Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Reverse (-)

54149225 .. 54154031

Gene Structure 4807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034768

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGCCGCCTTAGTTGGCGCCTCCCTTATGGCCATCTCCGCCTTCTACATCCACAAACGCAGCGTTGACCAAGTCATCGACCGCCTCACTGAGATCCGCCGCAAGCCGCCGTCTCGCATCCTCTTCGAAGACAACGACGACGACAACGAAGATTACATCGAAGAAGACGAGCAAAAGCTACAGCAGCACCGAGGGGTTGGCTCTGACCGCGACACTGTGATTGATCGGAAAACGACGTCGTCTAGGTCCTTGGATGAGAAATTGATTCACGGCGGCCGGAAAACCAGTAGCCAGAGGCAGCAGAGACCAAGACCTTCCACCTTCCACCTGAAAATCCTGACCCAATTTGTAGAAGATAACCCCAATTCTGAAATCCATTCCCACCCTCAAGTAATGGAGCAAAACCATCTTCAGTCCGACGGCCCAGATGGCCTTCCCGTCAGGTCCACGACCCTCATAACCTTCTCCCGCAGAGGCCGAAAGGGGAATCCTAAAGCTGCTCAGCAGAGACTTGAAATCCTCAGAAAAACCCTAAACCCAATTCCCTTTGTGCCGGCCAAAAACCCGAACTTGCAGCGCCATGAGGAGCTCCTGAAGCGGCTAGGCCTCTGGGACTTTCTCCACATCCAGTTTGATCCGACTGTTCGAGCTGATCTTATTGCTGAGTTGATTGTTAACTACAACCCTCAGCGGCGGTGTAGCTACGTCGGTGAGGTCCGGATTAGGGTCAGCCCTGCCGATTTGGGACGCGCATTGAAGCTTCCGGTTGGGGTGGAATCGAAGGAGAATGTGGTTGCAGATGAGGCGGCGTCGGAGGAATCGATAGCTTTGGTTGAGGATTTGGTAGGCAATTGGGTGCTTTTGCAGGAGCAGGAGCAGGAGGATGAGCCCAGGGAGGTTTTGAAGGATATCAAAGAAGGGCAGTTTGGGAATGTGGATTGGGCTGGTCTGATTTGGTTCATGGTGGAAAAGGAGTTGCTTAAGGGTCTACAGTTGGGGGATTGTTACTATGCATCGCATTTGCAGTTATTGATAAAATCTCAGTGCGAGAGTTTGTTTTCGGAGAAGGGACAAGGGTCTGGGGTGGAGATTGAGTTGAAGGAGGACGGGGAAGAGGATGGTAGTATAATGGGTGGGGAGGATGATCTTCAGGGAGGCAGATTGGAGGAGCACGGTATTAAACTATGTCTTGGGGAAGAAAATGTGGAGAAATGTTATATCGAGCAAGAAAATAAAGAAAAAGTTGATGTTGAGCAAGAAAATGTTGAGAAATTTAATAATGAGCAGGAACATGTGGAGGAAGTTGATGTTGAGCAAGAAAATGTGGAGGAAGTTGATGTTGAGCAGGACAATGTCGAGGAACTTGATGTTGAGCAGGAAAATGTTGAGAAATTTAATATTGAACAGGAAAATGTGGAGGAACTTGATGTTGACCAAGAAAATGTGGAGAAAGTTGATGTTGACCAAGAAAATGTGGAGAAAGTTATAGGTCAAAGTGTGCTAGTTGAGGATGAGGATGAGGATGAGGATGTAATGGATGTCGAAGAATTTAAGGAGGAGGAGCCTACCCAATGGCTTTTGACTGGGAAGGACAATTTAAAAGGACCTTGTTTGCAGCGGTGCAATCTTCATGGGGTCGAGGATTTGGGTTGTGGGGATGAGAGAAAAAATTATATGGAGTTGGGAGAAGAAGGAGATGAAGAAGAGGAAGAGGATGATCAGGAGGGAGGCTTCGACCTTTCAATGAAGGGTTTTTCTTTGGAGGGGTTGTCTTCAGGAAGTCTTATGCAGGTCCTGGAAGGGGGCCATATCCCTCTTGGCTCTGGTATGCCACTGCATGATCATTTGGGCACAGATTTTCCTTCATCAAGGTGGGACCTAATGATTCCTGGAAGTTCCTCACTTTCTGGTAATGGTCACAAGAGAGAGTTTAGCCATGAAAATGATAATTCTGATCATGGTCTCGATGGTAATAAGAGGTTGAGGACTGATGGCCCTTGGCATAGTAAGATGCCGGGTGACTTTGACGTGTGCATGGAGCATATACAGCAGTGGATGCGGAAAATGGAGGATATACAACAGTGGATGGGGAAAGCTAGGATAATGTATGTGGCAAAAGAACAGGAGTGTGAAGACGCTAAAATGAAGCAGCAGTTATTACTGGTAGAGTTGCAGAAAAGGGATGAGTTCATTGAGCACTTGCACAAGGCCAGGACCGAAGAGCAGCAGAAGAGACAAACTGAGAAGTATAGGTTTGAGCATGAGGTTTATTTGATGCAAAATCTCTTGAATGGCTATAGGAAGGCTTTAAAGGCAACACAAAAGGCATTTGCTGAATATAAAGCACGCAGTCCACAGGCAGATGAGCCACTCTATAGAGATGTTCCTGGTTCTGGGGGTCTTGTTTTAAGCGCTCGAGAACTCGAAAAGCTTCGCTTAAAGCAAGAAGAAGAAGATAGGATGAGGCGTCTGGTGATTGAAACAAAAATTAAGGACTTTGAAGCTGAGTGGATTAGCAAATTTGAAGCACACCACAAGAGTGTTGAAGTAAGACACCAGAACATACTCCAACTGAATCATGAGATGCTCGGTTGGGGAGTGTTCAATTCTACAAATTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

875

Amino Acids

100.51

Weight (kDa)

4.72

Isoelectric Point (pI)

59.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	239
Acc36I	ACCTGC	1 cut(s)	1780
AccB1I	GGYRCC	1 cut(s)	17
AccI	GTMKAC	1 cut(s)	988
AccII	CGCG	2 cut(s)	210, 750
AccIII	TCCGGA	1 cut(s)	717
AclWI	GGATC	2 cut(s)	88, 629
AcoI	YGGCCR	4 cut(s)	3, 30, 274, 555
AcsI	RAATTY	5 cut(s)	1271, 1391, 1547, 2519, 2614
AcuI	CTGAAG	4 cut(s)	395, 614, 1133, 1758
AcyI	GRCGYC	4 cut(s)	18, 236, 809, 2467
AfeI	AGCGCT	1 cut(s)	2413
AfiI	CCNNNNNNNGG	3 cut(s)	724, 1801, 2393
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	2 cut(s)	1291, 2028
AjiI	CACGTC	1 cut(s)	2029
AjnI	CCWGG	5 cut(s)	890, 1794, 1888, 2210, 2386
AjuI	GAANNNNNNNTTGG	2 cut(s)	909, 941
AleI	CACNNNNGTG	1 cut(s)	2538
Alw21I	GWGCWC	3 cut(s)	591, 1173, 2199
Alw26I	GTCTC	5 cut(s)	117, 298, 502, 1967, 2227
AlwI	GGATC	2 cut(s)	88, 629
AlwNI	CAGNNNCTG	1 cut(s)	1795
Ama87I	CYCGRG	1 cut(s)	2415
Aor13HI	TCCGGA	1 cut(s)	717
Aor51HI	AGCGCT	1 cut(s)	2413
ApeKI	GCWGC	8 cut(s)	60, 184, 298, 497, 574, 1615, 2149, 2224
ApoI	RAATTY	5 cut(s)	1271, 1391, 1547, 2519, 2614
Asp700I	GAANNNNTTC	1 cut(s)	2430
AspLEI	GCGC	4 cut(s)	20, 579, 752, 2414
AsuC2I	CCSGG	1 cut(s)	2016
AsuHPI	GGTGA	3 cut(s)	722, 2030, 2485
AsuII	TTCGAA	1 cut(s)	126
AvaI	CYCGRG	1 cut(s)	2415
AvaII	GGWCC	7 cut(s)	246, 444, 715, 1604, 1792, 1876, 2214
BaeGI	GKGCMC	1 cut(s)	1853
BalI	TGGCCA	1 cut(s)	32
BanI	GGYRCC	1 cut(s)	17
BanII	GRGCYC	2 cut(s)	591, 891
BbsI	GAAGAC	4 cut(s)	135, 171, 1764, 2139
Bbv12I	GWGCWC	3 cut(s)	591, 1173, 2199
BbvCI	CCTCAGC	1 cut(s)	687
BbvI	GCAGC	8 cut(s)	72, 196, 310, 484, 586, 1627, 2161, 2236
BccI	CCATC	7 cut(s)	41, 414, 422, 1112, 1961, 1985, 2080
BceAI	ACGGC	3 cut(s)	94, 286, 436
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	5 cut(s)	892, 1796, 1890, 2212, 2388
BclI	TGATCA	3 cut(s)	1717, 1840, 1954
BcnI	CCSGG	1 cut(s)	2016
BcoDI	GTCTC	5 cut(s)	117, 298, 502, 1967, 2227
BfaI	CTAG	4 cut(s)	243, 602, 1502, 2097
BfmI	CTRYAG	4 cut(s)	179, 989, 2296, 2374
BfoI	RGCGCY	3 cut(s)	21, 580, 2415
BfrI	CTTAAG	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	1780
BglI	GCCNNNNNGGC	1 cut(s)	429
BlpI	GCTNAGC	1 cut(s)	501
Bme1390I	CCNGG	6 cut(s)	892, 1796, 1890, 2016, 2212, 2388
Bme18I	GGWCC	7 cut(s)	246, 444, 715, 1604, 1792, 1876, 2214
BmeT110I	CYCGRG	1 cut(s)	2415
BmgBI	CACGTC	1 cut(s)	2029
BmiI	GGNNCC	4 cut(s)	19, 1563, 1805, 1877
BmrFI	CCNGG	6 cut(s)	892, 1796, 1890, 2016, 2212, 2388
BmrI	ACTGGG	1 cut(s)	1593
BmsI	GCATC	6 cut(s)	126, 1022, 2001, 2046, 2265, 2574
BmuI	ACTGGG	1 cut(s)	1593
BoxI	GACNNNNGTC	1 cut(s)	1075
BpiI	GAAGAC	4 cut(s)	135, 171, 1764, 2139
Bpu10I	CCTNAGC	1 cut(s)	687
Bpu1102I	GCTNAGC	1 cut(s)	501
Bpu14I	TTCGAA	1 cut(s)	126
BpuEI	CTTGAG	1 cut(s)	372
BpuMI	CCSGG	1 cut(s)	2016
Bsa29I	ATCGAT	1 cut(s)	821
BsaHI	GRCGYC	4 cut(s)	18, 236, 809, 2467
BsaI	GGTCTC	2 cut(s)	298, 1967
BsaJI	CCNNGG	5 cut(s)	190, 249, 890, 891, 1997
BsaWI	WCCGGW	2 cut(s)	717, 763
BsaXI	ACNNNNNCTCC	4 cut(s)	1079, 1109, 1754, 1784
Bsc4I	CCNNNNNNNGG	3 cut(s)	724, 1801, 2393
Bse118I	RCCGGY	1 cut(s)	553
Bse1I	ACTGG	4 cut(s)	285, 628, 1588, 2166
BseAI	TCCGGA	1 cut(s)	717
BseBI	CCWGG	5 cut(s)	892, 1796, 1890, 2212, 2388
BseCI	ATCGAT	1 cut(s)	821
BseDI	CCNNGG	5 cut(s)	190, 249, 890, 891, 1997
BseLI	CCNNNNNNNGG	3 cut(s)	724, 1801, 2393
BseMII	CTCAG	8 cut(s)	81, 515, 535, 654, 701, 1055, 2232, 2496
BseNI	ACTGG	4 cut(s)	285, 628, 1588, 2166
BseRI	GAGGAG	4 cut(s)	599, 1181, 1571, 1574
BseSI	GKGCMC	1 cut(s)	1853
BseX3I	CGGCCG	1 cut(s)	274
BseXI	GCAGC	8 cut(s)	72, 196, 310, 484, 586, 1627, 2161, 2236
Bsh1236I	CGCG	2 cut(s)	210, 750
Bsh1285I	CGRYCG	2 cut(s)	82, 277
BshNI	GGYRCC	1 cut(s)	17
BshVI	ATCGAT	1 cut(s)	821
BsiEI	CGRYCG	2 cut(s)	82, 277
BsiHKAI	GWGCWC	3 cut(s)	591, 1173, 2199
BsiHKCI	CYCGRG	1 cut(s)	2415
BsiSI	CCGG	5 cut(s)	277, 554, 718, 764, 2015
BslFI	GGGAC	4 cut(s)	626, 759, 1083, 1889
BslI	CCNNNNNNNGG	3 cut(s)	724, 1801, 2393
BsmAI	GTCTC	5 cut(s)	117, 298, 502, 1967, 2227
BsmBI	CGTCTC	1 cut(s)	117
BsmFI	GGGAC	4 cut(s)	626, 759, 1083, 1889
Bso31I	GGTCTC	2 cut(s)	298, 1967
BsoBI	CYCGRG	1 cut(s)	2415
Bsp119I	TTCGAA	1 cut(s)	126
Bsp1286I	GDGCHC	5 cut(s)	591, 891, 1173, 1853, 2199
Bsp13I	TCCGGA	1 cut(s)	717
Bsp143I	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
Bsp1720I	GCTNAGC	1 cut(s)	501
BspCNI	CTCAG	8 cut(s)	82, 514, 534, 655, 700, 1054, 2233, 2497
BspDI	ATCGAT	1 cut(s)	821
BspEI	TCCGGA	1 cut(s)	717
BspFNI	CGCG	2 cut(s)	210, 750
BspHI	TCATGA	1 cut(s)	2578
BspLI	GGNNCC	4 cut(s)	19, 1563, 1805, 1877
BspMI	ACCTGC	1 cut(s)	1780
BspPI	GGATC	2 cut(s)	88, 629
BspQI	GCTCTTC	1 cut(s)	2214
BspT104I	TTCGAA	1 cut(s)	126
BspT107I	GGYRCC	1 cut(s)	17
BspTI	CTTAAG	1 cut(s)	980
BspTNI	GGTCTC	2 cut(s)	298, 1967
BsrFI	RCCGGY	1 cut(s)	553
BsrI	ACTGG	4 cut(s)	285, 628, 1588, 2166
BssAI	RCCGGY	1 cut(s)	553
BssECI	CCNNGG	5 cut(s)	190, 249, 890, 891, 1997
BssMI	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
BssNI	GRCGYC	4 cut(s)	18, 236, 809, 2467
BssT1I	CCWWGG	2 cut(s)	249, 1997
Bst2UI	CCWGG	5 cut(s)	892, 1796, 1890, 2212, 2388
Bst4CI	ACNGT	5 cut(s)	217, 643, 993, 1175, 2082
Bst6I	CTCTTC	6 cut(s)	128, 1107, 1698, 1704, 2214, 2225
BstACI	GRCGYC	4 cut(s)	18, 236, 809, 2467
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	1 cut(s)	2056
BstBI	TTCGAA	1 cut(s)	126
BstC8I	GCNNGC	3 cut(s)	104, 555, 2347
BstDEI	CTNAG	9 cut(s)	10, 90, 501, 521, 663, 687, 1041, 2241, 2505
BstFNI	CGCG	2 cut(s)	210, 750
BstH2I	RGCGCY	3 cut(s)	21, 580, 2415
BstHHI	GCGC	4 cut(s)	20, 579, 752, 2414
BstKTI	GATC	8 cut(s)	96, 226, 637, 655, 1147, 1720, 1843, 1957
BstMAI	GTCTC	5 cut(s)	117, 298, 502, 1967, 2227
BstMBI	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
BstMCI	CGRYCG	2 cut(s)	82, 277
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 184, 207, 429, 595, 803, 2047, 2056, 2312
BstNI	CCWGG	5 cut(s)	892, 1796, 1890, 2212, 2388
BstNSI	RCATGY	1 cut(s)	1295
BstPAI	GACNNNNGTC	1 cut(s)	1075
BstSCI	CCNGG	6 cut(s)	890, 1794, 1888, 2014, 2210, 2386
BstSFI	CTRYAG	4 cut(s)	179, 989, 2296, 2374
BstSLI	GKGCMC	1 cut(s)	1853
BstUI	CGCG	2 cut(s)	210, 750
BstV1I	GCAGC	8 cut(s)	72, 196, 310, 484, 586, 1627, 2161, 2236
BstV2I	GAAGAC	4 cut(s)	135, 171, 1764, 2139
BstX2I	RGATCY	1 cut(s)	93
BstYI	RGATCY	1 cut(s)	93
BstZI	CGGCCG	1 cut(s)	274
Bsu15I	ATCGAT	1 cut(s)	821
BsuTUI	ATCGAT	1 cut(s)	821
BtgZI	GCGATG	1 cut(s)	999
BtrI	CACGTC	1 cut(s)	2029
BtsI	GCAGTG	2 cut(s)	1832, 2057
BtsIMutI	CAGTG	6 cut(s)	87, 213, 1049, 1832, 2057, 2087
BveI	ACCTGC	1 cut(s)	1780
Cac8I	GCNNGC	3 cut(s)	104, 555, 2347
CaiI	CAGNNNCTG	1 cut(s)	1795
CciI	TCATGA	1 cut(s)	2578
CfoI	GCGC	4 cut(s)	20, 579, 752, 2414
Cfr10I	RCCGGY	1 cut(s)	553
ClaI	ATCGAT	1 cut(s)	821
CseI	GACGC	4 cut(s)	756, 798, 2144, 2456
DdeI	CTNAG	9 cut(s)	10, 90, 501, 521, 663, 687, 1041, 2241, 2505
DinI	GGCGCC	1 cut(s)	19
DpnI	GATC	8 cut(s)	95, 225, 636, 654, 1146, 1719, 1842, 1956
DpnII	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
DraI	TTTAAA	2 cut(s)	1599, 2310
EaeI	YGGCCR	4 cut(s)	3, 30, 274, 555
EagI	CGGCCG	1 cut(s)	274
Eam1104I	CTCTTC	6 cut(s)	128, 1107, 1698, 1704, 2214, 2225
EarI	CTCTTC	6 cut(s)	128, 1107, 1698, 1704, 2214, 2225
EciI	GGCGGA	2 cut(s)	28, 86
Ecl136II	GAGCTC	1 cut(s)	589
EclXI	CGGCCG	1 cut(s)	274
Eco130I	CCWWGG	2 cut(s)	249, 1997
Eco147I	AGGCCT	1 cut(s)	606
Eco24I	GRGCYC	2 cut(s)	591, 891
Eco31I	GGTCTC	2 cut(s)	298, 1967
Eco32I	GATATC	1 cut(s)	910
Eco47I	GGWCC	7 cut(s)	246, 444, 715, 1604, 1792, 1876, 2214
Eco47III	AGCGCT	1 cut(s)	2413
Eco52I	CGGCCG	1 cut(s)	274
Eco53kI	GAGCTC	1 cut(s)	589
Eco57I	CTGAAG	4 cut(s)	395, 614, 1133, 1758
Eco88I	CYCGRG	1 cut(s)	2415
EcoICRI	GAGCTC	1 cut(s)	589
EcoO109I	RGGNCCY	4 cut(s)	246, 1604, 1792, 1876
EcoRII	CCWGG	5 cut(s)	890, 1794, 1888, 2210, 2386
EcoRV	GATATC	1 cut(s)	910
EcoT14I	CCWWGG	2 cut(s)	249, 1997
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	2 cut(s)	591, 891
EgeI	GGCGCC	1 cut(s)	19
EheI	GGCGCC	1 cut(s)	19
ErhI	CCWWGG	2 cut(s)	249, 1997
Esp3I	CGTCTC	1 cut(s)	117
FalI	AAGNNNNNCTT	2 cut(s)	2420, 2452
FaqI	GGGAC	4 cut(s)	626, 759, 1083, 1889
FauI	CCCGC	1 cut(s)	476
FbaI	TGATCA	3 cut(s)	1717, 1840, 1954
FblI	GTMKAC	1 cut(s)	988
FriOI	GRGCYC	2 cut(s)	591, 891
FspBI	CTAG	4 cut(s)	243, 602, 1502, 2097
GlaI	GCGC	4 cut(s)	19, 578, 751, 2413
HaeII	RGCGCY	3 cut(s)	21, 580, 2415
HapII	CCGG	5 cut(s)	277, 554, 718, 764, 2015
HgaI	GACGC	4 cut(s)	756, 798, 2144, 2456
HhaI	GCGC	4 cut(s)	20, 579, 752, 2414
Hin1I	GRCGYC	4 cut(s)	18, 236, 809, 2467
Hin6I	GCGC	4 cut(s)	18, 577, 750, 2412
HinP1I	GCGC	4 cut(s)	18, 577, 750, 2412
HincII	GTYRAC	4 cut(s)	67, 676, 1432, 1462
HindII	GTYRAC	4 cut(s)	67, 676, 1432, 1462
HindIII	AAGCTT	2 cut(s)	758, 2429
HinfI	GANTC	6 cut(s)	265, 487, 776, 818, 1885, 2575
HpaI	GTTAAC	1 cut(s)	676
HpaII	CCGG	5 cut(s)	277, 554, 718, 764, 2015
HphI	GGTGA	3 cut(s)	722, 2030, 2485
Hpy166II	GTNNAC	7 cut(s)	67, 447, 676, 989, 1432, 1462, 2354
Hpy188III	TCNNGA	9 cut(s)	337, 592, 718, 1721, 1776, 1964, 2287, 2417, 2579
Hpy8I	GTNNAC	7 cut(s)	67, 447, 676, 989, 1432, 1462, 2354
Hpy99I	CGWCG	7 cut(s)	140, 143, 238, 241, 422, 710, 814
HpyCH4III	ACNGT	5 cut(s)	217, 643, 993, 1175, 2082
HpyCH4IV	ACGT	3 cut(s)	236, 705, 2028
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 184, 207, 429, 595, 803, 2047, 2056, 2312
HpyF3I	CTNAG	9 cut(s)	10, 90, 501, 521, 663, 687, 1041, 2241, 2505
HpySE526I	ACGT	3 cut(s)	236, 705, 2028
Hsp92I	GRCGYC	4 cut(s)	18, 236, 809, 2467
HspAI	GCGC	4 cut(s)	18, 577, 750, 2412
KasI	GGCGCC	1 cut(s)	17
Kpn2I	TCCGGA	1 cut(s)	717
KroI	GCCGGC	1 cut(s)	553
KroNI	GCCGGC	1 cut(s)	555
Ksp22I	TGATCA	3 cut(s)	1717, 1840, 1954
KspAI	GTTAAC	1 cut(s)	676
Kzo9I	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
LguI	GCTCTTC	1 cut(s)	2214
LmnI	GCTCC	8 cut(s)	397, 586, 594, 868, 874, 1168, 1561, 2038
Lsp1109I	GCAGC	8 cut(s)	72, 196, 310, 484, 586, 1627, 2161, 2236
LweI	GCATC	6 cut(s)	126, 1022, 2001, 2046, 2265, 2574
MaeI	CTAG	4 cut(s)	243, 602, 1502, 2097
MaeII	ACGT	3 cut(s)	236, 705, 2028
MaeIII	GTNAC	3 cut(s)	1004, 1916, 2018
MalI	GATC	8 cut(s)	95, 225, 636, 654, 1146, 1719, 1842, 1956
MboI	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
MfeI	CAATTG	1 cut(s)	850
MflI	RGATCY	1 cut(s)	93
MhlI	GDGCHC	5 cut(s)	591, 891, 1173, 1853, 2199
MlsI	TGGCCA	1 cut(s)	32
MluNI	TGGCCA	1 cut(s)	32
Mly113I	GGCGCC	1 cut(s)	18
MmeI	TCCRAC	4 cut(s)	441, 662, 792, 2593
Mox20I	TGGCCA	1 cut(s)	32
Mph1103I	ATGCAT	1 cut(s)	1015
MroI	TCCGGA	1 cut(s)	717
MroNI	GCCGGC	1 cut(s)	553
MroXI	GAANNNNTTC	1 cut(s)	2430
MscI	TGGCCA	1 cut(s)	32
MslI	CAYNNNNRTG	3 cut(s)	1870, 1941, 2538
Msp20I	TGGCCA	1 cut(s)	32
MspA1I	CMGCKG	2 cut(s)	691, 1618
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	5 cut(s)	277, 554, 718, 764, 2015
MspR9I	CCNGG	6 cut(s)	892, 1796, 1890, 2016, 2212, 2388
MunI	CAATTG	1 cut(s)	850
MvaI	CCWGG	5 cut(s)	892, 1796, 1890, 2212, 2388
MvnI	CGCG	2 cut(s)	210, 750
MwoI	GCNNNNNNNGC	9 cut(s)	38, 184, 207, 429, 595, 803, 2047, 2056, 2312
NaeI	GCCGGC	1 cut(s)	555
NarI	GGCGCC	1 cut(s)	18
NciI	CCSGG	1 cut(s)	2016
NdeII	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
NgoMIV	GCCGGC	1 cut(s)	553
NlaIV	GGNNCC	4 cut(s)	19, 1563, 1805, 1877
NmuCI	GTSAC	2 cut(s)	1916, 2018
NsiI	ATGCAT	1 cut(s)	1015
NspI	RCATGY	1 cut(s)	1295
NspV	TTCGAA	1 cut(s)	126
OliI	CACNNNNGTG	1 cut(s)	2538
PaeR7I	CTCGAG	1 cut(s)	2415
PagI	TCATGA	1 cut(s)	2578
PasI	CCCWGGG	1 cut(s)	891
PceI	AGGCCT	1 cut(s)	606
PciI	ACATGT	1 cut(s)	1291
PciSI	GCTCTTC	1 cut(s)	2214
PcsI	WCGNNNNNNNCGW	4 cut(s)	132, 144, 165, 818
PdiI	GCCGGC	1 cut(s)	555
PdmI	GAANNNNTTC	1 cut(s)	2430
PfeI	GAWTC	6 cut(s)	265, 487, 776, 818, 1885, 2575
PflFI	GACNNNGTC	3 cut(s)	71, 238, 1352
PfoI	TCCNGGA	2 cut(s)	1794, 1888
PluTI	GGCGCC	1 cut(s)	21
PpuMI	RGGWCCY	4 cut(s)	246, 1604, 1792, 1876
PscI	ACATGT	1 cut(s)	1291
PshAI	GACNNNNGTC	1 cut(s)	1075
Psp124BI	GAGCTC	1 cut(s)	591
Psp5II	RGGWCCY	4 cut(s)	246, 1604, 1792, 1876
Psp6I	CCWGG	5 cut(s)	890, 1794, 1888, 2210, 2386
PspGI	CCWGG	5 cut(s)	890, 1794, 1888, 2210, 2386
PspN4I	GGNNCC	4 cut(s)	19, 1563, 1805, 1877
PspPPI	RGGWCCY	4 cut(s)	246, 1604, 1792, 1876
PstNI	CAGNNNCTG	1 cut(s)	1795
PsuI	RGATCY	1 cut(s)	93
PsyI	GACNNNGTC	3 cut(s)	71, 238, 1352
RseI	CAYNNNNRTG	3 cut(s)	1870, 1941, 2538
SacI	GAGCTC	1 cut(s)	591
SapI	GCTCTTC	1 cut(s)	2214
Sau3AI	GATC	8 cut(s)	93, 223, 634, 652, 1144, 1717, 1840, 1954
ScrFI	CCNGG	6 cut(s)	892, 1796, 1890, 2016, 2212, 2388
SduI	GDGCHC	5 cut(s)	591, 891, 1173, 1853, 2199
SfaNI	GCATC	6 cut(s)	126, 1022, 2001, 2046, 2265, 2574
SfcI	CTRYAG	4 cut(s)	179, 989, 2296, 2374
SfiI	GGCCNNNNNGGCC	1 cut(s)	429
SfoI	GGCGCC	1 cut(s)	19
Sfr274I	CTCGAG	1 cut(s)	2415
SfuI	TTCGAA	1 cut(s)	126
SinI	GGWCC	7 cut(s)	246, 444, 715, 1604, 1792, 1876, 2214
SlaI	CTCGAG	1 cut(s)	2415
SmiMI	CAYNNNNRTG	3 cut(s)	1870, 1941, 2538
SmlI	CTYRAG	3 cut(s)	387, 980, 2415
SmoI	CTYRAG	3 cut(s)	387, 980, 2415
SseBI	AGGCCT	1 cut(s)	606
SspDI	GGCGCC	1 cut(s)	17
SspI	AATATT	1 cut(s)	1399
SspMI	CTAG	4 cut(s)	243, 602, 1502, 2097
SstI	GAGCTC	1 cut(s)	591
StuI	AGGCCT	1 cut(s)	606
StyD4I	CCNGG	6 cut(s)	890, 1794, 1888, 2014, 2210, 2386
StyI	CCWWGG	2 cut(s)	249, 1997
TaaI	ACNGT	5 cut(s)	217, 643, 993, 1175, 2082
TaiI	ACGT	3 cut(s)	239, 708, 2031
TaqII	GACCGA	1 cut(s)	2231
TauI	GCSGC	7 cut(s)	8, 102, 109, 276, 601, 694, 809
TfiI	GAWTC	6 cut(s)	265, 487, 776, 818, 1885, 2575
TscAI	CASTG	6 cut(s)	94, 220, 1049, 1839, 2057, 2087
TseFI	GTSAC	2 cut(s)	1916, 2018
TseI	GCWGC	8 cut(s)	60, 184, 298, 497, 574, 1615, 2149, 2224
Tsp45I	GTSAC	2 cut(s)	1916, 2018
TspDTI	ATGAA	8 cut(s)	949, 1619, 1713, 1760, 1854, 1953, 2159, 2179
TspRI	CASTG	6 cut(s)	94, 220, 1049, 1839, 2057, 2087
Tth111I	GACNNNGTC	3 cut(s)	71, 238, 1352
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	7 cut(s)	246, 444, 715, 1604, 1792, 1876, 2214
XapI	RAATTY	5 cut(s)	1271, 1391, 1547, 2519, 2614
XceI	RCATGY	1 cut(s)	1295
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1814
XhoI	CTCGAG	1 cut(s)	2415
XmiI	GTMKAC	1 cut(s)	988
XmnI	GAANNNNTTC	1 cut(s)	2430
XspI	CTAG	4 cut(s)	243, 602, 1502, 2097
ZraI	GACGTC	1 cut(s)	237
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.