pycom05g00530

ACT domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
698356 .. 702218
3863 bp
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UTR
Exon/CDS
Intron
pycom05g00530.3

Sequence Viewer

Length: 1350 bp
ATGGCTAGAGTTTGTTCGCCATACTTCGATCCTGAATATGAGAACCTGAGCACAAGAATCAATCCCCCAAGGGTCTCCGTAGACAACTCTAGCTGCAGTGACTGTACTCTAGTCAAGGTTGATAGTGTCAACAAACCGGGAATTCTGCTTGAAGTCGTGCAAATCTTGACAGACCTTGACCTCATAATCACCAAGGCCTATATCTCCTCAGATGGTGGATGGTTCATGGATGTATTTCACGTCACGGATCAGCAAGGAAAAAAAGTTACAGACAGCAAAACCATTGACTACATAGAGAAGGCTTTGGGACCAAAGGGCCATATCACAGACGTGCTGAATGCTTGGCCAGGAAAACGGGTTGGAGTGCACTCTGTCGGGGATCATACAGCCATTGAGCTTATTGGCAAAGACCGACCAGGTCTCTTATCTGAGATCTCTGCTGTCCTTGCCAACCTTCACTTTAATGTAATTGCTGCCGAAGTATGGACACACAATAGACGAATAGCTTGCGTTGTGTATGTCAATGATAATACTGCATGCCAACCTGTGGAGGATAAAACCAGATTATCTACTATGGAGGAGCAGCTCAAGAACATCCTACGCGGGTGTGAGGATGATGAGAAAGTTGGTCACACTAGCTTCTCTATGGGATTCACGCATGTTGATAGGCGGCTCCACCAGATGTTGTTTGCTGATAGGGATTATGAGGGTGGTGGACTGGCAAATGAAGTTGATCACTTTCCTCCCTGCTTCCAACCAAAGATCACCATTGAGCGTTGTGAAGAAAAGGGGTACTCGGTGGTTAGTGTGCGGTGCAAAGACCGTGCAAAGCTCATGTTTGACATCGTATGCACACTCACAGATATGCAGTACGTTGTTTTCCATGCCACCATTTCATCTGATGGCCCATACGCATCACAGGAGTATTTTATTCGTCACATGGATGGTTGCACCCTCGATACTGAAGGAGAGAAGGAAAGGGTCATCAAATGTATTGACGCTGCAATTCGGAGAAGAGTAAGCGAGGGTCTAAGGCTAGAGCTGTGTGCAAAGGATAGAGTAGGCTTGCTATCTGAAGTAACAAGAATTCTGAGGGAGAATGGATTGTCAGTTACAAGGGCCGGCGTCACAACAATTGGGGAGCAAGCAATGAATATCTTTTATGTTAGAGATTCTTCAGAGAATCCCGTGGACATAAAAACAATAGAAGCACTTCGTAAAGAAATCGGGCATACAATGATGTTCAATGTGAAGAAAGTCCCAACAAATTCTGCTGAGGCACCTGAGACTAAGGGATGGGCTAAGACAAGCTTCTTCTTTGGGAACTTGTTAGAGAGATTCTTGGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

450

Amino Acids

50.35

Weight (kDa)

5.77

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1279
AccB7I CCANNNNNTGG 1 cut(s) 547
AccI GTMKAC 1 cut(s) 81
AccII CGCG 1 cut(s) 603
AciI CCGC 3 cut(s) 603, 670, 811
AclWI GGATC 3 cut(s) 23, 255, 387
AcoI YGGCCR 1 cut(s) 344
AcsI RAATTY 3 cut(s) 141, 1086, 1267
AcuI CTGAAG 3 cut(s) 984, 1095, 1161
AcyI GRCGYC 1 cut(s) 1125
AfaI GTAC 3 cut(s) 106, 794, 872
AfiI CCNNNNNNNGG 2 cut(s) 483, 547
AgsI TTSAA 2 cut(s) 152, 1246
AjiI CACGTC 2 cut(s) 241, 331
AjnI CCWGG 2 cut(s) 346, 415
AleI CACNNNNGTG 1 cut(s) 329
AluBI AGCT 8 cut(s) 93, 397, 506, 586, 639, 832, 1042, 1311
AluI AGCT 8 cut(s) 93, 397, 506, 586, 639, 832, 1042, 1311
Alw21I GWGCWC 2 cut(s) 53, 369
Alw26I GTCTC 3 cut(s) 79, 425, 1280
Alw44I GTGCAC 1 cut(s) 365
AlwI GGATC 3 cut(s) 23, 255, 387
AlwNI CAGNNNCTG 1 cut(s) 102
AoxI GGCC 5 cut(s) 195, 316, 344, 904, 1119
ApaLI GTGCAC 1 cut(s) 365
ApeKI GCWGC 4 cut(s) 93, 473, 583, 1001
ApoI RAATTY 3 cut(s) 141, 1086, 1267
Asp700I GAANNNNTTC 1 cut(s) 1212
AspS9I GGNCC 4 cut(s) 308, 316, 905, 1119
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 2 cut(s) 181, 757
AvaII GGWCC 1 cut(s) 308
BaeGI GKGCMC 1 cut(s) 369
BalI TGGCCA 1 cut(s) 346
BanI GGYRCC 1 cut(s) 1279
Bbv12I GWGCWC 2 cut(s) 53, 369
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 4 cut(s) 80, 460, 595, 988
BccI CCATC 5 cut(s) 206, 213, 896, 938, 1290
BcgI CGANNNNNNTGC 2 cut(s) 489, 523
BciT130I CCWGG 2 cut(s) 348, 417
BclI TGATCA 1 cut(s) 733
BcnI CCSGG 1 cut(s) 138
BcoDI GTCTC 3 cut(s) 79, 425, 1280
BfaI CTAG 5 cut(s) 6, 90, 110, 636, 1037
BfmI CTRYAG 1 cut(s) 94
BglII AGATCT 1 cut(s) 432
BisI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
BlsI GCNGC 5 cut(s) 95, 475, 585, 672, 1003
Bme1390I CCNGG 3 cut(s) 138, 348, 417
Bme18I GGWCC 1 cut(s) 308
BmgBI CACGTC 2 cut(s) 241, 331
BmgT120I GGNCC 4 cut(s) 308, 316, 905, 1119
BmiI GGNNCC 3 cut(s) 309, 674, 1281
BmrFI CCNGG 3 cut(s) 138, 348, 417
BmsI GCATC 1 cut(s) 923
Bpu10I CCTNAGC 2 cut(s) 47, 1275
BpuEI CTTGAG 1 cut(s) 572
BpuMI CCSGG 1 cut(s) 138
BsaHI GRCGYC 1 cut(s) 1125
BsaI GGTCTC 2 cut(s) 79, 425
BsaJI CCNNGG 3 cut(s) 68, 192, 1188
Bsc4I CCNNNNNNNGG 2 cut(s) 483, 547
Bse118I RCCGGY 1 cut(s) 1121
Bse1I ACTGG 1 cut(s) 723
Bse3DI GCAATG 1 cut(s) 1155
BseBI CCWGG 2 cut(s) 348, 417
BseDI CCNNGG 3 cut(s) 68, 192, 1188
BseGI GGATG 6 cut(s) 224, 235, 594, 619, 949, 1301
BseLI CCNNNNNNNGG 2 cut(s) 483, 547
BseMI GCAATG 1 cut(s) 1155
BseMII CTCAG 6 cut(s) 38, 222, 420, 1082, 1266, 1275
BseNI ACTGG 1 cut(s) 723
BseRI GAGGAG 2 cut(s) 196, 593
BseSI GKGCMC 1 cut(s) 369
BseXI GCAGC 4 cut(s) 80, 460, 595, 988
Bsh1236I CGCG 1 cut(s) 603
BshFI GGCC 5 cut(s) 197, 318, 346, 906, 1121
BshNI GGYRCC 1 cut(s) 1279
BsiHKAI GWGCWC 2 cut(s) 53, 369
BsiSI CCGG 2 cut(s) 137, 1122
BslFI GGGAC 2 cut(s) 321, 1244
BslI CCNNNNNNNGG 2 cut(s) 483, 547
BsmAI GTCTC 3 cut(s) 79, 425, 1280
BsmFI GGGAC 2 cut(s) 321, 1244
BsmI GAATGC 1 cut(s) 343
BsnI GGCC 5 cut(s) 197, 318, 346, 906, 1121
Bso31I GGTCTC 2 cut(s) 79, 425
Bsp1286I GDGCHC 2 cut(s) 53, 369
Bsp143I GATC 6 cut(s) 28, 247, 379, 432, 733, 762
BspACI CCGC 3 cut(s) 603, 670, 811
BspANI GGCC 5 cut(s) 197, 318, 346, 906, 1121
BspCNI CTCAG 6 cut(s) 39, 221, 421, 1083, 1267, 1276
BspFNI CGCG 1 cut(s) 603
BspLI GGNNCC 3 cut(s) 309, 674, 1281
BspMAI CTGCAG 1 cut(s) 98
BspPI GGATC 3 cut(s) 23, 255, 387
BspT107I GGYRCC 1 cut(s) 1279
BspTNI GGTCTC 2 cut(s) 79, 425
BsrDI GCAATG 1 cut(s) 1155
BsrFI RCCGGY 1 cut(s) 1121
BsrI ACTGG 1 cut(s) 723
BssAI RCCGGY 1 cut(s) 1121
BssECI CCNNGG 3 cut(s) 68, 192, 1188
BssMI GATC 6 cut(s) 28, 247, 379, 432, 733, 762
BssNI GRCGYC 1 cut(s) 1125
BssT1I CCWWGG 2 cut(s) 68, 192
Bst2UI CCWGG 2 cut(s) 348, 417
Bst4CI ACNGT 2 cut(s) 104, 824
Bst6I CTCTTC 1 cut(s) 1009
BstACI GRCGYC 1 cut(s) 1125
BstC8I GCNNGC 5 cut(s) 508, 538, 1067, 1123, 1146
BstDEI CTNAG 9 cut(s) 47, 208, 429, 1031, 1091, 1275, 1284, 1290, 1302
BstDSI CCRYGG 1 cut(s) 1188
BstF5I GGATG 6 cut(s) 224, 235, 594, 619, 949, 1301
BstFNI CGCG 1 cut(s) 603
BstKTI GATC 6 cut(s) 31, 250, 382, 435, 736, 765
BstMAI GTCTC 3 cut(s) 79, 425, 1280
BstMBI GATC 6 cut(s) 28, 247, 379, 432, 733, 762
BstMWI GCNNNNNNNGC 1 cut(s) 446
BstNI CCWGG 2 cut(s) 348, 417
BstNSI RCATGY 2 cut(s) 540, 662
BstSCI CCNGG 3 cut(s) 136, 346, 415
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 1 cut(s) 369
BstUI CGCG 1 cut(s) 603
BstV1I GCAGC 4 cut(s) 80, 460, 595, 988
BstX2I RGATCY 1 cut(s) 432
BstYI RGATCY 1 cut(s) 432
BsuRI GGCC 5 cut(s) 197, 318, 346, 906, 1121
BtgI CCRYGG 1 cut(s) 1188
BtrI CACGTC 2 cut(s) 241, 331
BtsCI GGATG 6 cut(s) 224, 235, 594, 619, 949, 1301
BtsI GCAGTG 1 cut(s) 103
BtsIMutI CAGTG 1 cut(s) 103
Cac8I GCNNGC 5 cut(s) 508, 538, 1067, 1123, 1146
CaiI CAGNNNCTG 1 cut(s) 102
Cfr10I RCCGGY 1 cut(s) 1121
Cfr13I GGNCC 4 cut(s) 308, 316, 905, 1119
CseI GACGC 2 cut(s) 1007, 1114
CsiI ACCWGGT 1 cut(s) 415
Csp6I GTAC 3 cut(s) 105, 793, 871
CviAII CATG 6 cut(s) 226, 537, 659, 835, 884, 940
CviQI GTAC 3 cut(s) 105, 793, 871
DdeI CTNAG 9 cut(s) 47, 208, 429, 1031, 1091, 1275, 1284, 1290, 1302
DpnI GATC 6 cut(s) 30, 249, 381, 434, 735, 764
DpnII GATC 6 cut(s) 28, 247, 379, 432, 733, 762
EaeI YGGCCR 1 cut(s) 344
Eam1104I CTCTTC 1 cut(s) 1009
EarI CTCTTC 1 cut(s) 1009
Eco130I CCWWGG 2 cut(s) 68, 192
Eco147I AGGCCT 1 cut(s) 197
Eco31I GGTCTC 2 cut(s) 79, 425
Eco47I GGWCC 1 cut(s) 308
Eco57I CTGAAG 3 cut(s) 984, 1095, 1161
EcoRI GAATTC 2 cut(s) 141, 1086
EcoRII CCWGG 2 cut(s) 346, 415
EcoT14I CCWWGG 2 cut(s) 68, 192
ErhI CCWWGG 2 cut(s) 68, 192
FaeI CATG 6 cut(s) 229, 540, 662, 838, 887, 943
FalI AAGNNNNNCTT 2 cut(s) 1295, 1327
FaqI GGGAC 2 cut(s) 321, 1244
FatI CATG 6 cut(s) 225, 536, 658, 834, 883, 939
FauI CCCGC 1 cut(s) 596
FbaI TGATCA 1 cut(s) 733
FblI GTMKAC 1 cut(s) 81
Fnu4HI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
FokI GGATG 6 cut(s) 231, 242, 581, 626, 956, 1308
Fsp4HI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
FspBI CTAG 5 cut(s) 6, 90, 110, 636, 1037
GluI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
HaeIII GGCC 5 cut(s) 197, 318, 346, 906, 1121
HapII CCGG 2 cut(s) 137, 1122
HgaI GACGC 2 cut(s) 1007, 1114
Hin1I GRCGYC 1 cut(s) 1125
Hin1II CATG 6 cut(s) 229, 540, 662, 838, 887, 943
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 1309
HinfI GANTC 5 cut(s) 57, 651, 1172, 1183, 1338
HpaII CCGG 2 cut(s) 137, 1122
HphI GGTGA 2 cut(s) 181, 757
Hpy166II GTNNAC 5 cut(s) 82, 130, 367, 716, 1192
Hpy188I TCNGA 7 cut(s) 211, 430, 901, 1011, 1075, 1092, 1180
Hpy188III TCNNGA 3 cut(s) 32, 166, 589
Hpy8I GTNNAC 5 cut(s) 82, 130, 367, 716, 1192
HpyAV CCTTC 4 cut(s) 292, 464, 959, 967
HpyCH4III ACNGT 2 cut(s) 104, 824
HpyCH4IV ACGT 3 cut(s) 240, 330, 873
HpyF10VI GCNNNNNNNGC 1 cut(s) 446
HpyF3I CTNAG 9 cut(s) 47, 208, 429, 1031, 1091, 1275, 1284, 1290, 1302
HpySE526I ACGT 3 cut(s) 240, 330, 873
Hsp92I GRCGYC 1 cut(s) 1125
Hsp92II CATG 6 cut(s) 229, 540, 662, 838, 887, 943
KroI GCCGGC 1 cut(s) 1121
KroNI GCCGGC 1 cut(s) 1123
Ksp22I TGATCA 1 cut(s) 733
Kzo9I GATC 6 cut(s) 28, 247, 379, 432, 733, 762
LmnI GCTCC 3 cut(s) 580, 678, 1141
Lsp1109I GCAGC 4 cut(s) 80, 460, 595, 988
LweI GCATC 1 cut(s) 923
MabI ACCWGGT 1 cut(s) 415
MaeI CTAG 5 cut(s) 6, 90, 110, 636, 1037
MaeII ACGT 3 cut(s) 240, 330, 873
MaeIII GTNAC 8 cut(s) 98, 241, 265, 629, 935, 1078, 1111, 1126
MalI GATC 6 cut(s) 30, 249, 381, 434, 735, 764
MboI GATC 6 cut(s) 28, 247, 379, 432, 733, 762
MboII GAAGA 5 cut(s) 794, 1026, 1167, 1264, 1306
MfeI CAATTG 1 cut(s) 1134
MflI RGATCY 1 cut(s) 432
MhlI GDGCHC 2 cut(s) 53, 369
MlsI TGGCCA 1 cut(s) 346
MluCI AATT 6 cut(s) 141, 468, 1005, 1086, 1134, 1267
MluNI TGGCCA 1 cut(s) 346
MmeI TCCRAC 2 cut(s) 340, 778
Mox20I TGGCCA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 1121
MroXI GAANNNNTTC 1 cut(s) 1212
MscI TGGCCA 1 cut(s) 346
MseI TTAA 1 cut(s) 462
MslI CAYNNNNRTG 4 cut(s) 329, 462, 863, 942
Msp20I TGGCCA 1 cut(s) 346
MspI CCGG 2 cut(s) 137, 1122
MspR9I CCNGG 3 cut(s) 138, 348, 417
MunI CAATTG 1 cut(s) 1134
Mva1269I GAATGC 1 cut(s) 343
MvaI CCWGG 2 cut(s) 348, 417
MvnI CGCG 1 cut(s) 603
MwoI GCNNNNNNNGC 1 cut(s) 446
NaeI GCCGGC 1 cut(s) 1123
NciI CCSGG 1 cut(s) 138
NdeII GATC 6 cut(s) 28, 247, 379, 432, 733, 762
NgoMIV GCCGGC 1 cut(s) 1121
NlaIII CATG 6 cut(s) 229, 540, 662, 838, 887, 943
NlaIV GGNNCC 3 cut(s) 309, 674, 1281
NmuCI GTSAC 5 cut(s) 98, 241, 629, 935, 1126
NspI RCATGY 2 cut(s) 540, 662
OliI CACNNNNGTG 1 cut(s) 329
PaeI GCATGC 1 cut(s) 540
PceI AGGCCT 1 cut(s) 197
PctI GAATGC 1 cut(s) 343
PdiI GCCGGC 1 cut(s) 1123
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 5 cut(s) 57, 651, 1172, 1183, 1338
PflFI GACNNNGTC 1 cut(s) 417
PflMI CCANNNNNTGG 1 cut(s) 547
PkrI GCNGC 5 cut(s) 95, 475, 585, 672, 1003
Psp6I CCWGG 2 cut(s) 346, 415
PspGI CCWGG 2 cut(s) 346, 415
PspN4I GGNNCC 3 cut(s) 309, 674, 1281
PspPI GGNCC 4 cut(s) 308, 316, 905, 1119
PstI CTGCAG 1 cut(s) 98
PstNI CAGNNNCTG 1 cut(s) 102
PsuI RGATCY 1 cut(s) 432
PsyI GACNNNGTC 1 cut(s) 417
RsaI GTAC 3 cut(s) 106, 794, 872
RsaNI GTAC 3 cut(s) 105, 793, 871
RseI CAYNNNNRTG 4 cut(s) 329, 462, 863, 942
SaqAI TTAA 1 cut(s) 462
SatI GCNGC 5 cut(s) 94, 474, 584, 671, 1002
Sau3AI GATC 6 cut(s) 28, 247, 379, 432, 733, 762
Sau96I GGNCC 4 cut(s) 308, 316, 905, 1119
ScrFI CCNGG 3 cut(s) 138, 348, 417
SduI GDGCHC 2 cut(s) 53, 369
SexAI ACCWGGT 1 cut(s) 415
SfaNI GCATC 1 cut(s) 923
SfcI CTRYAG 1 cut(s) 94
SinI GGWCC 1 cut(s) 308
SmiMI CAYNNNNRTG 4 cut(s) 329, 462, 863, 942
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
SphI GCATGC 1 cut(s) 540
Sse9I AATT 6 cut(s) 141, 468, 1005, 1086, 1134, 1267
SseBI AGGCCT 1 cut(s) 197
SsiI CCGC 3 cut(s) 603, 670, 811
SspMI CTAG 5 cut(s) 6, 90, 110, 636, 1037
StuI AGGCCT 1 cut(s) 197
StyD4I CCNGG 3 cut(s) 136, 346, 415
StyI CCWWGG 2 cut(s) 68, 192
TaaI ACNGT 2 cut(s) 104, 824
TaiI ACGT 3 cut(s) 243, 333, 876
TaqI TCGA 2 cut(s) 27, 957
TaqII GACCGA 1 cut(s) 426
TasI AATT 6 cut(s) 141, 468, 1005, 1086, 1134, 1267
TatI WGTACW 1 cut(s) 104
TauI GCSGC 1 cut(s) 673
TfiI GAWTC 5 cut(s) 57, 651, 1172, 1183, 1338
Tru1I TTAA 1 cut(s) 462
Tru9I TTAA 1 cut(s) 462
TscAI CASTG 1 cut(s) 103
TseFI GTSAC 5 cut(s) 98, 241, 629, 935, 1126
TseI GCWGC 4 cut(s) 93, 473, 583, 1001
Tsp45I GTSAC 5 cut(s) 98, 241, 629, 935, 1126
TspDTI ATGAA 4 cut(s) 214, 741, 885, 1166
TspGWI ACGGA 2 cut(s) 67, 260
TspRI CASTG 1 cut(s) 103
Tth111I GACNNNGTC 1 cut(s) 417
Van91I CCANNNNNTGG 1 cut(s) 547
VneI GTGCAC 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 308
XapI RAATTY 3 cut(s) 141, 1086, 1267
XceI RCATGY 2 cut(s) 540, 662
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 1212
XspI CTAG 5 cut(s) 6, 90, 110, 636, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.