leaf senescence
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66330 AT1G66330 |
| fragaria_vesca | FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 |
| malus_domestica | MD09G1263800.v1.1 MD17G1258600.v1.1 MD17G1259100.v1.1 |
| prunus_persica | Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 |
| pyrus_communis | pycom09g17770 |
| rosa_chinensis | RchiOBHm_Chr3g0493131 RchiOBHm_Chr7g0216651 |
| rosa_laevigata | RLG00000022727 |
| rosa_multiflora | Rmu_sc0008053.1_g000028 Rmu_sc0008162.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00071580 Rroxscaffold_6G00391790 Rroxscaffold_7G00204460 |
| rosa_rugosa | Rorug03G0259300 |
| rosa_samantha | Rh3AG308200 Rh3BG344400 Rh3CG341500 Rh3DG343700 Rh5BG260800 |
| rosa_wichuraiana | Rw0G002850 Rw0G018320 Rw2G023320 Rw3G027110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 1248 |
| AclWI | GGATC | 1 cut(s) | 1016 |
| AcsI | RAATTY | 3 cut(s) | 75, 82, 428 |
| AcuI | CTGAAG | 2 cut(s) | 438, 1047 |
| AcyI | GRCGYC | 1 cut(s) | 983 |
| AfaI | GTAC | 1 cut(s) | 827 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 131, 928 |
| AflII | CTTAAG | 2 cut(s) | 557, 1274 |
| AjiI | CACGTC | 1 cut(s) | 164 |
| AjnI | CCWGG | 1 cut(s) | 925 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 197, 229, 1320, 1352 |
| Alw21I | GWGCWC | 2 cut(s) | 163, 627 |
| Alw26I | GTCTC | 4 cut(s) | 170, 244, 326, 1207 |
| Alw44I | GTGCAC | 1 cut(s) | 159 |
| AlwI | GGATC | 1 cut(s) | 1016 |
| Ama87I | CYCGRG | 1 cut(s) | 570 |
| ApaLI | GTGCAC | 1 cut(s) | 159 |
| ApeKI | GCWGC | 6 cut(s) | 148, 683, 1160, 1163, 1244, 1250 |
| ApoI | RAATTY | 3 cut(s) | 75, 82, 428 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 434, 466 |
| AspLEI | GCGC | 1 cut(s) | 729 |
| AsuC2I | CCSGG | 3 cut(s) | 571, 572, 1135 |
| AsuHPI | GGTGA | 3 cut(s) | 329, 826, 1355 |
| AvaI | CYCGRG | 1 cut(s) | 570 |
| BaeGI | GKGCMC | 1 cut(s) | 163 |
| BanII | GRGCYC | 3 cut(s) | 373, 469, 627 |
| BauI | CACGAG | 1 cut(s) | 492 |
| Bbv12I | GWGCWC | 2 cut(s) | 163, 627 |
| BbvI | GCAGC | 6 cut(s) | 160, 670, 1147, 1175, 1231, 1262 |
| BccI | CCATC | 7 cut(s) | 191, 356, 805, 998, 1070, 1177, 1192 |
| BceAI | ACGGC | 1 cut(s) | 714 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1352, 1386 |
| BciT130I | CCWGG | 1 cut(s) | 927 |
| BciVI | GTATCC | 1 cut(s) | 577 |
| BcnI | CCSGG | 3 cut(s) | 571, 572, 1135 |
| BcoDI | GTCTC | 4 cut(s) | 170, 244, 326, 1207 |
| BfaI | CTAG | 1 cut(s) | 669 |
| BfmI | CTRYAG | 2 cut(s) | 36, 1161 |
| BfrI | CTTAAG | 2 cut(s) | 557, 1274 |
| BfuI | GTATCC | 1 cut(s) | 577 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 716, 776 |
| BglII | AGATCT | 1 cut(s) | 248 |
| BisI | GCNGC | 7 cut(s) | 149, 684, 1161, 1164, 1245, 1248, 1251 |
| BlpI | GCTNAGC | 1 cut(s) | 621 |
| BlsI | GCNGC | 7 cut(s) | 150, 685, 1162, 1165, 1246, 1249, 1252 |
| Bme1390I | CCNGG | 4 cut(s) | 571, 572, 927, 1135 |
| BmeT110I | CYCGRG | 1 cut(s) | 570 |
| BmgBI | CACGTC | 1 cut(s) | 164 |
| BmiI | GGNNCC | 2 cut(s) | 372, 709 |
| BmrFI | CCNGG | 4 cut(s) | 571, 572, 927, 1135 |
| BmrI | ACTGGG | 1 cut(s) | 887 |
| BmsI | GCATC | 5 cut(s) | 312, 502, 556, 757, 1057 |
| BmuI | ACTGGG | 1 cut(s) | 887 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 379, 411 |
| BpmI | CTGGAG | 6 cut(s) | 291, 357, 385, 803, 994, 1330 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 621 |
| BpuEI | CTTGAG | 1 cut(s) | 1055 |
| BpuMI | CCSGG | 3 cut(s) | 571, 572, 1135 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1230 |
| BsaHI | GRCGYC | 1 cut(s) | 983 |
| BsaJI | CCNNGG | 2 cut(s) | 570, 926 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 131, 928 |
| Bse1I | ACTGG | 5 cut(s) | 224, 374, 402, 882, 977 |
| Bse3DI | GCAATG | 3 cut(s) | 478, 765, 1077 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1230 |
| BseBI | CCWGG | 1 cut(s) | 927 |
| BseDI | CCNNGG | 2 cut(s) | 570, 926 |
| BseGI | GGATG | 6 cut(s) | 358, 517, 571, 816, 1081, 1203 |
| BseJI | GATNNNNATC | 1 cut(s) | 1230 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 131, 928 |
| BseMI | GCAATG | 3 cut(s) | 478, 765, 1077 |
| BseMII | CTCAG | 5 cut(s) | 181, 257, 375, 579, 612 |
| BseNI | ACTGG | 5 cut(s) | 224, 374, 402, 882, 977 |
| BseSI | GKGCMC | 1 cut(s) | 163 |
| BseXI | GCAGC | 6 cut(s) | 160, 670, 1147, 1175, 1231, 1262 |
| Bsh1285I | CGRYCG | 1 cut(s) | 946 |
| BsiEI | CGRYCG | 1 cut(s) | 946 |
| BsiHKAI | GWGCWC | 2 cut(s) | 163, 627 |
| BsiHKCI | CYCGRG | 1 cut(s) | 570 |
| BsiSI | CCGG | 3 cut(s) | 571, 1135, 1235 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 131, 928 |
| BsmAI | GTCTC | 4 cut(s) | 170, 244, 326, 1207 |
| BsmBI | CGTCTC | 1 cut(s) | 170 |
| BsoBI | CYCGRG | 1 cut(s) | 570 |
| Bsp1286I | GDGCHC | 4 cut(s) | 163, 373, 469, 627 |
| Bsp1407I | TGTACA | 1 cut(s) | 825 |
| Bsp143I | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 621 |
| BspACI | CCGC | 1 cut(s) | 1248 |
| BspCNI | CTCAG | 5 cut(s) | 180, 256, 376, 580, 613 |
| BspHI | TCATGA | 1 cut(s) | 802 |
| BspLI | GGNNCC | 2 cut(s) | 372, 709 |
| BspMAI | CTGCAG | 2 cut(s) | 40, 1165 |
| BspPI | GGATC | 1 cut(s) | 1016 |
| BspQI | GCTCTTC | 1 cut(s) | 1023 |
| BspTI | CTTAAG | 2 cut(s) | 557, 1274 |
| BsrDI | GCAATG | 3 cut(s) | 478, 765, 1077 |
| BsrGI | TGTACA | 1 cut(s) | 825 |
| BsrI | ACTGG | 5 cut(s) | 224, 374, 402, 882, 977 |
| BssECI | CCNNGG | 2 cut(s) | 570, 926 |
| BssMI | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| BssNI | GRCGYC | 1 cut(s) | 983 |
| BssSI | CACGAG | 1 cut(s) | 492 |
| Bst2BI | CACGAG | 1 cut(s) | 492 |
| Bst2UI | CCWGG | 1 cut(s) | 927 |
| Bst4CI | ACNGT | 3 cut(s) | 238, 256, 602 |
| Bst6I | CTCTTC | 1 cut(s) | 1023 |
| BstACI | GRCGYC | 1 cut(s) | 983 |
| BstAFI | CTTAAG | 2 cut(s) | 557, 1274 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 11, 1244 |
| BstAUI | TGTACA | 1 cut(s) | 825 |
| BstC8I | GCNNGC | 3 cut(s) | 16, 424, 469 |
| BstDEI | CTNAG | 6 cut(s) | 167, 243, 384, 588, 621, 712 |
| BstF5I | GGATG | 6 cut(s) | 358, 517, 571, 816, 1081, 1203 |
| BstHHI | GCGC | 1 cut(s) | 729 |
| BstKTI | GATC | 6 cut(s) | 251, 648, 946, 1024, 1063, 1293 |
| BstMAI | GTCTC | 4 cut(s) | 170, 244, 326, 1207 |
| BstMBI | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| BstMCI | CGRYCG | 1 cut(s) | 946 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 716, 776, 889, 1160, 1244, 1250, 1259 |
| BstNI | CCWGG | 1 cut(s) | 927 |
| BstSCI | CCNGG | 4 cut(s) | 569, 570, 925, 1133 |
| BstSFI | CTRYAG | 2 cut(s) | 36, 1161 |
| BstSLI | GKGCMC | 1 cut(s) | 163 |
| BstV1I | GCAGC | 6 cut(s) | 160, 670, 1147, 1175, 1231, 1262 |
| BstX2I | RGATCY | 1 cut(s) | 248 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1156, 1176 |
| BstYI | RGATCY | 1 cut(s) | 248 |
| BsuI | GTATCC | 1 cut(s) | 577 |
| BtrI | CACGTC | 1 cut(s) | 164 |
| BtsCI | GGATG | 6 cut(s) | 358, 517, 571, 816, 1081, 1203 |
| BtsI | GCAGTG | 1 cut(s) | 45 |
| BtsIMutI | CAGTG | 2 cut(s) | 45, 105 |
| Cac8I | GCNNGC | 3 cut(s) | 16, 424, 469 |
| CciI | TCATGA | 1 cut(s) | 802 |
| CfoI | GCGC | 1 cut(s) | 729 |
| Cfr9I | CCCGGG | 1 cut(s) | 570 |
| CseI | GACGC | 3 cut(s) | 452, 512, 972 |
| Csp6I | GTAC | 1 cut(s) | 826 |
| CviAII | CATG | 1 cut(s) | 803 |
| CviQI | GTAC | 1 cut(s) | 826 |
| DdeI | CTNAG | 6 cut(s) | 167, 243, 384, 588, 621, 712 |
| DpnI | GATC | 6 cut(s) | 250, 647, 945, 1023, 1062, 1292 |
| DpnII | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| DraI | TTTAAA | 1 cut(s) | 81 |
| Eam1104I | CTCTTC | 1 cut(s) | 1023 |
| EarI | CTCTTC | 1 cut(s) | 1023 |
| Ecl136II | GAGCTC | 1 cut(s) | 625 |
| Eco24I | GRGCYC | 3 cut(s) | 373, 469, 627 |
| Eco53kI | GAGCTC | 1 cut(s) | 625 |
| Eco57I | CTGAAG | 2 cut(s) | 438, 1047 |
| Eco88I | CYCGRG | 1 cut(s) | 570 |
| EcoICRI | GAGCTC | 1 cut(s) | 625 |
| EcoRII | CCWGG | 1 cut(s) | 925 |
| EcoT38I | GRGCYC | 3 cut(s) | 373, 469, 627 |
| Esp3I | CGTCTC | 1 cut(s) | 170 |
| FaeI | CATG | 1 cut(s) | 806 |
| FatI | CATG | 1 cut(s) | 802 |
| Fnu4HI | GCNGC | 7 cut(s) | 149, 684, 1161, 1164, 1245, 1248, 1251 |
| FokI | GGATG | 6 cut(s) | 365, 524, 578, 823, 1088, 1210 |
| FriOI | GRGCYC | 3 cut(s) | 373, 469, 627 |
| Fsp4HI | GCNGC | 7 cut(s) | 149, 684, 1161, 1164, 1245, 1248, 1251 |
| FspBI | CTAG | 1 cut(s) | 669 |
| GlaI | GCGC | 1 cut(s) | 728 |
| GluI | GCNGC | 7 cut(s) | 149, 684, 1161, 1164, 1245, 1248, 1251 |
| GsuI | CTGGAG | 6 cut(s) | 291, 357, 385, 803, 994, 1330 |
| HapII | CCGG | 3 cut(s) | 571, 1135, 1235 |
| HgaI | GACGC | 3 cut(s) | 452, 512, 972 |
| HhaI | GCGC | 1 cut(s) | 729 |
| Hin1I | GRCGYC | 1 cut(s) | 983 |
| Hin1II | CATG | 1 cut(s) | 806 |
| Hin6I | GCGC | 1 cut(s) | 727 |
| HinP1I | GCGC | 1 cut(s) | 727 |
| HindIII | AAGCTT | 2 cut(s) | 420, 966 |
| HinfI | GANTC | 7 cut(s) | 58, 277, 320, 665, 1180, 1215, 1358 |
| HpaII | CCGG | 3 cut(s) | 571, 1135, 1235 |
| HphI | GGTGA | 3 cut(s) | 329, 826, 1355 |
| Hpy166II | GTNNAC | 6 cut(s) | 161, 221, 341, 817, 1179, 1317 |
| Hpy188I | TCNGA | 7 cut(s) | 175, 246, 385, 418, 865, 943, 1363 |
| Hpy8I | GTNNAC | 6 cut(s) | 161, 221, 341, 817, 1179, 1317 |
| HpyAV | CCTTC | 3 cut(s) | 125, 638, 1292 |
| HpyCH4III | ACNGT | 3 cut(s) | 238, 256, 602 |
| HpyCH4IV | ACGT | 3 cut(s) | 163, 531, 754 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 716, 776, 889, 1160, 1244, 1250, 1259 |
| HpyF3I | CTNAG | 6 cut(s) | 167, 243, 384, 588, 621, 712 |
| HpySE526I | ACGT | 3 cut(s) | 163, 531, 754 |
| Hsp92I | GRCGYC | 1 cut(s) | 983 |
| Hsp92II | CATG | 1 cut(s) | 806 |
| HspAI | GCGC | 1 cut(s) | 727 |
| Kzo9I | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| LguI | GCTCTTC | 1 cut(s) | 1023 |
| LmnI | GCTCC | 5 cut(s) | 376, 630, 707, 1171, 1202 |
| Lsp1109I | GCAGC | 6 cut(s) | 160, 670, 1147, 1175, 1231, 1262 |
| LweI | GCATC | 5 cut(s) | 312, 502, 556, 757, 1057 |
| MaeI | CTAG | 1 cut(s) | 669 |
| MaeII | ACGT | 3 cut(s) | 163, 531, 754 |
| MaeIII | GTNAC | 2 cut(s) | 40, 701 |
| MalI | GATC | 6 cut(s) | 250, 647, 945, 1023, 1062, 1292 |
| MboI | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| MboII | GAAGA | 6 cut(s) | 371, 622, 625, 930, 1040, 1235 |
| MfeI | CAATTG | 1 cut(s) | 1239 |
| MflI | RGATCY | 1 cut(s) | 248 |
| MhlI | GDGCHC | 4 cut(s) | 163, 373, 469, 627 |
| MlyI | GAGTC | 4 cut(s) | 286, 674, 1174, 1209 |
| MmeI | TCCRAC | 2 cut(s) | 489, 1386 |
| MseI | TTAA | 5 cut(s) | 80, 558, 650, 1043, 1275 |
| MslI | CAYNNNNRTG | 2 cut(s) | 699, 1174 |
| MspCI | CTTAAG | 2 cut(s) | 557, 1274 |
| MspI | CCGG | 3 cut(s) | 571, 1135, 1235 |
| MspR9I | CCNGG | 4 cut(s) | 571, 572, 927, 1135 |
| MunI | CAATTG | 1 cut(s) | 1239 |
| MvaI | CCWGG | 1 cut(s) | 927 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 716, 776, 889, 1160, 1244, 1250, 1259 |
| NciI | CCSGG | 3 cut(s) | 571, 572, 1135 |
| NdeII | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| NlaIII | CATG | 1 cut(s) | 806 |
| NlaIV | GGNNCC | 2 cut(s) | 372, 709 |
| NmeAIII | GCCGAG | 1 cut(s) | 688 |
| NmuCI | GTSAC | 2 cut(s) | 40, 701 |
| PagI | TCATGA | 1 cut(s) | 802 |
| PciSI | GCTCTTC | 1 cut(s) | 1023 |
| PfeI | GAWTC | 3 cut(s) | 58, 320, 1358 |
| PkrI | GCNGC | 7 cut(s) | 150, 685, 1162, 1165, 1246, 1249, 1252 |
| Ple19I | CGATCG | 1 cut(s) | 946 |
| PleI | GAGTC | 4 cut(s) | 285, 673, 1174, 1209 |
| PpsI | GAGTC | 4 cut(s) | 285, 673, 1174, 1209 |
| Psp124BI | GAGCTC | 1 cut(s) | 627 |
| Psp6I | CCWGG | 1 cut(s) | 925 |
| PspGI | CCWGG | 1 cut(s) | 925 |
| PspN4I | GGNNCC | 2 cut(s) | 372, 709 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 809, 841 |
| PstI | CTGCAG | 2 cut(s) | 40, 1165 |
| PsuI | RGATCY | 1 cut(s) | 248 |
| PvuI | CGATCG | 1 cut(s) | 946 |
| RsaI | GTAC | 1 cut(s) | 827 |
| RsaNI | GTAC | 1 cut(s) | 826 |
| RseI | CAYNNNNRTG | 2 cut(s) | 699, 1174 |
| SacI | GAGCTC | 1 cut(s) | 627 |
| SapI | GCTCTTC | 1 cut(s) | 1023 |
| SaqAI | TTAA | 5 cut(s) | 80, 558, 650, 1043, 1275 |
| SatI | GCNGC | 7 cut(s) | 149, 684, 1161, 1164, 1245, 1248, 1251 |
| Sau3AI | GATC | 6 cut(s) | 248, 645, 943, 1021, 1060, 1290 |
| SchI | GAGTC | 4 cut(s) | 286, 674, 1174, 1209 |
| ScrFI | CCNGG | 4 cut(s) | 571, 572, 927, 1135 |
| SduI | GDGCHC | 4 cut(s) | 163, 373, 469, 627 |
| SfaNI | GCATC | 5 cut(s) | 312, 502, 556, 757, 1057 |
| SfcI | CTRYAG | 2 cut(s) | 36, 1161 |
| SmaI | CCCGGG | 1 cut(s) | 572 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 699, 1174 |
| SmlI | CTYRAG | 3 cut(s) | 557, 1034, 1274 |
| SmoI | CTYRAG | 3 cut(s) | 557, 1034, 1274 |
| SrfI | GCCCGGGC | 1 cut(s) | 572 |
| SsiI | CCGC | 1 cut(s) | 1248 |
| SspI | AATATT | 1 cut(s) | 799 |
| SspMI | CTAG | 1 cut(s) | 669 |
| SstI | GAGCTC | 1 cut(s) | 627 |
| StyD4I | CCNGG | 4 cut(s) | 569, 570, 925, 1133 |
| TaaI | ACNGT | 3 cut(s) | 238, 256, 602 |
| TaiI | ACGT | 3 cut(s) | 166, 534, 757 |
| TaqI | TCGA | 2 cut(s) | 1065, 1293 |
| TatI | WGTACW | 1 cut(s) | 825 |
| TauI | GCSGC | 1 cut(s) | 1250 |
| TfiI | GAWTC | 3 cut(s) | 58, 320, 1358 |
| Tru1I | TTAA | 5 cut(s) | 80, 558, 650, 1043, 1275 |
| Tru9I | TTAA | 5 cut(s) | 80, 558, 650, 1043, 1275 |
| TscAI | CASTG | 2 cut(s) | 45, 105 |
| TseFI | GTSAC | 2 cut(s) | 40, 701 |
| TseI | GCWGC | 6 cut(s) | 148, 683, 1160, 1163, 1244, 1250 |
| Tsp45I | GTSAC | 2 cut(s) | 40, 701 |
| TspDTI | ATGAA | 7 cut(s) | 107, 372, 474, 620, 776, 791, 1337 |
| TspGWI | ACGGA | 2 cut(s) | 720, 731 |
| TspMI | CCCGGG | 1 cut(s) | 570 |
| TspRI | CASTG | 2 cut(s) | 45, 105 |
| Vha464I | CTTAAG | 2 cut(s) | 557, 1274 |
| VneI | GTGCAC | 1 cut(s) | 159 |
| XapI | RAATTY | 3 cut(s) | 75, 82, 428 |
| XbaI | TCTAGA | 1 cut(s) | 668 |
| XmaI | CCCGGG | 1 cut(s) | 570 |
| XspI | CTAG | 1 cut(s) | 669 |