MD10G1008800.v1.1

ACT domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
1281671 .. 1292253
10583 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1008800.v1.1.491

Sequence Viewer

Length: 1350 bp
ATGGCTAGAGTTTGTTCGCCATACTTTGATCCTGAGTATGAGAACCTGAGCACAAGAATCAATCCCCCAAGGGTCTCCGTAGACAACTCTAGCTGCAGTGACTGTACTCTAGTCAAGGTTGACAGTGTCAACAAACCGGGAATTCTGCTTGAAGTTGTGCAAATCTTGACAGACCTTGACCTCATAATCACCAAAGCCTATATCTCCTCCGATGGTGGATGGTTCATGGATGTATTTCACGTCACCGATCAGCAAGGAAAAAAAGTTACAGACAGTAAGACCATTGACTACATAGAGAAGGCTTTAGGACCAAAGGGCCATATCACAGACCTGCTGAATGCTTGGCCAGGAAAAGGGGTTGGAGTGCACTCTATCGGGGATCATACGGCCATTGAGCTAATTGGCAGAGACCGACCAGGTCTCTTATCTGAGATCTCTGCTGTCCTTGCCAACCTTCACTTTAATGTAATTGCTGCCGACGTATGGACACACAATGGACGAATAGCTTGCGTTGTGTATGTCAATGATGATACTACATGCCAACCTGTGGAGGATCAAGCCAGGTTATCTACTATGGAGGAGCAGCTCAAGAACATCCTGCGTGGGTGTGAGGACGATGAGAAAGTTGGTCGCACTAGCTTCTCTATGGGGTTCACCCATGTTGATAGGCGGCTCCACCAGATGTTGTTTGCTGATAGGGATTATGAGGGTGGTGGACTGGCACATGAAGTTGATCACTTTCCTCCCTGCTTCCAACCAAAGATCGCCATTGAGCGTTGTGAAGAAAAGGGGTACTCGGTGGTTAGTGTGCGGTGCAAGGACCGTGCAAAGCTTATGTTTGACATCGTATGCACACTCACAGATATGCAGTATGTTGTTTTCCATGCCACCATCTCATCTGATGGCCCATACGCATCACAGGAGTATTTTATTCGTCACATGGATGGTTGCACCCTCGATACTGAAGGAGAAAAGGAAAGAGCCATCAAATGTATTGATGCTGCAATTCGAAGAAGAGTAAGCGAGGGTCTAAGGCTGGAGCTGTGTGCAAAGGATAGAGTAGGCTTGCTTTCTGAAGTAACAAGGATCCTGAGAGAGAATGGATTGTCAGTTACAAGAGCAGGCGTCACAACAATTGGGGATCAAGGAATTAATATCTTTTATGTTAGAGATTCTTCAGGGAATTCTGTGGACATAAAGACAATCGAAGCACTTCGTAAAGAAATCGGACACACAATGATGTTCAATGTGAAGAAAGTCCCAACAAGTTCTGCTGAGGTGCCTGAGACTAAAGGATGGGCCAAGACAAGCTTCTTCTTTGGGAACTTGCTAGAGAGGTTCTTGGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

450

Amino Acids

50.05

Weight (kDa)

5.6

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACT PF01842 37 - 86 4.7e-08 ACT domain
ACT PF01842 130 - 200 5.3e-09 ACT domain
ACT PF01842 267 - 326 2e-06 ACT domain
ACT PF01842 346 - 408 3.9e-10 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 339
AccB1I GGYRCC 1 cut(s) 1279
AccB7I CCANNNNNTGG 1 cut(s) 547
AccI GTMKAC 1 cut(s) 81
AciI CCGC 2 cut(s) 670, 811
AclWI GGATC 6 cut(s) 23, 387, 561, 1081, 1094, 1149
AcoI YGGCCR 2 cut(s) 344, 387
AcsI RAATTY 2 cut(s) 141, 1183
AcuI CTGAAG 3 cut(s) 984, 1095, 1161
AcyI GRCGYC 1 cut(s) 1125
AfaI GTAC 2 cut(s) 106, 794
AfiI CCNNNNNNNGG 3 cut(s) 353, 483, 547
AgsI TTSAA 2 cut(s) 152, 1246
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 3 cut(s) 346, 415, 560
AjuI GAANNNNNNNTTGG 2 cut(s) 1295, 1327
AluBI AGCT 8 cut(s) 93, 397, 506, 586, 639, 832, 1042, 1311
AluI AGCT 8 cut(s) 93, 397, 506, 586, 639, 832, 1042, 1311
Alw21I GWGCWC 2 cut(s) 53, 369
Alw26I GTCTC 4 cut(s) 79, 402, 425, 1280
Alw44I GTGCAC 1 cut(s) 365
AlwI GGATC 6 cut(s) 23, 387, 561, 1081, 1094, 1149
AlwNI CAGNNNCTG 1 cut(s) 102
AoxI GGCC 5 cut(s) 316, 344, 387, 904, 1299
ApaLI GTGCAC 1 cut(s) 365
ApeKI GCWGC 4 cut(s) 93, 473, 583, 1001
ApoI RAATTY 2 cut(s) 141, 1183
AseI ATTAAT 1 cut(s) 1152
Asp700I GAANNNNTTC 1 cut(s) 1212
AspS9I GGNCC 5 cut(s) 308, 316, 820, 905, 1299
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 3 cut(s) 181, 235, 646
AsuII TTCGAA 1 cut(s) 1009
AvaII GGWCC 2 cut(s) 308, 820
BaeGI GKGCMC 1 cut(s) 369
BalI TGGCCA 1 cut(s) 346
BamHI GGATCC 1 cut(s) 1086
BanI GGYRCC 1 cut(s) 1279
Bbv12I GWGCWC 2 cut(s) 53, 369
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 4 cut(s) 80, 460, 595, 988
BccI CCATC 7 cut(s) 206, 213, 896, 899, 938, 992, 1290
BceAI ACGGC 1 cut(s) 402
BcgI CGANNNNNNTGC 2 cut(s) 489, 523
BciT130I CCWGG 3 cut(s) 348, 417, 562
BclI TGATCA 1 cut(s) 733
BcnI CCSGG 1 cut(s) 138
BcoDI GTCTC 4 cut(s) 79, 402, 425, 1280
BfaI CTAG 5 cut(s) 6, 90, 110, 636, 1331
BfmI CTRYAG 1 cut(s) 94
BfuAI ACCTGC 1 cut(s) 339
BglII AGATCT 1 cut(s) 432
BisI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
BlsI GCNGC 5 cut(s) 95, 475, 585, 672, 1003
Bme1390I CCNGG 4 cut(s) 138, 348, 417, 562
Bme18I GGWCC 2 cut(s) 308, 820
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 5 cut(s) 308, 316, 820, 905, 1299
BmiI GGNNCC 3 cut(s) 674, 1088, 1281
BmrFI CCNGG 4 cut(s) 138, 348, 417, 562
BmsI GCATC 2 cut(s) 923, 988
BpmI CTGGAG 1 cut(s) 1058
Bpu10I CCTNAGC 2 cut(s) 47, 1275
Bpu14I TTCGAA 1 cut(s) 1009
BpuEI CTTGAG 1 cut(s) 572
BpuMI CCSGG 1 cut(s) 138
BsaHI GRCGYC 1 cut(s) 1125
BsaI GGTCTC 3 cut(s) 79, 402, 425
BsaJI CCNNGG 1 cut(s) 68
Bsc4I CCNNNNNNNGG 3 cut(s) 353, 483, 547
Bse1I ACTGG 1 cut(s) 723
BseBI CCWGG 3 cut(s) 348, 417, 562
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 5 cut(s) 224, 235, 594, 949, 1301
BseLI CCNNNNNNNGG 3 cut(s) 353, 483, 547
BseMII CTCAG 6 cut(s) 24, 38, 420, 1082, 1266, 1275
BseNI ACTGG 1 cut(s) 723
BseRI GAGGAG 2 cut(s) 196, 593
BseSI GKGCMC 1 cut(s) 369
BseXI GCAGC 4 cut(s) 80, 460, 595, 988
BshFI GGCC 5 cut(s) 318, 346, 389, 906, 1301
BshNI GGYRCC 1 cut(s) 1279
BsiHKAI GWGCWC 2 cut(s) 53, 369
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 1244
BslI CCNNNNNNNGG 3 cut(s) 353, 483, 547
BsmAI GTCTC 4 cut(s) 79, 402, 425, 1280
BsmFI GGGAC 1 cut(s) 1244
BsmI GAATGC 1 cut(s) 343
BsnI GGCC 5 cut(s) 318, 346, 389, 906, 1301
Bso31I GGTCTC 3 cut(s) 79, 402, 425
Bsp119I TTCGAA 1 cut(s) 1009
Bsp1286I GDGCHC 2 cut(s) 53, 369
Bsp143I GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
BspACI CCGC 2 cut(s) 670, 811
BspANI GGCC 5 cut(s) 318, 346, 389, 906, 1301
BspCNI CTCAG 6 cut(s) 25, 39, 421, 1083, 1267, 1276
BspLI GGNNCC 3 cut(s) 674, 1088, 1281
BspMAI CTGCAG 1 cut(s) 98
BspMI ACCTGC 1 cut(s) 339
BspPI GGATC 6 cut(s) 23, 387, 561, 1081, 1094, 1149
BspT104I TTCGAA 1 cut(s) 1009
BspT107I GGYRCC 1 cut(s) 1279
BspTNI GGTCTC 3 cut(s) 79, 402, 425
BsrI ACTGG 1 cut(s) 723
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
BssNI GRCGYC 1 cut(s) 1125
BssT1I CCWWGG 1 cut(s) 68
Bst2UI CCWGG 3 cut(s) 348, 417, 562
Bst4CI ACNGT 4 cut(s) 104, 125, 275, 824
Bst6I CTCTTC 1 cut(s) 1009
BstACI GRCGYC 1 cut(s) 1125
BstBI TTCGAA 1 cut(s) 1009
BstC8I GCNNGC 3 cut(s) 508, 1067, 1123
BstDEI CTNAG 7 cut(s) 33, 47, 429, 1031, 1091, 1275, 1284
BstF5I GGATG 5 cut(s) 224, 235, 594, 949, 1301
BstKTI GATC 9 cut(s) 31, 250, 382, 435, 556, 736, 765, 1089, 1144
BstMAI GTCTC 4 cut(s) 79, 402, 425, 1280
BstMBI GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
BstMWI GCNNNNNNNGC 1 cut(s) 446
BstNI CCWGG 3 cut(s) 348, 417, 562
BstNSI RCATGY 1 cut(s) 540
BstSCI CCNGG 4 cut(s) 136, 346, 415, 560
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 1 cut(s) 369
BstV1I GCAGC 4 cut(s) 80, 460, 595, 988
BstX2I RGATCY 2 cut(s) 432, 1086
BstYI RGATCY 2 cut(s) 432, 1086
BsuRI GGCC 5 cut(s) 318, 346, 389, 906, 1301
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 5 cut(s) 224, 235, 594, 949, 1301
BtsI GCAGTG 1 cut(s) 103
BtsIMutI CAGTG 2 cut(s) 103, 130
BveI ACCTGC 1 cut(s) 339
Cac8I GCNNGC 3 cut(s) 508, 1067, 1123
CaiI CAGNNNCTG 1 cut(s) 102
Cfr13I GGNCC 5 cut(s) 308, 316, 820, 905, 1299
CseI GACGC 1 cut(s) 1114
CsiI ACCWGGT 1 cut(s) 415
Csp6I GTAC 2 cut(s) 105, 793
CviAII CATG 6 cut(s) 226, 537, 659, 725, 884, 940
CviQI GTAC 2 cut(s) 105, 793
DdeI CTNAG 7 cut(s) 33, 47, 429, 1031, 1091, 1275, 1284
DpnI GATC 9 cut(s) 30, 249, 381, 434, 555, 735, 764, 1088, 1143
DpnII GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
EaeI YGGCCR 2 cut(s) 344, 387
Eam1104I CTCTTC 1 cut(s) 1009
EarI CTCTTC 1 cut(s) 1009
Eco130I CCWWGG 1 cut(s) 68
Eco31I GGTCTC 3 cut(s) 79, 402, 425
Eco47I GGWCC 2 cut(s) 308, 820
Eco57I CTGAAG 3 cut(s) 984, 1095, 1161
EcoRI GAATTC 2 cut(s) 141, 1183
EcoRII CCWGG 3 cut(s) 346, 415, 560
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 6 cut(s) 229, 540, 662, 728, 887, 943
FalI AAGNNNNNCTT 2 cut(s) 1295, 1327
FaqI GGGAC 1 cut(s) 1244
FatI CATG 6 cut(s) 225, 536, 658, 724, 883, 939
FbaI TGATCA 1 cut(s) 733
FblI GTMKAC 1 cut(s) 81
Fnu4HI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
FokI GGATG 5 cut(s) 231, 242, 581, 956, 1308
Fsp4HI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
FspBI CTAG 5 cut(s) 6, 90, 110, 636, 1331
GluI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
GsuI CTGGAG 1 cut(s) 1058
HaeIII GGCC 5 cut(s) 318, 346, 389, 906, 1301
HapII CCGG 1 cut(s) 137
HgaI GACGC 1 cut(s) 1114
Hin1I GRCGYC 1 cut(s) 1125
Hin1II CATG 6 cut(s) 229, 540, 662, 728, 887, 943
HincII GTYRAC 2 cut(s) 121, 130
HindII GTYRAC 2 cut(s) 121, 130
HindIII AAGCTT 2 cut(s) 830, 1309
HinfI GANTC 2 cut(s) 57, 1172
HpaII CCGG 1 cut(s) 137
HphI GGTGA 3 cut(s) 181, 235, 646
Hpy166II GTNNAC 7 cut(s) 82, 121, 130, 367, 654, 716, 1192
Hpy188I TCNGA 5 cut(s) 211, 430, 901, 1075, 1229
Hpy188III TCNNGA 4 cut(s) 32, 166, 589, 1090
Hpy8I GTNNAC 7 cut(s) 82, 121, 130, 367, 654, 716, 1192
Hpy99I CGWCG 1 cut(s) 482
HpyAV CCTTC 3 cut(s) 292, 464, 959
HpyCH4III ACNGT 4 cut(s) 104, 125, 275, 824
HpyCH4IV ACGT 2 cut(s) 240, 480
HpyF10VI GCNNNNNNNGC 1 cut(s) 446
HpyF3I CTNAG 7 cut(s) 33, 47, 429, 1031, 1091, 1275, 1284
HpySE526I ACGT 2 cut(s) 240, 480
Hsp92I GRCGYC 1 cut(s) 1125
Hsp92II CATG 6 cut(s) 229, 540, 662, 728, 887, 943
Ksp22I TGATCA 1 cut(s) 733
Kzo9I GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
LmnI GCTCC 3 cut(s) 580, 678, 1039
Lsp1109I GCAGC 4 cut(s) 80, 460, 595, 988
LweI GCATC 2 cut(s) 923, 988
MabI ACCWGGT 1 cut(s) 415
MaeI CTAG 5 cut(s) 6, 90, 110, 636, 1331
MaeII ACGT 2 cut(s) 240, 480
MaeIII GTNAC 7 cut(s) 98, 241, 265, 935, 1078, 1111, 1126
MalI GATC 9 cut(s) 30, 249, 381, 434, 555, 735, 764, 1088, 1143
MboI GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
MboII GAAGA 6 cut(s) 794, 1023, 1026, 1167, 1264, 1306
MfeI CAATTG 1 cut(s) 1134
MflI RGATCY 2 cut(s) 432, 1086
MhlI GDGCHC 2 cut(s) 53, 369
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 7 cut(s) 141, 399, 468, 1005, 1134, 1149, 1183
MluNI TGGCCA 1 cut(s) 346
MmeI TCCRAC 2 cut(s) 340, 778
Mox20I TGGCCA 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 1212
MscI TGGCCA 1 cut(s) 346
MseI TTAA 2 cut(s) 462, 1152
MslI CAYNNNNRTG 4 cut(s) 462, 863, 942, 1238
Msp20I TGGCCA 1 cut(s) 346
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 4 cut(s) 138, 348, 417, 562
MunI CAATTG 1 cut(s) 1134
Mva1269I GAATGC 1 cut(s) 343
MvaI CCWGG 3 cut(s) 348, 417, 562
MwoI GCNNNNNNNGC 1 cut(s) 446
NciI CCSGG 1 cut(s) 138
NdeII GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
NlaIII CATG 6 cut(s) 229, 540, 662, 728, 887, 943
NlaIV GGNNCC 3 cut(s) 674, 1088, 1281
NmuCI GTSAC 4 cut(s) 98, 241, 935, 1126
NspI RCATGY 1 cut(s) 540
NspV TTCGAA 1 cut(s) 1009
PctI GAATGC 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 2 cut(s) 57, 1172
PflFI GACNNNGTC 2 cut(s) 125, 417
PflMI CCANNNNNTGG 1 cut(s) 547
PkrI GCNGC 5 cut(s) 95, 475, 585, 672, 1003
PshBI ATTAAT 1 cut(s) 1152
Psp6I CCWGG 3 cut(s) 346, 415, 560
PspGI CCWGG 3 cut(s) 346, 415, 560
PspN4I GGNNCC 3 cut(s) 674, 1088, 1281
PspPI GGNCC 5 cut(s) 308, 316, 820, 905, 1299
PstI CTGCAG 1 cut(s) 98
PstNI CAGNNNCTG 1 cut(s) 102
PsuI RGATCY 2 cut(s) 432, 1086
PsyI GACNNNGTC 2 cut(s) 125, 417
RsaI GTAC 2 cut(s) 106, 794
RsaNI GTAC 2 cut(s) 105, 793
RseI CAYNNNNRTG 4 cut(s) 462, 863, 942, 1238
SaqAI TTAA 2 cut(s) 462, 1152
SatI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
Sau3AI GATC 9 cut(s) 28, 247, 379, 432, 553, 733, 762, 1086, 1141
Sau96I GGNCC 5 cut(s) 308, 316, 820, 905, 1299
ScrFI CCNGG 4 cut(s) 138, 348, 417, 562
SduI GDGCHC 2 cut(s) 53, 369
SexAI ACCWGGT 1 cut(s) 415
SfaNI GCATC 2 cut(s) 923, 988
SfcI CTRYAG 1 cut(s) 94
SfuI TTCGAA 1 cut(s) 1009
SinI GGWCC 2 cut(s) 308, 820
SmiMI CAYNNNNRTG 4 cut(s) 462, 863, 942, 1238
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
Sse9I AATT 7 cut(s) 141, 399, 468, 1005, 1134, 1149, 1183
SsiI CCGC 2 cut(s) 670, 811
SspMI CTAG 5 cut(s) 6, 90, 110, 636, 1331
StyD4I CCNGG 4 cut(s) 136, 346, 415, 560
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 4 cut(s) 104, 125, 275, 824
TaiI ACGT 2 cut(s) 243, 483
TaqI TCGA 3 cut(s) 957, 1009, 1206
TaqII GACCGA 1 cut(s) 426
TasI AATT 7 cut(s) 141, 399, 468, 1005, 1134, 1149, 1183
TatI WGTACW 1 cut(s) 104
TauI GCSGC 1 cut(s) 673
TfiI GAWTC 2 cut(s) 57, 1172
Tru1I TTAA 2 cut(s) 462, 1152
Tru9I TTAA 2 cut(s) 462, 1152
TscAI CASTG 2 cut(s) 103, 130
TseFI GTSAC 4 cut(s) 98, 241, 935, 1126
TseI GCWGC 4 cut(s) 93, 473, 583, 1001
Tsp45I GTSAC 4 cut(s) 98, 241, 935, 1126
TspDTI ATGAA 2 cut(s) 214, 741
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 2 cut(s) 103, 130
Tth111I GACNNNGTC 2 cut(s) 125, 417
Van91I CCANNNNNTGG 1 cut(s) 547
VneI GTGCAC 1 cut(s) 365
VpaK11BI GGWCC 2 cut(s) 308, 820
VspI ATTAAT 1 cut(s) 1152
XapI RAATTY 2 cut(s) 141, 1183
XceI RCATGY 1 cut(s) 540
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 1212
XspI CTAG 5 cut(s) 6, 90, 110, 636, 1331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.