Rw6G011320
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
19940342 .. 19944916
4575 bp
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UTR
Exon/CDS
Intron
Rw6G011320.1

Sequence Viewer

Length: 1317 bp
ATGTCGGATTCCGGCGACGAGATTCCATCTCCGAACACCTCCCTCTCCCACAAGCTCACCTCCAAAACCGAGCTCCTCAACCTCAAGCTCTACGTCGTGATCGCAATCCTCCTCGCCGGCGTCTTTGCCGTGTCCCTCCTCGTCTTCCTCTGCGTCCGCGCCCATCGGGTTTCGCGTCGCCGGAAGAGCCGCATCCGCGTGAAGCACAGCTCCGGCTCAATCCCGCTCGTCTCCAAAGAGATCGCCGAGATCAAGGAGCCTCGTCTGGATCCGTCTCCTCCTCCTGCCTCCGCCGCCGCCGAGGGCAAAATCGGAAACCAAAAGTTGAAGGAAGCGCGACCGACTGAACCAACCGTTGATGTGGAAAATGGGAAAAGGAGGAGCGGGGAGAGTGACGTGTTCGGGTGGGGCCGGTGGTATAGCCTCAGGGAGCTGGAGACCGCGACACGTGGATTCTCGCCAGAGAATGTGATTGGAGAAGGAGGGTACGGCGTCGTTTACCGGGGATCTTTGCAAGACGGCTCTGTTGTCGCCGTCAAGAACCTTCTTAATAACAAGGGTCAAGCTCAAACAGAGTTTAAGGTGGAAGTGGAAGCCATAGGAAAAGTAAAGCACAAGAACTTGGTTGGTCTAATTGGCTATTGTGCAGAGGGTGCTCAAAGGATGCTTGTATATGAATATATTGACAATGGGAATTTGGAGCAGTGGTTGCATGGTGATGTTGGGCCTGTTAGCCCTCTGACTTGGGATATCAGAATGAAGATAGCCATTGGAACCGCAAAAGGGCTGGCCTATTTACATGAAGGGTTAGAACCCAAAGTGGTGCACCGTGATATAAAATCCAGTAACATTCTTCTGGACAGAAAGTGGAACCCAAGAGTATCAGATTTCGGTTTGGCCAAACTCTTGGGACCTGAGTCAAGCTATGTGACTACACGTGTAATGGGAACATTTGGATATGTTTCTCCAGAGTATGCAAGTACAGGTATGCTTAATGAGGGGAGTGATGTATATAGTTTTGGAGTTCTACTTATGGAGATAATTACAGGAAGAAGCCCAATTGACTATTCCAGACCAGCTGGAGAGATGAACCTTGTTGATTGGTTTAAAGGAATGATTTCAAGTCGCCGTGGGGAGGAGATTTTAGATCCATTGATAGAAGTTCAGCCCCCTCCAAGATCTTTGAAGCGAGCATTGTTGGTTTGTCTCCGCTGTATAGATTTAGATGTCCATAAGCGGCCAAAAATGGGGCAAATTGTTCATATGCTTGAGGCAGAAGACTTTCCTTTTCGTTCGGAAACCCGATCAGCTCGATAG

Protein Analysis

438

Amino Acids

48.52

Weight (kDa)

9.03

Isoelectric Point (pI)

46.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 155 - 423 5.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 155 - 421 3.3e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 226, 384
AccII CGCG 5 cut(s) 159, 175, 198, 337, 443
AclWI GGATC 4 cut(s) 263, 276, 514, 1142
AcoI YGGCCR 2 cut(s) 897, 1238
AcsI RAATTY 1 cut(s) 694
AcvI CACGTG 2 cut(s) 449, 938
AcyI GRCGYC 2 cut(s) 120, 492
AfaI GTAC 2 cut(s) 488, 982
AfiI CCNNNNNNNGG 3 cut(s) 783, 1135, 1247
AflIII ACRYGT 4 cut(s) 396, 446, 935, 937
AgsI TTSAA 3 cut(s) 328, 1122, 1186
AjiI CACGTC 1 cut(s) 397
AjuI GAANNNNNNNTTGG 2 cut(s) 1051, 1083
AluBI AGCT 9 cut(s) 55, 73, 88, 210, 433, 566, 924, 1079, 1310
AluI AGCT 9 cut(s) 55, 73, 88, 210, 433, 566, 924, 1079, 1310
Alw21I GWGCWC 3 cut(s) 75, 658, 828
Alw26I GTCTC 4 cut(s) 235, 279, 431, 1211
Alw44I GTGCAC 1 cut(s) 824
AlwI GGATC 4 cut(s) 263, 276, 514, 1142
AoxI GGCC 5 cut(s) 409, 725, 789, 897, 1238
ApaLI GTGCAC 1 cut(s) 824
ApoI RAATTY 1 cut(s) 694
Asp700I GAANNNNTTC 2 cut(s) 1117, 1281
AspLEI GCGC 2 cut(s) 161, 337
AspS9I GGNCC 3 cut(s) 409, 725, 911
AsuC2I CCSGG 1 cut(s) 503
AsuHPI GGTGA 2 cut(s) 49, 728
AvaII GGWCC 1 cut(s) 911
AxyI CCTNAGG 1 cut(s) 425
BaeGI GKGCMC 1 cut(s) 828
BalI TGGCCA 1 cut(s) 899
BamHI GGATCC 1 cut(s) 268
BanII GRGCYC 1 cut(s) 75
BbrPI CACGTG 2 cut(s) 449, 938
BbsI GAAGAC 2 cut(s) 136, 1284
Bbv12I GWGCWC 3 cut(s) 75, 658, 828
BccI CCATC 2 cut(s) 34, 171
BceAI ACGGC 5 cut(s) 113, 505, 518, 535, 1113
BcnI CCSGG 1 cut(s) 503
BcoDI GTCTC 4 cut(s) 235, 279, 431, 1211
BglII AGATCT 1 cut(s) 1178
BisI GCNGC 4 cut(s) 190, 294, 297, 1238
BlsI GCNGC 4 cut(s) 191, 295, 298, 1239
Bme1390I CCNGG 1 cut(s) 503
Bme18I GGWCC 1 cut(s) 911
BmgBI CACGTC 1 cut(s) 397
BmgT120I GGNCC 3 cut(s) 409, 725, 911
BmiI GGNNCC 6 cut(s) 258, 270, 410, 775, 872, 912
BmrFI CCNGG 1 cut(s) 503
BmsI GCATC 2 cut(s) 201, 654
BoxI GACNNNNGTC 1 cut(s) 916
BpiI GAAGAC 2 cut(s) 136, 1284
BpmI CTGGAG 3 cut(s) 455, 951, 1101
BpuEI CTTGAG 2 cut(s) 68, 1289
BpuMI CCSGG 1 cut(s) 503
BsaAI YACGTR 2 cut(s) 449, 938
BsaBI GATNNNNATC 1 cut(s) 104
BsaHI GRCGYC 2 cut(s) 120, 492
BsaI GGTCTC 1 cut(s) 431
BsaJI CCNNGG 3 cut(s) 300, 502, 1129
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 3 cut(s) 783, 1135, 1247
Bse118I RCCGGY 2 cut(s) 116, 411
Bse1I ACTGG 1 cut(s) 843
Bse21I CCTNAGG 1 cut(s) 425
Bse8I GATNNNNATC 1 cut(s) 104
BseDI CCNNGG 3 cut(s) 300, 502, 1129
BseGI GGATG 2 cut(s) 192, 669
BseJI GATNNNNATC 1 cut(s) 104
BseLI CCNNNNNNNGG 3 cut(s) 783, 1135, 1247
BseMII CTCAG 2 cut(s) 439, 906
BseNI ACTGG 1 cut(s) 843
BseRI GAGGAG 7 cut(s) 65, 101, 128, 267, 270, 394, 1151
BseSI GKGCMC 1 cut(s) 828
BsgI GTGCAG 1 cut(s) 666
Bsh1236I CGCG 5 cut(s) 159, 175, 198, 337, 443
Bsh1285I CGRYCG 1 cut(s) 341
BshFI GGCC 5 cut(s) 411, 727, 791, 899, 1240
BsiEI CGRYCG 1 cut(s) 341
BsiHKAI GWGCWC 3 cut(s) 75, 658, 828
BsiSI CCGG 6 cut(s) 12, 117, 181, 213, 412, 502
BslFI GGGAC 2 cut(s) 118, 924
BslI CCNNNNNNNGG 3 cut(s) 783, 1135, 1247
BsmAI GTCTC 4 cut(s) 235, 279, 431, 1211
BsmBI CGTCTC 2 cut(s) 235, 279
BsmFI GGGAC 2 cut(s) 118, 924
BsnI GGCC 5 cut(s) 411, 727, 791, 899, 1240
Bso31I GGTCTC 1 cut(s) 431
Bsp1286I GDGCHC 3 cut(s) 75, 658, 828
Bsp143I GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
BspANI GGCC 5 cut(s) 411, 727, 791, 899, 1240
BspCNI CTCAG 2 cut(s) 438, 907
BspFNI CGCG 5 cut(s) 159, 175, 198, 337, 443
BspLI GGNNCC 6 cut(s) 258, 270, 410, 775, 872, 912
BspPI GGATC 4 cut(s) 263, 276, 514, 1142
BspQI GCTCTTC 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 431
BsrBI CCGCTC 2 cut(s) 226, 384
BsrFI RCCGGY 2 cut(s) 116, 411
BsrI ACTGG 1 cut(s) 843
BssAI RCCGGY 2 cut(s) 116, 411
BssECI CCNNGG 3 cut(s) 300, 502, 1129
BssMI GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
BssNI GRCGYC 2 cut(s) 120, 492
Bst4CI ACNGT 2 cut(s) 355, 830
Bst6I CTCTTC 1 cut(s) 179
BstACI GRCGYC 2 cut(s) 120, 492
BstAPI GCANNNNNTGC 2 cut(s) 653, 709
BstBAI YACGTR 2 cut(s) 449, 938
BstC8I GCNNGC 3 cut(s) 118, 789, 1191
BstDEI CTNAG 2 cut(s) 425, 915
BstDSI CCRYGG 1 cut(s) 1129
BstF5I GGATG 2 cut(s) 192, 669
BstFNI CGCG 5 cut(s) 159, 175, 198, 337, 443
BstHHI GCGC 2 cut(s) 161, 337
BstKTI GATC 8 cut(s) 102, 243, 252, 271, 509, 1150, 1181, 1307
BstMAI GTCTC 4 cut(s) 235, 279, 431, 1211
BstMBI GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
BstMCI CGRYCG 1 cut(s) 341
BstMWI GCNNNNNNNGC 5 cut(s) 186, 195, 293, 653, 709
BstPAI GACNNNNGTC 1 cut(s) 916
BstSCI CCNGG 1 cut(s) 501
BstSLI GKGCMC 1 cut(s) 828
BstUI CGCG 5 cut(s) 159, 175, 198, 337, 443
BstV2I GAAGAC 2 cut(s) 136, 1284
BstX2I RGATCY 4 cut(s) 268, 506, 1147, 1178
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 4 cut(s) 268, 506, 1147, 1178
Bsu36I CCTNAGG 1 cut(s) 425
BsuRI GGCC 5 cut(s) 411, 727, 791, 899, 1240
BtgI CCRYGG 1 cut(s) 1129
BtrI CACGTC 1 cut(s) 397
BtsCI GGATG 2 cut(s) 192, 669
BtsI GCAGTG 1 cut(s) 710
BtsIMutI CAGTG 1 cut(s) 710
Cac8I GCNNGC 3 cut(s) 118, 789, 1191
CfoI GCGC 2 cut(s) 161, 337
Cfr10I RCCGGY 2 cut(s) 116, 411
Cfr13I GGNCC 3 cut(s) 409, 725, 911
CseI GACGC 4 cut(s) 109, 142, 164, 481
Csp6I GTAC 2 cut(s) 487, 981
CviAII CATG 2 cut(s) 713, 800
CviQI GTAC 2 cut(s) 487, 981
DdeI CTNAG 2 cut(s) 425, 915
DpnI GATC 8 cut(s) 101, 242, 251, 270, 508, 1149, 1180, 1306
DpnII GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
DraI TTTAAA 1 cut(s) 1108
EaeI YGGCCR 2 cut(s) 897, 1238
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
EciI GGCGGA 1 cut(s) 280
Ecl136II GAGCTC 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 75
Eco31I GGTCTC 1 cut(s) 431
Eco32I GATATC 1 cut(s) 751
Eco47I GGWCC 1 cut(s) 911
Eco53kI GAGCTC 1 cut(s) 73
Eco72I CACGTG 2 cut(s) 449, 938
Eco81I CCTNAGG 1 cut(s) 425
EcoICRI GAGCTC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 911
EcoRV GATATC 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 75
Esp3I CGTCTC 2 cut(s) 235, 279
FaeI CATG 2 cut(s) 716, 803
FaqI GGGAC 2 cut(s) 118, 924
FatI CATG 2 cut(s) 712, 799
FauI CCCGC 2 cut(s) 231, 377
FauNDI CATATG 1 cut(s) 1263
Fnu4HI GCNGC 4 cut(s) 190, 294, 297, 1238
FokI GGATG 2 cut(s) 179, 676
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 4 cut(s) 190, 294, 297, 1238
GlaI GCGC 2 cut(s) 160, 336
GluI GCNGC 4 cut(s) 190, 294, 297, 1238
GsuI CTGGAG 3 cut(s) 455, 951, 1101
HaeIII GGCC 5 cut(s) 411, 727, 791, 899, 1240
HapII CCGG 6 cut(s) 12, 117, 181, 213, 412, 502
HgaI GACGC 4 cut(s) 109, 142, 164, 481
HhaI GCGC 2 cut(s) 161, 337
Hin1I GRCGYC 2 cut(s) 120, 492
Hin1II CATG 2 cut(s) 716, 803
Hin6I GCGC 2 cut(s) 159, 335
HinP1I GCGC 2 cut(s) 159, 335
HinfI GANTC 4 cut(s) 8, 22, 453, 917
HpaII CCGG 6 cut(s) 12, 117, 181, 213, 412, 502
HphI GGTGA 2 cut(s) 49, 728
Hpy166II GTNNAC 2 cut(s) 499, 826
Hpy188I TCNGA 7 cut(s) 7, 33, 314, 741, 755, 886, 1297
Hpy188III TCNNGA 6 cut(s) 97, 266, 538, 857, 968, 1071
Hpy8I GTNNAC 2 cut(s) 499, 826
Hpy99I CGWCG 4 cut(s) 20, 98, 180, 497
HpyAV CCTTC 4 cut(s) 322, 473, 554, 797
HpyCH4III ACNGT 2 cut(s) 355, 830
HpyCH4IV ACGT 4 cut(s) 93, 396, 448, 937
HpyCH4V TGCA 5 cut(s) 514, 647, 712, 826, 977
HpyF10VI GCNNNNNNNGC 5 cut(s) 186, 195, 293, 653, 709
HpyF3I CTNAG 2 cut(s) 425, 915
HpySE526I ACGT 4 cut(s) 93, 396, 448, 937
Hsp92I GRCGYC 2 cut(s) 120, 492
Hsp92II CATG 2 cut(s) 716, 803
HspAI GCGC 2 cut(s) 159, 335
KroI GCCGGC 1 cut(s) 116
KroNI GCCGGC 1 cut(s) 118
Kzo9I GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
LguI GCTCTTC 1 cut(s) 179
LmnI GCTCC 6 cut(s) 78, 215, 256, 381, 430, 700
LweI GCATC 2 cut(s) 201, 654
MaeII ACGT 4 cut(s) 93, 396, 448, 937
MaeIII GTNAC 3 cut(s) 392, 845, 928
MalI GATC 8 cut(s) 101, 242, 251, 270, 508, 1149, 1180, 1306
MbiI CCGCTC 2 cut(s) 226, 384
MboI GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
MboII GAAGA 6 cut(s) 136, 196, 772, 845, 1062, 1289
MfeI CAATTG 1 cut(s) 1059
MflI RGATCY 4 cut(s) 268, 506, 1147, 1178
MhlI GDGCHC 3 cut(s) 75, 658, 828
MlsI TGGCCA 1 cut(s) 899
MluCI AATT 5 cut(s) 633, 694, 1041, 1059, 1254
MluNI TGGCCA 1 cut(s) 899
MlyI GAGTC 1 cut(s) 926
Mox20I TGGCCA 1 cut(s) 899
MreI CGCCGGCG 1 cut(s) 116
MroNI GCCGGC 1 cut(s) 116
MroXI GAANNNNTTC 2 cut(s) 1117, 1281
MscI TGGCCA 1 cut(s) 899
MseI TTAA 4 cut(s) 549, 579, 993, 1107
MslI CAYNNNNRTG 2 cut(s) 197, 717
Msp20I TGGCCA 1 cut(s) 899
MspA1I CMGCKG 2 cut(s) 1079, 1212
MspI CCGG 6 cut(s) 12, 117, 181, 213, 412, 502
MspR9I CCNGG 1 cut(s) 503
MunI CAATTG 1 cut(s) 1059
MvnI CGCG 5 cut(s) 159, 175, 198, 337, 443
MwoI GCNNNNNNNGC 5 cut(s) 186, 195, 293, 653, 709
NaeI GCCGGC 1 cut(s) 118
NciI CCSGG 1 cut(s) 503
NdeI CATATG 1 cut(s) 1263
NdeII GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
NgoMIV GCCGGC 1 cut(s) 116
NlaIII CATG 2 cut(s) 716, 803
NlaIV GGNNCC 6 cut(s) 258, 270, 410, 775, 872, 912
NmeAIII GCCGAG 2 cut(s) 271, 325
NmuCI GTSAC 2 cut(s) 392, 928
PciSI GCTCTTC 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PdiI GCCGGC 1 cut(s) 118
PdmI GAANNNNTTC 2 cut(s) 1117, 1281
PfeI GAWTC 3 cut(s) 8, 22, 453
PkrI GCNGC 4 cut(s) 191, 295, 298, 1239
PleI GAGTC 1 cut(s) 925
PmaCI CACGTG 2 cut(s) 449, 938
PmlI CACGTG 2 cut(s) 449, 938
PpsI GAGTC 1 cut(s) 925
Ppu21I YACGTR 2 cut(s) 449, 938
PpuMI RGGWCCY 1 cut(s) 911
PshAI GACNNNNGTC 1 cut(s) 916
Psp124BI GAGCTC 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 911
PspCI CACGTG 2 cut(s) 449, 938
PspN4I GGNNCC 6 cut(s) 258, 270, 410, 775, 872, 912
PspPI GGNCC 3 cut(s) 409, 725, 911
PspPPI RGGWCCY 1 cut(s) 911
PsuI RGATCY 4 cut(s) 268, 506, 1147, 1178
PvuII CAGCTG 1 cut(s) 1079
RsaI GTAC 2 cut(s) 488, 982
RsaNI GTAC 2 cut(s) 487, 981
RseI CAYNNNNRTG 2 cut(s) 197, 717
SacI GAGCTC 1 cut(s) 75
SapI GCTCTTC 1 cut(s) 179
SaqAI TTAA 4 cut(s) 549, 579, 993, 1107
SatI GCNGC 4 cut(s) 190, 294, 297, 1238
Sau3AI GATC 8 cut(s) 99, 240, 249, 268, 506, 1147, 1178, 1304
Sau96I GGNCC 3 cut(s) 409, 725, 911
SchI GAGTC 1 cut(s) 926
ScrFI CCNGG 1 cut(s) 503
SduI GDGCHC 3 cut(s) 75, 658, 828
SfaNI GCATC 2 cut(s) 201, 654
SgrAI CRCCGGYG 1 cut(s) 116
SinI GGWCC 1 cut(s) 911
SmiMI CAYNNNNRTG 2 cut(s) 197, 717
SmlI CTYRAG 2 cut(s) 83, 1268
SmoI CTYRAG 2 cut(s) 83, 1268
Sse9I AATT 5 cut(s) 633, 694, 1041, 1059, 1254
SstI GAGCTC 1 cut(s) 75
StyD4I CCNGG 1 cut(s) 501
TaaI ACNGT 2 cut(s) 355, 830
TaiI ACGT 4 cut(s) 96, 399, 451, 940
TaqI TCGA 1 cut(s) 1312
TaqII GACCGA 1 cut(s) 355
TasI AATT 5 cut(s) 633, 694, 1041, 1059, 1254
TatI WGTACW 1 cut(s) 980
TauI GCSGC 4 cut(s) 192, 296, 299, 1240
TfiI GAWTC 3 cut(s) 8, 22, 453
Tru1I TTAA 4 cut(s) 549, 579, 993, 1107
Tru9I TTAA 4 cut(s) 549, 579, 993, 1107
TscAI CASTG 1 cut(s) 710
TseFI GTSAC 2 cut(s) 392, 928
Tsp45I GTSAC 2 cut(s) 392, 928
TspDTI ATGAA 5 cut(s) 690, 773, 816, 1103, 1250
TspGWI ACGGA 1 cut(s) 261
TspRI CASTG 1 cut(s) 710
VneI GTGCAC 1 cut(s) 824
VpaK11BI GGWCC 1 cut(s) 911
XapI RAATTY 1 cut(s) 694
XmnI GAANNNNTTC 2 cut(s) 1117, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.