MD09G1210200.v1.1

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0008151
Physical Location & Seq
Reverse (-)
20300287 .. 20302931
2645 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1210200.v1.1.491

Sequence Viewer

Length: 417 bp
ATGGCTTTCGGAGTAACTATATTAGAGGCAGTTAAACTATACAAAGGACACAGTGTGATTGCGTCTCGGGCAGAATCAAACACAAATTGGAAAGTGCACCAGCTTGTTTTTTGTAGTGCTTGTGGCATCATACTGATTATAGCTGGTATATTTGGTGGATTGCTTGGTCTTGGTGGAGGCTTCATTTTAGGTCCAGTTATTCTGGAGCTAGGAATCCCACCTCAGGTCTCAAGTGCCACAGCCACATTTGCCATGACATTTTCTGCCTCCATGTCTGTTGTCGACGGGCCAAGGAATTCAGTCCAACAACACCGATATTGTCTTCAATTTGGTAATTACCATCTGCTCCATCAATCAGGTATGAGGTTTTATCACAAAATACCTTGGTATGAGTTAGAACGAGGTAATTCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

139

Amino Acids

15.03

Weight (kDa)

8.91

Isoelectric Point (pI)

36.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 43 - 99 1e-09 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 282
AcsI RAATTY 1 cut(s) 295
AdeI CACNNNGTG 1 cut(s) 55
AfiI CCNNNNNNNGG 1 cut(s) 223
AgsI TTSAA 1 cut(s) 326
AluBI AGCT 3 cut(s) 103, 143, 208
AluI AGCT 3 cut(s) 103, 143, 208
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 2 cut(s) 69, 232
Alw44I GTGCAC 1 cut(s) 95
Ama87I CYCGRG 1 cut(s) 66
AoxI GGCC 1 cut(s) 287
ApaLI GTGCAC 1 cut(s) 95
ApoI RAATTY 1 cut(s) 295
AspS9I GGNCC 2 cut(s) 191, 287
AvaI CYCGRG 1 cut(s) 66
AvaII GGWCC 1 cut(s) 191
AxyI CCTNAGG 1 cut(s) 222
BaeGI GKGCMC 1 cut(s) 99
BbsI GAAGAC 1 cut(s) 314
Bbv12I GWGCWC 1 cut(s) 99
BccI CCATC 2 cut(s) 348, 357
BcoDI GTCTC 2 cut(s) 69, 232
BfaI CTAG 1 cut(s) 209
Bme18I GGWCC 1 cut(s) 191
BmeT110I CYCGRG 1 cut(s) 66
BmgT120I GGNCC 2 cut(s) 191, 287
BmsI GCATC 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 314
BpmI CTGGAG 1 cut(s) 224
BpuEI CTTGAG 1 cut(s) 214
BsaI GGTCTC 1 cut(s) 232
BsaJI CCNNGG 2 cut(s) 290, 383
Bsc4I CCNNNNNNNGG 1 cut(s) 223
Bse1I ACTGG 1 cut(s) 194
Bse21I CCTNAGG 1 cut(s) 222
BseDI CCNNGG 2 cut(s) 290, 383
BseLI CCNNNNNNNGG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 236
BseNI ACTGG 1 cut(s) 194
BseSI GKGCMC 1 cut(s) 99
BshFI GGCC 1 cut(s) 289
BsiHKAI GWGCWC 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 66
BslI CCNNNNNNNGG 1 cut(s) 223
BsmAI GTCTC 2 cut(s) 69, 232
BsmBI CGTCTC 1 cut(s) 69
BsnI GGCC 1 cut(s) 289
Bso31I GGTCTC 1 cut(s) 232
BsoBI CYCGRG 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 99
BspANI GGCC 1 cut(s) 289
BspCNI CTCAG 1 cut(s) 235
BspTNI GGTCTC 1 cut(s) 232
BsrI ACTGG 1 cut(s) 194
BssECI CCNNGG 2 cut(s) 290, 383
BssT1I CCWWGG 2 cut(s) 290, 383
Bst4CI ACNGT 1 cut(s) 53
BstDEI CTNAG 1 cut(s) 222
BstMAI GTCTC 2 cut(s) 69, 232
BstMWI GCNNNNNNNGC 2 cut(s) 68, 248
BstSLI GKGCMC 1 cut(s) 99
BstV2I GAAGAC 1 cut(s) 314
Bsu36I CCTNAGG 1 cut(s) 222
BsuRI GGCC 1 cut(s) 289
BtsIMutI CAGTG 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 191, 287
CseI GACGC 1 cut(s) 51
CviAII CATG 2 cut(s) 253, 271
CviJI RGCY 7 cut(s) 5, 103, 143, 180, 208, 242, 289
CviKI_1 RGCY 7 cut(s) 5, 103, 143, 180, 208, 242, 289
DdeI CTNAG 1 cut(s) 222
DraIII CACNNNGTG 1 cut(s) 55
Eco130I CCWWGG 2 cut(s) 290, 383
Eco31I GGTCTC 1 cut(s) 232
Eco47I GGWCC 1 cut(s) 191
Eco81I CCTNAGG 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 66
EcoRI GAATTC 1 cut(s) 295
EcoT14I CCWWGG 2 cut(s) 290, 383
ErhI CCWWGG 2 cut(s) 290, 383
Esp3I CGTCTC 1 cut(s) 69
FaeI CATG 2 cut(s) 256, 274
FaiI YATR 9 cut(s) 20, 40, 131, 140, 149, 254, 272, 362, 390
FatI CATG 2 cut(s) 252, 270
FblI GTMKAC 1 cut(s) 282
FspBI CTAG 1 cut(s) 209
GsuI CTGGAG 1 cut(s) 224
HaeIII GGCC 1 cut(s) 289
HgaI GACGC 1 cut(s) 51
Hin1II CATG 2 cut(s) 256, 274
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HinfI GANTC 2 cut(s) 74, 213
Hpy166II GTNNAC 2 cut(s) 97, 283
Hpy188I TCNGA 1 cut(s) 11
Hpy188III TCNNGA 1 cut(s) 203
Hpy8I GTNNAC 2 cut(s) 97, 283
Hpy99I CGWCG 1 cut(s) 287
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 1 cut(s) 97
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 248
HpyF3I CTNAG 1 cut(s) 222
Hsp92II CATG 2 cut(s) 256, 274
LmnI GCTCC 2 cut(s) 205, 351
LpnPI CCDG 6 cut(s) 113, 129, 188, 207, 209, 342
LweI GCATC 1 cut(s) 135
MaeI CTAG 1 cut(s) 209
MaeIII GTNAC 1 cut(s) 13
MboII GAAGA 1 cut(s) 314
MhlI GDGCHC 1 cut(s) 99
MluCI AATT 5 cut(s) 85, 295, 326, 334, 406
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 6 cut(s) 19, 170, 231, 277, 357, 395
MseI TTAA 2 cut(s) 33, 415
MwoI GCNNNNNNNGC 2 cut(s) 68, 248
NlaIII CATG 2 cut(s) 256, 274
PfeI GAWTC 2 cut(s) 74, 213
PspPI GGNCC 2 cut(s) 191, 287
SalI GTCGAC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 33, 415
Sau96I GGNCC 2 cut(s) 191, 287
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 1 cut(s) 135
SinI GGWCC 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 229
SmoI CTYRAG 1 cut(s) 229
Sse9I AATT 5 cut(s) 85, 295, 326, 334, 406
SspMI CTAG 1 cut(s) 209
StyI CCWWGG 2 cut(s) 290, 383
TaaI ACNGT 1 cut(s) 53
TaqI TCGA 1 cut(s) 282
TasI AATT 5 cut(s) 85, 295, 326, 334, 406
TfiI GAWTC 2 cut(s) 74, 213
Tru1I TTAA 2 cut(s) 33, 415
Tru9I TTAA 2 cut(s) 33, 415
TscAI CASTG 1 cut(s) 58
TspDTI ATGAA 1 cut(s) 172
TspRI CASTG 1 cut(s) 58
VneI GTGCAC 1 cut(s) 95
VpaK11BI GGWCC 1 cut(s) 191
XapI RAATTY 1 cut(s) 295
XmiI GTMKAC 1 cut(s) 282
XspI CTAG 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.