 cut(s)	2325
Eco31I	GGTCTC	1 cut(s)	1688
Eco47I	GGWCC	6 cut(s)	156, 301, 450, 1597, 1637, 1987
Eco57I	CTGAAG	2 cut(s)	329, 1506
Eco88I	CYCGRG	1 cut(s)	935
EcoO109I	RGGNCCY	3 cut(s)	301, 1597, 2119
EcoT14I	CCWWGG	2 cut(s)	1150, 1592
ErhI	CCWWGG	2 cut(s)	1150, 1592
FaeI	CATG	5 cut(s)	700, 1661, 1682, 1985, 2376
FalI	AAGNNNNNCTT	2 cut(s)	2295, 2327
FaqI	GGGAC	5 cut(s)	251, 341, 474, 1610, 1623
FatI	CATG	5 cut(s)	696, 1657, 1678, 1981, 2372
FauI	CCCGC	2 cut(s)	277, 1209
FbaI	TGATCA	3 cut(s)	768, 1465, 1564
FblI	GTMKAC	1 cut(s)	1829
Fnu4HI	GCNGC	8 cut(s)	314, 407, 530, 533, 761, 1331, 1799, 1860
Fsp4HI	GCNGC	8 cut(s)	314, 407, 530, 533, 761, 1331, 1799, 1860
FspBI	CTAG	5 cut(s)	281, 713, 1313, 1818, 2274
GlaI	GCGC	5 cut(s)	185, 239, 466, 505, 2250
GluI	GCNGC	8 cut(s)	314, 407, 530, 533, 761, 1331, 1799, 1860
GsaI	CCCAGC	5 cut(s)	320, 406, 621, 1302, 2229
GsuI	CTGGAG	2 cut(s)	248, 584
HaeII	RGCGCY	1 cut(s)	507
HaeIII	GGCC	4 cut(s)	539, 722, 2121, 2325
HapII	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1611, 2108, 2115
HgaI	GACGC	3 cut(s)	134, 471, 738
HhaI	GCGC	5 cut(s)	186, 240, 467, 506, 2251
Hin1I	GRCGYC	1 cut(s)	126
Hin1II	CATG	5 cut(s)	700, 1661, 1682, 1985, 2376
Hin6I	GCGC	5 cut(s)	184, 238, 465, 504, 2249
HinP1I	GCGC	5 cut(s)	184, 238, 465, 504, 2249
HincII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindIII	AAGCTT	2 cut(s)	473, 2025
HinfI	GANTC	9 cut(s)	104, 202, 232, 436, 548, 809, 1142, 2357, 2369
HpaI	GTTAAC	1 cut(s)	445
HpaII	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1611, 2108, 2115
HphI	GGTGA	9 cut(s)	52, 493, 712, 811, 1139, 1217, 1328, 1424, 1751
Hpy166II	GTNNAC	9 cut(s)	337, 391, 424, 445, 673, 1171, 1830, 1990, 2075
Hpy188I	TCNGA	6 cut(s)	140, 207, 219, 354, 454, 544
Hpy188III	TCNNGA	6 cut(s)	307, 563, 1469, 1524, 2345, 2373
Hpy8I	GTNNAC	9 cut(s)	337, 391, 424, 445, 673, 1171, 1830, 1990, 2075
Hpy99I	CGWCG	2 cut(s)	128, 754
HpyCH4IV	ACGT	2 cut(s)	420, 1173
HpyCH4V	TGCA	8 cut(s)	595, 760, 1330, 1798, 1862, 1885, 1894, 1924
HpyF10VI	GCNNNNNNNGC	6 cut(s)	183, 760, 1280, 1327, 1891, 2033
HpyF3I	CTNAG	4 cut(s)	216, 431, 1116, 1536
HpySE526I	ACGT	2 cut(s)	420, 1173
Hsp92I	GRCGYC	1 cut(s)	126
Hsp92II	CATG	5 cut(s)	700, 1661, 1682, 1985, 2376
HspAI	GCGC	5 cut(s)	184, 238, 465, 504, 2249
KroI	GCCGGC	2 cut(s)	518, 535
KroNI	GCCGGC	2 cut(s)	520, 537
Ksp22I	TGATCA	3 cut(s)	768, 1465, 1564
KspAI	GTTAAC	1 cut(s)	445
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	5 cut(s)	25, 150, 354, 526, 709
Lsp1109I	GCAGC	6 cut(s)	418, 541, 772, 1342, 1810, 1846
LweI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
MaeI	CTAG	5 cut(s)	281, 713, 1313, 1818, 2274
MaeII	ACGT	2 cut(s)	420, 1173
MaeIII	GTNAC	3 cut(s)	740, 949, 1739
MbiI	CCGCTC	1 cut(s)	1216
MfeI	CAATTG	1 cut(s)	380
MflI	RGATCY	2 cut(s)	1357, 2111
MhlI	GDGCHC	3 cut(s)	972, 1920, 2068
MluCI	AATT	9 cut(s)	40, 47, 380, 580, 736, 1262, 1580, 1669, 2267
MlyI	GAGTC	3 cut(s)	98, 557, 818
MmeI	TCCRAC	2 cut(s)	711, 1156
MroNI	GCCGGC	2 cut(s)	518, 535
MroXI	GAANNNNTTC	1 cut(s)	1618
MseI	TTAA	8 cut(s)	444, 1266, 1353, 1653, 2030, 2129, 2211, 2330
MslI	CAYNNNNRTG	1 cut(s)	1662
MspA1I	CMGCKG	2 cut(s)	409, 1333
MspI	CCGG	9 cut(s)	148, 154, 448, 479, 519, 536, 1611, 2108, 2115
MspR9I	CCNGG	4 cut(s)	148, 1611, 2109, 2116
MunI	CAATTG	1 cut(s)	380
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	6 cut(s)	183, 760, 1280, 1327, 1891, 2033
NaeI	GCCGGC	2 cut(s)	520, 537
NciI	CCSGG	4 cut(s)	148, 1611, 2109, 2116
NgoMIV	GCCGGC	2 cut(s)	518, 535
NlaIII	CATG	5 cut(s)	700, 1661, 1682, 1985, 2376
NlaIV	GGNNCC	6 cut(s)	27, 152, 1598, 1639, 2113, 2120
NmuCI	GTSAC	2 cut(s)	949, 1739
NspV	TTCGAA	1 cut(s)	578
PagI	TCATGA	1 cut(s)	2372
PceI	AGGCCT	1 cut(s)	2325
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 294, 548
PdiI	GCCGGC	2 cut(s)	520, 537
PdmI	GAANNNNTTC	1 cut(s)	1618
PfeI	GAWTC	6 cut(s)	202, 232, 436, 1142, 2357, 2369
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	2 cut(s)	1609, 2107
PinAI	ACCGGT	1 cut(s)	447
PkrI	GCNGC	8 cut(s)	315, 408, 531, 534, 762, 1332, 1800, 1861
Ple19I	CGATCG	1 cut(s)	352
PleI	GAGTC	3 cut(s)	98, 556, 817
PpsI	GAGTC	3 cut(s)	98, 556, 817
PpuMI	RGGWCCY	2 cut(s)	301, 1597
PshAI	GACNNNNGTC	1 cut(s)	8
Psp5II	RGGWCCY	2 cut(s)	301, 1597
PspFI	CCCAGC	5 cut(s)	316, 402, 617, 1298, 2225
PspN4I	GGNNCC	6 cut(s)	27, 152, 1598, 1639, 2113, 2120
PspPI	GGNCC	7 cut(s)	156, 301, 450, 1597, 1637, 1987, 2119
PspPPI	RGGWCCY	2 cut(s)	301, 1597
PstNI	CAGNNNCTG	1 cut(s)	1280
PsuI	RGATCY	2 cut(s)	1357, 2111
PsyI	GACNNNGTC	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	352
RsaI	GTAC	1 cut(s)	695
RsaNI	GTAC	1 cut(s)	694
RseI	CAYNNNNRTG	1 cut(s)	1662
Rsr2I	CGGWCCG	2 cut(s)	156, 450
RsrII	CGGWCCG	2 cut(s)	156, 450
SapI	GCTCTTC	1 cut(s)	494
SaqAI	TTAA	8 cut(s)	444, 1266, 1353, 1653, 2030, 2129, 2211, 2330
SatI	GCNGC	8 cut(s)	314, 407, 530, 533, 761, 1331, 1799, 1860
Sau96I	GGNCC	7 cut(s)	156, 301, 450, 1597, 1637, 1987, 2119
SchI	GAGTC	3 cut(s)	98, 557, 818
ScrFI	CCNGG	4 cut(s)	148, 1611, 2109, 2116
SduI	GDGCHC	3 cut(s)	972, 1920, 2068
SfaNI	GCATC	6 cut(s)	474, 505, 576, 603, 997, 1027
SfcI	CTRYAG	2 cut(s)	2017, 2095
SfuI	TTCGAA	1 cut(s)	578
SinI	GGWCC	6 cut(s)	156, 301, 450, 1597, 1637, 1987
SmiMI	CAYNNNNRTG	1 cut(s)	1662
SmlI	CTYRAG	2 cut(s)	488, 2315
SmoI	CTYRAG	2 cut(s)	488, 2315
Sse9I	AATT	9 cut(s)	40, 47, 380, 580, 736, 1262, 1580, 1669, 2267
SseBI	AGGCCT	1 cut(s)	2325
SspMI	CTAG	5 cut(s)	281, 713, 1313, 1818, 2274
StuI	AGGCCT	1 cut(s)	2325
StyD4I	CCNGG	4 cut(s)	146, 1609, 2107, 2114
StyI	CCWWGG	2 cut(s)	1150, 1592
TaiI	ACGT	2 cut(s)	423, 1176
TaqI	TCGA	6 cut(s)	12, 288, 348, 551, 578, 812
TasI	AATT	9 cut(s)	40, 47, 380, 580, 736, 1262, 1580, 1669, 2267
TauI	GCSGC	2 cut(s)	316, 535
TfiI	GAWTC	6 cut(s)	202, 232, 436, 1142, 2357, 2369
Tru1I	TTAA	8 cut(s)	444, 1266, 1353, 1653, 2030, 2129, 2211, 2330
Tru9I	TTAA	8 cut(s)	444, 1266, 1353, 1653, 2030, 2129, 2211, 2330
TscAI	CASTG	3 cut(s)	1563, 1778, 1808
TseFI	GTSAC	2 cut(s)	949, 1739
TseI	GCWGC	6 cut(s)	406, 529, 760, 1330, 1798, 1859
Tsp45I	GTSAC	2 cut(s)	949, 1739
TspDTI	ATGAA	4 cut(s)	104, 1449, 2012, 2259
TspGWI	ACGGA	1 cut(s)	2153
TspRI	CASTG	3 cut(s)	1563, 1778, 1808
Tth111I	GACNNNGTC	1 cut(s)	332
VpaK11BI	GGWCC	6 cut(s)	156, 301, 450, 1597, 1637, 1987
XapI	RAATTY	2 cut(s)	1262, 1580
XcmI	CCANNNNNNNNNTGG	1 cut(s)	625
XmiI	GTMKAC	1 cut(s)	1829
XmnI	GAANNNNTTC	1 cut(s)	1618
XspI	CTAG	5 cut(s)	281, 713, 1313, 1818, 2274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.