MD10G1076700.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
10894543 .. 10899191
4649 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1076700.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGGCAGTTCTCGGAGAGACAACCGAAGCCTCAAACAACTCCCTCTCCCACAAGATCACCGCCAAAACCCCATTATTCAACCTCAAACTCTACGCTGTTATCGCCATCCTCGTCCTCTGCCTCCTCGCAGCCGCCCTTCTCATCTTCCTCTGCCTCCGCATAACTCGAGTCTCCCGAAAACGCAAGATGCGCGTGAAGCACAGCTCCGGCTCAATCCCCCTAGTCTCCAAGGAGATCGCCGAGATCAAGGAACCGAGTCCACGCGCCGCCGACAATGGCGAGAGAAAAATGGGAAATGAAAAGTTGAAGGAAGCTCCGCTGGAGGTGACGGAGATTGTTGACATCGAAAGAGGGAAAGGGAACCGGAGCGGGTTGGAAAGTGACGGGTCGGGCCCGCATAACATCGGGTGGGGCCGGTGGTACAGCTTGAAGGAGCTGGAGATCGCGACACGCGGGTTTTCTCCACAGAACGTGATTGGAGAAGGAGGATACGGCATCGTCTACAGCGGCGAGCTGCAGGACGGCTCTGTCGTGGCCGTCAAGAACCTTCTGAACAACAAGGGTCAGGCAGAGAACGAGTTTAAGGTGGAAGTCGAAGCCATTGGGAAAGTAAAGCATAAGAACTTGGTGGGTCTAATTGGTTATTGTGCAGAAGGTGCTCAAAGGATGCTTGTGTACGAGTACATTGACAACGGCAACTTGGAGCAATGGTTGCACGGCGATGTTGGGCCTGTCAGCCCTCTGACCTGGGATATTCGTATGAAAATCGCCATCGGGACAGCAAAAGGGCTGGCCTATTTGCATGAAGGGTTAGAACCCAAGGTGGTGCACCGTGATATAAAATCCAGTAACATTCTTCTGGATAGAAAGTGGAACGCAAAAGTATCAGATTTTGGTCTGGCCAAGCTCTTAGGATCGGAGGCAAGCTATGTGACTACACGCGTTATGGGGACATTCGGATATGTAGCTCCAGAATATGCAAGCACAGGTATGCTTAACGAGGGGAGTGATGTATATAGTTTCGGAGTTCTACTAATGGAGATAATTACAGGAAGAAACCCAATTGACTATTCCAAACCAGCAGGAGAGATGAACCTGGTTGATTGGTTTAAAGGAATGATCCAAAGTCGCCGTGGAGAGGATGTTGTTGATCCTCTGATTGCAGTTCAGCCCCCTCCAAGAGCTATGAAGCGAGTATTGCTGGTTTGTCTCCGATGTATAGATCTAGATGTCCATAAGCGACCGAAAATGGGGCAAATTGTTCATATGCTTGAGGCAGATGACTTCCCTTTTCGTTCAGAAACTCGATCAGCTCGATAA

Protein Analysis

440

Amino Acids

48.46

Weight (kDa)

8.73

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 156 - 424 1.7e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 156 - 422 6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 369
AccI GTMKAC 1 cut(s) 501
AccII CGCG 5 cut(s) 192, 264, 446, 453, 942
AciI CCGC 9 cut(s) 60, 132, 157, 267, 317, 369, 395, 453, 507
AclWI GGATC 3 cut(s) 922, 1114, 1145
AcoI YGGCCR 2 cut(s) 534, 900
AfaI GTAC 3 cut(s) 422, 677, 683
AfiI CCNNNNNNNGG 2 cut(s) 1138, 1250
AflIII ACRYGT 1 cut(s) 940
AgsI TTSAA 3 cut(s) 79, 307, 430
AjnI CCWGG 2 cut(s) 746, 1095
AjuI GAANNNNNNNTTGG 2 cut(s) 1054, 1086
Alw21I GWGCWC 2 cut(s) 661, 831
Alw26I GTCTC 4 cut(s) 11, 175, 229, 1214
Alw44I GTGCAC 1 cut(s) 827
AlwI GGATC 3 cut(s) 922, 1114, 1145
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 6 cut(s) 391, 412, 534, 728, 792, 900
ApaI GGGCCC 1 cut(s) 395
ApaLI GTGCAC 1 cut(s) 827
ApeKI GCWGC 2 cut(s) 128, 514
AspLEI GCGC 2 cut(s) 192, 266
AspS9I GGNCC 4 cut(s) 391, 392, 412, 728
AsuHPI GGTGA 2 cut(s) 49, 337
AvaI CYCGRG 1 cut(s) 165
BaeGI GKGCMC 2 cut(s) 395, 831
BalI TGGCCA 1 cut(s) 902
BanII GRGCYC 1 cut(s) 395
Bbv12I GWGCWC 2 cut(s) 661, 831
BbvI GCAGC 2 cut(s) 140, 501
BccI CCATC 2 cut(s) 113, 779
BceAI ACGGC 6 cut(s) 508, 521, 538, 709, 733, 1116
BciT130I CCWGG 2 cut(s) 748, 1097
BciVI GTATCC 1 cut(s) 482
BcoDI GTCTC 4 cut(s) 11, 175, 229, 1214
BfaI CTAG 2 cut(s) 221, 1226
BfmI CTRYAG 2 cut(s) 502, 515
BfuI GTATCC 1 cut(s) 482
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 5 cut(s) 129, 132, 267, 508, 515
BlsI GCNGC 5 cut(s) 130, 133, 268, 509, 516
Bme1390I CCNGG 2 cut(s) 748, 1097
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 4 cut(s) 391, 392, 412, 728
BmiI GGNNCC 4 cut(s) 252, 362, 393, 413
BmrFI CCNGG 2 cut(s) 748, 1097
BmsI GCATC 3 cut(s) 177, 504, 657
BpmI CTGGAG 3 cut(s) 341, 458, 954
BpuEI CTTGAG 1 cut(s) 1292
BsaJI CCNNGG 4 cut(s) 228, 747, 819, 1132
BsaWI WCCGGW 1 cut(s) 363
BsaXI ACNNNNNCTCC 6 cut(s) 29, 59, 695, 725, 1128, 1158
Bsc4I CCNNNNNNNGG 2 cut(s) 1138, 1250
Bse118I RCCGGY 1 cut(s) 414
Bse1I ACTGG 1 cut(s) 846
Bse3DI GCAATG 1 cut(s) 713
BseBI CCWGG 2 cut(s) 748, 1097
BseDI CCNNGG 4 cut(s) 228, 747, 819, 1132
BseGI GGATG 3 cut(s) 105, 672, 1147
BseLI CCNNNNNNNGG 2 cut(s) 1138, 1250
BseMI GCAATG 1 cut(s) 713
BseNI ACTGG 1 cut(s) 846
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 2 cut(s) 395, 831
BseXI GCAGC 2 cut(s) 140, 501
BsgI GTGCAG 1 cut(s) 669
Bsh1236I CGCG 5 cut(s) 192, 264, 446, 453, 942
Bsh1285I CGRYCG 1 cut(s) 1244
BshFI GGCC 6 cut(s) 393, 414, 536, 730, 794, 902
BsiEI CGRYCG 1 cut(s) 1244
BsiHKAI GWGCWC 2 cut(s) 661, 831
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 3 cut(s) 207, 364, 415
BslFI GGGAC 2 cut(s) 790, 964
BslI CCNNNNNNNGG 2 cut(s) 1138, 1250
BsmAI GTCTC 4 cut(s) 11, 175, 229, 1214
BsmFI GGGAC 2 cut(s) 790, 964
BsnI GGCC 6 cut(s) 393, 414, 536, 730, 794, 902
BsoBI CYCGRG 1 cut(s) 165
Bsp120I GGGCCC 1 cut(s) 391
Bsp1286I GDGCHC 3 cut(s) 395, 661, 831
Bsp143I GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
Bsp68I TCGCGA 1 cut(s) 446
BspACI CCGC 9 cut(s) 60, 132, 157, 267, 317, 369, 395, 453, 507
BspANI GGCC 6 cut(s) 393, 414, 536, 730, 794, 902
BspFNI CGCG 5 cut(s) 192, 264, 446, 453, 942
BspLI GGNNCC 4 cut(s) 252, 362, 393, 413
BspMAI CTGCAG 1 cut(s) 519
BspPI GGATC 3 cut(s) 922, 1114, 1145
BsrBI CCGCTC 1 cut(s) 369
BsrDI GCAATG 1 cut(s) 713
BsrFI RCCGGY 1 cut(s) 414
BsrI ACTGG 1 cut(s) 846
BssAI RCCGGY 1 cut(s) 414
BssECI CCNNGG 4 cut(s) 228, 747, 819, 1132
BssMI GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
BssT1I CCWWGG 2 cut(s) 228, 819
Bst2UI CCWGG 2 cut(s) 748, 1097
Bst4CI ACNGT 1 cut(s) 833
BstAPI GCANNNNNTGC 2 cut(s) 656, 712
BstC8I GCNNGC 5 cut(s) 395, 512, 792, 925, 982
BstDEI CTNAG 1 cut(s) 910
BstDSI CCRYGG 1 cut(s) 1132
BstF5I GGATG 3 cut(s) 105, 672, 1147
BstFNI CGCG 5 cut(s) 192, 264, 446, 453, 942
BstHHI GCGC 2 cut(s) 192, 266
BstKTI GATC 9 cut(s) 57, 237, 246, 444, 917, 1122, 1153, 1225, 1310
BstMAI GTCTC 4 cut(s) 11, 175, 229, 1214
BstMBI GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
BstMCI CGRYCG 1 cut(s) 1244
BstMWI GCNNNNNNNGC 6 cut(s) 101, 189, 196, 656, 712, 1198
BstNI CCWGG 2 cut(s) 748, 1097
BstSCI CCNGG 2 cut(s) 746, 1095
BstSFI CTRYAG 2 cut(s) 502, 515
BstSLI GKGCMC 2 cut(s) 395, 831
BstUI CGCG 5 cut(s) 192, 264, 446, 453, 942
BstV1I GCAGC 2 cut(s) 140, 501
BstX2I RGATCY 1 cut(s) 1222
BstYI RGATCY 1 cut(s) 1222
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 6 cut(s) 393, 414, 536, 730, 794, 902
BtgI CCRYGG 1 cut(s) 1132
BtgZI GCGATG 1 cut(s) 735
BtsCI GGATG 3 cut(s) 105, 672, 1147
BtuMI TCGCGA 1 cut(s) 446
Cac8I GCNNGC 5 cut(s) 395, 512, 792, 925, 982
CfoI GCGC 2 cut(s) 192, 266
Cfr10I RCCGGY 1 cut(s) 414
Cfr13I GGNCC 4 cut(s) 391, 392, 412, 728
CsiI ACCWGGT 1 cut(s) 1095
Csp6I GTAC 3 cut(s) 421, 676, 682
CviAII CATG 1 cut(s) 803
CviQI GTAC 3 cut(s) 421, 676, 682
DdeI CTNAG 1 cut(s) 910
DpnI GATC 9 cut(s) 56, 236, 245, 443, 916, 1121, 1152, 1224, 1309
DpnII GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
DraI TTTAAA 1 cut(s) 1111
DrdI GACNNNNNNGTC 1 cut(s) 527
DseDI GACNNNNNNGTC 1 cut(s) 527
EaeI YGGCCR 2 cut(s) 534, 900
Eco130I CCWWGG 2 cut(s) 228, 819
Eco24I GRGCYC 1 cut(s) 395
Eco88I CYCGRG 1 cut(s) 165
EcoRII CCWGG 2 cut(s) 746, 1095
EcoT14I CCWWGG 2 cut(s) 228, 819
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 2 cut(s) 228, 819
FaeI CATG 1 cut(s) 806
FaqI GGGAC 2 cut(s) 790, 964
FatI CATG 1 cut(s) 802
FauI CCCGC 3 cut(s) 362, 402, 446
FauNDI CATATG 1 cut(s) 1266
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 5 cut(s) 129, 132, 267, 508, 515
FokI GGATG 3 cut(s) 92, 679, 1154
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 5 cut(s) 129, 132, 267, 508, 515
FspBI CTAG 2 cut(s) 221, 1226
GlaI GCGC 2 cut(s) 191, 265
GluI GCNGC 5 cut(s) 129, 132, 267, 508, 515
GsuI CTGGAG 3 cut(s) 341, 458, 954
HaeIII GGCC 6 cut(s) 393, 414, 536, 730, 794, 902
HapII CCGG 3 cut(s) 207, 364, 415
HhaI GCGC 2 cut(s) 192, 266
Hin1II CATG 1 cut(s) 806
Hin6I GCGC 2 cut(s) 190, 264
HinP1I GCGC 2 cut(s) 190, 264
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HinfI GANTC 2 cut(s) 168, 256
HpaII CCGG 3 cut(s) 207, 364, 415
HphI GGTGA 2 cut(s) 49, 337
Hpy166II GTNNAC 5 cut(s) 260, 340, 502, 676, 829
Hpy188III TCNNGA 7 cut(s) 174, 445, 541, 775, 860, 971, 1226
Hpy8I GTNNAC 5 cut(s) 260, 340, 502, 676, 829
HpyAV CCTTC 7 cut(s) 146, 301, 424, 476, 557, 647, 800
HpyCH4III ACNGT 1 cut(s) 833
HpyCH4IV ACGT 1 cut(s) 471
HpyCH4V TGCA 7 cut(s) 517, 650, 715, 802, 829, 980, 1163
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 189, 196, 656, 712, 1198
HpyF3I CTNAG 1 cut(s) 910
HpySE526I ACGT 1 cut(s) 471
Hsp92II CATG 1 cut(s) 806
HspAI GCGC 2 cut(s) 190, 264
Kzo9I GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
LmnI GCTCC 6 cut(s) 209, 319, 366, 433, 703, 973
Lsp1109I GCAGC 2 cut(s) 140, 501
LweI GCATC 3 cut(s) 177, 504, 657
MabI ACCWGGT 1 cut(s) 1095
MaeI CTAG 2 cut(s) 221, 1226
MaeII ACGT 1 cut(s) 471
MaeIII GTNAC 4 cut(s) 325, 380, 848, 931
MalI GATC 9 cut(s) 56, 236, 245, 443, 916, 1121, 1152, 1224, 1309
MbiI CCGCTC 1 cut(s) 369
MboI GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
MboII GAAGA 3 cut(s) 136, 848, 1065
MfeI CAATTG 1 cut(s) 1062
MflI RGATCY 1 cut(s) 1222
MhlI GDGCHC 3 cut(s) 395, 661, 831
MlsI TGGCCA 1 cut(s) 902
MluCI AATT 4 cut(s) 636, 1044, 1062, 1257
MluI ACGCGT 1 cut(s) 940
MluNI TGGCCA 1 cut(s) 902
MlyI GAGTC 2 cut(s) 177, 265
MmeI TCCRAC 1 cut(s) 354
Mox20I TGGCCA 1 cut(s) 902
MscI TGGCCA 1 cut(s) 902
MseI TTAA 3 cut(s) 582, 996, 1110
MslI CAYNNNNRTG 2 cut(s) 720, 989
Msp20I TGGCCA 1 cut(s) 902
MspA1I CMGCKG 2 cut(s) 319, 507
MspI CCGG 3 cut(s) 207, 364, 415
MspR9I CCNGG 2 cut(s) 748, 1097
MunI CAATTG 1 cut(s) 1062
MvaI CCWGG 2 cut(s) 748, 1097
MvnI CGCG 5 cut(s) 192, 264, 446, 453, 942
MwoI GCNNNNNNNGC 6 cut(s) 101, 189, 196, 656, 712, 1198
NdeI CATATG 1 cut(s) 1266
NdeII GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
NlaIII CATG 1 cut(s) 806
NlaIV GGNNCC 4 cut(s) 252, 362, 393, 413
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 3 cut(s) 325, 380, 931
NruI TCGCGA 1 cut(s) 446
PaeR7I CTCGAG 1 cut(s) 165
PcsI WCGNNNNNNNCGW 4 cut(s) 108, 172, 528, 1312
PkrI GCNGC 5 cut(s) 130, 133, 268, 509, 516
PleI GAGTC 2 cut(s) 176, 264
PpsI GAGTC 2 cut(s) 176, 264
Psp6I CCWGG 2 cut(s) 746, 1095
PspGI CCWGG 2 cut(s) 746, 1095
PspN4I GGNNCC 4 cut(s) 252, 362, 393, 413
PspOMI GGGCCC 1 cut(s) 391
PspPI GGNCC 4 cut(s) 391, 392, 412, 728
PspXI VCTCGAGB 1 cut(s) 165
PstI CTGCAG 1 cut(s) 519
PsuI RGATCY 1 cut(s) 1222
RruI TCGCGA 1 cut(s) 446
RsaI GTAC 3 cut(s) 422, 677, 683
RsaNI GTAC 3 cut(s) 421, 676, 682
RseI CAYNNNNRTG 2 cut(s) 720, 989
SaqAI TTAA 3 cut(s) 582, 996, 1110
SatI GCNGC 5 cut(s) 129, 132, 267, 508, 515
Sau3AI GATC 9 cut(s) 54, 234, 243, 441, 914, 1119, 1150, 1222, 1307
Sau96I GGNCC 4 cut(s) 391, 392, 412, 728
SchI GAGTC 2 cut(s) 177, 265
ScrFI CCNGG 2 cut(s) 748, 1097
SduI GDGCHC 3 cut(s) 395, 661, 831
SexAI ACCWGGT 1 cut(s) 1095
SfaNI GCATC 3 cut(s) 177, 504, 657
SfcI CTRYAG 2 cut(s) 502, 515
Sfr274I CTCGAG 1 cut(s) 165
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 2 cut(s) 720, 989
SmlI CTYRAG 2 cut(s) 165, 1271
SmoI CTYRAG 2 cut(s) 165, 1271
Sse9I AATT 4 cut(s) 636, 1044, 1062, 1257
SsiI CCGC 9 cut(s) 60, 132, 157, 267, 317, 369, 395, 453, 507
SspMI CTAG 2 cut(s) 221, 1226
StyD4I CCNGG 2 cut(s) 746, 1095
StyI CCWWGG 2 cut(s) 228, 819
TaaI ACNGT 1 cut(s) 833
TaiI ACGT 1 cut(s) 474
TaqI TCGA 5 cut(s) 166, 345, 594, 1306, 1315
TaqII GACCGA 1 cut(s) 1258
TasI AATT 4 cut(s) 636, 1044, 1062, 1257
TatI WGTACW 1 cut(s) 681
TauI GCSGC 3 cut(s) 134, 269, 510
Tru1I TTAA 3 cut(s) 582, 996, 1110
Tru9I TTAA 3 cut(s) 582, 996, 1110
TseFI GTSAC 3 cut(s) 325, 380, 931
TseI GCWGC 2 cut(s) 128, 514
Tsp45I GTSAC 3 cut(s) 325, 380, 931
TspDTI ATGAA 6 cut(s) 312, 776, 819, 1106, 1202, 1253
TspGWI ACGGA 1 cut(s) 344
VneI GTGCAC 1 cut(s) 827
XbaI TCTAGA 1 cut(s) 1225
XcmI CCANNNNNNNNNTGG 1 cut(s) 1130
XhoI CTCGAG 1 cut(s) 165
XmiI GTMKAC 1 cut(s) 501
XspI CTAG 2 cut(s) 221, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.