Rh5CG376800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0002771
Physical Location & Seq
Reverse (-)
48821913 .. 48826749
4837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG376800.1

Sequence Viewer

Length: 2217 bp
ATGGAGCAAAACCCTCTTCAATCCGACGGCCCAGATGGCCTTCCCGTCAGGTCCACGACCCTCATAACCTTCTCCCGCCGAGGCCGAAACCGGAATCCTAAAGCTGCTCAGCAGAGACTTGAAATCCTCAGAAAAACCCTAAACCCAATTCCCTTCGTGCCCGCCAAAAACCCGAACTTGCAGCGCCATGAGGAGCTCCTGAAGCGGCTGGGCCTCTGGGACTTTCTCCACATCCAGTTTGATCCGACTGTTCGGGCTGATCTTATTGCTGAGTTGATTGTTAACTATAACCCTCAGCGGCGGTGCAGCTACGTCGGTGAGGTCCGGATTAGGGTCAGCCCTGCCGATTTGGGACGCGCATTGAAGCTTCCGGTTGGGGTGAAATCGAAGAAGAGTGTGGTTGCAGGTGAGGTGGAGGAGGCTCCGGCGGCGGCGGAATCGATAGCTTTGGTTGAGGATTTGGTAGGCAATTGGGTGCTTTTGCAGGAGGATGAGCCCAGGGAGGTTTTGAAGTGGTGTAAGGATATCAAAGATGGGCAGTTTGGGAATGTGGATTGGGCTGGTTTGATTTGGTTCATGGTGGAAAAGGAGTTGCTTAAGGGTCTACAGTTGGGGGATTGTTACTATGCATCGCATTTGCAGTTATTGATAAAATCTCAGTGCGAGAGTTTGTTTTCGGAGAAGGGACAAGGGTCTAGGGTGGGGATTGAGTTGAAGGAGGACGGGGAAGAGGATGGTATAATGGGTGGGGAGGATGATTTTCAGGGAGGCAGATTGGAGGAGCAAAGTATTAAACTATGTCTTGGGGAAGAAAATGTGGAGAAAGTTGATGTTGAGCAAGAAAATGTTGAGAAAGTTGATGTTGAGCAAGAAAATGTGGAGGAAGTTGATGTTGAGCAGGAAAATGTGGAGGAACTTGATGTTGAGCAGGAAAATGTTGAGAAATTTAATATTGAGCAGGGAAATGTGGAGGAACTTGATGTTGAGCAAGAAAATGTGGAGAAAGTTGATGTTGACCAAGAAAATGAGGAGAAAGTTATAGGTGAAAGGGTGCTAGTTGAGGTTGAGGATGAGGATGAGGATGTAATGGATGTCGAAGAATTTAAGGAGGAAGAGCCTACCCAATGGCTTTTGGCTGGGAAGGGCAATTTAAGAGGACCTTGTTTGCAGCGGTGCAATCTTCATGGGGTCGAGGATTTGGGTTGTGGGGATGAGAGAAAAAATTATATGGAGTTGGGAGAAGAAGAAGATGATGATGAAGAAGAGGAAGAGGATGATCAGGAGGGAGGCTTCGACCTTTCAATGAAGGGTTTTTCTTTGGAGGGGTTGTCTTCAGGAAGTCTTATGCAGGTCATGGAAGGGGGCCATATCCCTCTTGGCTCTGGTATGCCACTGCATGATCATTTGGCCACAGATTTTCCTTCGCCAAGGTGGGACCTAATGCTTCCTGGAAGTTCCTCACTTTCTGGTAATGGTCACAAGAGAGAGTTTAGCCATGAAAATGATAATTCTCATCATGGTCTCGATGGTAATAAGAGGTTGAGGACTGATGGCCCTTGGCATAGTAAGATGCCGGGTGACTTTGACGTGTGTATGGAGCATATACAGCAGTGGATGGGGAAAATGGAGGATATACAACAGTGGATGGGGAAAGCTAGGATAATGTATGTGGCAAAAGAACAGGAGTGTGAAGATGCTAAAATGAAGCAGCAGCTTTTACTGGTAGAGTTGCAGAAAAGGGATGAGTTCATCGAGCACTTGCACAAGGCCAGGACCGAAGACCAGCAGAAGAGACAAACTGAGAAGTATAGGTTTGAGCATGAGGTTTATTTGATGCAAAATCTCTTGAATGGCTATAGGAAGGCTTTAAAGGCAACACAAAAGGCATTTGCTGAATATAAAGCATGCAATCCACAGGCTGATGAGCCACTCTATAGAGATGTTCCTGGTTCTGGGGGTCTTGTTTTAAGCACTCGAGAACTCGAAAAGCTTTGCTTAAAGCAAGAAGAAGAAGAGAGGATGAGGCGTCTGGTGATTGAAACAAAAATTAAGGACTTTGAAGCTGGGTGGATTAGCAAATTTGAAGCACACCACAAGAGTGTTGAAGTAGTGAGTAATAGGTTGTTGGGTGTGGAGAAGGAAGTGAAACTTCTCAATGAACAGCTTACAAAACAGAGGCTTTCAGAGACACCAGAACATACTCCAAATGAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

738

Amino Acids

84.4

Weight (kDa)

4.68

Isoelectric Point (pI)

55.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 395
Acc36I ACCTGC 2 cut(s) 395, 1339
AccI GTMKAC 1 cut(s) 604
AccII CGCG 1 cut(s) 357
AccIII TCCGGA 1 cut(s) 324
AciI CCGC 9 cut(s) 76, 162, 205, 298, 301, 428, 431, 434, 1171
AclWI GGATC 1 cut(s) 236
AcoI YGGCCR 1 cut(s) 1407
AcsI RAATTY 3 cut(s) 944, 1100, 2078
AcuI CTGAAG 2 cut(s) 221, 1317
AcyI GRCGYC 1 cut(s) 2026
AfiI CCNNNNNNNGG 2 cut(s) 331, 1952
AflII CTTAAG 1 cut(s) 596
AflIII ACRYGT 1 cut(s) 1587
AjiI CACGTC 1 cut(s) 1588
AjnI CCWGG 4 cut(s) 497, 1447, 1769, 1945
AleI CACNNNNGTG 1 cut(s) 2097
Alw21I GWGCWC 2 cut(s) 198, 1758
Alw26I GTCTC 4 cut(s) 109, 1526, 1786, 2180
AlwI GGATC 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 1974
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 8 cut(s) 28, 37, 82, 211, 1363, 1407, 1552, 1767
ApeKI GCWGC 6 cut(s) 104, 181, 306, 1168, 1708, 1711
ApoI RAATTY 3 cut(s) 944, 1100, 2078
AspLEI GCGC 2 cut(s) 186, 359
AspS9I GGNCC 9 cut(s) 29, 51, 211, 322, 1157, 1363, 1435, 1553, 1773
AsuC2I CCSGG 1 cut(s) 1575
AsuHPI GGTGA 6 cut(s) 329, 391, 419, 1055, 1589, 2044
AvaI CYCGRG 1 cut(s) 1974
AvaII GGWCC 5 cut(s) 51, 322, 1157, 1435, 1773
BaeGI GKGCMC 1 cut(s) 162
BalI TGGCCA 1 cut(s) 1409
BanII GRGCYC 2 cut(s) 198, 498
BbsI GAAGAC 2 cut(s) 1323, 1785
Bbv12I GWGCWC 2 cut(s) 198, 1758
BbvCI CCTCAGC 1 cut(s) 294
BbvI GCAGC 6 cut(s) 91, 193, 318, 1180, 1720, 1723
BccI CCATC 7 cut(s) 29, 527, 728, 1520, 1544, 1609, 1639
BceAI ACGGC 1 cut(s) 43
BcgI CGANNNNNNTGC 2 cut(s) 295, 329
BciT130I CCWGG 4 cut(s) 499, 1449, 1771, 1947
BclI TGATCA 2 cut(s) 1276, 1399
BcnI CCSGG 1 cut(s) 1575
BcoDI GTCTC 4 cut(s) 109, 1526, 1786, 2180
BfaI CTAG 3 cut(s) 696, 1055, 1656
BfmI CTRYAG 3 cut(s) 605, 1855, 1933
BfoI RGCGCY 1 cut(s) 187
BfrI CTTAAG 1 cut(s) 596
BfuAI ACCTGC 2 cut(s) 395, 1339
BglI GCCNNNNNGGC 1 cut(s) 36
BlpI GCTNAGC 1 cut(s) 108
Bme1390I CCNGG 5 cut(s) 499, 1449, 1575, 1771, 1947
Bme18I GGWCC 5 cut(s) 51, 322, 1157, 1435, 1773
BmeT110I CYCGRG 1 cut(s) 1974
BmgBI CACGTC 1 cut(s) 1588
BmgT120I GGNCC 9 cut(s) 29, 51, 211, 322, 1157, 1363, 1435, 1553, 1773
BmiI GGNNCC 3 cut(s) 423, 1364, 1436
BmrFI CCNGG 5 cut(s) 499, 1449, 1575, 1771, 1947
BmsI GCATC 4 cut(s) 638, 1560, 1684, 1824
BoxI GACNNNNGTC 1 cut(s) 691
BpiI GAAGAC 2 cut(s) 1323, 1785
Bpu10I CCTNAGC 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 108
BpuMI CCSGG 1 cut(s) 1575
Bsa29I ATCGAT 1 cut(s) 440
BsaHI GRCGYC 1 cut(s) 2026
BsaI GGTCTC 1 cut(s) 1526
BsaJI CCNNGG 5 cut(s) 79, 497, 498, 1427, 1556
BsaWI WCCGGW 3 cut(s) 90, 324, 370
BsaXI ACNNNNNCTCC 2 cut(s) 1313, 1343
Bsc4I CCNNNNNNNGG 2 cut(s) 331, 1952
Bse1I ACTGG 2 cut(s) 235, 1725
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 4 cut(s) 499, 1449, 1771, 1947
BseCI ATCGAT 1 cut(s) 440
BseDI CCNNGG 5 cut(s) 79, 497, 498, 1427, 1556
BseLI CCNNNNNNNGG 2 cut(s) 331, 1952
BseMII CTCAG 6 cut(s) 122, 142, 261, 308, 671, 1791
BseNI ACTGG 2 cut(s) 235, 1725
BseRI GAGGAG 4 cut(s) 206, 431, 794, 1043
BseSI GKGCMC 1 cut(s) 162
BseXI GCAGC 6 cut(s) 91, 193, 318, 1180, 1720, 1723
BseYI CCCAGC 3 cut(s) 208, 1136, 2063
BsgI GTGCAG 1 cut(s) 325
Bsh1236I CGCG 1 cut(s) 357
BshFI GGCC 8 cut(s) 30, 39, 84, 213, 1365, 1409, 1554, 1769
BshVI ATCGAT 1 cut(s) 440
BsiHKAI GWGCWC 2 cut(s) 198, 1758
BsiHKCI CYCGRG 1 cut(s) 1974
BsiSI CCGG 5 cut(s) 91, 325, 371, 425, 1574
BslFI GGGAC 4 cut(s) 233, 366, 699, 1448
BslI CCNNNNNNNGG 2 cut(s) 331, 1952
BsmAI GTCTC 4 cut(s) 109, 1526, 1786, 2180
BsmFI GGGAC 4 cut(s) 233, 366, 699, 1448
BsnI GGCC 8 cut(s) 30, 39, 84, 213, 1365, 1409, 1554, 1769
Bso31I GGTCTC 1 cut(s) 1526
BsoBI CYCGRG 1 cut(s) 1974
Bsp1286I GDGCHC 4 cut(s) 162, 198, 498, 1758
Bsp13I TCCGGA 1 cut(s) 324
Bsp143I GATC 4 cut(s) 241, 259, 1276, 1399
Bsp1720I GCTNAGC 1 cut(s) 108
BspACI CCGC 9 cut(s) 76, 162, 205, 298, 301, 428, 431, 434, 1171
BspANI GGCC 8 cut(s) 30, 39, 84, 213, 1365, 1409, 1554, 1769
BspCNI CTCAG 6 cut(s) 121, 141, 262, 307, 670, 1792
BspDI ATCGAT 1 cut(s) 440
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 1 cut(s) 357
BspHI TCATGA 1 cut(s) 2213
BspLI GGNNCC 3 cut(s) 423, 1364, 1436
BspMI ACCTGC 2 cut(s) 395, 1339
BspPI GGATC 1 cut(s) 236
BspQI GCTCTTC 1 cut(s) 1107
BspTI CTTAAG 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 1526
BsrI ACTGG 2 cut(s) 235, 1725
BssECI CCNNGG 5 cut(s) 79, 497, 498, 1427, 1556
BssMI GATC 4 cut(s) 241, 259, 1276, 1399
BssNI GRCGYC 1 cut(s) 2026
BssT1I CCWWGG 2 cut(s) 1427, 1556
Bst2UI CCWGG 4 cut(s) 499, 1449, 1771, 1947
Bst4CI ACNGT 3 cut(s) 250, 609, 1641
Bst6I CTCTTC 8 cut(s) 21, 386, 723, 1107, 1257, 1263, 1784, 2007
BstACI GRCGYC 1 cut(s) 2026
BstAFI CTTAAG 1 cut(s) 596
BstC8I GCNNGC 2 cut(s) 162, 1906
BstDEI CTNAG 6 cut(s) 108, 128, 270, 294, 657, 1800
BstFNI CGCG 1 cut(s) 357
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 2 cut(s) 186, 359
BstKTI GATC 4 cut(s) 244, 262, 1279, 1402
BstMAI GTCTC 4 cut(s) 109, 1526, 1786, 2180
BstMBI GATC 4 cut(s) 241, 259, 1276, 1399
BstMWI GCNNNNNNNGC 5 cut(s) 36, 202, 428, 1606, 1871
BstNI CCWGG 4 cut(s) 499, 1449, 1771, 1947
BstNSI RCATGY 1 cut(s) 1908
BstPAI GACNNNNGTC 1 cut(s) 691
BstSCI CCNGG 5 cut(s) 497, 1447, 1573, 1769, 1945
BstSFI CTRYAG 3 cut(s) 605, 1855, 1933
BstSLI GKGCMC 1 cut(s) 162
BstUI CGCG 1 cut(s) 357
BstV1I GCAGC 6 cut(s) 91, 193, 318, 1180, 1720, 1723
BstV2I GAAGAC 2 cut(s) 1323, 1785
Bsu15I ATCGAT 1 cut(s) 440
BsuRI GGCC 8 cut(s) 30, 39, 84, 213, 1365, 1409, 1554, 1769
BsuTUI ATCGAT 1 cut(s) 440
BtgZI GCGATG 1 cut(s) 615
BtrI CACGTC 1 cut(s) 1588
BtsI GCAGTG 2 cut(s) 1391, 1616
BtsIMutI CAGTG 4 cut(s) 665, 1391, 1616, 1646
BveI ACCTGC 2 cut(s) 395, 1339
Cac8I GCNNGC 2 cut(s) 162, 1906
CciI TCATGA 1 cut(s) 2213
CfoI GCGC 2 cut(s) 186, 359
Cfr13I GGNCC 9 cut(s) 29, 51, 211, 322, 1157, 1363, 1435, 1553, 1773
ClaI ATCGAT 1 cut(s) 440
CseI GACGC 2 cut(s) 363, 2015
DdeI CTNAG 6 cut(s) 108, 128, 270, 294, 657, 1800
DpnI GATC 4 cut(s) 243, 261, 1278, 1401
DpnII GATC 4 cut(s) 241, 259, 1276, 1399
DraI TTTAAA 1 cut(s) 1869
EaeI YGGCCR 1 cut(s) 1407
Eam1104I CTCTTC 8 cut(s) 21, 386, 723, 1107, 1257, 1263, 1784, 2007
EarI CTCTTC 8 cut(s) 21, 386, 723, 1107, 1257, 1263, 1784, 2007
EciI GGCGGA 1 cut(s) 449
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 1427, 1556
Eco24I GRGCYC 2 cut(s) 198, 498
Eco31I GGTCTC 1 cut(s) 1526
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 5 cut(s) 51, 322, 1157, 1435, 1773
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 2 cut(s) 221, 1317
Eco88I CYCGRG 1 cut(s) 1974
EcoICRI GAGCTC 1 cut(s) 196
EcoO109I RGGNCCY 2 cut(s) 1157, 1435
EcoRII CCWGG 4 cut(s) 497, 1447, 1769, 1945
EcoRV GATATC 1 cut(s) 526
EcoT14I CCWWGG 2 cut(s) 1427, 1556
EcoT22I ATGCAT 1 cut(s) 631
EcoT38I GRGCYC 2 cut(s) 198, 498
ErhI CCWWGG 2 cut(s) 1427, 1556
FalI AAGNNNNNCTT 6 cut(s) 1144, 1176, 1979, 2011, 2133, 2165
FaqI GGGAC 4 cut(s) 233, 366, 699, 1448
FauI CCCGC 2 cut(s) 83, 169
FbaI TGATCA 2 cut(s) 1276, 1399
FblI GTMKAC 1 cut(s) 604
FriOI GRGCYC 2 cut(s) 198, 498
FspBI CTAG 3 cut(s) 696, 1055, 1656
GlaI GCGC 2 cut(s) 185, 358
GsaI CCCAGC 3 cut(s) 212, 1140, 2067
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 8 cut(s) 30, 39, 84, 213, 1365, 1409, 1554, 1769
HapII CCGG 5 cut(s) 91, 325, 371, 425, 1574
HgaI GACGC 2 cut(s) 363, 2015
HhaI GCGC 2 cut(s) 186, 359
Hin1I GRCGYC 1 cut(s) 2026
Hin6I GCGC 2 cut(s) 184, 357
HinP1I GCGC 2 cut(s) 184, 357
HincII GTYRAC 2 cut(s) 283, 1015
HindII GTYRAC 2 cut(s) 283, 1015
HindIII AAGCTT 2 cut(s) 365, 1988
HinfI GANTC 3 cut(s) 94, 437, 2210
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 5 cut(s) 91, 325, 371, 425, 1574
HphI GGTGA 6 cut(s) 329, 391, 419, 1055, 1589, 2044
Hpy166II GTNNAC 4 cut(s) 54, 283, 605, 1015
Hpy188I TCNGA 5 cut(s) 25, 131, 246, 679, 2185
Hpy188III TCNNGA 8 cut(s) 199, 325, 1280, 1335, 1523, 1846, 1976, 2214
Hpy8I GTNNAC 4 cut(s) 54, 283, 605, 1015
Hpy99I CGWCG 2 cut(s) 29, 317
HpyCH4III ACNGT 3 cut(s) 250, 609, 1641
HpyCH4IV ACGT 2 cut(s) 312, 1587
HpyF10VI GCNNNNNNNGC 5 cut(s) 36, 202, 428, 1606, 1871
HpyF3I CTNAG 6 cut(s) 108, 128, 270, 294, 657, 1800
HpySE526I ACGT 2 cut(s) 312, 1587
Hsp92I GRCGYC 1 cut(s) 2026
HspAI GCGC 2 cut(s) 184, 357
Kpn2I TCCGGA 1 cut(s) 324
Ksp22I TGATCA 2 cut(s) 1276, 1399
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 4 cut(s) 241, 259, 1276, 1399
LguI GCTCTTC 1 cut(s) 1107
LmnI GCTCC 6 cut(s) 4, 193, 201, 427, 781, 1597
Lsp1109I GCAGC 6 cut(s) 91, 193, 318, 1180, 1720, 1723
LweI GCATC 4 cut(s) 638, 1560, 1684, 1824
MaeI CTAG 3 cut(s) 696, 1055, 1656
MaeII ACGT 2 cut(s) 312, 1587
MaeIII GTNAC 3 cut(s) 620, 1475, 1577
MalI GATC 4 cut(s) 243, 261, 1278, 1401
MboI GATC 4 cut(s) 241, 259, 1276, 1399
MfeI CAATTG 1 cut(s) 469
MhlI GDGCHC 4 cut(s) 162, 198, 498, 1758
MlsI TGGCCA 1 cut(s) 1409
MluCI AATT 9 cut(s) 147, 469, 944, 1100, 1147, 1222, 1507, 2046, 2078
MluNI TGGCCA 1 cut(s) 1409
MmeI TCCRAC 2 cut(s) 48, 269
Mox20I TGGCCA 1 cut(s) 1409
Mph1103I ATGCAT 1 cut(s) 631
MroI TCCGGA 1 cut(s) 324
MscI TGGCCA 1 cut(s) 1409
MslI CAYNNNNRTG 2 cut(s) 1500, 2097
Msp20I TGGCCA 1 cut(s) 1409
MspA1I CMGCKG 2 cut(s) 298, 1171
MspCI CTTAAG 1 cut(s) 596
MspI CCGG 5 cut(s) 91, 325, 371, 425, 1574
MspR9I CCNGG 5 cut(s) 499, 1449, 1575, 1771, 1947
MunI CAATTG 1 cut(s) 469
MvaI CCWGG 4 cut(s) 499, 1449, 1771, 1947
MvnI CGCG 1 cut(s) 357
MwoI GCNNNNNNNGC 5 cut(s) 36, 202, 428, 1606, 1871
NciI CCSGG 1 cut(s) 1575
NdeII GATC 4 cut(s) 241, 259, 1276, 1399
NlaIV GGNNCC 3 cut(s) 423, 1364, 1436
NmeAIII GCCGAG 1 cut(s) 104
NmuCI GTSAC 2 cut(s) 1475, 1577
NsiI ATGCAT 1 cut(s) 631
NspI RCATGY 1 cut(s) 1908
OliI CACNNNNGTG 1 cut(s) 2097
PaeI GCATGC 1 cut(s) 1908
PaeR7I CTCGAG 1 cut(s) 1974
PagI TCATGA 1 cut(s) 2213
PaqCI CACCTGC 1 cut(s) 395
PasI CCCWGGG 1 cut(s) 498
PciSI GCTCTTC 1 cut(s) 1107
PfeI GAWTC 3 cut(s) 94, 437, 2210
PfoI TCCNGGA 1 cut(s) 1447
PpuMI RGGWCCY 2 cut(s) 1157, 1435
PshAI GACNNNNGTC 1 cut(s) 691
Psp124BI GAGCTC 1 cut(s) 198
Psp5II RGGWCCY 2 cut(s) 1157, 1435
Psp6I CCWGG 4 cut(s) 497, 1447, 1769, 1945
PspFI CCCAGC 3 cut(s) 208, 1136, 2063
PspGI CCWGG 4 cut(s) 497, 1447, 1769, 1945
PspN4I GGNNCC 3 cut(s) 423, 1364, 1436
PspPI GGNCC 9 cut(s) 29, 51, 211, 322, 1157, 1363, 1435, 1553, 1773
PspPPI RGGWCCY 2 cut(s) 1157, 1435
RseI CAYNNNNRTG 2 cut(s) 1500, 2097
SacI GAGCTC 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 1107
Sau3AI GATC 4 cut(s) 241, 259, 1276, 1399
Sau96I GGNCC 9 cut(s) 29, 51, 211, 322, 1157, 1363, 1435, 1553, 1773
ScrFI CCNGG 5 cut(s) 499, 1449, 1575, 1771, 1947
SduI GDGCHC 4 cut(s) 162, 198, 498, 1758
SfaNI GCATC 4 cut(s) 638, 1560, 1684, 1824
SfcI CTRYAG 3 cut(s) 605, 1855, 1933
SfiI GGCCNNNNNGGCC 1 cut(s) 36
Sfr274I CTCGAG 1 cut(s) 1974
SinI GGWCC 5 cut(s) 51, 322, 1157, 1435, 1773
SlaI CTCGAG 1 cut(s) 1974
SmiMI CAYNNNNRTG 2 cut(s) 1500, 2097
SmlI CTYRAG 2 cut(s) 596, 1974
SmoI CTYRAG 2 cut(s) 596, 1974
SphI GCATGC 1 cut(s) 1908
Sse9I AATT 9 cut(s) 147, 469, 944, 1100, 1147, 1222, 1507, 2046, 2078
SsiI CCGC 9 cut(s) 76, 162, 205, 298, 301, 428, 431, 434, 1171
SspI AATATT 1 cut(s) 952
SspMI CTAG 3 cut(s) 696, 1055, 1656
SstI GAGCTC 1 cut(s) 198
StyD4I CCNGG 5 cut(s) 497, 1447, 1573, 1769, 1945
StyI CCWWGG 2 cut(s) 1427, 1556
TaaI ACNGT 3 cut(s) 250, 609, 1641
TaiI ACGT 2 cut(s) 315, 1590
TaqI TCGA 9 cut(s) 386, 440, 1095, 1191, 1293, 1524, 1752, 1975, 1983
TaqII GACCGA 1 cut(s) 1790
TasI AATT 9 cut(s) 147, 469, 944, 1100, 1147, 1222, 1507, 2046, 2078
TauI GCSGC 4 cut(s) 208, 301, 431, 434
TfiI GAWTC 3 cut(s) 94, 437, 2210
TscAI CASTG 4 cut(s) 665, 1398, 1616, 1646
TseFI GTSAC 2 cut(s) 1475, 1577
TseI GCWGC 6 cut(s) 104, 181, 306, 1168, 1708, 1711
Tsp45I GTSAC 2 cut(s) 1475, 1577
TspDTI ATGAA 8 cut(s) 565, 1172, 1272, 1319, 1512, 1718, 1738, 2172
TspRI CASTG 4 cut(s) 665, 1398, 1616, 1646
Vha464I CTTAAG 1 cut(s) 596
VpaK11BI GGWCC 5 cut(s) 51, 322, 1157, 1435, 1773
XapI RAATTY 3 cut(s) 944, 1100, 2078
XceI RCATGY 1 cut(s) 1908
XcmI CCANNNNNNNNNTGG 1 cut(s) 1373
XhoI CTCGAG 1 cut(s) 1974
XmiI GTMKAC 1 cut(s) 604
XspI CTAG 3 cut(s) 696, 1055, 1656
Zsp2I ATGCAT 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.