26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g31640 |
| malus_domestica | MD01G1101600.v1.1 MD09G1210200.v1.1 MD14G1095100.v1.1 |
| pyrus_communis | pycom09g12750 pycom11g24660 pycom15g23000 |
| rosa_chinensis | RchiOBHm_Chr1g0340011 RchiOBHm_Chr1g0357081 RchiOBHm_Chr3g0486941 RchiOBHm_Chr4g0436351 |
| rosa_multiflora | Rmu_sc0006243.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00220430 Rroxscaffold_7G00210400 |
| rosa_samantha | Rh1CG218500 Rh1CG254900 Rh2DG070500 Rh5AG243700 Rh5AG243800 Rh6BG302100 Rh7AG161900 Rh7AG282400 Rh7CG016100 Rh7CG301700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 104 |
| Acc36I | ACCTGC | 2 cut(s) | 104, 199 |
| AcsI | RAATTY | 1 cut(s) | 383 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 144, 297 |
| AflIII | ACRYGT | 1 cut(s) | 274 |
| AgsI | TTSAA | 4 cut(s) | 42, 159, 200, 230 |
| AjiI | CACGTC | 1 cut(s) | 308 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 139, 171 |
| AluBI | AGCT | 2 cut(s) | 125, 266 |
| AluI | AGCT | 2 cut(s) | 125, 266 |
| ApeKI | GCWGC | 2 cut(s) | 266, 287 |
| ApoI | RAATTY | 1 cut(s) | 383 |
| AsuHPI | GGTGA | 2 cut(s) | 249, 323 |
| BbvI | GCAGC | 2 cut(s) | 253, 274 |
| BciVI | GTATCC | 1 cut(s) | 141 |
| BfuAI | ACCTGC | 2 cut(s) | 104, 199 |
| BfuI | GTATCC | 1 cut(s) | 141 |
| BisI | GCNGC | 2 cut(s) | 267, 288 |
| BlsI | GCNGC | 2 cut(s) | 268, 289 |
| BmgBI | CACGTC | 1 cut(s) | 308 |
| BmrI | ACTGGG | 1 cut(s) | 215 |
| BmuI | ACTGGG | 1 cut(s) | 215 |
| BpmI | CTGGAG | 1 cut(s) | 346 |
| BpuEI | CTTGAG | 1 cut(s) | 153 |
| BsaWI | WCCGGW | 1 cut(s) | 161 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 144, 297 |
| Bse1I | ACTGG | 2 cut(s) | 210, 324 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 144, 297 |
| BseNI | ACTGG | 2 cut(s) | 210, 324 |
| BseXI | GCAGC | 2 cut(s) | 253, 274 |
| BsiSI | CCGG | 1 cut(s) | 162 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 144, 297 |
| Bsp143I | GATC | 1 cut(s) | 18 |
| BspMI | ACCTGC | 2 cut(s) | 104, 199 |
| BsrI | ACTGG | 2 cut(s) | 210, 324 |
| BssMI | GATC | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 1 cut(s) | 219 |
| BstDEI | CTNAG | 1 cut(s) | 152 |
| BstKTI | GATC | 1 cut(s) | 21 |
| BstMBI | GATC | 1 cut(s) | 18 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 200 |
| BstNSI | RCATGY | 1 cut(s) | 278 |
| BstV1I | GCAGC | 2 cut(s) | 253, 274 |
| BsuI | GTATCC | 1 cut(s) | 141 |
| BtrI | CACGTC | 1 cut(s) | 308 |
| BtsIMutI | CAGTG | 1 cut(s) | 203 |
| BveI | ACCTGC | 2 cut(s) | 104, 199 |
| CviAII | CATG | 3 cut(s) | 26, 275, 403 |
| CviJI | RGCY | 4 cut(s) | 125, 137, 266, 366 |
| CviKI_1 | RGCY | 4 cut(s) | 125, 137, 266, 366 |
| DdeI | CTNAG | 1 cut(s) | 152 |
| DpnI | GATC | 1 cut(s) | 20 |
| DpnII | GATC | 1 cut(s) | 18 |
| Eco32I | GATATC | 1 cut(s) | 400 |
| EcoRV | GATATC | 1 cut(s) | 400 |
| FaeI | CATG | 3 cut(s) | 29, 278, 406 |
| FaiI | YATR | 8 cut(s) | 27, 128, 140, 276, 285, 379, 392, 404 |
| FatI | CATG | 3 cut(s) | 25, 274, 402 |
| Fnu4HI | GCNGC | 2 cut(s) | 267, 288 |
| Fsp4HI | GCNGC | 2 cut(s) | 267, 288 |
| GluI | GCNGC | 2 cut(s) | 267, 288 |
| GsuI | CTGGAG | 1 cut(s) | 346 |
| HapII | CCGG | 1 cut(s) | 162 |
| Hin1II | CATG | 3 cut(s) | 29, 278, 406 |
| HpaII | CCGG | 1 cut(s) | 162 |
| HphI | GGTGA | 2 cut(s) | 249, 323 |
| Hpy166II | GTNNAC | 3 cut(s) | 188, 257, 314 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 2 cut(s) | 170, 197 |
| Hpy8I | GTNNAC | 3 cut(s) | 188, 257, 314 |
| HpyAV | CCTTC | 1 cut(s) | 56 |
| HpyCH4III | ACNGT | 1 cut(s) | 219 |
| HpyCH4IV | ACGT | 2 cut(s) | 307, 356 |
| HpyCH4V | TGCA | 4 cut(s) | 52, 113, 269, 381 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 1 cut(s) | 152 |
| HpySE526I | ACGT | 2 cut(s) | 307, 356 |
| Hsp92II | CATG | 3 cut(s) | 29, 278, 406 |
| Kzo9I | GATC | 1 cut(s) | 18 |
| LmnI | GCTCC | 1 cut(s) | 233 |
| LpnPI | CCDG | 9 cut(s) | 58, 99, 130, 175, 191, 204, 276, 305, 376 |
| Lsp1109I | GCAGC | 2 cut(s) | 253, 274 |
| MaeII | ACGT | 2 cut(s) | 307, 356 |
| MaeIII | GTNAC | 1 cut(s) | 78 |
| MalI | GATC | 1 cut(s) | 20 |
| MboI | GATC | 1 cut(s) | 18 |
| MluCI | AATT | 4 cut(s) | 84, 100, 225, 383 |
| MnlI | CCTC | 1 cut(s) | 378 |
| MseI | TTAA | 1 cut(s) | 409 |
| MspA1I | CMGCKG | 1 cut(s) | 266 |
| MspI | CCGG | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 200 |
| NdeII | GATC | 1 cut(s) | 18 |
| NlaIII | CATG | 3 cut(s) | 29, 278, 406 |
| NspI | RCATGY | 1 cut(s) | 278 |
| PaqCI | CACCTGC | 1 cut(s) | 104 |
| PciI | ACATGT | 1 cut(s) | 274 |
| PkrI | GCNGC | 2 cut(s) | 268, 289 |
| PscI | ACATGT | 1 cut(s) | 274 |
| PvuII | CAGCTG | 1 cut(s) | 266 |
| SaqAI | TTAA | 1 cut(s) | 409 |
| SatI | GCNGC | 2 cut(s) | 267, 288 |
| Sau3AI | GATC | 1 cut(s) | 18 |
| SetI | ASST | 7 cut(s) | 77, 118, 127, 193, 268, 310, 359 |
| SmlI | CTYRAG | 1 cut(s) | 168 |
| SmoI | CTYRAG | 1 cut(s) | 168 |
| Sse9I | AATT | 4 cut(s) | 84, 100, 225, 383 |
| TaaI | ACNGT | 1 cut(s) | 219 |
| TaiI | ACGT | 2 cut(s) | 310, 359 |
| TaqI | TCGA | 2 cut(s) | 21, 396 |
| TasI | AATT | 4 cut(s) | 84, 100, 225, 383 |
| Tru1I | TTAA | 1 cut(s) | 409 |
| Tru9I | TTAA | 1 cut(s) | 409 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TseI | GCWGC | 2 cut(s) | 266, 287 |
| TspRI | CASTG | 1 cut(s) | 210 |
| XapI | RAATTY | 1 cut(s) | 383 |
| XceI | RCATGY | 1 cut(s) | 278 |