pycom10g00530

ACT domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
577982 .. 581182
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g00530.6

Sequence Viewer

Length: 1380 bp
ATGGCTAGAGTTTGTTCGCCATACTTTGATCCTGAGTATGAGAACCTGAGCACAAGAATCAATCCCCCGAGGGTCTCCATAGACAACTCTAGCTGCAGTGACTGTACTATAGTCAAGGTTGACAGTGTCAACAAACCGGGAATTCTGCTTGAAGTCGTGCAAATCTTGACAGACCTTGACCTCATAATCACCAAAGCCTATATCTCCTCCGATGGTGGATGGTTCATGGATGTATTTCACGTCACCGATCAGCAAGGAAAAAAAGTTACAGACAGTAAAACCATCGACTACATAGAGAAGGCTTTAGGACCAAAGGGCCATATCACAGACCTGCTGAATGCTTGGCCAGGAAAAGGGGTTGGAGTGCACTCGGTCGGGGATCATACGGCCATTGAGATAATTGGCAGAGACCGACCAGGTCTCTTATCTGAGATCTCTGCTGTCCTTGCCAACCTTCACATTAATGTAATTGCTGCCGAAGTATGGACACACAATGGACGAATAGCTTGTGTTGTGTATGTCAATGATGATACTACATGCCAACCTGTGGAGAATAACACAACAAAACGATCGATCAAGCCAGGTTATCCACTATGGAGGAGCAGCTCAAGAACATCCTGCGTGGTTGTGAGGACGATGAGAAAGTTGGTCGCACTAGCTTCTCTATGGGGTTCACCCATGTTGATAGGCGGCTCCACCAGATGTTGTTTGCTGATAGAGATTATGAGGGTGGTGGACTGGCAAATGAAGTTGATCATTTTCCTCCCTGCTTCCAACCAAAGATCACCATTGAGCGTTGTGAAGAAAAGGGGTACTCGGTGGTTAGTGTGCGGTGCAAGGACCGTGCTAAGCTCATGTTTGACATCGTATGCACACTCACAGATATGCAGTATGTTGTTTTCCATGCCACCATCTCATCTGATGGCCCATACGCATCACAGTTACCTGCAGGAGTATTTTATCCGTCACATGGATGGTTGCACCCTCGATACTGAAGGAGAAAAGGAAAGGGCCATAAAATGTATTGATGCTGCAATTCGCAGAAGAGTAAGCGAGGGTCTAAGGCTAGAGCTGTGTGCAAAGGATAGAGTAGGCTTGCTTTCTGAAGTAACAAGGATCCTGAGAGAGAATGGATTGTCAGTTACAAGAGCAGGCGTCACAACAATTGGGGAGCAAGGAATTAATATCTTTTATGTTAGAGATTCTTCAGGGAATTCTGTGGACGTAAAGACAATCGAAGCACTTCGTAAAGAAATCGGACACACAATGATGTTCAATGTGAAGAGAGTCCCAACAAGTTCTGCTGAGGTGCCTGAGACTAAAGGATGGGCCAAGACAAGCTTCTTTTTTGGGAACTTGCTGGAGAGGTTCTTGGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

50.97

Weight (kDa)

8.77

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 339, 954
AccB1I GGYRCC 1 cut(s) 1309
AccB7I CCANNNNNTGG 1 cut(s) 547
AciI CCGC 2 cut(s) 690, 831
AclWI GGATC 4 cut(s) 23, 387, 1111, 1124
AcoI YGGCCR 2 cut(s) 344, 387
AcsI RAATTY 2 cut(s) 141, 1213
AcuI CTGAAG 3 cut(s) 1014, 1125, 1191
AcyI GRCGYC 1 cut(s) 1155
AfaI GTAC 2 cut(s) 106, 814
AfiI CCNNNNNNNGG 4 cut(s) 353, 483, 547, 970
AgsI TTSAA 2 cut(s) 152, 1276
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 3 cut(s) 346, 415, 580
AjuI GAANNNNNNNTTGG 2 cut(s) 1325, 1357
AluBI AGCT 7 cut(s) 93, 506, 606, 659, 852, 1072, 1341
AluI AGCT 7 cut(s) 93, 506, 606, 659, 852, 1072, 1341
Alw21I GWGCWC 2 cut(s) 53, 369
Alw26I GTCTC 4 cut(s) 79, 402, 425, 1310
Alw44I GTGCAC 1 cut(s) 365
AlwI GGATC 4 cut(s) 23, 387, 1111, 1124
AlwNI CAGNNNCTG 1 cut(s) 102
Ama87I CYCGRG 1 cut(s) 67
AoxI GGCC 6 cut(s) 316, 344, 387, 924, 1011, 1329
ApaLI GTGCAC 1 cut(s) 365
ApeKI GCWGC 4 cut(s) 93, 473, 603, 1031
ApoI RAATTY 2 cut(s) 141, 1213
AseI ATTAAT 2 cut(s) 462, 1182
Asp700I GAANNNNTTC 1 cut(s) 1242
AspS9I GGNCC 6 cut(s) 308, 316, 840, 925, 1011, 1329
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 4 cut(s) 181, 235, 666, 777
AvaI CYCGRG 1 cut(s) 67
AvaII GGWCC 2 cut(s) 308, 840
BaeGI GKGCMC 1 cut(s) 369
BalI TGGCCA 1 cut(s) 346
BamHI GGATCC 1 cut(s) 1116
BanI GGYRCC 1 cut(s) 1309
Bbv12I GWGCWC 2 cut(s) 53, 369
BbvCI CCTCAGC 1 cut(s) 1305
BbvI GCAGC 4 cut(s) 80, 460, 615, 1018
BccI CCATC 7 cut(s) 206, 213, 290, 916, 919, 968, 1320
BceAI ACGGC 1 cut(s) 402
BciT130I CCWGG 3 cut(s) 348, 417, 582
BclI TGATCA 1 cut(s) 753
BcnI CCSGG 1 cut(s) 138
BcoDI GTCTC 4 cut(s) 79, 402, 425, 1310
BfaI CTAG 4 cut(s) 6, 90, 656, 1067
BfmI CTRYAG 3 cut(s) 94, 108, 947
BfuAI ACCTGC 2 cut(s) 339, 954
BglII AGATCT 1 cut(s) 432
BisI GCNGC 5 cut(s) 94, 474, 604, 691, 1032
BlpI GCTNAGC 1 cut(s) 848
BlsI GCNGC 5 cut(s) 95, 475, 605, 692, 1033
Bme1390I CCNGG 4 cut(s) 138, 348, 417, 582
Bme18I GGWCC 2 cut(s) 308, 840
BmeT110I CYCGRG 1 cut(s) 67
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 6 cut(s) 308, 316, 840, 925, 1011, 1329
BmiI GGNNCC 3 cut(s) 694, 1118, 1311
BmrFI CCNGG 4 cut(s) 138, 348, 417, 582
BmsI GCATC 2 cut(s) 943, 1018
Bpu10I CCTNAGC 2 cut(s) 47, 1305
Bpu1102I GCTNAGC 1 cut(s) 848
BpuEI CTTGAG 1 cut(s) 592
BpuMI CCSGG 1 cut(s) 138
Bsa29I ATCGAT 1 cut(s) 572
BsaHI GRCGYC 1 cut(s) 1155
BsaI GGTCTC 3 cut(s) 79, 402, 425
BsaJI CCNNGG 1 cut(s) 68
Bsc4I CCNNNNNNNGG 4 cut(s) 353, 483, 547, 970
Bse1I ACTGG 1 cut(s) 743
BseBI CCWGG 3 cut(s) 348, 417, 582
BseCI ATCGAT 1 cut(s) 572
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 5 cut(s) 224, 235, 614, 979, 1331
BseLI CCNNNNNNNGG 4 cut(s) 353, 483, 547, 970
BseMII CTCAG 6 cut(s) 24, 38, 420, 1112, 1296, 1305
BseNI ACTGG 1 cut(s) 743
BseRI GAGGAG 2 cut(s) 196, 613
BseSI GKGCMC 1 cut(s) 369
BseXI GCAGC 4 cut(s) 80, 460, 615, 1018
Bsh1285I CGRYCG 2 cut(s) 375, 572
BshFI GGCC 6 cut(s) 318, 346, 389, 926, 1013, 1331
BshNI GGYRCC 1 cut(s) 1309
BshVI ATCGAT 1 cut(s) 572
BsiEI CGRYCG 2 cut(s) 375, 572
BsiHKAI GWGCWC 2 cut(s) 53, 369
BsiHKCI CYCGRG 1 cut(s) 67
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 1274
BslI CCNNNNNNNGG 4 cut(s) 353, 483, 547, 970
BsmAI GTCTC 4 cut(s) 79, 402, 425, 1310
BsmFI GGGAC 1 cut(s) 1274
BsmI GAATGC 1 cut(s) 343
BsnI GGCC 6 cut(s) 318, 346, 389, 926, 1013, 1331
Bso31I GGTCTC 3 cut(s) 79, 402, 425
BsoBI CYCGRG 1 cut(s) 67
Bsp1286I GDGCHC 2 cut(s) 53, 369
Bsp143I GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
Bsp1720I GCTNAGC 1 cut(s) 848
BspACI CCGC 2 cut(s) 690, 831
BspANI GGCC 6 cut(s) 318, 346, 389, 926, 1013, 1331
BspCNI CTCAG 6 cut(s) 25, 39, 421, 1113, 1297, 1306
BspDI ATCGAT 1 cut(s) 572
BspLI GGNNCC 3 cut(s) 694, 1118, 1311
BspMAI CTGCAG 2 cut(s) 98, 951
BspMI ACCTGC 2 cut(s) 339, 954
BspPI GGATC 4 cut(s) 23, 387, 1111, 1124
BspT107I GGYRCC 1 cut(s) 1309
BspTNI GGTCTC 3 cut(s) 79, 402, 425
BsrI ACTGG 1 cut(s) 743
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
BssNI GRCGYC 1 cut(s) 1155
Bst2UI CCWGG 3 cut(s) 348, 417, 582
Bst4CI ACNGT 5 cut(s) 104, 125, 275, 844, 941
Bst6I CTCTTC 2 cut(s) 1039, 1277
BstACI GRCGYC 1 cut(s) 1155
BstC8I GCNNGC 2 cut(s) 1097, 1153
BstDEI CTNAG 8 cut(s) 33, 47, 429, 848, 1061, 1121, 1305, 1314
BstF5I GGATG 5 cut(s) 224, 235, 614, 979, 1331
BstKTI GATC 9 cut(s) 31, 250, 382, 435, 572, 576, 756, 785, 1119
BstMAI GTCTC 4 cut(s) 79, 402, 425, 1310
BstMBI GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
BstMCI CGRYCG 2 cut(s) 375, 572
BstMWI GCNNNNNNNGC 1 cut(s) 446
BstNI CCWGG 3 cut(s) 348, 417, 582
BstNSI RCATGY 1 cut(s) 540
BstSCI CCNGG 4 cut(s) 136, 346, 415, 580
BstSFI CTRYAG 3 cut(s) 94, 108, 947
BstSLI GKGCMC 1 cut(s) 369
BstV1I GCAGC 4 cut(s) 80, 460, 615, 1018
BstX2I RGATCY 2 cut(s) 432, 1116
BstYI RGATCY 2 cut(s) 432, 1116
Bsu15I ATCGAT 1 cut(s) 572
BsuRI GGCC 6 cut(s) 318, 346, 389, 926, 1013, 1331
BsuTUI ATCGAT 1 cut(s) 572
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 5 cut(s) 224, 235, 614, 979, 1331
BtsI GCAGTG 1 cut(s) 103
BtsIMutI CAGTG 2 cut(s) 103, 130
BveI ACCTGC 2 cut(s) 339, 954
Cac8I GCNNGC 2 cut(s) 1097, 1153
CaiI CAGNNNCTG 1 cut(s) 102
Cfr13I GGNCC 6 cut(s) 308, 316, 840, 925, 1011, 1329
ClaI ATCGAT 1 cut(s) 572
CseI GACGC 1 cut(s) 1144
CsiI ACCWGGT 1 cut(s) 415
Csp6I GTAC 2 cut(s) 105, 813
CviAII CATG 6 cut(s) 226, 537, 679, 855, 904, 970
CviQI GTAC 2 cut(s) 105, 813
DdeI CTNAG 8 cut(s) 33, 47, 429, 848, 1061, 1121, 1305, 1314
DpnI GATC 9 cut(s) 30, 249, 381, 434, 571, 575, 755, 784, 1118
DpnII GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
EaeI YGGCCR 2 cut(s) 344, 387
Eam1104I CTCTTC 2 cut(s) 1039, 1277
EarI CTCTTC 2 cut(s) 1039, 1277
Eco31I GGTCTC 3 cut(s) 79, 402, 425
Eco47I GGWCC 2 cut(s) 308, 840
Eco57I CTGAAG 3 cut(s) 1014, 1125, 1191
Eco88I CYCGRG 1 cut(s) 67
EcoRI GAATTC 2 cut(s) 141, 1213
EcoRII CCWGG 3 cut(s) 346, 415, 580
FaeI CATG 6 cut(s) 229, 540, 682, 858, 907, 973
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 1 cut(s) 1274
FatI CATG 6 cut(s) 225, 536, 678, 854, 903, 969
FbaI TGATCA 1 cut(s) 753
Fnu4HI GCNGC 5 cut(s) 94, 474, 604, 691, 1032
FokI GGATG 5 cut(s) 231, 242, 601, 986, 1338
Fsp4HI GCNGC 5 cut(s) 94, 474, 604, 691, 1032
FspBI CTAG 4 cut(s) 6, 90, 656, 1067
GluI GCNGC 5 cut(s) 94, 474, 604, 691, 1032
HaeIII GGCC 6 cut(s) 318, 346, 389, 926, 1013, 1331
HapII CCGG 1 cut(s) 137
HgaI GACGC 1 cut(s) 1144
Hin1I GRCGYC 1 cut(s) 1155
Hin1II CATG 6 cut(s) 229, 540, 682, 858, 907, 973
HincII GTYRAC 2 cut(s) 121, 130
HindII GTYRAC 2 cut(s) 121, 130
HindIII AAGCTT 1 cut(s) 1339
HinfI GANTC 3 cut(s) 57, 1202, 1287
HpaII CCGG 1 cut(s) 137
HphI GGTGA 4 cut(s) 181, 235, 666, 777
Hpy166II GTNNAC 6 cut(s) 121, 130, 367, 674, 736, 1222
Hpy188I TCNGA 5 cut(s) 211, 430, 921, 1105, 1259
Hpy188III TCNNGA 4 cut(s) 32, 166, 609, 1120
Hpy8I GTNNAC 6 cut(s) 121, 130, 367, 674, 736, 1222
HpyAV CCTTC 3 cut(s) 292, 464, 989
HpyCH4III ACNGT 5 cut(s) 104, 125, 275, 844, 941
HpyCH4IV ACGT 2 cut(s) 240, 1224
HpyF10VI GCNNNNNNNGC 1 cut(s) 446
HpyF3I CTNAG 8 cut(s) 33, 47, 429, 848, 1061, 1121, 1305, 1314
HpySE526I ACGT 2 cut(s) 240, 1224
Hsp92I GRCGYC 1 cut(s) 1155
Hsp92II CATG 6 cut(s) 229, 540, 682, 858, 907, 973
Ksp22I TGATCA 1 cut(s) 753
Kzo9I GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
LmnI GCTCC 3 cut(s) 600, 698, 1171
Lsp1109I GCAGC 4 cut(s) 80, 460, 615, 1018
LweI GCATC 2 cut(s) 943, 1018
MabI ACCWGGT 1 cut(s) 415
MaeI CTAG 4 cut(s) 6, 90, 656, 1067
MaeII ACGT 2 cut(s) 240, 1224
MaeIII GTNAC 8 cut(s) 98, 241, 265, 941, 965, 1108, 1141, 1156
MalI GATC 9 cut(s) 30, 249, 381, 434, 571, 575, 755, 784, 1118
MboI GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
MboII GAAGA 4 cut(s) 814, 1056, 1197, 1294
MfeI CAATTG 1 cut(s) 1164
MflI RGATCY 2 cut(s) 432, 1116
MhlI GDGCHC 2 cut(s) 53, 369
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 7 cut(s) 141, 399, 468, 1035, 1164, 1179, 1213
MluNI TGGCCA 1 cut(s) 346
MlyI GAGTC 1 cut(s) 1296
MmeI TCCRAC 2 cut(s) 340, 798
Mox20I TGGCCA 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 1242
MscI TGGCCA 1 cut(s) 346
MseI TTAA 2 cut(s) 462, 1182
MslI CAYNNNNRTG 4 cut(s) 462, 883, 972, 1268
Msp20I TGGCCA 1 cut(s) 346
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 4 cut(s) 138, 348, 417, 582
MunI CAATTG 1 cut(s) 1164
Mva1269I GAATGC 1 cut(s) 343
MvaI CCWGG 3 cut(s) 348, 417, 582
MwoI GCNNNNNNNGC 1 cut(s) 446
NciI CCSGG 1 cut(s) 138
NdeII GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
NlaIII CATG 6 cut(s) 229, 540, 682, 858, 907, 973
NlaIV GGNNCC 3 cut(s) 694, 1118, 1311
NmuCI GTSAC 4 cut(s) 98, 241, 965, 1156
NspI RCATGY 1 cut(s) 540
PctI GAATGC 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 2 cut(s) 57, 1202
PflFI GACNNNGTC 2 cut(s) 125, 417
PflMI CCANNNNNTGG 1 cut(s) 547
PkrI GCNGC 5 cut(s) 95, 475, 605, 692, 1033
Ple19I CGATCG 1 cut(s) 572
PleI GAGTC 1 cut(s) 1295
PpsI GAGTC 1 cut(s) 1295
PshBI ATTAAT 2 cut(s) 462, 1182
Psp6I CCWGG 3 cut(s) 346, 415, 580
PspGI CCWGG 3 cut(s) 346, 415, 580
PspN4I GGNNCC 3 cut(s) 694, 1118, 1311
PspPI GGNCC 6 cut(s) 308, 316, 840, 925, 1011, 1329
PstI CTGCAG 2 cut(s) 98, 951
PstNI CAGNNNCTG 1 cut(s) 102
PsuI RGATCY 2 cut(s) 432, 1116
PsyI GACNNNGTC 2 cut(s) 125, 417
PvuI CGATCG 1 cut(s) 572
RsaI GTAC 2 cut(s) 106, 814
RsaNI GTAC 2 cut(s) 105, 813
RseI CAYNNNNRTG 4 cut(s) 462, 883, 972, 1268
SaqAI TTAA 2 cut(s) 462, 1182
SatI GCNGC 5 cut(s) 94, 474, 604, 691, 1032
Sau3AI GATC 9 cut(s) 28, 247, 379, 432, 569, 573, 753, 782, 1116
Sau96I GGNCC 6 cut(s) 308, 316, 840, 925, 1011, 1329
SbfI CCTGCAGG 1 cut(s) 951
SchI GAGTC 1 cut(s) 1296
ScrFI CCNGG 4 cut(s) 138, 348, 417, 582
SdaI CCTGCAGG 1 cut(s) 951
SduI GDGCHC 2 cut(s) 53, 369
SexAI ACCWGGT 1 cut(s) 415
SfaNI GCATC 2 cut(s) 943, 1018
SfcI CTRYAG 3 cut(s) 94, 108, 947
SinI GGWCC 2 cut(s) 308, 840
SmiMI CAYNNNNRTG 4 cut(s) 462, 883, 972, 1268
SmlI CTYRAG 1 cut(s) 607
SmoI CTYRAG 1 cut(s) 607
Sse8387I CCTGCAGG 1 cut(s) 951
Sse9I AATT 7 cut(s) 141, 399, 468, 1035, 1164, 1179, 1213
SsiI CCGC 2 cut(s) 690, 831
SspMI CTAG 4 cut(s) 6, 90, 656, 1067
StyD4I CCNGG 4 cut(s) 136, 346, 415, 580
TaaI ACNGT 5 cut(s) 104, 125, 275, 844, 941
TaiI ACGT 2 cut(s) 243, 1227
TaqI TCGA 4 cut(s) 285, 572, 987, 1236
TaqII GACCGA 2 cut(s) 361, 426
TasI AATT 7 cut(s) 141, 399, 468, 1035, 1164, 1179, 1213
TatI WGTACW 1 cut(s) 104
TauI GCSGC 1 cut(s) 693
TfiI GAWTC 2 cut(s) 57, 1202
Tru1I TTAA 2 cut(s) 462, 1182
Tru9I TTAA 2 cut(s) 462, 1182
TscAI CASTG 2 cut(s) 103, 130
TseFI GTSAC 4 cut(s) 98, 241, 965, 1156
TseI GCWGC 4 cut(s) 93, 473, 603, 1031
Tsp45I GTSAC 4 cut(s) 98, 241, 965, 1156
TspDTI ATGAA 2 cut(s) 214, 761
TspGWI ACGGA 1 cut(s) 953
TspRI CASTG 2 cut(s) 103, 130
Tth111I GACNNNGTC 2 cut(s) 125, 417
Van91I CCANNNNNTGG 1 cut(s) 547
VneI GTGCAC 1 cut(s) 365
VpaK11BI GGWCC 2 cut(s) 308, 840
VspI ATTAAT 2 cut(s) 462, 1182
XapI RAATTY 2 cut(s) 141, 1213
XceI RCATGY 1 cut(s) 540
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 4 cut(s) 6, 90, 656, 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.