pycom05g05790
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
7274649 .. 7277241
2593 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g05790.6

Sequence Viewer

Length: 1581 bp
ATGGCGGTTCCCAGCAAGACAACCGAAACTTCCAACAACTCCCTCTCCCACAAGCTCACCGCCAAAACCCCATTATTCAACCTCAAACTCTACGCCGTCATCGCCATCCTCGTTATCTGCCTCCTCTCCGCCGCCCTTCTCATCTTCCTCTGCCTCTGCAAAGCTCGAGTCTCCAGAAAACGCAAGATGCGCGTGAAGCACAGCTCAGGATCAATCCCCCTCGTCTCCAACGAGATCGCCGAGATCAAGGCCCCAAGTCCACGCGCCGCCGACAATTGCGAGCGGAAAATGGGAAATGAAAAGTTGAAGGAGGCTCCGCAGGAGGTGGCGGAGATTATTGACATCGAAAGAAGGAAAGTGAACCGGAGCGCGCTGGAGTGTGACGGGTTGGGCCCGCATAACATTGGGTGGGGCCGGTGGTATAGCTTGAAGGAGCTGGAGATCGCGACACGTGGATTTTCTCCAGAGAACGTGATTGGAGAAGGCGGATACGCCATCGTTTACCGGGGCGCGTTGCAGGACGGCTCCGTCGTGGCCGTCAAGAACCTTCTGAACAACAATTTCTTTTTCATCAACTCGAAACTCATTGCTGGTTGTCATGTGATGCACAGGGGTCAGGCAGAGAACGAGTTTAAGGTGGAAGTGGAAGCCATTGGGAAAGTAAAGCATAAGAACTTGGTGGGTCTAATTGGTTATTGTGCAGAAGGTGCTCAAAGGATGCTTGTGTATGAATACATTGACAATGGCAACTTGGAGCAATGGTTGCATGGCGATGTTGGCCCTGTCAGCCCTCTGACCTGGGATATTCGTATGAAAATCGCCATCGGGACAGTTTCTTGTTTCTCTGGCAGGCTGGCCTATTTGCATGAGGGGTTAGAACCCAAGGTGGTGCACCGTGATATAAAATCCAGCAACATTCTTCTGGATAGAAAGTGGAACCCGAAAGTATCAGATTTTGGTCTGGCCAAGCTCTTAGGATCTGAGGCCAGTCATGTGACTACACGCGTTATGGGGACATTCGGGTTAGTTCCTAACGATAAATATGTAGCTCCAGAATATGCAAGCACAGGCATGCTTAACGAGGGGAGTGACATATATAGTTTCGGAGTTCTACTTATGGAGATAATTACAGGAAGAAGCCCAATTGACTATTCCAGACCAGCCGGAGAGATGAACCTTGTTGATTGGTTTAAAGGAATGATCGATCAAAGTCACCGTGGAGAGGATGTTGTTGATCCTCTGATTGCAGTTCAGCCCCCTCCAAGAGCTATGAAGCGAGCATTGCTGGTTTGTCTTCGATGCATAGATTTAGATGTCCATAAGCGACCGAAAATGGGGCAAATTGTTCATATGCTTGAGGCAGATGACTTCCCTTTCCGTTCAGTAAGTCTTTGTGTTCAGTACTTTATAGATGCATTGCAGATAACATGTTTGATAATTTTGACAAGTTTCTTGCCAGTTTGTTATTTGTTCGATATCAAGACCACGGGAGCACTCATCTCCTCAATTAACATTTTATGCACTTTCAGCTTTCTCAGTATGCCAATCTCTGATCTGCAGGAAAATCGATCACCTCGATAA

Protein Analysis

527

Amino Acids

58.44

Weight (kDa)

8.53

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 283
AccII CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
AclWI GGATC 3 cut(s) 217, 985, 1229
AcoI YGGCCR 2 cut(s) 534, 963
AcvI CACGTG 1 cut(s) 452
AfaI GTAC 1 cut(s) 1403
AfiI CCNNNNNNNGG 2 cut(s) 1222, 1334
AflIII ACRYGT 3 cut(s) 449, 1003, 1427
AgsI TTSAA 3 cut(s) 79, 307, 430
AjnI CCWGG 1 cut(s) 797
AjuI GAANNNNNNNTTGG 2 cut(s) 1135, 1167
AluBI AGCT 9 cut(s) 55, 164, 204, 426, 436, 970, 1049, 1268, 1530
AluI AGCT 9 cut(s) 55, 164, 204, 426, 436, 970, 1049, 1268, 1530
Alw21I GWGCWC 3 cut(s) 712, 894, 1495
Alw26I GTCTC 2 cut(s) 175, 229
Alw44I GTGCAC 1 cut(s) 890
AlwI GGATC 3 cut(s) 217, 985, 1229
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 8 cut(s) 249, 391, 412, 534, 778, 855, 963, 984
ApaI GGGCCC 1 cut(s) 395
ApaLI GTGCAC 1 cut(s) 890
ArsI GACNNNNNNTTYG 2 cut(s) 153, 185
AspLEI GCGC 5 cut(s) 192, 266, 371, 373, 512
AspS9I GGNCC 5 cut(s) 250, 391, 392, 412, 779
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 3 cut(s) 49, 1205, 1563
AvaI CYCGRG 1 cut(s) 165
BaeGI GKGCMC 2 cut(s) 395, 894
BalI TGGCCA 1 cut(s) 965
BanII GRGCYC 1 cut(s) 395
BbrPI CACGTG 1 cut(s) 452
BbsI GAAGAC 1 cut(s) 1286
Bbv12I GWGCWC 3 cut(s) 712, 894, 1495
BccI CCATC 3 cut(s) 113, 503, 830
BceAI ACGGC 3 cut(s) 80, 521, 538
BcgI CGANNNNNNTGC 2 cut(s) 1547, 1581
BciT130I CCWGG 1 cut(s) 799
BciVI GTATCC 1 cut(s) 482
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 2 cut(s) 175, 229
BfmI CTRYAG 1 cut(s) 1556
BfuI GTATCC 1 cut(s) 482
BisI GCNGC 2 cut(s) 132, 267
BlsI GCNGC 2 cut(s) 133, 268
BmcAI AGTACT 1 cut(s) 1403
Bme1390I CCNGG 2 cut(s) 506, 799
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 5 cut(s) 250, 391, 392, 412, 779
BmiI GGNNCC 7 cut(s) 9, 252, 315, 393, 413, 526, 938
BmrFI CCNGG 2 cut(s) 506, 799
BmsI GCATC 5 cut(s) 177, 594, 708, 1289, 1402
BpiI GAAGAC 1 cut(s) 1286
BpmI CTGGAG 5 cut(s) 157, 395, 447, 458, 1035
Bpu10I CCTNAGC 1 cut(s) 205
BpuEI CTTGAG 1 cut(s) 1376
BpuMI CCSGG 1 cut(s) 506
Bsa29I ATCGAT 2 cut(s) 1203, 1567
BsaAI YACGTR 1 cut(s) 452
BsaJI CCNNGG 5 cut(s) 505, 798, 882, 1216, 1485
BsaWI WCCGGW 1 cut(s) 363
BsaXI ACNNNNNCTCC 6 cut(s) 29, 59, 746, 776, 1212, 1242
Bsc4I CCNNNNNNNGG 2 cut(s) 1222, 1334
Bse118I RCCGGY 1 cut(s) 414
Bse1I ACTGG 2 cut(s) 987, 1457
Bse3DI GCAATG 4 cut(s) 585, 764, 1280, 1415
BseBI CCWGG 1 cut(s) 799
BseCI ATCGAT 2 cut(s) 1203, 1567
BseDI CCNNGG 5 cut(s) 505, 798, 882, 1216, 1485
BseGI GGATG 3 cut(s) 105, 723, 1231
BseLI CCNNNNNNNGG 2 cut(s) 1222, 1334
BseMI GCAATG 4 cut(s) 585, 764, 1280, 1415
BseMII CTCAG 3 cut(s) 219, 972, 1549
BseNI ACTGG 2 cut(s) 987, 1457
BsePI GCGCGC 1 cut(s) 369
BseRI GAGGAG 2 cut(s) 113, 1492
BseSI GKGCMC 2 cut(s) 395, 894
BseYI CCCAGC 1 cut(s) 11
BsgI GTGCAG 1 cut(s) 720
Bsh1236I CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
Bsh1285I CGRYCG 1 cut(s) 1328
BshFI GGCC 8 cut(s) 251, 393, 414, 536, 780, 857, 965, 986
BshVI ATCGAT 2 cut(s) 1203, 1567
BsiEI CGRYCG 1 cut(s) 1328
BsiHKAI GWGCWC 3 cut(s) 712, 894, 1495
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 4 cut(s) 364, 415, 505, 1164
BslFI GGGAC 2 cut(s) 841, 1027
BslI CCNNNNNNNGG 2 cut(s) 1222, 1334
BsmAI GTCTC 2 cut(s) 175, 229
BsmBI CGTCTC 1 cut(s) 229
BsmFI GGGAC 2 cut(s) 841, 1027
BsnI GGCC 8 cut(s) 251, 393, 414, 536, 780, 857, 965, 986
BsoBI CYCGRG 1 cut(s) 165
Bsp120I GGGCCC 1 cut(s) 391
Bsp1286I GDGCHC 4 cut(s) 395, 712, 894, 1495
Bsp68I TCGCGA 1 cut(s) 446
BspANI GGCC 8 cut(s) 251, 393, 414, 536, 780, 857, 965, 986
BspCNI CTCAG 3 cut(s) 218, 973, 1548
BspDI ATCGAT 2 cut(s) 1203, 1567
BspFNI CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
BspLI GGNNCC 7 cut(s) 9, 252, 315, 393, 413, 526, 938
BspMAI CTGCAG 1 cut(s) 1560
BspPI GGATC 3 cut(s) 217, 985, 1229
BsrBI CCGCTC 1 cut(s) 283
BsrDI GCAATG 4 cut(s) 585, 764, 1280, 1415
BsrFI RCCGGY 1 cut(s) 414
BsrI ACTGG 2 cut(s) 987, 1457
BssAI RCCGGY 1 cut(s) 414
BssECI CCNNGG 5 cut(s) 505, 798, 882, 1216, 1485
BssHII GCGCGC 1 cut(s) 369
BssT1I CCWWGG 1 cut(s) 882
Bst2UI CCWGG 1 cut(s) 799
Bst4CI ACNGT 3 cut(s) 832, 896, 1217
BstAPI GCANNNNNTGC 2 cut(s) 707, 763
BstBAI YACGTR 1 cut(s) 452
BstC8I GCNNGC 8 cut(s) 281, 371, 395, 851, 855, 1063, 1073, 1278
BstDEI CTNAG 4 cut(s) 205, 973, 981, 1535
BstDSI CCRYGG 2 cut(s) 1216, 1485
BstF5I GGATG 3 cut(s) 105, 723, 1231
BstFNI CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
BstHHI GCGC 5 cut(s) 192, 266, 371, 373, 512
BstMAI GTCTC 2 cut(s) 175, 229
BstMCI CGRYCG 1 cut(s) 1328
BstMWI GCNNNNNNNGC 9 cut(s) 101, 189, 196, 707, 763, 777, 786, 1282, 1527
BstNI CCWGG 1 cut(s) 799
BstNSI RCATGY 2 cut(s) 1075, 1431
BstSCI CCNGG 2 cut(s) 504, 797
BstSFI CTRYAG 1 cut(s) 1556
BstSLI GKGCMC 2 cut(s) 395, 894
BstUI CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
BstV2I GAAGAC 1 cut(s) 1286
BstX2I RGATCY 1 cut(s) 977
BstYI RGATCY 1 cut(s) 977
Bsu15I ATCGAT 2 cut(s) 1203, 1567
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 8 cut(s) 251, 393, 414, 536, 780, 857, 965, 986
BsuTUI ATCGAT 2 cut(s) 1203, 1567
BtgI CCRYGG 2 cut(s) 1216, 1485
BtgZI GCGATG 2 cut(s) 85, 786
BtsCI GGATG 3 cut(s) 105, 723, 1231
BtuMI TCGCGA 1 cut(s) 446
Cac8I GCNNGC 8 cut(s) 281, 371, 395, 851, 855, 1063, 1073, 1278
CfoI GCGC 5 cut(s) 192, 266, 371, 373, 512
Cfr10I RCCGGY 1 cut(s) 414
Cfr13I GGNCC 5 cut(s) 250, 391, 392, 412, 779
ClaI ATCGAT 2 cut(s) 1203, 1567
Csp6I GTAC 1 cut(s) 1402
CviAII CATG 6 cut(s) 599, 767, 866, 992, 1072, 1428
CviQI GTAC 1 cut(s) 1402
DdeI CTNAG 4 cut(s) 205, 973, 981, 1535
DraI TTTAAA 1 cut(s) 1192
DrdI GACNNNNNNGTC 1 cut(s) 527
DseDI GACNNNNNNGTC 1 cut(s) 527
EaeI YGGCCR 2 cut(s) 534, 963
EciI GGCGGA 3 cut(s) 118, 344, 501
Eco130I CCWWGG 1 cut(s) 882
Eco24I GRGCYC 1 cut(s) 395
Eco32I GATATC 1 cut(s) 1477
Eco72I CACGTG 1 cut(s) 452
Eco88I CYCGRG 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 1 cut(s) 797
EcoRV GATATC 1 cut(s) 1477
EcoT14I CCWWGG 1 cut(s) 882
EcoT22I ATGCAT 2 cut(s) 1304, 1417
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 1 cut(s) 882
Esp3I CGTCTC 1 cut(s) 229
FaeI CATG 6 cut(s) 602, 770, 869, 995, 1075, 1431
FaqI GGGAC 2 cut(s) 841, 1027
FatI CATG 6 cut(s) 598, 766, 865, 991, 1071, 1427
FauI CCCGC 1 cut(s) 402
FauNDI CATATG 1 cut(s) 1350
Fnu4HI GCNGC 2 cut(s) 132, 267
FokI GGATG 3 cut(s) 92, 730, 1238
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 2 cut(s) 132, 267
GlaI GCGC 5 cut(s) 191, 265, 370, 372, 511
GluI GCNGC 2 cut(s) 132, 267
GsaI CCCAGC 1 cut(s) 15
GsuI CTGGAG 5 cut(s) 157, 395, 447, 458, 1035
HaeIII GGCC 8 cut(s) 251, 393, 414, 536, 780, 857, 965, 986
HapII CCGG 4 cut(s) 364, 415, 505, 1164
HhaI GCGC 5 cut(s) 192, 266, 371, 373, 512
Hin1II CATG 6 cut(s) 602, 770, 869, 995, 1075, 1431
Hin6I GCGC 5 cut(s) 190, 264, 369, 371, 510
HinP1I GCGC 5 cut(s) 190, 264, 369, 371, 510
HinfI GANTC 1 cut(s) 168
HpaII CCGG 4 cut(s) 364, 415, 505, 1164
HphI GGTGA 3 cut(s) 49, 1205, 1563
Hpy166II GTNNAC 4 cut(s) 260, 361, 502, 892
Hpy188I TCNGA 7 cut(s) 552, 795, 952, 982, 1106, 1242, 1552
Hpy8I GTNNAC 4 cut(s) 260, 361, 502, 892
Hpy99I CGWCG 1 cut(s) 533
HpyAV CCTTC 7 cut(s) 146, 301, 345, 424, 476, 557, 698
HpyCH4III ACNGT 3 cut(s) 832, 896, 1217
HpyCH4IV ACGT 2 cut(s) 451, 471
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 189, 196, 707, 763, 777, 786, 1282, 1527
HpyF3I CTNAG 4 cut(s) 205, 973, 981, 1535
HpySE526I ACGT 2 cut(s) 451, 471
Hsp92II CATG 6 cut(s) 602, 770, 869, 995, 1075, 1431
HspAI GCGC 5 cut(s) 190, 264, 369, 371, 510
LmnI GCTCC 7 cut(s) 319, 366, 433, 530, 754, 1054, 1490
LweI GCATC 5 cut(s) 177, 594, 708, 1289, 1402
MaeII ACGT 2 cut(s) 451, 471
MaeIII GTNAC 4 cut(s) 380, 994, 1088, 1211
MbiI CCGCTC 1 cut(s) 283
MboII GAAGA 4 cut(s) 136, 911, 1146, 1286
MfeI CAATTG 2 cut(s) 274, 1143
MflI RGATCY 1 cut(s) 977
MhlI GDGCHC 4 cut(s) 395, 712, 894, 1495
MlsI TGGCCA 1 cut(s) 965
MluCI AATT 8 cut(s) 274, 559, 687, 1125, 1143, 1341, 1437, 1506
MluI ACGCGT 1 cut(s) 1003
MluNI TGGCCA 1 cut(s) 965
MlyI GAGTC 1 cut(s) 177
MmeI TCCRAC 2 cut(s) 57, 252
Mox20I TGGCCA 1 cut(s) 965
Mph1103I ATGCAT 2 cut(s) 1304, 1417
MscI TGGCCA 1 cut(s) 965
MseI TTAA 4 cut(s) 633, 1077, 1191, 1509
MslI CAYNNNNRTG 2 cut(s) 771, 1070
Msp20I TGGCCA 1 cut(s) 965
MspI CCGG 4 cut(s) 364, 415, 505, 1164
MspR9I CCNGG 2 cut(s) 506, 799
MunI CAATTG 2 cut(s) 274, 1143
MvaI CCWGG 1 cut(s) 799
MvnI CGCG 6 cut(s) 192, 264, 371, 446, 512, 1005
MwoI GCNNNNNNNGC 9 cut(s) 101, 189, 196, 707, 763, 777, 786, 1282, 1527
NciI CCSGG 1 cut(s) 506
NdeI CATATG 1 cut(s) 1350
NlaIII CATG 6 cut(s) 602, 770, 869, 995, 1075, 1431
NlaIV GGNNCC 7 cut(s) 9, 252, 315, 393, 413, 526, 938
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 4 cut(s) 380, 994, 1088, 1211
NruI TCGCGA 1 cut(s) 446
NsiI ATGCAT 2 cut(s) 1304, 1417
NspI RCATGY 2 cut(s) 1075, 1431
PaeI GCATGC 1 cut(s) 1075
PaeR7I CTCGAG 1 cut(s) 165
PauI GCGCGC 1 cut(s) 369
PciI ACATGT 1 cut(s) 1427
PcsI WCGNNNNNNNCGW 5 cut(s) 108, 228, 237, 528, 1573
PkrI GCNGC 2 cut(s) 133, 268
PleI GAGTC 1 cut(s) 176
PmaCI CACGTG 1 cut(s) 452
PmlI CACGTG 1 cut(s) 452
PpsI GAGTC 1 cut(s) 176
Ppu21I YACGTR 1 cut(s) 452
PscI ACATGT 1 cut(s) 1427
Psp6I CCWGG 1 cut(s) 797
PspCI CACGTG 1 cut(s) 452
PspFI CCCAGC 1 cut(s) 11
PspGI CCWGG 1 cut(s) 797
PspN4I GGNNCC 7 cut(s) 9, 252, 315, 393, 413, 526, 938
PspOMI GGGCCC 1 cut(s) 391
PspPI GGNCC 5 cut(s) 250, 391, 392, 412, 779
PspXI VCTCGAGB 1 cut(s) 165
PstI CTGCAG 1 cut(s) 1560
PsuI RGATCY 1 cut(s) 977
PteI GCGCGC 1 cut(s) 369
RruI TCGCGA 1 cut(s) 446
RsaI GTAC 1 cut(s) 1403
RsaNI GTAC 1 cut(s) 1402
RseI CAYNNNNRTG 2 cut(s) 771, 1070
SaqAI TTAA 4 cut(s) 633, 1077, 1191, 1509
SatI GCNGC 2 cut(s) 132, 267
Sau96I GGNCC 5 cut(s) 250, 391, 392, 412, 779
ScaI AGTACT 1 cut(s) 1403
SchI GAGTC 1 cut(s) 177
ScrFI CCNGG 2 cut(s) 506, 799
SduI GDGCHC 4 cut(s) 395, 712, 894, 1495
SfaNI GCATC 5 cut(s) 177, 594, 708, 1289, 1402
SfcI CTRYAG 1 cut(s) 1556
Sfr274I CTCGAG 1 cut(s) 165
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 2 cut(s) 771, 1070
SmlI CTYRAG 2 cut(s) 165, 1355
SmoI CTYRAG 2 cut(s) 165, 1355
SphI GCATGC 1 cut(s) 1075
Sse9I AATT 8 cut(s) 274, 559, 687, 1125, 1143, 1341, 1437, 1506
StyD4I CCNGG 2 cut(s) 504, 797
StyI CCWWGG 1 cut(s) 882
TaaI ACNGT 3 cut(s) 832, 896, 1217
TaiI ACGT 2 cut(s) 454, 474
TaqI TCGA 8 cut(s) 166, 345, 578, 1203, 1297, 1473, 1567, 1576
TaqII GACCGA 1 cut(s) 1342
TasI AATT 8 cut(s) 274, 559, 687, 1125, 1143, 1341, 1437, 1506
TatI WGTACW 1 cut(s) 1401
TauI GCSGC 2 cut(s) 134, 269
Tru1I TTAA 4 cut(s) 633, 1077, 1191, 1509
Tru9I TTAA 4 cut(s) 633, 1077, 1191, 1509
TseFI GTSAC 4 cut(s) 380, 994, 1088, 1211
Tsp45I GTSAC 4 cut(s) 380, 994, 1088, 1211
TspDTI ATGAA 7 cut(s) 312, 559, 744, 827, 1187, 1286, 1337
TspGWI ACGGA 2 cut(s) 517, 1367
VneI GTGCAC 1 cut(s) 890
XceI RCATGY 2 cut(s) 1075, 1431
XhoI CTCGAG 1 cut(s) 165
ZrmI AGTACT 1 cut(s) 1403
Zsp2I ATGCAT 2 cut(s) 1304, 1417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.