Rmu_sc0006243.1_g000012

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006243.1
OG0008151
Physical Location & Seq
Reverse (-)
54023 .. 56041
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006243.1_g000012.1.cds

Sequence Viewer

Length: 330 bp
atgcagatccctgtggcttttggagccagttcatacgaggctgttagactgcactatggacaaagagtgatttcatcccaggaagtatcaagcacgaattggaaagtgcaccatcttattctttattgtggctgcggcatcatagctggtatagttggtggtttgcttggacttggtggaggcttcattctgggtcctctttttctggagctgggagtcccacctcaggtgtcgagtgccacagctacatttgccatgacattttctgcgtccttgtcagttgttgaatactacctcctcaaacgttttccagttccctatggtaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

109

Amino Acids

11.59

Weight (kDa)

7.82

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 135
AclI AACGTT 1 cut(s) 304
AfiI CCNNNNNNNGG 1 cut(s) 226
AgsI TTSAA 1 cut(s) 287
AjnI CCWGG 1 cut(s) 78
AluBI AGCT 3 cut(s) 146, 211, 245
AluI AGCT 3 cut(s) 146, 211, 245
Alw21I GWGCWC 1 cut(s) 111
Alw44I GTGCAC 1 cut(s) 107
ApaLI GTGCAC 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 132
AspS9I GGNCC 1 cut(s) 194
AvaII GGWCC 1 cut(s) 194
AxyI CCTNAGG 1 cut(s) 225
BaeGI GKGCMC 1 cut(s) 111
Bbv12I GWGCWC 1 cut(s) 111
BbvI GCAGC 1 cut(s) 119
BccI CCATC 1 cut(s) 120
BciT130I CCWGG 1 cut(s) 80
BisI GCNGC 2 cut(s) 133, 136
BlsI GCNGC 2 cut(s) 134, 137
Bme1390I CCNGG 1 cut(s) 80
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 2 cut(s) 25, 195
BmrFI CCNGG 1 cut(s) 80
BmsI GCATC 1 cut(s) 147
BpmI CTGGAG 1 cut(s) 227
BsaJI CCNNGG 1 cut(s) 78
Bsc4I CCNNNNNNNGG 1 cut(s) 226
Bse1I ACTGG 2 cut(s) 27, 311
Bse21I CCTNAGG 1 cut(s) 225
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 1 cut(s) 78
BseGI GGATG 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 226
BseMII CTCAG 1 cut(s) 239
BseNI ACTGG 2 cut(s) 27, 311
BseRI GAGGAG 1 cut(s) 287
BseSI GKGCMC 1 cut(s) 111
BseXI GCAGC 1 cut(s) 119
BseYI CCCAGC 1 cut(s) 211
BsgI GTGCAG 1 cut(s) 35
BsiHKAI GWGCWC 1 cut(s) 111
BslFI GGGAC 1 cut(s) 203
BslI CCNNNNNNNGG 1 cut(s) 226
BsmFI GGGAC 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 111
Bsp143I GATC 1 cut(s) 6
BspACI CCGC 1 cut(s) 135
BspCNI CTCAG 1 cut(s) 238
BspLI GGNNCC 2 cut(s) 25, 195
BsrI ACTGG 2 cut(s) 27, 311
BssECI CCNNGG 1 cut(s) 78
BssMI GATC 1 cut(s) 6
Bst2UI CCWGG 1 cut(s) 80
BstDEI CTNAG 1 cut(s) 225
BstF5I GGATG 1 cut(s) 74
BstKTI GATC 1 cut(s) 9
BstMBI GATC 1 cut(s) 6
BstMWI GCNNNNNNNGC 2 cut(s) 23, 251
BstNI CCWGG 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 78
BstSLI GKGCMC 1 cut(s) 111
BstV1I GCAGC 1 cut(s) 119
BstX2I RGATCY 1 cut(s) 6
BstYI RGATCY 1 cut(s) 6
Bsu36I CCTNAGG 1 cut(s) 225
BtsCI GGATG 1 cut(s) 74
Cfr13I GGNCC 1 cut(s) 194
CseI GACGC 1 cut(s) 258
CviAII CATG 1 cut(s) 256
CviJI RGCY 8 cut(s) 17, 26, 41, 132, 146, 183, 211, 245
CviKI_1 RGCY 8 cut(s) 17, 26, 41, 132, 146, 183, 211, 245
DdeI CTNAG 1 cut(s) 225
DpnI GATC 1 cut(s) 8
DpnII GATC 1 cut(s) 6
Eco47I GGWCC 1 cut(s) 194
Eco81I CCTNAGG 1 cut(s) 225
EcoO109I RGGNCCY 1 cut(s) 194
EcoRII CCWGG 1 cut(s) 78
FaeI CATG 1 cut(s) 259
FaiI YATR 6 cut(s) 34, 57, 143, 152, 257, 321
FaqI GGGAC 1 cut(s) 203
FatI CATG 1 cut(s) 255
Fnu4HI GCNGC 2 cut(s) 133, 136
FokI GGATG 1 cut(s) 61
Fsp4HI GCNGC 2 cut(s) 133, 136
GluI GCNGC 2 cut(s) 133, 136
GsaI CCCAGC 1 cut(s) 215
GsuI CTGGAG 1 cut(s) 227
HgaI GACGC 1 cut(s) 258
Hin1II CATG 1 cut(s) 259
HinfI GANTC 1 cut(s) 216
Hpy166II GTNNAC 1 cut(s) 109
Hpy188III TCNNGA 1 cut(s) 206
Hpy8I GTNNAC 1 cut(s) 109
HpyCH4IV ACGT 1 cut(s) 304
HpyCH4V TGCA 3 cut(s) 4, 52, 109
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 251
HpyF3I CTNAG 1 cut(s) 225
HpySE526I ACGT 1 cut(s) 304
Hsp92II CATG 1 cut(s) 259
Kzo9I GATC 1 cut(s) 6
LmnI GCTCC 2 cut(s) 23, 208
Lsp1109I GCAGC 1 cut(s) 119
LweI GCATC 1 cut(s) 147
MaeII ACGT 1 cut(s) 304
MalI GATC 1 cut(s) 8
MboI GATC 1 cut(s) 6
MflI RGATCY 1 cut(s) 6
MhlI GDGCHC 1 cut(s) 111
MluCI AATT 2 cut(s) 97, 325
MlyI GAGTC 1 cut(s) 225
MnlI CCTC 6 cut(s) 31, 173, 207, 234, 305, 308
MseI TTAA 1 cut(s) 328
MspR9I CCNGG 1 cut(s) 80
MvaI CCWGG 1 cut(s) 80
MwoI GCNNNNNNNGC 2 cut(s) 23, 251
NdeII GATC 1 cut(s) 6
NlaIII CATG 1 cut(s) 259
NlaIV GGNNCC 2 cut(s) 25, 195
PkrI GCNGC 2 cut(s) 134, 137
PleI GAGTC 1 cut(s) 224
PpsI GAGTC 1 cut(s) 224
PpuMI RGGWCCY 1 cut(s) 194
Psp1406I AACGTT 1 cut(s) 304
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 1 cut(s) 78
PspFI CCCAGC 1 cut(s) 211
PspGI CCWGG 1 cut(s) 78
PspN4I GGNNCC 2 cut(s) 25, 195
PspPI GGNCC 1 cut(s) 194
PspPPI RGGWCCY 1 cut(s) 194
PsuI RGATCY 1 cut(s) 6
SaqAI TTAA 1 cut(s) 328
SatI GCNGC 2 cut(s) 133, 136
Sau3AI GATC 1 cut(s) 6
Sau96I GGNCC 1 cut(s) 194
SchI GAGTC 1 cut(s) 225
ScrFI CCNGG 1 cut(s) 80
SduI GDGCHC 1 cut(s) 111
SetI ASST 7 cut(s) 148, 213, 226, 231, 247, 297, 307
SfaNI GCATC 1 cut(s) 147
SinI GGWCC 1 cut(s) 194
Sse9I AATT 2 cut(s) 97, 325
SsiI CCGC 1 cut(s) 135
StyD4I CCNGG 1 cut(s) 78
TaiI ACGT 1 cut(s) 307
TaqI TCGA 1 cut(s) 233
TasI AATT 2 cut(s) 97, 325
TauI GCSGC 1 cut(s) 138
Tru1I TTAA 1 cut(s) 328
Tru9I TTAA 1 cut(s) 328
TseI GCWGC 1 cut(s) 132
TspDTI ATGAA 3 cut(s) 21, 63, 175
VneI GTGCAC 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.