leaf senescence
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66330 AT1G66330 |
| fragaria_vesca | FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 FvH4_1g28740 |
| malus_domestica | MD09G1263800.v1.1 MD17G1258600.v1.1 MD17G1259100.v1.1 |
| prunus_persica | Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 Prupe.3G161300_v2.0.a1 |
| pyrus_communis | pycom09g17770 |
| rosa_chinensis | RchiOBHm_Chr3g0493131 RchiOBHm_Chr7g0216651 |
| rosa_laevigata | RLG00000022727 |
| rosa_multiflora | Rmu_sc0008053.1_g000028 Rmu_sc0008162.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00071580 Rroxscaffold_6G00391790 Rroxscaffold_7G00204460 |
| rosa_rugosa | Rorug03G0259300 |
| rosa_samantha | Rh3AG308200 Rh3BG344400 Rh3CG341500 Rh3DG343700 Rh5BG260800 |
| rosa_wichuraiana | Rw0G002850 Rw0G018320 Rw2G023320 Rw3G027110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 38 |
| AcuI | CTGAAG | 2 cut(s) | 39, 69 |
| AluBI | AGCT | 3 cut(s) | 23, 55, 188 |
| AluI | AGCT | 3 cut(s) | 23, 55, 188 |
| AlwI | GGATC | 1 cut(s) | 38 |
| ApeKI | GCWGC | 2 cut(s) | 182, 185 |
| BbvI | GCAGC | 2 cut(s) | 169, 197 |
| BccI | CCATC | 3 cut(s) | 20, 92, 199 |
| BciVI | GTATCC | 1 cut(s) | 124 |
| BfaI | CTAG | 2 cut(s) | 135, 156 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BfuI | GTATCC | 1 cut(s) | 124 |
| BglII | AGATCT | 1 cut(s) | 82 |
| BisI | GCNGC | 2 cut(s) | 183, 186 |
| BlsI | GCNGC | 2 cut(s) | 184, 187 |
| BmiI | GGNNCC | 1 cut(s) | 226 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BpuEI | CTTGAG | 1 cut(s) | 77 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 2 cut(s) | 103, 207 |
| BseXI | GCAGC | 2 cut(s) | 169, 197 |
| Bsp143I | GATC | 2 cut(s) | 43, 82 |
| Bsp19I | CCATGG | 1 cut(s) | 93 |
| BspLI | GGNNCC | 1 cut(s) | 226 |
| BspMAI | CTGCAG | 1 cut(s) | 187 |
| BspPI | GGATC | 1 cut(s) | 38 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 2 cut(s) | 43, 82 |
| BssT1I | CCWWGG | 1 cut(s) | 93 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstC8I | GCNNGC | 1 cut(s) | 162 |
| BstDSI | CCRYGG | 1 cut(s) | 93 |
| BstF5I | GGATG | 2 cut(s) | 103, 207 |
| BstKTI | GATC | 2 cut(s) | 46, 85 |
| BstMBI | GATC | 2 cut(s) | 43, 82 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 182 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstV1I | GCAGC | 2 cut(s) | 169, 197 |
| BstX2I | RGATCY | 1 cut(s) | 82 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 178, 198 |
| BstYI | RGATCY | 1 cut(s) | 82 |
| BsuI | GTATCC | 1 cut(s) | 124 |
| BtgI | CCRYGG | 1 cut(s) | 93 |
| BtsCI | GGATG | 2 cut(s) | 103, 207 |
| Cac8I | GCNNGC | 1 cut(s) | 162 |
| CviAII | CATG | 1 cut(s) | 94 |
| CviJI | RGCY | 6 cut(s) | 23, 55, 170, 182, 188, 227 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 55, 170, 182, 188, 227 |
| DpnI | GATC | 2 cut(s) | 45, 84 |
| DpnII | GATC | 2 cut(s) | 43, 82 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 1 cut(s) | 93 |
| Eco32I | GATATC | 1 cut(s) | 148 |
| Eco57I | CTGAAG | 2 cut(s) | 39, 69 |
| EcoRV | GATATC | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 93 |
| ErhI | CCWWGG | 1 cut(s) | 93 |
| FaeI | CATG | 1 cut(s) | 97 |
| FaiI | YATR | 4 cut(s) | 39, 80, 95, 197 |
| FatI | CATG | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 2 cut(s) | 183, 186 |
| FokI | GGATG | 2 cut(s) | 110, 214 |
| Fsp4HI | GCNGC | 2 cut(s) | 183, 186 |
| FspBI | CTAG | 2 cut(s) | 135, 156 |
| GluI | GCNGC | 2 cut(s) | 183, 186 |
| Hin1II | CATG | 1 cut(s) | 97 |
| Hpy188I | TCNGA | 1 cut(s) | 19 |
| Hpy188III | TCNNGA | 2 cut(s) | 47, 86 |
| HpyCH4V | TGCA | 3 cut(s) | 71, 185, 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 182 |
| Hsp92II | CATG | 1 cut(s) | 97 |
| Kzo9I | GATC | 2 cut(s) | 43, 82 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LmnI | GCTCC | 2 cut(s) | 193, 224 |
| LpnPI | CCDG | 3 cut(s) | 60, 156, 201 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 197 |
| LweI | GCATC | 1 cut(s) | 79 |
| MaeI | CTAG | 2 cut(s) | 135, 156 |
| MalI | GATC | 2 cut(s) | 45, 84 |
| MboI | GATC | 2 cut(s) | 43, 82 |
| MboII | GAAGA | 1 cut(s) | 62 |
| MflI | RGATCY | 1 cut(s) | 82 |
| MluCI | AATT | 2 cut(s) | 30, 66 |
| MnlI | CCTC | 1 cut(s) | 23 |
| MseI | TTAA | 1 cut(s) | 65 |
| MslI | CAYNNNNRTG | 1 cut(s) | 196 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 182 |
| NcoI | CCATGG | 1 cut(s) | 93 |
| NdeII | GATC | 2 cut(s) | 43, 82 |
| NlaIII | CATG | 1 cut(s) | 97 |
| NlaIV | GGNNCC | 1 cut(s) | 226 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PkrI | GCNGC | 2 cut(s) | 184, 187 |
| PspN4I | GGNNCC | 1 cut(s) | 226 |
| PstI | CTGCAG | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 82 |
| RseI | CAYNNNNRTG | 1 cut(s) | 196 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 1 cut(s) | 65 |
| SatI | GCNGC | 2 cut(s) | 183, 186 |
| Sau3AI | GATC | 2 cut(s) | 43, 82 |
| SetI | ASST | 3 cut(s) | 25, 57, 190 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 196 |
| SmlI | CTYRAG | 1 cut(s) | 56 |
| SmoI | CTYRAG | 1 cut(s) | 56 |
| Sse9I | AATT | 2 cut(s) | 30, 66 |
| SspMI | CTAG | 2 cut(s) | 135, 156 |
| StyI | CCWWGG | 1 cut(s) | 93 |
| TasI | AATT | 2 cut(s) | 30, 66 |
| Tru1I | TTAA | 1 cut(s) | 65 |
| Tru9I | TTAA | 1 cut(s) | 65 |
| TseI | GCWGC | 2 cut(s) | 182, 185 |
| XspI | CTAG | 2 cut(s) | 135, 156 |