MD14G1095100.v1.1

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0008151
Physical Location & Seq
Reverse (-)
14333306 .. 14334352
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1095100.v1.1.491

Sequence Viewer

Length: 420 bp
ATGTTTCCCATAGCACTTGGAGTGTTTGGATATGAATCAGTGAAGCTGTGCAAAGAGCACGGGAAGAGAATGAGCACAGGGAACACAGAATCCATCTGTGAGGCTTCGATCACCTGGACTCCGGTTCACATTGCATTTTGTGCACTCTGTGGAATCTTGGGAGGCACTGTCGGGGGCTTACTTGGATCTGGTGGAGGTTTCATTCTTGGACCTCTCCTCCTTGAGATTGGTGTCATACCTCAGGTTGCCAGTGCAACTGCCACTTTTGTGATGACATTCTCATCATCTTTATCGGTCGTGGAGTTCTACTTGCTCAAGAGGTTTCCAATACCATACGGTGTAATCGGCATCAAGACAAGCATCCAAATGATAGCAAATCACGAGTTTATGGGATTCTTGGAATTCTGCAGCAGTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

140

Amino Acids

14.76

Weight (kDa)

6.26

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 48 - 104 5.4e-09 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 193
AcsI RAATTY 1 cut(s) 401
AdeI CACNNNGTG 1 cut(s) 149
AjnI CCWGG 1 cut(s) 113
AleI CACNNNNGTG 1 cut(s) 266
AloI GAACNNNNNNTCC 2 cut(s) 74, 106
AluBI AGCT 1 cut(s) 46
AluI AGCT 1 cut(s) 46
Alw21I GWGCWC 3 cut(s) 60, 77, 145
Alw44I GTGCAC 1 cut(s) 141
AlwI GGATC 1 cut(s) 193
ApaLI GTGCAC 1 cut(s) 141
ApeKI GCWGC 1 cut(s) 408
ApoI RAATTY 1 cut(s) 401
AspS9I GGNCC 1 cut(s) 209
AsuHPI GGTGA 1 cut(s) 103
AvaII GGWCC 1 cut(s) 209
AxyI CCTNAGG 1 cut(s) 240
BaeGI GKGCMC 1 cut(s) 145
BauI CACGAG 1 cut(s) 380
Bbv12I GWGCWC 3 cut(s) 60, 77, 145
BccI CCATC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 115
BfmI CTRYAG 1 cut(s) 406
BisI GCNGC 1 cut(s) 409
BlsI GCNGC 1 cut(s) 410
Bme1390I CCNGG 1 cut(s) 115
Bme18I GGWCC 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 209
BmrFI CCNGG 1 cut(s) 115
BmsI GCATC 2 cut(s) 357, 369
BpuEI CTTGAG 2 cut(s) 242, 299
BsaBI GATNNNNATC 1 cut(s) 34
BsaWI WCCGGW 1 cut(s) 121
BsaXI ACNNNNNCTCC 6 cut(s) 103, 133, 153, 183, 201, 231
Bse1I ACTGG 1 cut(s) 249
Bse21I CCTNAGG 1 cut(s) 240
Bse3DI GCAATG 1 cut(s) 129
Bse8I GATNNNNATC 1 cut(s) 34
BseBI CCWGG 1 cut(s) 115
BseGI GGATG 1 cut(s) 360
BseJI GATNNNNATC 1 cut(s) 34
BseMI GCAATG 1 cut(s) 129
BseMII CTCAG 1 cut(s) 254
BseNI ACTGG 1 cut(s) 249
BseRI GAGGAG 1 cut(s) 206
BseSI GKGCMC 1 cut(s) 145
Bsh1285I CGRYCG 1 cut(s) 297
BsiEI CGRYCG 1 cut(s) 297
BsiHKAI GWGCWC 3 cut(s) 60, 77, 145
BsiSI CCGG 1 cut(s) 122
Bsp1286I GDGCHC 3 cut(s) 60, 77, 145
Bsp143I GATC 2 cut(s) 108, 185
BspCNI CTCAG 1 cut(s) 253
BspMAI CTGCAG 1 cut(s) 410
BspPI GGATC 1 cut(s) 193
BsrDI GCAATG 1 cut(s) 129
BsrI ACTGG 1 cut(s) 249
BssMI GATC 2 cut(s) 108, 185
BssSI CACGAG 1 cut(s) 380
Bst2BI CACGAG 1 cut(s) 380
Bst2UI CCWGG 1 cut(s) 115
Bst4CI ACNGT 2 cut(s) 169, 338
Bst6I CTCTTC 1 cut(s) 59
BstAPI GCANNNNNTGC 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 360
BstKTI GATC 2 cut(s) 111, 188
BstMBI GATC 2 cut(s) 108, 185
BstMCI CGRYCG 1 cut(s) 297
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNI CCWGG 1 cut(s) 115
BstSCI CCNGG 1 cut(s) 113
BstSFI CTRYAG 1 cut(s) 406
BstSLI GKGCMC 1 cut(s) 145
BstX2I RGATCY 1 cut(s) 185
BstYI RGATCY 1 cut(s) 185
Bsu36I CCTNAGG 1 cut(s) 240
BtsCI GGATG 1 cut(s) 360
BtsIMutI CAGTG 3 cut(s) 45, 165, 256
Cfr13I GGNCC 1 cut(s) 209
CviJI RGCY 3 cut(s) 46, 104, 177
CviKI_1 RGCY 3 cut(s) 46, 104, 177
DdeI CTNAG 1 cut(s) 240
DpnI GATC 2 cut(s) 110, 187
DpnII GATC 2 cut(s) 108, 185
DraIII CACNNNGTG 1 cut(s) 149
Eam1104I CTCTTC 1 cut(s) 59
EarI CTCTTC 1 cut(s) 59
Eco47I GGWCC 1 cut(s) 209
Eco81I CCTNAGG 1 cut(s) 240
EcoRI GAATTC 1 cut(s) 401
EcoRII CCWGG 1 cut(s) 113
FaiI YATR 5 cut(s) 11, 33, 236, 334, 389
Fnu4HI GCNGC 1 cut(s) 409
FokI GGATG 1 cut(s) 347
Fsp4HI GCNGC 1 cut(s) 409
GluI GCNGC 1 cut(s) 409
HapII CCGG 1 cut(s) 122
HinfI GANTC 5 cut(s) 35, 89, 118, 153, 393
HpaII CCGG 1 cut(s) 122
HphI GGTGA 1 cut(s) 103
Hpy166II GTNNAC 2 cut(s) 127, 143
Hpy188III TCNNGA 3 cut(s) 316, 352, 380
Hpy8I GTNNAC 2 cut(s) 127, 143
HpyCH4III ACNGT 2 cut(s) 169, 338
HpyCH4V TGCA 5 cut(s) 51, 134, 143, 254, 408
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 1 cut(s) 240
Kzo9I GATC 2 cut(s) 108, 185
LpnPI CCDG 7 cut(s) 63, 100, 127, 135, 174, 227, 262
LweI GCATC 2 cut(s) 357, 369
MalI GATC 2 cut(s) 110, 187
MboI GATC 2 cut(s) 108, 185
MboII GAAGA 1 cut(s) 76
MflI RGATCY 1 cut(s) 185
MhlI GDGCHC 3 cut(s) 60, 77, 145
MluCI AATT 1 cut(s) 401
MlyI GAGTC 1 cut(s) 112
MnlI CCTC 7 cut(s) 94, 155, 188, 222, 227, 249, 312
MslI CAYNNNNRTG 2 cut(s) 266, 365
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 1 cut(s) 115
MvaI CCWGG 1 cut(s) 115
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 2 cut(s) 108, 185
OliI CACNNNNGTG 1 cut(s) 266
PfeI GAWTC 4 cut(s) 35, 89, 153, 393
PkrI GCNGC 1 cut(s) 410
PleI GAGTC 1 cut(s) 112
PpsI GAGTC 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 113
PspGI CCWGG 1 cut(s) 113
PspPI GGNCC 1 cut(s) 209
PstI CTGCAG 1 cut(s) 410
PsuI RGATCY 1 cut(s) 185
RseI CAYNNNNRTG 2 cut(s) 266, 365
SatI GCNGC 1 cut(s) 409
Sau3AI GATC 2 cut(s) 108, 185
Sau96I GGNCC 1 cut(s) 209
SchI GAGTC 1 cut(s) 112
ScrFI CCNGG 1 cut(s) 115
SduI GDGCHC 3 cut(s) 60, 77, 145
SetI ASST 7 cut(s) 48, 116, 199, 214, 241, 246, 323
SfaNI GCATC 2 cut(s) 357, 369
SfcI CTRYAG 1 cut(s) 406
SinI GGWCC 1 cut(s) 209
SmiMI CAYNNNNRTG 2 cut(s) 266, 365
SmlI CTYRAG 2 cut(s) 221, 314
SmoI CTYRAG 2 cut(s) 221, 314
Sse9I AATT 1 cut(s) 401
StyD4I CCNGG 1 cut(s) 113
TaaI ACNGT 2 cut(s) 169, 338
TaqI TCGA 1 cut(s) 107
TaqII GACCGA 1 cut(s) 283
TasI AATT 1 cut(s) 401
TfiI GAWTC 4 cut(s) 35, 89, 153, 393
TscAI CASTG 3 cut(s) 45, 172, 256
TseI GCWGC 1 cut(s) 408
TspDTI ATGAA 2 cut(s) 48, 190
TspRI CASTG 3 cut(s) 45, 172, 256
VneI GTGCAC 1 cut(s) 141
VpaK11BI GGWCC 1 cut(s) 209
XapI RAATTY 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.