Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002771

Physical Location & Seq

Genomic Coordinates Forward (+)

41391448 .. 41393814

Gene Structure 2367 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00115160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGACCCAAGTCGAAGGAGAGGAGGAACCACAGAACCCTGATTCCCAATTTGAAACACTCACCCTTCAACCCCCTACACAACCACAAATGAAGCCTCAACCCGACTCAAACCAAGACAACCCCGACGCCTTCCCCGTCCGATCTCCTCGGAGCCGGACCGCCATAACCTTCGCTCGCAAGAAGCGCAAGAAGACGGGCAGGAATCCGAAAGCCGCTCAGAAGAAGCTGGAGATTCTGCGCCAAACCCTAAAGCCAATCCCCTTCGTCCCTGCCAAAACCCTAGACTTCGAGCGCCACGAGGAGCTCCTGAAGCGGCTGGGCTTGTGGGACTTCGTCCACATCAAGTTCGATCGGAGCATTAGGGCTGATCTCCTCGCCCAATTGATCGTCAACTTCAACTCCCAGCAGCGGTGTAGCTACGTCAACGAGCTTAGGATTCTGGTCAACCGGTCCGATCTGGGACGCGCATTGAAGCTTCCGGTGATGCTCAAGTCCAAGAAGAGCGCCGTGGAAGATGCCGGCGAGGAGCAGCCGGCGGCGTCGGAGGAGTCGATAGCCTTTCTGGAGGATTTGGTTTCGAATTGGATGCTTTTGCACGGGGATATGTGGATGATGCCGAGCGAGGTGTTGAGTTATAGCAAAGCAATCAAAGAAGGTCAGTTTGGGAAGGTGGACTGGGCTGGTTTGGTTTGGTACATGGTGAATGAGGAGCTAGGTAAGGCCACGCAGTTGGAGAATTGTTACTATGCGTCGCATTTGCAGCATTTGATCAAGTCGCAGAAGGAGGATTTGTTTTTGGTGAAGCAAGAGTCGAAAGTGGAGATTGATTTGAAGGATGATGATGAGGAAGAAGAGGAAGAGGATGGTGGTGGGGATGTGAAAATGGATGATGTTCAGGGAGGCAGATTGGAGGAGACTGATATTAAGTTGTGTCTCGGGCAAGAAAATGTGACCAAACTTGAGGTTGAGCACGAAAACTTGGAGAAAGTTGATGTTGAGCAAGAGAATGTGGAGAGTGTTGATGATGAGCGAGAAGATGCGGAGAAAGTTGATGTTGGGAAAGAGAATGTGGAGAAAGTTGATGTCGGGCAAGACAGGGTTGAGGAAGTTGAGGGGGAGCAAGAAAATGTGGAGAAAGTTGATTCTCAGCAAGGAAATGTGCAGAAAGTTGACTTTGGAGAAGACAATGTTGAGAAAGTTTGTGGTGAAACAGAGCGGGTTGAGGTTGAGGTTGAGGATGTGATGGATTTTGAAGAATTTAAGGAGGCAGAGCCTGCCCAATGGGTTTTGGCTGGGAAGGACAATCTAGATGAGCCTTGTTTGCAGCGGTGCAATCTCGGTGGTATTAAGGATCTTGGATGTGGGGATGAGAGAAATAAAATTGAGTTGGGAGAAGGAGTAGGTGAAGAAGAACAAGAAGATGATGAAATAGAGGAAGAGGAAGAGGAGGATGATGATCAGGATGGTGGTTTCCACCTTTTGTCTAAAGGTTTTTCTTTAGAGGGGTTTCCTTCAGGAAATCTTACTCAGGGTATGGATGGTATGCCACTGCGTGATCATTTTGGCATAGAATTTCCTTCTCCAAGGGACCTAATGCTTCCCGGAAGTTCTTCCATTTATGGTAATGGTCCCAAGAGAGAGATTAACCATGACAATGATAGTTCTCATCATGGTCTCAATGGTAATAAGAGGTTGAGGACTGATGGCTCTTGGGATAGTAAAATGTCTGGTGACTTTGAGACAGGTATGGATCAAATACAGCAGTGGATGGGGAGAGTGGAGGATATGCAGCAGTGGATGGGAAAAGCTAGGATGATGTATGCAGCAAAAGAACAGGAGTGCCAACAATCTGCAAATAACCAGCAGTATTTTATGCAAGAGGTGCAGAGAAGGGATGAGATGATTGAGCACTTGCATAAGGCCAGGTTTGAAGACCAGCAAAAGTTTCAAACAGAGAAGTTTAGGTTTGAGCATGAGGTCCACTTGATGAAAAATCTCTTGGATGGCTATAGGAAAGCTTTAAAGGCAACACAAAAGGCATTTGCTGAACATAGAGCACATTATCCACAGGCCGTTGAGCCACTCTACAGGGATGTTCCGGGATCCGGGGGCCTTGTTTTAAGCACCACAGAACTGGAAAAGCTACGCATAAAGCAAGAAGAAGAAGAGAGGATGAATAGACTGGCGATTGAAACGATGATTAAGGACTTTGAAGCTGGGTGGATTAGCGAATATGAAGCACACCAAAAGAGTGTTGAATTAGCTAGTAGCAGGTTGATGGATTTTGAGAAGGAAGTGAAACTTCTCAAGGAAGGCCTTTCAAAACAGAGGCTTCCAGAAGCACAAGAATCTCCAAATGAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

788

Amino Acids

90.41

Weight (kDa)

4.66

Isoelectric Point (pI)

54.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42370 AT3G58110 AT3G58110
fragaria_vesca	FvH4_3g11260 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000 FvH4_6g27000
malus_domestica	MD09G1139300.v1.1 MD17G1128800.v1.1
prunus_persica	Prupe.8G044600_v2.0.a1 Prupe.8G044600_v2.0.a1
pyrus_communis	pycom09g05990
rosa_chinensis	RchiOBHm_Chr2g0128861 RchiOBHm_Chr5g0053351
rosa_laevigata	RLG00000019034 RLG00000034768
rosa_multiflora	Rmu_co8379445.1_g000001 Rmu_co8380183.1_g000001 Rmu_sc0001643.1_g000032 Rmu_sc0001966.1_g000005 Rmu_sc0038988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029080 Rroxscaffold_2G00115160
rosa_rugosa	Rorug02G0281900 Rorug02G0282000 Rorug05G0267400
rosa_samantha	Rh2AG334400 Rh2BG342400 Rh2CG321300 Rh2DG359100 Rh5AG339900 Rh5BG350300 Rh5CG376800 Rh5DG364400
rosa_wichuraiana	Rw2G027050 Rw5G032100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2262
AccBSI	CCGCTC	2 cut(s)	215, 1216
AccII	CGCG	1 cut(s)	465
AciI	CCGC	8 cut(s)	159, 213, 313, 409, 536, 1040, 1216, 1327
AclWI	GGATC	4 cut(s)	1359, 1758, 2097, 2110
AcsI	RAATTY	2 cut(s)	1256, 1571
AcuI	CTGAAG	2 cut(s)	329, 1497
AcyI	GRCGYC	2 cut(s)	126, 539
AdeI	CACNNNGTG	1 cut(s)	1553
AfaI	GTAC	1 cut(s)	695
AfiI	CCNNNNNNNGG	2 cut(s)	408, 2105
AgeI	ACCGGT	1 cut(s)	447
AjnI	CCWGG	1 cut(s)	1922
AjuI	GAANNNNNNNTTGG	4 cut(s)	645, 677, 1982, 2014
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
Alw21I	GWGCWC	4 cut(s)	306, 972, 1911, 2059
Alw26I	GTCTC	4 cut(s)	908, 938, 1679, 1733
AlwI	GGATC	4 cut(s)	1359, 1758, 2097, 2110
AlwNI	CAGNNNCTG	1 cut(s)	1274
Ama87I	CYCGRG	1 cut(s)	935
AoxI	GGCC	5 cut(s)	720, 1920, 2070, 2110, 2314
ApeKI	GCWGC	6 cut(s)	406, 529, 760, 1324, 1789, 1823
ApoI	RAATTY	2 cut(s)	1256, 1571
AsiGI	ACCGGT	1 cut(s)	447
Asp700I	GAANNNNTTC	1 cut(s)	1609
AspLEI	GCGC	5 cut(s)	186, 240, 294, 467, 506
AspS9I	GGNCC	6 cut(s)	156, 450, 1588, 1628, 1978, 2110
AsuC2I	CCSGG	3 cut(s)	1602, 2100, 2107
AsuHPI	GGTGA	7 cut(s)	52, 493, 712, 811, 1217, 1415, 1742
AsuII	TTCGAA	1 cut(s)	578
AvaI	CYCGRG	1 cut(s)	935
AvaII	GGWCC	5 cut(s)	156, 450, 1588, 1628, 1978
BamHI	GGATCC	1 cut(s)	2102
BanII	GRGCYC	1 cut(s)	306
BauI	CACGAG	1 cut(s)	296
BbsI	GAAGAC	3 cut(s)	197, 1188, 1938
Bbv12I	GWGCWC	4 cut(s)	306, 972, 1911, 2059
BbvI	GCAGC	6 cut(s)	418, 541, 772, 1336, 1801, 1835
BccI	CCATC	9 cut(s)	857, 1237, 1457, 1532, 1697, 1762, 1792, 1997, 2272
BceAI	ACGGC	2 cut(s)	491, 2057
BcgI	CGANNNNNNTGC	2 cut(s)	568, 602
BciT130I	CCWGG	1 cut(s)	1924
BclI	TGATCA	3 cut(s)	768, 1456, 1555
BcnI	CCSGG	3 cut(s)	1602, 2100, 2107
BcoDI	GTCTC	4 cut(s)	908, 938, 1679, 1733
BfaI	CTAG	5 cut(s)	281, 713, 1307, 1809, 2265
BfmI	CTRYAG	2 cut(s)	2008, 2086
BfoI	RGCGCY	2 cut(s)	295, 507
BfuAI	ACCTGC	1 cut(s)	2262
BisI	GCNGC	9 cut(s)	213, 314, 407, 530, 537, 761, 1325, 1790, 1824
BlsI	GCNGC	9 cut(s)	214, 315, 408, 531, 538, 762, 1326, 1791, 1825
Bme1390I	CCNGG	4 cut(s)	1602, 1924, 2100, 2107
Bme18I	GGWCC	5 cut(s)	156, 450, 1588, 1628, 1978
BmeT110I	CYCGRG	1 cut(s)	935
BmgT120I	GGNCC	6 cut(s)	156, 450, 1588, 1628, 1978, 2110
BmiI	GGNNCC	6 cut(s)	27, 152, 1589, 1630, 2104, 2111
BmrFI	CCNGG	4 cut(s)	1602, 1924, 2100, 2107
BmrI	ACTGGG	1 cut(s)	685
BmsI	GCATC	5 cut(s)	474, 505, 576, 603, 1027
BmuI	ACTGGG	1 cut(s)	685
BoxI	GACNNNNGTC	1 cut(s)	8
BpiI	GAAGAC	3 cut(s)	197, 1188, 1938
BpmI	CTGGAG	2 cut(s)	248, 584
Bpu10I	CCTNAGC	1 cut(s)	431
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	3 cut(s)	473, 980, 2291
BpuMI	CCSGG	3 cut(s)	1602, 2100, 2107
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaHI	GRCGYC	2 cut(s)	126, 539
BsaI	GGTCTC	1 cut(s)	1679
BsaJI	CCNNGG	4 cut(s)	146, 507, 1583, 2106
BsaWI	WCCGGW	2 cut(s)	447, 478
BsaXI	ACNNNNNCTCC	6 cut(s)	383, 413, 776, 806, 1383, 1413
Bsc4I	CCNNNNNNNGG	2 cut(s)	408, 2105
Bse118I	RCCGGY	3 cut(s)	447, 518, 532
Bse1I	ACTGG	3 cut(s)	680, 2139, 2187
Bse8I	GATNNNNATC	1 cut(s)	1455
BseBI	CCWGG	1 cut(s)	1924
BseDI	CCNNGG	4 cut(s)	146, 507, 1583, 2106
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	2 cut(s)	408, 2105
BseMII	CTCAG	3 cut(s)	230, 1160, 1541
BseNI	ACTGG	3 cut(s)	680, 2139, 2187
BseRI	GAGGAG	9 cut(s)	35, 135, 314, 362, 539, 560, 722, 926, 1460
BseXI	GCAGC	6 cut(s)	418, 541, 772, 1336, 1801, 1835
BseYI	CCCAGC	4 cut(s)	316, 402, 1292, 2216
BsgI	GTGCAG	2 cut(s)	1181, 1904
Bsh1236I	CGCG	1 cut(s)	465
Bsh1285I	CGRYCG	1 cut(s)	352
BshFI	GGCC	5 cut(s)	722, 1922, 2072, 2112, 2316
BshTI	ACCGGT	1 cut(s)	447
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	4 cut(s)	306, 972, 1911, 2059
BsiHKCI	CYCGRG	1 cut(s)	935
BsiSI	CCGG	8 cut(s)	154, 448, 479, 519, 533, 1602, 2099, 2106
BslFI	GGGAC	5 cut(s)	251, 341, 474, 1601, 1614
BslI	CCNNNNNNNGG	2 cut(s)	408, 2105
BsmAI	GTCTC	4 cut(s)	908, 938, 1679, 1733
BsmFI	GGGAC	5 cut(s)	251, 341, 474, 1601, 1614
BsnI	GGCC	5 cut(s)	722, 1922, 2072, 2112, 2316
Bso31I	GGTCTC	1 cut(s)	1679
BsoBI	CYCGRG	1 cut(s)	935
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1286I	GDGCHC	4 cut(s)	306, 972, 1911, 2059
BspACI	CCGC	8 cut(s)	159, 213, 313, 409, 536, 1040, 1216, 1327
BspANI	GGCC	5 cut(s)	722, 1922, 2072, 2112, 2316
BspCNI	CTCAG	3 cut(s)	229, 1159, 1540
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	2363
BspLI	GGNNCC	6 cut(s)	27, 152, 1589, 1630, 2104, 2111
BspMI	ACCTGC	1 cut(s)	2262
BspPI	GGATC	4 cut(s)	1359, 1758, 2097, 2110
BspQI	GCTCTTC	1 cut(s)	494
BspT104I	TTCGAA	1 cut(s)	578
BspTNI	GGTCTC	1 cut(s)	1679
BsrBI	CCGCTC	2 cut(s)	215, 1216
BsrFI	RCCGGY	3 cut(s)	447, 518, 532
BsrI	ACTGG	3 cut(s)	680, 2139, 2187
BssAI	RCCGGY	3 cut(s)	447, 518, 532
BssECI	CCNNGG	4 cut(s)	146, 507, 1583, 2106
BssNI	GRCGYC	2 cut(s)	126, 539
BssSI	CACGAG	1 cut(s)	296
BssT1I	CCWWGG	1 cut(s)	1583
Bst2BI	CACGAG	1 cut(s)	296
Bst2UI	CCWGG	1 cut(s)	1924
Bst6I	CTCTTC	6 cut(s)	494, 846, 852, 1431, 1437, 2160
BstACI	GRCGYC	2 cut(s)	126, 539
BstAPI	GCANNNNNTGC	2 cut(s)	1274, 1882
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	4 cut(s)	175, 520, 534, 1275
BstDEI	CTNAG	4 cut(s)	216, 431, 1146, 1527
BstDSI	CCRYGG	1 cut(s)	507
BstFNI	CGCG	1 cut(s)	465
BstH2I	RGCGCY	2 cut(s)	295, 507
BstHHI	GCGC	5 cut(s)	186, 240, 294, 467, 506
BstMAI	GTCTC	4 cut(s)	908, 938, 1679, 1733
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1882, 2024
BstNI	CCWGG	1 cut(s)	1924
BstPAI	GACNNNNGTC	1 cut(s)	8
BstSCI	CCNGG	4 cut(s)	1600, 1922, 2098, 2105
BstSFI	CTRYAG	2 cut(s)	2008, 2086
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	6 cut(s)	418, 541, 772, 1336, 1801, 1835
BstV2I	GAAGAC	3 cut(s)	197, 1188, 1938
BstX2I	RGATCY	2 cut(s)	1351, 2102
BstXI	CCANNNNNNTGG	2 cut(s)	730, 2134
BstYI	RGATCY	2 cut(s)	1351, 2102
BsuRI	GGCC	5 cut(s)	722, 1922, 2072, 2112, 2316
BtgI	CCRYGG	1 cut(s)	507
BtsI	GCAGTG	3 cut(s)	1547, 1769, 1799
BtsIMutI	CAGTG	3 cut(s)	1547, 1769, 1799
BveI	ACCTGC	1 cut(s)	2262
Cac8I	GCNNGC	4 cut(s)	175, 520, 534, 1275
CaiI	CAGNNNCTG	1 cut(s)	1274
CciI	TCATGA	1 cut(s)	2363
CfoI	GCGC	5 cut(s)	186, 240, 294, 467, 506
Cfr10I	RCCGGY	3 cut(s)	447, 518, 532
Cfr13I	GGNCC	6 cut(s)	156, 450, 1588, 1628, 1978, 2110
CpoI	CGGWCCG	2 cut(s)	156, 450
CseI	GACGC	4 cut(s)	134, 471, 528, 738
Csp6I	GTAC	1 cut(s)	694
CspAI	ACCGGT	1 cut(s)	447
CspCI	CAANNNNNGTGG	2 cut(s)	1321, 1356
CspI	CGGWCCG	2 cut(s)	156, 450
CviAII	CATG	5 cut(s)	697, 1649, 1670, 1973, 2364
CviQI	GTAC	1 cut(s)	694
DdeI	CTNAG	4 cut(s)	216, 431, 1146, 1527
DraI	TTTAAA	1 cut(s)	2022
DraIII	CACNNNGTG	1 cut(s)	1553
Eam1104I	CTCTTC	6 cut(s)	494, 846, 852, 1431, 1437, 2160
EarI	CTCTTC	6 cut(s)	494, 846, 852, 1431, 1437, 2160
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	1 cut(s)	1583
Eco147I	AGGCCT	1 cut(s)	2316
Eco24I	GRGCYC	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	1679
Eco47I	GGWCC	5 cut(s)	156, 450, 1588, 1628, 1978
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	2 cut(s)	329, 1497
Eco88I	CYCGRG	1 cut(s)	935
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	1588, 2110
EcoRII	CCWGG	1 cut(s)	1922
EcoT14I	CCWWGG	1 cut(s)	1583
EcoT38I	GRGCYC	1 cut(s)	306
ErhI	CCWWGG	1 cut(s)	1583
FaeI	CATG	5 cut(s)	700, 1652, 1673, 1976, 2367
FalI	AAGNNNNNCTT	2 cut(s)	2286, 2318
FaqI	GGGAC	5 cut(s)	251, 341, 474, 1601, 1614
FatI	CATG	5 cut(s)	696, 1648, 1669, 1972, 2363
FauI	CCCGC	1 cut(s)	1209
FbaI	TGATCA	3 cut(s)	768, 1456, 1555
Fnu4HI	GCNGC	9 cut(s)	213, 314, 407, 530, 537, 761, 1325, 1790, 1824
FriOI	GRGCYC	1 cut(s)	306
Fsp4HI	GCNGC	9 cut(s)	213, 314, 407, 530, 537, 761, 1325, 1790, 1824
FspBI	CTAG	5 cut(s)	281, 713, 1307, 1809, 2265
GlaI	GCGC	5 cut(s)	185, 239, 293, 466, 505
GluI	GCNGC	9 cut(s)	213, 314, 407, 530, 537, 761, 1325, 1790, 1824
GsaI	CCCAGC	4 cut(s)	320, 406, 1296, 2220
GsuI	CTGGAG	2 cut(s)	248, 584
HaeII	RGCGCY	2 cut(s)	295, 507
HaeIII	GGCC	5 cut(s)	722, 1922, 2072, 2112, 2316
HapII	CCGG	8 cut(s)	154, 448, 479, 519, 533, 1602, 2099, 2106
HgaI	GACGC	4 cut(s)	134, 471, 528, 738
HhaI	GCGC	5 cut(s)	186, 240, 294, 467, 506
Hin1I	GRCGYC	2 cut(s)	126, 539
Hin1II	CATG	5 cut(s)	700, 1652, 1673, 1976, 2367
Hin6I	GCGC	5 cut(s)	184, 238, 292, 465, 504
HinP1I	GCGC	5 cut(s)	184, 238, 292, 465, 504
HincII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindII	GTYRAC	4 cut(s)	391, 424, 445, 1171
HindIII	AAGCTT	2 cut(s)	473, 2016
HpaII	CCGG	8 cut(s)	154, 448, 479, 519, 533, 1602, 2099, 2106
HphI	GGTGA	7 cut(s)	52, 493, 712, 811, 1217, 1415, 1742
Hpy166II	GTNNAC	7 cut(s)	337, 391, 424, 445, 673, 1171, 1981
Hpy188I	TCNGA	7 cut(s)	140, 150, 207, 219, 354, 454, 544
Hpy188III	TCNNGA	7 cut(s)	307, 563, 1307, 1460, 1515, 2336, 2364
Hpy8I	GTNNAC	7 cut(s)	337, 391, 424, 445, 673, 1171, 1981
Hpy99I	CGWCG	3 cut(s)	128, 544, 754
HpyCH4IV	ACGT	1 cut(s)	420
HpyF10VI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1882, 2024
HpyF3I	CTNAG	4 cut(s)	216, 431, 1146, 1527
HpySE526I	ACGT	1 cut(s)	420
Hsp92I	GRCGYC	2 cut(s)	126, 539
Hsp92II	CATG	5 cut(s)	700, 1652, 1673, 1976, 2367
HspAI	GCGC	5 cut(s)	184, 238, 292, 465, 504
KroI	GCCGGC	2 cut(s)	518, 532
KroNI	GCCGGC	2 cut(s)	520, 534
Ksp22I	TGATCA	3 cut(s)	768, 1456, 1555
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	7 cut(s)	150, 301, 309, 354, 526, 709, 1117
Lsp1109I	GCAGC	6 cut(s)	418, 541, 772, 1336, 1801, 1835
LweI	GCATC	5 cut(s)	474, 505, 576, 603, 1027
MaeI	CTAG	5 cut(s)	281, 713, 1307, 1809, 2265
MaeII	ACGT	1 cut(s)	420
MaeIII	GTNAC	3 cut(s)	740, 949, 1730
MbiI	CCGCTC	2 cut(s)	215, 1216
MfeI	CAATTG	1 cut(s)	380
MflI	RGATCY	2 cut(s)	1351, 2102
MhlI	GDGCHC	4 cut(s)	306, 972, 1911, 2059
MluCI	AATT	8 cut(s)	47, 380, 580, 736, 1256, 1380, 1571, 2258
MlyI	GAGTC	3 cut(s)	98, 557, 818
MmeI	TCCRAC	2 cut(s)	522, 711
MroNI	GCCGGC	2 cut(s)	518, 532
MroXI	GAANNNNTTC	1 cut(s)	1609
MseI	TTAA	7 cut(s)	924, 1260, 1347, 1644, 2021, 2120, 2202
MslI	CAYNNNNRTG	1 cut(s)	1653
MspA1I	CMGCKG	2 cut(s)	409, 1327
MspI	CCGG	8 cut(s)	154, 448, 479, 519, 533, 1602, 2099, 2106
MspR9I	CCNGG	4 cut(s)	1602, 1924, 2100, 2107
MunI	CAATTG	1 cut(s)	380
MvaI	CCWGG	1 cut(s)	1924
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	7 cut(s)	183, 310, 760, 1274, 1321, 1882, 2024
NaeI	GCCGGC	2 cut(s)	520, 534
NciI	CCSGG	3 cut(s)	1602, 2100, 2107
NgoMIV	GCCGGC	2 cut(s)	518, 532
NlaIII	CATG	5 cut(s)	700, 1652, 1673, 1976, 2367
NlaIV	GGNNCC	6 cut(s)	27, 152, 1589, 1630, 2104, 2111
NmeAIII	GCCGAG	1 cut(s)	642
NmuCI	GTSAC	2 cut(s)	949, 1730
NspV	TTCGAA	1 cut(s)	578
PagI	TCATGA	1 cut(s)	2363
PceI	AGGCCT	1 cut(s)	2316
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 294, 548
PdiI	GCCGGC	2 cut(s)	520, 534
PdmI	GAANNNNTTC	1 cut(s)	1609
PfeI	GAWTC	7 cut(s)	41, 202, 232, 436, 1142, 2348, 2360
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	2 cut(s)	1600, 2098
PinAI	ACCGGT	1 cut(s)	447
PkrI	GCNGC	9 cut(s)	214, 315, 408, 531, 538, 762, 1326, 1791, 1825
Ple19I	CGATCG	1 cut(s)	352
PleI	GAGTC	3 cut(s)	98, 556, 817
PpsI	GAGTC	3 cut(s)	98, 556, 817
PpuMI	RGGWCCY	1 cut(s)	1588
PshAI	GACNNNNGTC	1 cut(s)	8
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	1588
Psp6I	CCWGG	1 cut(s)	1922
PspFI	CCCAGC	4 cut(s)	316, 402, 1292, 2216
PspGI	CCWGG	1 cut(s)	1922
PspN4I	GGNNCC	6 cut(s)	27, 152, 1589, 1630, 2104, 2111
PspPI	GGNCC	6 cut(s)	156, 450, 1588, 1628, 1978, 2110
PspPPI	RGGWCCY	1 cut(s)	1588
PstNI	CAGNNNCTG	1 cut(s)	1274
PsuI	RGATCY	2 cut(s)	1351, 2102
PsyI	GACNNNGTC	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	352
RsaI	GTAC	1 cut(s)	695
RsaNI	GTAC	1 cut(s)	694
RseI	CAYNNNNRTG	1 cut(s)	1653
Rsr2I	CGGWCCG	2 cut(s)	156, 450
RsrII	CGGWCCG	2 cut(s)	156, 450
SacI	GAGCTC	1 cut(s)	306
SapI	GCTCTTC	1 cut(s)	494
SaqAI	TTAA	7 cut(s)	924, 1260, 1347, 1644, 2021, 2120, 2202
SatI	GCNGC	9 cut(s)	213, 314, 407, 530, 537, 761, 1325, 1790, 1824
Sau96I	GGNCC	6 cut(s)	156, 450, 1588, 1628, 1978, 2110
SchI	GAGTC	3 cut(s)	98, 557, 818
ScrFI	CCNGG	4 cut(s)	1602, 1924, 2100, 2107
SduI	GDGCHC	4 cut(s)	306, 972, 1911, 2059
SfaNI	GCATC	5 cut(s)	474, 505, 576, 603, 1027
SfcI	CTRYAG	2 cut(s)	2008, 2086
SfuI	TTCGAA	1 cut(s)	578
SinI	GGWCC	5 cut(s)	156, 450, 1588, 1628, 1978
SmiMI	CAYNNNNRTG	1 cut(s)	1653
SmlI	CTYRAG	3 cut(s)	488, 959, 2306
SmoI	CTYRAG	3 cut(s)	488, 959, 2306
Sse9I	AATT	8 cut(s)	47, 380, 580, 736, 1256, 1380, 1571, 2258
SseBI	AGGCCT	1 cut(s)	2316
SsiI	CCGC	8 cut(s)	159, 213, 313, 409, 536, 1040, 1216, 1327
SspMI	CTAG	5 cut(s)	281, 713, 1307, 1809, 2265
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	2316
StyD4I	CCNGG	4 cut(s)	1600, 1922, 2098, 2105
StyI	CCWWGG	1 cut(s)	1583
TaiI	ACGT	1 cut(s)	423
TaqI	TCGA	6 cut(s)	12, 288, 348, 551, 578, 812
TasI	AATT	8 cut(s)	47, 380, 580, 736, 1256, 1380, 1571, 2258
TauI	GCSGC	3 cut(s)	215, 316, 539
TfiI	GAWTC	7 cut(s)	41, 202, 232, 436, 1142, 2348, 2360
Tru1I	TTAA	7 cut(s)	924, 1260, 1347, 1644, 2021, 2120, 2202
Tru9I	TTAA	7 cut(s)	924, 1260, 1347, 1644, 2021, 2120, 2202
TscAI	CASTG	3 cut(s)	1554, 1769, 1799
TseFI	GTSAC	2 cut(s)	949, 1730
TseI	GCWGC	6 cut(s)	406, 529, 760, 1324, 1789, 1823
Tsp45I	GTSAC	2 cut(s)	949, 1730
TspDTI	ATGAA	5 cut(s)	104, 1440, 2003, 2189, 2250
TspRI	CASTG	3 cut(s)	1554, 1769, 1799
Tth111I	GACNNNGTC	1 cut(s)	332
VpaK11BI	GGWCC	5 cut(s)	156, 450, 1588, 1628, 1978
XapI	RAATTY	2 cut(s)	1256, 1571
XbaI	TCTAGA	1 cut(s)	1306
XmnI	GAANNNNTTC	1 cut(s)	1609
XspI	CTAG	5 cut(s)	281, 713, 1307, 1809, 2265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.