Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0005693

Physical Location & Seq

Genomic Coordinates Forward (+)

16838940 .. 16846748

Gene Structure 7809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1103300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGTGGCTGCCGTTTCTGAAGCAGCTCCGGCCGGCCCACCGCCCAACCCCAAAGCCTCATCGGACCACCGCTCACGTCCCCATCTCCAAAACCCATCGAGGCCTCCTCTCTTACCTTCCGAGAAAGACAATGGCTTCGTTCAGAAGCGACCCAGAGGCCGGCAAGTCTCGTCGAAATACATGTCTCCTTCTCCTTCTTCTTCTTCAACCTCGACTTCAACTTCTACGGTCTCGTCCTCTGCGTCTTCCAGAAGATGCCCATCTCCATTGCTCTCAAGGTCCATAAACTCCGTTTCGAACTCGACCCCGCTTCCGGCTCAGAAAAGGGCTCAATCAGTGGACCGGCGGCGACCCATTACACCTCGGACCTCCGGCGGCCTCCCCGAGGCGAGGCTGAGCAATGCCGGTTCTGAAGTCTCTGCCGCCACTCGGCTTTTGGTCACTTCCACTCGGAGCTTATCGGTTTCGTTCCAAGGTGAGGCCTTTTCGCTTCCGATTAGTAAGACTAAGGCTGCAGCCTCGCCGAGTGGGACTGCGGCGAGGAAGGCCACGCCTGAGAGACGCCGGTCGACCCCTGTGAGAGGAGATCAGGCTGAGAATTCTAAGCCCGGTGATCAGCACCGGTGGCCGGCCAGGACTAGACAATTGAGCTCGGGTGGGACTAATAACTTGTTGTCCAGGAGCATGGACTGCAGCTCGGACAACAGGAAGCTCAGTGGGATTGGATCTGGGATTGTGGGTCGAGCATTGCAGCAATCCATGATTGATGAGAGCAGAAGAGCTTCTTTTGATGGTAGATTGAGCTTGGATTTGGGGAATGCTGAGCTTTTGAAGGATGCTAGGCAAAACCCAGATGCTAATTCGGCTCATGAGTCTTCTGTGCCATCTGATCTCACTGCTTCTGATACAGACAGTGTTTCTTCTGGTAGCACCTCAGGTGTGCAGGATGCTGGTGGTGCCGAAAAGGGTCGAACCTTACCTCGTGGCATTGCTGTGTCAGCGAGGTTTTGGCAGGAGACTAATAGCCGGTTGAGGCGGTTGCAGGATCCCGGTTCGCCTTCATCAACAAGCCCTGTGTCTAGAGCAGGAGCAAAATTCGTTCAATCTCAATTGAAAAGGTTTAATGGTGATGTCCCATTATCATCATCTTCCCGGACAATGGCTTCCCCCACTAGGGTACCAACTCGGCCTGCTTCGCCGGGTAAACTTTGGTCTTCTTCATCATTGTCACCATCAAGGGGTTATAGTCCTTCTCGGAGAAGTAGTGTTGAAAGTACCTTGAATAAGAGTTATTCTGGTCCTGCACCTTCAATTCTCAGTTTTTCTGTTGATACTCGGAGAGGGAAGATGGGGGAAGACAGGATTGTCGATGCACACATGCTCAGGCTTCTGTATAACCGTTATCTGCAATGGCGGTTTGTAAATGCAAGATCAGATGCTACCTTCATGGTGCAGAGGCGAAATGCCGAGAAAAACATGTGGAATGCATGGGTAACAACTTCAGAGCTCCGGCATTCTGTCACACTCAAAAAGATCAAGTTACTCTTGTTGAGGCAAAAATTGAAGTTAACTTCTATTCTCAGAGGACAAATTAGTTATTTGGAAGAATGGGGTCTTCTGGAAAGAGATCACTCTAGTTCTTTGCTAGGAGCAACTGAAGCTTTGCAGGCCAGTACTCTCCGTCTTCCAGTTGTGGGAAAAGCAATGGTTGACTTTCAAAAGCTGAAAGAAGCTGTGGGTTCGGCAGCTGATGTGATGCAGACAATGGCATCCTCGATATGCTCTCTTTCATCAAAGGTGGAGGAAATGAATTCCTTGGTGTGTGAACTTATGAAGGTTACCACGACAGAACGGGCTGTGCTTGAACAATGCAAAGATTTTTTGTCCACGTTATCTGCCATGCAGGTCAAGGATTGTAGCTTGAGAACCCATATAATACAATTACAACGTGTACCAACCCGAAGCCTGACAACACGTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QWRF

Protein Analysis

661

Amino Acids

71.42

Weight (kDa)

10.81

Isoelectric Point (pI)

64.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QWRF	PF04484	305 - 622	6.2e-112	QWRF family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49890 AT3G19570 AT3G19570 AT3G19570 AT3G19570 AT5G43160 AT5G43160
fragaria_vesca	FvH4_2g04080
malus_domestica	MD05G1097600.v1.1 MD05G1097800.v1.1 MD10G1103300.v1.1 MD11G1142200.v1.1
prunus_persica	Prupe.8G142000_v2.0.a1
pyrus_communis	pycom05g09590 pycom10g08900
rosa_chinensis	RchiOBHm_Chr6g0253431
rosa_laevigata	RLG00000015019
rosa_multiflora	Rmu_co7961360.1_g000001 Rmu_sc0001257.1_g000035 Rmu_sc0005426.1_g000013 Rmu_sc0025911.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211890
rosa_rugosa	Rorug05G0544200
rosa_samantha	Rh6AG059200 Rh6BG052700 Rh6CG050400 Rh6DG047100
rosa_wichuraiana	Rw0G004810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1364
Acc36I	ACCTGC	1 cut(s)	1894
Acc65I	GGTACC	1 cut(s)	1177
AccB1I	GGYRCC	2 cut(s)	956, 1177
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	569
AciI	CCGC	9 cut(s)	41, 70, 308, 346, 375, 423, 536, 1036, 1414
AclWI	GGATC	3 cut(s)	733, 1040, 1053
AcoI	YGGCCR	3 cut(s)	30, 626, 630
AcsI	RAATTY	3 cut(s)	598, 1094, 1810
AcuI	CTGAAG	4 cut(s)	39, 432, 1485, 1677
AcvI	CACGTG	1 cut(s)	1976
AcyI	GRCGYC	1 cut(s)	562
AfaI	GTAC	4 cut(s)	1179, 1276, 1675, 1953
AflIII	ACRYGT	5 cut(s)	180, 1476, 1948, 1973, 1975
AgeI	ACCGGT	1 cut(s)	621
AjiI	CACGTC	1 cut(s)	77
AjnI	CCWGG	2 cut(s)	632, 677
Alw21I	GWGCWC	2 cut(s)	653, 1509
Alw26I	GTCTC	6 cut(s)	172, 189, 235, 421, 553, 1010
AlwI	GGATC	3 cut(s)	733, 1040, 1053
Ama87I	CYCGRG	2 cut(s)	383, 652
ApeKI	GCWGC	7 cut(s)	8, 23, 512, 515, 693, 751, 1745
ApoI	RAATTY	3 cut(s)	598, 1094, 1810
ArsI	GACNNNNNNTTYG	4 cut(s)	119, 151, 167, 199
AsiGI	ACCGGT	1 cut(s)	621
Asp700I	GAANNNNTTC	1 cut(s)	781
Asp718I	GGTACC	1 cut(s)	1177
AspS9I	GGNCC	6 cut(s)	35, 64, 279, 340, 366, 1298
AsuC2I	CCSGG	4 cut(s)	609, 1050, 1153, 1200
AsuHPI	GGTGA	4 cut(s)	488, 623, 1139, 1221
AsuII	TTCGAA	1 cut(s)	296
AvaI	CYCGRG	2 cut(s)	383, 652
AvaII	GGWCC	5 cut(s)	64, 279, 340, 366, 1298
AxyI	CCTNAGG	1 cut(s)	934
BaeI	ACNNNNGTAYC	2 cut(s)	1161, 1194
BamHI	GGATCC	1 cut(s)	1045
BanI	GGYRCC	2 cut(s)	956, 1177
BanII	GRGCYC	3 cut(s)	331, 653, 1509
BauI	CACGAG	1 cut(s)	981
BbrPI	CACGTG	1 cut(s)	1976
BbsI	GAAGAC	6 cut(s)	237, 867, 1206, 1362, 1607, 1676
Bbv12I	GWGCWC	2 cut(s)	653, 1509
BbvI	GCAGC	6 cut(s)	35, 499, 527, 705, 763, 1757
BccI	CCATC	7 cut(s)	90, 103, 268, 785, 892, 1240, 1342
BciT130I	CCWGG	2 cut(s)	634, 679
BclI	TGATCA	1 cut(s)	613
BcnI	CCSGG	4 cut(s)	609, 1050, 1153, 1200
BcoDI	GTCTC	6 cut(s)	172, 189, 235, 421, 553, 1010
BfaI	CTAG	6 cut(s)	639, 840, 1080, 1173, 1635, 1646
BfmI	CTRYAG	2 cut(s)	513, 691
BfuAI	ACCTGC	1 cut(s)	1894
BlpI	GCTNAGC	2 cut(s)	395, 822
BmcAI	AGTACT	1 cut(s)	1675
Bme1390I	CCNGG	6 cut(s)	609, 634, 679, 1050, 1153, 1200
Bme18I	GGWCC	5 cut(s)	64, 279, 340, 366, 1298
BmeT110I	CYCGRG	2 cut(s)	383, 652
BmgBI	CACGTC	1 cut(s)	77
BmgT120I	GGNCC	6 cut(s)	35, 64, 279, 340, 366, 1298
BmiI	GGNNCC	3 cut(s)	958, 1047, 1179
BmrFI	CCNGG	6 cut(s)	609, 634, 679, 1050, 1153, 1200
BmsI	GCATC	8 cut(s)	245, 826, 844, 937, 1360, 1426, 1746, 1778
BoxI	GACNNNNGTC	1 cut(s)	565
BpiI	GAAGAC	6 cut(s)	237, 867, 1206, 1362, 1607, 1676
BplI	GAGNNNNNCTC	2 cut(s)	91, 123
Bpu10I	CCTNAGC	1 cut(s)	1382
Bpu1102I	GCTNAGC	2 cut(s)	395, 822
Bpu14I	TTCGAA	1 cut(s)	296
BpuEI	CTTGAG	2 cut(s)	259, 1942
BpuMI	CCSGG	4 cut(s)	609, 1050, 1153, 1200
BsaAI	YACGTR	1 cut(s)	1976
BsaBI	GATNNNNATC	1 cut(s)	259
BsaHI	GRCGYC	1 cut(s)	562
BsaI	GGTCTC	1 cut(s)	235
BsaJI	CCNNGG	4 cut(s)	362, 384, 472, 1815
BsaWI	WCCGGW	1 cut(s)	621
BsaXI	ACNNNNNCTCC	2 cut(s)	1249, 1279
Bse118I	RCCGGY	8 cut(s)	32, 159, 342, 404, 564, 621, 628, 1026
Bse1I	ACTGG	2 cut(s)	1671, 1688
Bse21I	CCTNAGG	1 cut(s)	934
Bse3DI	GCAATG	6 cut(s)	266, 406, 746, 987, 1415, 1710
Bse8I	GATNNNNATC	1 cut(s)	259
BseBI	CCWGG	2 cut(s)	634, 679
BseDI	CCNNGG	4 cut(s)	362, 384, 472, 1815
BseGI	GGATG	3 cut(s)	841, 952, 1769
BseJI	GATNNNNATC	1 cut(s)	259
BseMI	GCAATG	6 cut(s)	266, 406, 746, 987, 1415, 1710
BseNI	ACTGG	2 cut(s)	1671, 1688
BseRI	GAGGAG	2 cut(s)	96, 597
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	6 cut(s)	35, 499, 527, 705, 763, 1757
BsgI	GTGCAG	3 cut(s)	962, 1287, 1472
Bsh1285I	CGRYCG	2 cut(s)	33, 569
BshNI	GGYRCC	2 cut(s)	956, 1177
BshTI	ACCGGT	1 cut(s)	621
BsiEI	CGRYCG	2 cut(s)	33, 569
BsiHKAI	GWGCWC	2 cut(s)	653, 1509
BsiHKCI	CYCGRG	2 cut(s)	383, 652
BslFI	GGGAC	4 cut(s)	63, 544, 673, 1118
BsmAI	GTCTC	6 cut(s)	172, 189, 235, 421, 553, 1010
BsmBI	CGTCTC	1 cut(s)	553
BsmFI	GGGAC	4 cut(s)	63, 544, 673, 1118
BsmI	GAATGC	3 cut(s)	823, 1489, 1513
Bso31I	GGTCTC	1 cut(s)	235
BsoBI	CYCGRG	2 cut(s)	383, 652
Bsp119I	TTCGAA	1 cut(s)	296
Bsp1286I	GDGCHC	3 cut(s)	331, 653, 1509
Bsp143I	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
Bsp1720I	GCTNAGC	2 cut(s)	395, 822
BspACI	CCGC	9 cut(s)	41, 70, 308, 346, 375, 423, 536, 1036, 1414
BspHI	TCATGA	1 cut(s)	868
BspLI	GGNNCC	3 cut(s)	958, 1047, 1179
BspMAI	CTGCAG	2 cut(s)	517, 695
BspMI	ACCTGC	1 cut(s)	1894
BspPI	GGATC	3 cut(s)	733, 1040, 1053
BspQI	GCTCTTC	1 cut(s)	772
BspT104I	TTCGAA	1 cut(s)	296
BspT107I	GGYRCC	2 cut(s)	956, 1177
BspTNI	GGTCTC	1 cut(s)	235
BsrBI	CCGCTC	1 cut(s)	72
BsrDI	GCAATG	6 cut(s)	266, 406, 746, 987, 1415, 1710
BsrFI	RCCGGY	8 cut(s)	32, 159, 342, 404, 564, 621, 628, 1026
BsrI	ACTGG	2 cut(s)	1671, 1688
BssAI	RCCGGY	8 cut(s)	32, 159, 342, 404, 564, 621, 628, 1026
BssECI	CCNNGG	4 cut(s)	362, 384, 472, 1815
BssMI	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
BssNI	GRCGYC	1 cut(s)	562
BssSI	CACGAG	1 cut(s)	981
BssT1I	CCWWGG	2 cut(s)	472, 1815
Bst2BI	CACGAG	1 cut(s)	981
Bst2UI	CCWGG	2 cut(s)	634, 679
Bst4CI	ACNGT	3 cut(s)	229, 914, 1400
Bst6I	CTCTTC	1 cut(s)	772
BstACI	GRCGYC	1 cut(s)	562
BstAPI	GCANNNNNTGC	1 cut(s)	690
BstBAI	YACGTR	1 cut(s)	1976
BstBI	TTCGAA	1 cut(s)	296
BstC8I	GCNNGC	5 cut(s)	34, 161, 630, 1191, 1668
BstEII	GGTNACC	1 cut(s)	1837
BstENI	CCTNNNNNAGG	2 cut(s)	383, 579
BstF5I	GGATG	3 cut(s)	841, 952, 1769
BstKTI	GATC	8 cut(s)	589, 616, 728, 892, 1048, 1433, 1536, 1630
BstMAI	GTCTC	6 cut(s)	172, 189, 235, 421, 553, 1010
BstMBI	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
BstMCI	CGRYCG	2 cut(s)	33, 569
BstNI	CCWGG	2 cut(s)	634, 679
BstNSI	RCATGY	3 cut(s)	184, 1381, 1480
BstPAI	GACNNNNGTC	1 cut(s)	565
BstPI	GGTNACC	1 cut(s)	1837
BstSCI	CCNGG	6 cut(s)	607, 632, 677, 1048, 1151, 1198
BstSFI	CTRYAG	2 cut(s)	513, 691
BstV1I	GCAGC	6 cut(s)	35, 499, 527, 705, 763, 1757
BstV2I	GAAGAC	6 cut(s)	237, 867, 1206, 1362, 1607, 1676
BstX2I	RGATCY	2 cut(s)	725, 1045
BstXI	CCANNNNNNTGG	1 cut(s)	685
BstYI	RGATCY	2 cut(s)	725, 1045
BstZI	CGGCCG	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	934
BtrI	CACGTC	1 cut(s)	77
BtsCI	GGATG	3 cut(s)	841, 952, 1769
BtsI	GCAGTG	1 cut(s)	894
BtsIMutI	CAGTG	4 cut(s)	342, 721, 894, 919
BveI	ACCTGC	1 cut(s)	1894
Cac8I	GCNNGC	5 cut(s)	34, 161, 630, 1191, 1668
CciI	TCATGA	1 cut(s)	868
Cfr10I	RCCGGY	8 cut(s)	32, 159, 342, 404, 564, 621, 628, 1026
Cfr13I	GGNCC	6 cut(s)	35, 64, 279, 340, 366, 1298
CseI	GACGC	2 cut(s)	231, 570
Csp6I	GTAC	4 cut(s)	1178, 1275, 1674, 1952
CspAI	ACCGGT	1 cut(s)	621
CviAII	CATG	9 cut(s)	181, 685, 760, 869, 1378, 1447, 1477, 1488, 1900
CviQI	GTAC	4 cut(s)	1178, 1275, 1674, 1952
DpnI	GATC	8 cut(s)	588, 615, 727, 891, 1047, 1432, 1535, 1629
DpnII	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
DrdI	GACNNNNNNGTC	1 cut(s)	1364
DseDI	GACNNNNNNGTC	1 cut(s)	1364
EaeI	YGGCCR	3 cut(s)	30, 626, 630
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	1 cut(s)	772
EarI	CTCTTC	1 cut(s)	772
Ecl136II	GAGCTC	2 cut(s)	651, 1507
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	2 cut(s)	472, 1815
Eco147I	AGGCCT	2 cut(s)	103, 482
Eco24I	GRGCYC	3 cut(s)	331, 653, 1509
Eco31I	GGTCTC	1 cut(s)	235
Eco47I	GGWCC	5 cut(s)	64, 279, 340, 366, 1298
Eco52I	CGGCCG	1 cut(s)	30
Eco53kI	GAGCTC	2 cut(s)	651, 1507
Eco57I	CTGAAG	4 cut(s)	39, 432, 1485, 1677
Eco72I	CACGTG	1 cut(s)	1976
Eco81I	CCTNAGG	1 cut(s)	934
Eco88I	CYCGRG	2 cut(s)	383, 652
Eco91I	GGTNACC	1 cut(s)	1837
EcoICRI	GAGCTC	2 cut(s)	651, 1507
EcoNI	CCTNNNNNAGG	2 cut(s)	383, 579
EcoO65I	GGTNACC	1 cut(s)	1837
EcoRI	GAATTC	2 cut(s)	598, 1810
EcoRII	CCWGG	2 cut(s)	632, 677
EcoT14I	CCWWGG	2 cut(s)	472, 1815
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	3 cut(s)	331, 653, 1509
ErhI	CCWWGG	2 cut(s)	472, 1815
Esp3I	CGTCTC	1 cut(s)	553
FaeI	CATG	9 cut(s)	184, 688, 763, 872, 1381, 1450, 1480, 1491, 1903
FalI	AAGNNNNNCTT	4 cut(s)	769, 801, 1529, 1561
FaqI	GGGAC	4 cut(s)	63, 544, 673, 1118
FatI	CATG	9 cut(s)	180, 684, 759, 868, 1377, 1446, 1476, 1487, 1899
FauI	CCCGC	1 cut(s)	315
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	1 cut(s)	569
FokI	GGATG	3 cut(s)	848, 959, 1756
FriOI	GRGCYC	3 cut(s)	331, 653, 1509
FseI	GGCCGGCC	2 cut(s)	36, 632
FspBI	CTAG	6 cut(s)	639, 840, 1080, 1173, 1635, 1646
HgaI	GACGC	2 cut(s)	231, 570
Hin1I	GRCGYC	1 cut(s)	562
Hin1II	CATG	9 cut(s)	184, 688, 763, 872, 1381, 1450, 1480, 1491, 1903
HincII	GTYRAC	3 cut(s)	570, 1569, 1711
HindII	GTYRAC	3 cut(s)	570, 1569, 1711
HindIII	AAGCTT	1 cut(s)	1659
HinfI	GANTC	1 cut(s)	872
HpaI	GTTAAC	1 cut(s)	1569
HphI	GGTGA	4 cut(s)	488, 623, 1139, 1221
Hpy166II	GTNNAC	8 cut(s)	340, 570, 1205, 1569, 1711, 1826, 1887, 1952
Hpy188III	TCNNGA	4 cut(s)	249, 869, 1080, 1619
Hpy8I	GTNNAC	8 cut(s)	340, 570, 1205, 1569, 1711, 1826, 1887, 1952
Hpy99I	CGWCG	1 cut(s)	175
HpyCH4III	ACNGT	3 cut(s)	229, 914, 1400
HpyCH4IV	ACGT	4 cut(s)	76, 1889, 1948, 1975
HpySE526I	ACGT	4 cut(s)	76, 1889, 1948, 1975
Hsp92I	GRCGYC	1 cut(s)	562
Hsp92II	CATG	9 cut(s)	184, 688, 763, 872, 1381, 1450, 1480, 1491, 1903
KpnI	GGTACC	1 cut(s)	1181
KroI	GCCGGC	3 cut(s)	32, 159, 628
KroNI	GCCGGC	3 cut(s)	34, 161, 630
Ksp22I	TGATCA	1 cut(s)	613
KspAI	GTTAAC	1 cut(s)	1569
Kzo9I	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
LguI	GCTCTTC	1 cut(s)	772
LmnI	GCTCC	6 cut(s)	31, 453, 681, 1088, 1512, 1649
Lsp1109I	GCAGC	6 cut(s)	35, 499, 527, 705, 763, 1757
LweI	GCATC	8 cut(s)	245, 826, 844, 937, 1360, 1426, 1746, 1778
MaeI	CTAG	6 cut(s)	639, 840, 1080, 1173, 1635, 1646
MaeII	ACGT	4 cut(s)	76, 1889, 1948, 1975
MaeIII	GTNAC	6 cut(s)	439, 1227, 1492, 1519, 1539, 1837
MalI	GATC	8 cut(s)	588, 615, 727, 891, 1047, 1432, 1535, 1629
MbiI	CCGCTC	1 cut(s)	72
MboI	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
MfeI	CAATTG	2 cut(s)	644, 1109
MflI	RGATCY	2 cut(s)	725, 1045
MhlI	GDGCHC	3 cut(s)	331, 653, 1509
MlyI	GAGTC	1 cut(s)	881
Mph1103I	ATGCAT	1 cut(s)	1489
MroNI	GCCGGC	3 cut(s)	32, 159, 628
MroXI	GAANNNNTTC	1 cut(s)	781
MseI	TTAA	2 cut(s)	1122, 1568
MslI	CAYNNNNRTG	1 cut(s)	992
MspA1I	CMGCKG	1 cut(s)	1748
MspR9I	CCNGG	6 cut(s)	609, 634, 679, 1050, 1153, 1200
MunI	CAATTG	2 cut(s)	644, 1109
Mva1269I	GAATGC	3 cut(s)	823, 1489, 1513
MvaI	CCWGG	2 cut(s)	634, 679
NaeI	GCCGGC	3 cut(s)	34, 161, 630
NciI	CCSGG	4 cut(s)	609, 1050, 1153, 1200
NdeII	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
NgoMIV	GCCGGC	3 cut(s)	32, 159, 628
NlaIII	CATG	9 cut(s)	184, 688, 763, 872, 1381, 1450, 1480, 1491, 1903
NlaIV	GGNNCC	3 cut(s)	958, 1047, 1179
NmeAIII	GCCGAG	4 cut(s)	409, 549, 1165, 1492
NmuCI	GTSAC	3 cut(s)	439, 1227, 1519
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	3 cut(s)	184, 1381, 1480
NspV	TTCGAA	1 cut(s)	296
PagI	TCATGA	1 cut(s)	868
PceI	AGGCCT	2 cut(s)	103, 482
PciI	ACATGT	2 cut(s)	180, 1476
PciSI	GCTCTTC	1 cut(s)	772
PcsI	WCGNNNNNNNCGW	1 cut(s)	239
PctI	GAATGC	3 cut(s)	823, 1489, 1513
PdiI	GCCGGC	3 cut(s)	34, 161, 630
PdmI	GAANNNNTTC	1 cut(s)	781
PfoI	TCCNGGA	2 cut(s)	677, 1151
PinAI	ACCGGT	1 cut(s)	621
PleI	GAGTC	1 cut(s)	880
PmaCI	CACGTG	1 cut(s)	1976
PmlI	CACGTG	1 cut(s)	1976
PpsI	GAGTC	1 cut(s)	880
Ppu21I	YACGTR	1 cut(s)	1976
PscI	ACATGT	2 cut(s)	180, 1476
PshAI	GACNNNNGTC	1 cut(s)	565
Psp124BI	GAGCTC	2 cut(s)	653, 1509
Psp6I	CCWGG	2 cut(s)	632, 677
PspCI	CACGTG	1 cut(s)	1976
PspEI	GGTNACC	1 cut(s)	1837
PspGI	CCWGG	2 cut(s)	632, 677
PspN4I	GGNNCC	3 cut(s)	958, 1047, 1179
PspPI	GGNCC	6 cut(s)	35, 64, 279, 340, 366, 1298
PstI	CTGCAG	2 cut(s)	517, 695
PsuI	RGATCY	2 cut(s)	725, 1045
PvuII	CAGCTG	1 cut(s)	1748
RigI	GGCCGGCC	2 cut(s)	36, 632
RsaI	GTAC	4 cut(s)	1179, 1276, 1675, 1953
RsaNI	GTAC	4 cut(s)	1178, 1275, 1674, 1952
RseI	CAYNNNNRTG	1 cut(s)	992
SacI	GAGCTC	2 cut(s)	653, 1509
SalI	GTCGAC	1 cut(s)	568
SapI	GCTCTTC	1 cut(s)	772
SaqAI	TTAA	2 cut(s)	1122, 1568
Sau3AI	GATC	8 cut(s)	586, 613, 725, 889, 1045, 1430, 1533, 1627
Sau96I	GGNCC	6 cut(s)	35, 64, 279, 340, 366, 1298
ScaI	AGTACT	1 cut(s)	1675
SchI	GAGTC	1 cut(s)	881
ScrFI	CCNGG	6 cut(s)	609, 634, 679, 1050, 1153, 1200
SduI	GDGCHC	3 cut(s)	331, 653, 1509
SfaNI	GCATC	8 cut(s)	245, 826, 844, 937, 1360, 1426, 1746, 1778
SfcI	CTRYAG	2 cut(s)	513, 691
SfuI	TTCGAA	1 cut(s)	296
SgrAI	CRCCGGYG	1 cut(s)	621
SinI	GGWCC	5 cut(s)	64, 279, 340, 366, 1298
SmiMI	CAYNNNNRTG	1 cut(s)	992
SmlI	CTYRAG	2 cut(s)	274, 1921
SmoI	CTYRAG	2 cut(s)	274, 1921
SseBI	AGGCCT	2 cut(s)	103, 482
SsiI	CCGC	9 cut(s)	41, 70, 308, 346, 375, 423, 536, 1036, 1414
SspMI	CTAG	6 cut(s)	639, 840, 1080, 1173, 1635, 1646
SstI	GAGCTC	2 cut(s)	653, 1509
StuI	AGGCCT	2 cut(s)	103, 482
StyD4I	CCNGG	6 cut(s)	607, 632, 677, 1048, 1151, 1198
StyI	CCWWGG	2 cut(s)	472, 1815
TaaI	ACNGT	3 cut(s)	229, 914, 1400
TaiI	ACGT	4 cut(s)	79, 1892, 1951, 1978
TatI	WGTACW	1 cut(s)	1673
TauI	GCSGC	4 cut(s)	349, 378, 425, 539
Tru1I	TTAA	2 cut(s)	1122, 1568
Tru9I	TTAA	2 cut(s)	1122, 1568
TscAI	CASTG	4 cut(s)	342, 721, 901, 919
TseFI	GTSAC	3 cut(s)	439, 1227, 1519
TseI	GCWGC	7 cut(s)	8, 23, 512, 515, 693, 751, 1745
Tsp45I	GTSAC	3 cut(s)	439, 1227, 1519
TspDTI	ATGAA	6 cut(s)	1050, 1209, 1435, 1779, 1823, 1847
TspGWI	ACGGA	2 cut(s)	280, 1670
TspRI	CASTG	4 cut(s)	342, 721, 901, 919
VpaK11BI	GGWCC	5 cut(s)	64, 279, 340, 366, 1298
XagI	CCTNNNNNAGG	2 cut(s)	383, 579
XapI	RAATTY	3 cut(s)	598, 1094, 1810
XbaI	TCTAGA	1 cut(s)	1079
XceI	RCATGY	3 cut(s)	184, 1381, 1480
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XmiI	GTMKAC	1 cut(s)	569
XmnI	GAANNNNTTC	1 cut(s)	781
XspI	CTAG	6 cut(s)	639, 840, 1080, 1173, 1635, 1646
ZrmI	AGTACT	1 cut(s)	1675
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.