pycom09g12750

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0008151
Physical Location & Seq
Reverse (-)
11305775 .. 11306708
934 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g12750.2

Sequence Viewer

Length: 267 bp
ATGCCGCCTAGGCGGTGGAAGGCGCGCCTCAGGGCTTACTCCCAAACCCAAATTTTGGGTAGGGCAGTTAAACTATACAAAGGACACAGTGTGATTGCGTCTCGGGCAGAATCAAACACAAATTGGAAAGTGCACCATCTTGTTTTTTGTAGTGCTTGTGGCATCATACTTACCATAGCTGGTATATTTGGTGGATTGCTTGGTCTTGGTGGAGGCTTCATTTTAGGTCCAGTTATTCTGGAGCTAGGAATCCCACCTCAGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

89

Amino Acids

9.49

Weight (kDa)

10.61

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 55
AccII CGCG 1 cut(s) 25
AciI CCGC 2 cut(s) 5, 13
AcsI RAATTY 1 cut(s) 51
AdeI CACNNNGTG 1 cut(s) 91
AfiI CCNNNNNNNGG 2 cut(s) 55, 259
AluBI AGCT 2 cut(s) 179, 244
AluI AGCT 2 cut(s) 179, 244
Alw21I GWGCWC 1 cut(s) 135
Alw26I GTCTC 1 cut(s) 105
Alw44I GTGCAC 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 102
ApaLI GTGCAC 1 cut(s) 131
ApoI RAATTY 1 cut(s) 51
AscI GGCGCGCC 1 cut(s) 23
AspA2I CCTAGG 1 cut(s) 8
AspLEI GCGC 2 cut(s) 25, 27
AspS9I GGNCC 1 cut(s) 227
AvaI CYCGRG 1 cut(s) 102
AvaII GGWCC 1 cut(s) 227
AvrII CCTAGG 1 cut(s) 8
AxyI CCTNAGG 2 cut(s) 29, 258
BaeGI GKGCMC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 135
BccI CCATC 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 2 cut(s) 9, 245
BglI GCCNNNNNGGC 1 cut(s) 10
BisI GCNGC 1 cut(s) 5
BlnI CCTAGG 1 cut(s) 8
BlsI GCNGC 1 cut(s) 6
Bme18I GGWCC 1 cut(s) 227
BmeT110I CYCGRG 1 cut(s) 102
BmgT120I GGNCC 1 cut(s) 227
BmsI GCATC 1 cut(s) 171
BpmI CTGGAG 1 cut(s) 260
BsaJI CCNNGG 1 cut(s) 8
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 259
Bse1I ACTGG 1 cut(s) 230
Bse21I CCTNAGG 2 cut(s) 29, 258
BseDI CCNNGG 1 cut(s) 8
BseLI CCNNNNNNNGG 2 cut(s) 55, 259
BseMII CTCAG 1 cut(s) 43
BseNI ACTGG 1 cut(s) 230
BsePI GCGCGC 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 135
Bsh1236I CGCG 1 cut(s) 25
BsiHKAI GWGCWC 1 cut(s) 135
BsiHKCI CYCGRG 1 cut(s) 102
BslI CCNNNNNNNGG 2 cut(s) 55, 259
BsmAI GTCTC 1 cut(s) 105
BsmBI CGTCTC 1 cut(s) 105
BsoBI CYCGRG 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 135
BspACI CCGC 2 cut(s) 5, 13
BspCNI CTCAG 1 cut(s) 42
BspFNI CGCG 1 cut(s) 25
BsrI ACTGG 1 cut(s) 230
BssECI CCNNGG 1 cut(s) 8
BssHII GCGCGC 1 cut(s) 23
BssT1I CCWWGG 1 cut(s) 8
Bst4CI ACNGT 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 25
BstDEI CTNAG 2 cut(s) 29, 258
BstFNI CGCG 1 cut(s) 25
BstHHI GCGC 2 cut(s) 25, 27
BstMAI GTCTC 1 cut(s) 105
BstMWI GCNNNNNNNGC 2 cut(s) 10, 104
BstSLI GKGCMC 1 cut(s) 135
BstUI CGCG 1 cut(s) 25
Bsu36I CCTNAGG 2 cut(s) 29, 258
BtsIMutI CAGTG 1 cut(s) 94
Cac8I GCNNGC 1 cut(s) 25
CfoI GCGC 2 cut(s) 25, 27
Cfr13I GGNCC 1 cut(s) 227
CseI GACGC 1 cut(s) 87
CviJI RGCY 4 cut(s) 35, 179, 216, 244
CviKI_1 RGCY 4 cut(s) 35, 179, 216, 244
DdeI CTNAG 2 cut(s) 29, 258
DraIII CACNNNGTG 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 8
Eco47I GGWCC 1 cut(s) 227
Eco81I CCTNAGG 2 cut(s) 29, 258
Eco88I CYCGRG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 8
ErhI CCWWGG 1 cut(s) 8
Esp3I CGTCTC 1 cut(s) 105
FaiI YATR 4 cut(s) 76, 167, 176, 185
Fnu4HI GCNGC 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 2 cut(s) 9, 245
GlaI GCGC 2 cut(s) 24, 26
GluI GCNGC 1 cut(s) 5
GsuI CTGGAG 1 cut(s) 260
HgaI GACGC 1 cut(s) 87
HhaI GCGC 2 cut(s) 25, 27
Hin6I GCGC 2 cut(s) 23, 25
HinP1I GCGC 2 cut(s) 23, 25
HinfI GANTC 2 cut(s) 110, 249
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 266
Hpy188III TCNNGA 1 cut(s) 239
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 1 cut(s) 13
HpyCH4III ACNGT 1 cut(s) 89
HpyCH4V TGCA 1 cut(s) 133
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 104
HpyF3I CTNAG 2 cut(s) 29, 258
HspAI GCGC 2 cut(s) 23, 25
LmnI GCTCC 1 cut(s) 241
LpnPI CCDG 5 cut(s) 16, 165, 224, 243, 245
LweI GCATC 1 cut(s) 171
MaeI CTAG 2 cut(s) 9, 245
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 2 cut(s) 51, 121
MnlI CCTC 3 cut(s) 38, 206, 267
MseI TTAA 1 cut(s) 69
MvnI CGCG 1 cut(s) 25
MwoI GCNNNNNNNGC 2 cut(s) 10, 104
PalAI GGCGCGCC 1 cut(s) 23
PauI GCGCGC 1 cut(s) 23
PfeI GAWTC 2 cut(s) 110, 249
PflMI CCANNNNNTGG 1 cut(s) 55
PkrI GCNGC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 227
PteI GCGCGC 1 cut(s) 23
SaqAI TTAA 1 cut(s) 69
SatI GCNGC 1 cut(s) 5
Sau96I GGNCC 1 cut(s) 227
SduI GDGCHC 1 cut(s) 135
SetI ASST 5 cut(s) 181, 229, 246, 259, 264
SfaNI GCATC 1 cut(s) 171
SgsI GGCGCGCC 1 cut(s) 23
SinI GGWCC 1 cut(s) 227
Sse9I AATT 2 cut(s) 51, 121
SsiI CCGC 2 cut(s) 5, 13
SspMI CTAG 2 cut(s) 9, 245
StyI CCWWGG 1 cut(s) 8
TaaI ACNGT 1 cut(s) 89
TasI AATT 2 cut(s) 51, 121
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 2 cut(s) 110, 249
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TscAI CASTG 1 cut(s) 94
TspDTI ATGAA 1 cut(s) 208
TspRI CASTG 1 cut(s) 94
Van91I CCANNNNNTGG 1 cut(s) 55
VneI GTGCAC 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 227
XapI RAATTY 1 cut(s) 51
XmaJI CCTAGG 1 cut(s) 8
XspI CTAG 2 cut(s) 9, 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.