Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0005693

Physical Location & Seq

Genomic Coordinates Forward (+)

4995860 .. 5003623

Gene Structure 7764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG047100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGTGGCTGCCATTTCCGACCCGACCCATCTCCAGAACCAATCCCGGCCGCCGCTTCTTCCCTCAGACAATGCCTCCTCCGCTGCCGCCGCCGTTCAACGACGTGTCGTCCTCCGCGGCAGGCAGGTCTCCTCCAAGTACATGTCCACTCCTTCTCCTTCTTCTTCAACCTCGACTTCTACTACAACTACAGTCTCCTCCTCCTCCGCGTCTTCCAGAAGATGCCCTTCGCCGCTGCTCTCGCGGTCGATGAACTCGTCTCCGGCGCCGAATTCGGGCCCGAAACGGGCCCAATCGGCCGACCGGAGGCGACCCGGTACGCCCCGGACCCTACCGGAGCACCGGCTGAGCAATGCGGGTTCCGAAGTCTCCGCCGCCACCAGACTCCTCGTCACTTCCACCCGGAGCCTCTCGGTTTCGTTTCAGGGCGAGGCGTTTTCGCTTCCGATTAGTAAGACCAAGGCGGCGGCCGCGGCGGTAGGGGCTGCTCCGGCGAGGAAGGCCACGCCGGAGCGGCGGAGGTCGACGCCGGTGAGGAGGGAAGGAGGAGATCAGGTGGAGAATTCTAGGCCCTCCGGCGGTGGTGATCAGCACCGGTGGCCGGCCCGGAGTCGGCAACCGAATTCGAATTCGGGTTATTCGAACCCGAATTTGAGTAGGAGTATGGACTGTAGGAGTGTGGAGAAGAAGAGTGTGAATGTGAATGGGGTTGGATCTGGTGTGGTAGCTAGGGCGTTGCAGCAGTCTATGATTGAGGAGAGTAGAGGATCGAGGTCAAGATCGTCTTTTGATGGTAGGTTGAGCTTGGATTTGGGGCGTTTTGGGGGCAATGCTGAGGTTTTGAGGGGTGCTCAGCACAACCCAGATGCTAATAATGAGTCTTCTGTGCCGTCTGATCTCACTGCTTCCGATACAGACAGTGTTTCTTCGGGGAGCACTTCAGGTGTTCAGGACTCCAACAATGCGGCTGCTGCCAAGGCCGTCCGAGTGGCCGCCCCTCGCGGCATTGCTGTGTCTGCAAGGTTCTGGCAGGAGACGAATAGCAGGTTGCGGCGGTTGCAGGATCCCGGCTCACCTCTGGCGACTAGTCCTGTGTCGAGAGCAGGGGCGGCGGGGAAGTATATGCAGGCGAAAAAGTTCAATGGGGAGAATCCTGTGTCGTCTCCGAGGACAGTGGCTTCTCCCATTAGAGGAGCTACTAGGCCTGCTTCGCCGGGGAAGCTGTGGACGTCTTCGTCTTTGTCACCTTCGAGGGGGAATGCTAGTCCTTCTCGGGTGAGGAATAGTTTTAGTGGTCCTTTGAGTAGTGGTTATGCTGCTAGTACGCCTTCGTTTCTTAGTTTCTCTATTGATACTCGGAGAGGGAAGAAGGGGGAAGACCGCATTGTTGATGCACACATGCTCCGGCTTCTGTATAACCGTTATCTGCAGTGGCGGTTTGTAAATGCAAGAGCAGATGCTACATACATGGTGCAGAGAGTGAATGCAGAGGAAAATCTTTGGAATGCATGGGTAACTATCTCAGAGCTACGACATAATGTCACACTTAAAAGGATCAAGTTACTTTTGTTGAGGCATAAGTTGAAGCTAACTTCTATCCTCAAAGGACAAATTACTTATTTGGAAGAATGGGCTCTTCTGGATAGAGATCACTCTAGTTCTTTGCTAGGAGCGAATGAAGCTTTGCAAGCCAGTACCCTCCGTCTTCCGGTCGTTGGAAAAGCAATAGTTGACTTTCAAAAGCTGAAAGATTCTGTGGGCTCAGCGGCTGATGTGATGCAGGCAATGGCATCCTCGATATGCTCGCTTTCATCAAAGGTGGAAGAAATGAATTCCTTGGTATCTGAACTTGTGAAGGTGACTACAACAGAACGTCTTGTGCTTGAACAATGCAAAGATTTTTTGTCAACGTTATCAGCCATGCAAGTCAAGGACTGTAGCTTGAGAACACATATAATACAACTAAAACGTCTACCATTACCCGCAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QWRF

Protein Analysis

663

Amino Acids

71.14

Weight (kDa)

10.86

Isoelectric Point (pI)

62.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QWRF	PF04484	307 - 629	1.4e-113	QWRF family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49890 AT3G19570 AT3G19570 AT3G19570 AT3G19570 AT5G43160 AT5G43160
fragaria_vesca	FvH4_2g04080
malus_domestica	MD05G1097600.v1.1 MD05G1097800.v1.1 MD10G1103300.v1.1 MD11G1142200.v1.1
prunus_persica	Prupe.8G142000_v2.0.a1
pyrus_communis	pycom05g09590 pycom10g08900
rosa_chinensis	RchiOBHm_Chr6g0253431
rosa_laevigata	RLG00000015019
rosa_multiflora	Rmu_co7961360.1_g000001 Rmu_sc0001257.1_g000035 Rmu_sc0005426.1_g000013 Rmu_sc0025911.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211890
rosa_rugosa	Rorug05G0544200
rosa_samantha	Rh6AG059200 Rh6BG052700 Rh6CG050400 Rh6DG047100
rosa_wichuraiana	Rw0G004810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1234
AatII	GACGTC	1 cut(s)	1232
Acc36I	ACCTGC	2 cut(s)	115, 1035
AccB1I	GGYRCC	1 cut(s)	265
AccBSI	CCGCTC	1 cut(s)	514
AccI	GTMKAC	2 cut(s)	524, 1972
AccII	CGCG	5 cut(s)	117, 209, 244, 473, 1002
AclI	AACGTT	1 cut(s)	1910
AclWI	GGATC	5 cut(s)	721, 775, 1058, 1071, 1562
AcoI	YGGCCR	5 cut(s)	47, 297, 468, 599, 990
AcsI	RAATTY	6 cut(s)	271, 562, 622, 628, 649, 1831
AcuI	CTGAAG	1 cut(s)	924
AcyI	GRCGYC	3 cut(s)	266, 527, 1229
AfaI	GTAC	4 cut(s)	140, 319, 1324, 1696
AflIII	ACRYGT	2 cut(s)	103, 141
AgeI	ACCGGT	1 cut(s)	594
AgsI	TTSAA	6 cut(s)	98, 168, 1141, 1585, 1739, 1886
AhdI	GACNNNNNGTC	3 cut(s)	107, 389, 1538
AhlI	ACTAGT	1 cut(s)	1085
AjiI	CACGTC	1 cut(s)	104
AluBI	AGCT	9 cut(s)	728, 804, 1196, 1222, 1528, 1588, 1682, 1744, 1941
AluI	AGCT	9 cut(s)	728, 804, 1196, 1222, 1528, 1588, 1682, 1744, 1941
Alw21I	GWGCWC	3 cut(s)	342, 853, 938
Alw26I	GTCTC	6 cut(s)	133, 199, 264, 373, 1028, 1167
AlwI	GGATC	5 cut(s)	721, 775, 1058, 1071, 1562
AlwNI	CAGNNNCTG	1 cut(s)	1769
Ama87I	CYCGRG	1 cut(s)	1272
ApaI	GGGCCC	2 cut(s)	281, 292
ApeKI	GCWGC	9 cut(s)	8, 83, 235, 485, 739, 968, 971, 1316, 1985
ApoI	RAATTY	6 cut(s)	271, 562, 622, 628, 649, 1831
AsiGI	ACCGGT	1 cut(s)	594
Asp700I	GAANNNNTTC	1 cut(s)	1136
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	8 cut(s)	277, 278, 288, 289, 327, 570, 604, 1295
AsuC2I	CCSGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
AsuHPI	GGTGA	6 cut(s)	544, 596, 1065, 1236, 1288, 1870
AsuII	TTCGAA	2 cut(s)	626, 641
AvaI	CYCGRG	1 cut(s)	1272
AvaII	GGWCC	2 cut(s)	327, 1295
BaeGI	GKGCMC	2 cut(s)	281, 292
BamHI	GGATCC	1 cut(s)	1063
BanI	GGYRCC	1 cut(s)	265
BanII	GRGCYC	4 cut(s)	281, 292, 1636, 1763
BbsI	GAAGAC	5 cut(s)	204, 873, 1224, 1383, 1697
Bbv12I	GWGCWC	3 cut(s)	342, 853, 938
BbvCI	CCTCAGC	1 cut(s)	834
BbvI	GCAGC	7 cut(s)	70, 222, 472, 751, 955, 958, 1303
BccI	CCATC	2 cut(s)	36, 785
BceAI	ACGGC	3 cut(s)	77, 874, 965
BclI	TGATCA	1 cut(s)	586
BcnI	CCSGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
BcoDI	GTCTC	6 cut(s)	133, 199, 264, 373, 1028, 1167
BcuI	ACTAGT	1 cut(s)	1085
BfaI	CTAG	8 cut(s)	567, 729, 1086, 1200, 1263, 1320, 1656, 1667
BfmI	CTRYAG	4 cut(s)	189, 670, 1427, 1936
BfoI	RGCGCY	1 cut(s)	269
BfuAI	ACCTGC	2 cut(s)	115, 1035
BglI	GCCNNNNNGGC	2 cut(s)	296, 514
BlpI	GCTNAGC	3 cut(s)	347, 852, 1762
Bme1390I	CCNGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
Bme18I	GGWCC	2 cut(s)	327, 1295
BmeRI	GACNNNNNGTC	3 cut(s)	107, 389, 1538
BmeT110I	CYCGRG	1 cut(s)	1272
BmgBI	CACGTC	1 cut(s)	104
BmgT120I	GGNCC	8 cut(s)	277, 278, 288, 289, 327, 570, 604, 1295
BmiI	GGNNCC	7 cut(s)	267, 279, 290, 329, 361, 407, 1065
BmrFI	CCNGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
BmsI	GCATC	6 cut(s)	212, 856, 1381, 1447, 1767, 1799
BpiI	GAAGAC	5 cut(s)	204, 873, 1224, 1383, 1697
BplI	GAGNNNNNCTC	2 cut(s)	835, 867
BpmI	CTGGAG	1 cut(s)	17
Bpu10I	CCTNAGC	1 cut(s)	834
Bpu1102I	GCTNAGC	3 cut(s)	347, 852, 1762
Bpu14I	TTCGAA	2 cut(s)	626, 641
BpuEI	CTTGAG	1 cut(s)	1963
BpuMI	CCSGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
BsaBI	GATNNNNATC	1 cut(s)	1647
BsaHI	GRCGYC	3 cut(s)	266, 527, 1229
BsaI	GGTCTC	1 cut(s)	133
BsaJI	CCNNGG	8 cut(s)	115, 323, 459, 471, 975, 1166, 1214, 1836
BsaWI	WCCGGW	4 cut(s)	303, 334, 594, 1708
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 89, 139, 169, 540, 570, 1386, 1416
Bse118I	RCCGGY	4 cut(s)	342, 529, 594, 601
Bse1I	ACTGG	1 cut(s)	1692
Bse3DI	GCAATG	4 cut(s)	358, 835, 1005, 1791
Bse8I	GATNNNNATC	1 cut(s)	1647
BseDI	CCNNGG	8 cut(s)	115, 323, 459, 471, 975, 1166, 1214, 1836
BseGI	GGATG	1 cut(s)	1790
BseJI	GATNNNNATC	1 cut(s)	1647
BseMI	GCAATG	4 cut(s)	358, 835, 1005, 1791
BseMII	CTCAG	6 cut(s)	78, 338, 825, 866, 1536, 1776
BseNI	ACTGG	1 cut(s)	1692
BseSI	GKGCMC	2 cut(s)	281, 292
BseX3I	CGGCCG	3 cut(s)	47, 297, 468
BseXI	GCAGC	7 cut(s)	70, 222, 472, 751, 955, 958, 1303
BsgI	GTGCAG	1 cut(s)	1493
Bsh1236I	CGCG	5 cut(s)	117, 209, 244, 473, 1002
Bsh1285I	CGRYCG	6 cut(s)	50, 248, 300, 304, 471, 1713
BshNI	GGYRCC	1 cut(s)	265
BshTI	ACCGGT	1 cut(s)	594
BsiEI	CGRYCG	6 cut(s)	50, 248, 300, 304, 471, 1713
BsiHKAI	GWGCWC	3 cut(s)	342, 853, 938
BsiHKCI	CYCGRG	1 cut(s)	1272
BsmAI	GTCTC	6 cut(s)	133, 199, 264, 373, 1028, 1167
BsmBI	CGTCTC	3 cut(s)	264, 1028, 1167
BsmI	GAATGC	3 cut(s)	1264, 1489, 1510
Bso31I	GGTCTC	1 cut(s)	133
BsoBI	CYCGRG	1 cut(s)	1272
Bsp119I	TTCGAA	2 cut(s)	626, 641
Bsp120I	GGGCCC	2 cut(s)	277, 288
Bsp1286I	GDGCHC	7 cut(s)	281, 292, 342, 853, 938, 1636, 1763
Bsp143I	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
Bsp1720I	GCTNAGC	3 cut(s)	347, 852, 1762
BspCNI	CTCAG	6 cut(s)	77, 339, 826, 865, 1535, 1775
BspFNI	CGCG	5 cut(s)	117, 209, 244, 473, 1002
BspLI	GGNNCC	7 cut(s)	267, 279, 290, 329, 361, 407, 1065
BspMAI	CTGCAG	1 cut(s)	1431
BspMI	ACCTGC	2 cut(s)	115, 1035
BspPI	GGATC	5 cut(s)	721, 775, 1058, 1071, 1562
BspQI	GCTCTTC	1 cut(s)	1641
BspT104I	TTCGAA	2 cut(s)	626, 641
BspT107I	GGYRCC	1 cut(s)	265
BspTNI	GGTCTC	1 cut(s)	133
BsrBI	CCGCTC	1 cut(s)	514
BsrDI	GCAATG	4 cut(s)	358, 835, 1005, 1791
BsrFI	RCCGGY	4 cut(s)	342, 529, 594, 601
BsrI	ACTGG	1 cut(s)	1692
BssAI	RCCGGY	4 cut(s)	342, 529, 594, 601
BssECI	CCNNGG	8 cut(s)	115, 323, 459, 471, 975, 1166, 1214, 1836
BssMI	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
BssNI	GRCGYC	3 cut(s)	266, 527, 1229
BssT1I	CCWWGG	3 cut(s)	459, 975, 1836
Bst4CI	ACNGT	6 cut(s)	193, 671, 920, 1174, 1421, 1937
Bst6I	CTCTTC	2 cut(s)	683, 1641
BstACI	GRCGYC	3 cut(s)	266, 527, 1229
BstBI	TTCGAA	2 cut(s)	626, 641
BstC8I	GCNNGC	7 cut(s)	122, 603, 1128, 1206, 1689, 1782, 1805
BstDEI	CTNAG	7 cut(s)	64, 347, 834, 852, 1337, 1522, 1762
BstDSI	CCRYGG	2 cut(s)	115, 471
BstF5I	GGATG	1 cut(s)	1790
BstFNI	CGCG	5 cut(s)	117, 209, 244, 473, 1002
BstH2I	RGCGCY	1 cut(s)	269
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	9 cut(s)	553, 589, 716, 770, 782, 898, 1066, 1557, 1651
BstMAI	GTCTC	6 cut(s)	133, 199, 264, 373, 1028, 1167
BstMBI	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
BstMCI	CGRYCG	6 cut(s)	50, 248, 300, 304, 471, 1713
BstNSI	RCATGY	2 cut(s)	145, 1402
BstSCI	CCNGG	7 cut(s)	44, 313, 323, 401, 605, 1066, 1213
BstSFI	CTRYAG	4 cut(s)	189, 670, 1427, 1936
BstSLI	GKGCMC	2 cut(s)	281, 292
BstUI	CGCG	5 cut(s)	117, 209, 244, 473, 1002
BstV1I	GCAGC	7 cut(s)	70, 222, 472, 751, 955, 958, 1303
BstV2I	GAAGAC	5 cut(s)	204, 873, 1224, 1383, 1697
BstX2I	RGATCY	2 cut(s)	713, 1063
BstYI	RGATCY	2 cut(s)	713, 1063
BstZI	CGGCCG	3 cut(s)	47, 297, 468
BtgI	CCRYGG	2 cut(s)	115, 471
BtrI	CACGTC	1 cut(s)	104
BtsCI	GGATG	1 cut(s)	1790
BtsI	GCAGTG	2 cut(s)	900, 1436
BtsIMutI	CAGTG	4 cut(s)	900, 925, 1179, 1436
BveI	ACCTGC	2 cut(s)	115, 1035
Cac8I	GCNNGC	7 cut(s)	122, 603, 1128, 1206, 1689, 1782, 1805
CaiI	CAGNNNCTG	1 cut(s)	1769
CciNI	GCGGCCGC	1 cut(s)	468
CfoI	GCGC	1 cut(s)	268
Cfr10I	RCCGGY	4 cut(s)	342, 529, 594, 601
Cfr13I	GGNCC	8 cut(s)	277, 278, 288, 289, 327, 570, 604, 1295
Cfr42I	CCGCGG	2 cut(s)	118, 474
CseI	GACGC	2 cut(s)	198, 535
Csp6I	GTAC	4 cut(s)	139, 318, 1323, 1695
CspAI	ACCGGT	1 cut(s)	594
CviAII	CATG	5 cut(s)	142, 1399, 1468, 1509, 1921
CviQI	GTAC	4 cut(s)	139, 318, 1323, 1695
DdeI	CTNAG	7 cut(s)	64, 347, 834, 852, 1337, 1522, 1762
DinI	GGCGCC	1 cut(s)	267
DpnI	GATC	9 cut(s)	552, 588, 715, 769, 781, 897, 1065, 1556, 1650
DpnII	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
DrdI	GACNNNNNNGTC	1 cut(s)	1234
DriI	GACNNNNNGTC	3 cut(s)	107, 389, 1538
DseDI	GACNNNNNNGTC	1 cut(s)	1234
EaeI	YGGCCR	5 cut(s)	47, 297, 468, 599, 990
EagI	CGGCCG	3 cut(s)	47, 297, 468
Eam1104I	CTCTTC	2 cut(s)	683, 1641
Eam1105I	GACNNNNNGTC	3 cut(s)	107, 389, 1538
EarI	CTCTTC	2 cut(s)	683, 1641
EciI	GGCGGA	2 cut(s)	361, 532
EclXI	CGGCCG	3 cut(s)	47, 297, 468
Eco130I	CCWWGG	3 cut(s)	459, 975, 1836
Eco147I	AGGCCT	1 cut(s)	1204
Eco24I	GRGCYC	4 cut(s)	281, 292, 1636, 1763
Eco31I	GGTCTC	1 cut(s)	133
Eco47I	GGWCC	2 cut(s)	327, 1295
Eco52I	CGGCCG	3 cut(s)	47, 297, 468
Eco57I	CTGAAG	1 cut(s)	924
Eco88I	CYCGRG	1 cut(s)	1272
EcoO109I	RGGNCCY	1 cut(s)	570
EcoRI	GAATTC	5 cut(s)	271, 562, 622, 628, 1831
EcoT14I	CCWWGG	3 cut(s)	459, 975, 1836
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	4 cut(s)	281, 292, 1636, 1763
EgeI	GGCGCC	1 cut(s)	267
EheI	GGCGCC	1 cut(s)	267
ErhI	CCWWGG	3 cut(s)	459, 975, 1836
Esp3I	CGTCTC	3 cut(s)	264, 1028, 1167
FaeI	CATG	5 cut(s)	145, 1402, 1471, 1512, 1924
FalI	AAGNNNNNCTT	4 cut(s)	211, 243, 769, 801
FatI	CATG	5 cut(s)	141, 1398, 1467, 1508, 1920
FauI	CCCGC	3 cut(s)	349, 1105, 1990
FbaI	TGATCA	1 cut(s)	586
FblI	GTMKAC	2 cut(s)	524, 1972
FokI	GGATG	1 cut(s)	1777
FriOI	GRGCYC	4 cut(s)	281, 292, 1636, 1763
FseI	GGCCGGCC	1 cut(s)	605
FspBI	CTAG	8 cut(s)	567, 729, 1086, 1200, 1263, 1320, 1656, 1667
GlaI	GCGC	1 cut(s)	267
GsuI	CTGGAG	1 cut(s)	17
HaeII	RGCGCY	1 cut(s)	269
HgaI	GACGC	2 cut(s)	198, 535
HhaI	GCGC	1 cut(s)	268
Hin1I	GRCGYC	3 cut(s)	266, 527, 1229
Hin1II	CATG	5 cut(s)	145, 1402, 1471, 1512, 1924
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HincII	GTYRAC	3 cut(s)	525, 1732, 1908
HindII	GTYRAC	3 cut(s)	525, 1732, 1908
HindIII	AAGCTT	1 cut(s)	1680
HinfI	GANTC	6 cut(s)	384, 610, 878, 953, 1150, 1751
HphI	GGTGA	6 cut(s)	544, 596, 1065, 1236, 1288, 1870
Hpy166II	GTNNAC	6 cut(s)	147, 525, 1227, 1732, 1908, 1973
Hpy188III	TCNNGA	6 cut(s)	34, 216, 777, 950, 1098, 1640
Hpy8I	GTNNAC	6 cut(s)	147, 525, 1227, 1732, 1908, 1973
Hpy99I	CGWCG	2 cut(s)	105, 529
HpyCH4III	ACNGT	6 cut(s)	193, 671, 920, 1174, 1421, 1937
HpyCH4IV	ACGT	5 cut(s)	103, 1229, 1873, 1910, 1969
HpyF3I	CTNAG	7 cut(s)	64, 347, 834, 852, 1337, 1522, 1762
HpySE526I	ACGT	5 cut(s)	103, 1229, 1873, 1910, 1969
Hsp92I	GRCGYC	3 cut(s)	266, 527, 1229
Hsp92II	CATG	5 cut(s)	145, 1402, 1471, 1512, 1924
HspAI	GCGC	1 cut(s)	266
KasI	GGCGCC	1 cut(s)	265
KroI	GCCGGC	1 cut(s)	601
KroNI	GCCGGC	1 cut(s)	603
Ksp22I	TGATCA	1 cut(s)	586
KspI	CCGCGG	2 cut(s)	118, 474
Kzo9I	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
LguI	GCTCTTC	1 cut(s)	1641
LmnI	GCTCC	8 cut(s)	337, 405, 493, 511, 933, 1193, 1407, 1670
Lsp1109I	GCAGC	7 cut(s)	70, 222, 472, 751, 955, 958, 1303
LweI	GCATC	6 cut(s)	212, 856, 1381, 1447, 1767, 1799
MaeI	CTAG	8 cut(s)	567, 729, 1086, 1200, 1263, 1320, 1656, 1667
MaeII	ACGT	5 cut(s)	103, 1229, 1873, 1910, 1969
MaeIII	GTNAC	6 cut(s)	391, 1242, 1513, 1540, 1560, 1858
MalI	GATC	9 cut(s)	552, 588, 715, 769, 781, 897, 1065, 1556, 1650
MbiI	CCGCTC	1 cut(s)	514
MboI	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
MflI	RGATCY	2 cut(s)	713, 1063
MhlI	GDGCHC	7 cut(s)	281, 292, 342, 853, 938, 1636, 1763
MluCI	AATT	7 cut(s)	271, 562, 622, 628, 649, 1611, 1831
Mly113I	GGCGCC	1 cut(s)	266
MlyI	GAGTC	4 cut(s)	378, 619, 887, 947
MmeI	TCCRAC	4 cut(s)	42, 691, 981, 1696
Mph1103I	ATGCAT	1 cut(s)	1510
MroNI	GCCGGC	1 cut(s)	601
MroXI	GAANNNNTTC	1 cut(s)	1136
MseI	TTAA	1 cut(s)	1548
MslI	CAYNNNNRTG	1 cut(s)	1010
MspA1I	CMGCKG	5 cut(s)	83, 117, 235, 473, 1766
MspR9I	CCNGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
Mva1269I	GAATGC	3 cut(s)	1264, 1489, 1510
MvnI	CGCG	5 cut(s)	117, 209, 244, 473, 1002
NaeI	GCCGGC	1 cut(s)	603
NarI	GGCGCC	1 cut(s)	266
NciI	CCSGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
NdeII	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
NgoMIV	GCCGGC	1 cut(s)	601
NlaIII	CATG	5 cut(s)	145, 1402, 1471, 1512, 1924
NlaIV	GGNNCC	7 cut(s)	267, 279, 290, 329, 361, 407, 1065
NmuCI	GTSAC	4 cut(s)	391, 1242, 1540, 1858
NotI	GCGGCCGC	1 cut(s)	468
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	2 cut(s)	145, 1402
NspV	TTCGAA	2 cut(s)	626, 641
PceI	AGGCCT	1 cut(s)	1204
PciI	ACATGT	1 cut(s)	141
PciSI	GCTCTTC	1 cut(s)	1641
PcsI	WCGNNNNNNNCGW	2 cut(s)	254, 638
PctI	GAATGC	3 cut(s)	1264, 1489, 1510
PdiI	GCCGGC	1 cut(s)	603
PdmI	GAANNNNTTC	1 cut(s)	1136
PfeI	GAWTC	2 cut(s)	1150, 1751
PinAI	ACCGGT	1 cut(s)	594
PleI	GAGTC	4 cut(s)	378, 618, 886, 947
PluTI	GGCGCC	1 cut(s)	269
PpsI	GAGTC	4 cut(s)	378, 618, 886, 947
PscI	ACATGT	1 cut(s)	141
Psp1406I	AACGTT	1 cut(s)	1910
PspN4I	GGNNCC	7 cut(s)	267, 279, 290, 329, 361, 407, 1065
PspOMI	GGGCCC	2 cut(s)	277, 288
PspPI	GGNCC	8 cut(s)	277, 278, 288, 289, 327, 570, 604, 1295
PstI	CTGCAG	1 cut(s)	1431
PstNI	CAGNNNCTG	1 cut(s)	1769
PsuI	RGATCY	2 cut(s)	713, 1063
RigI	GGCCGGCC	1 cut(s)	605
RsaI	GTAC	4 cut(s)	140, 319, 1324, 1696
RsaNI	GTAC	4 cut(s)	139, 318, 1323, 1695
RseI	CAYNNNNRTG	1 cut(s)	1010
SacII	CCGCGG	2 cut(s)	118, 474
SalI	GTCGAC	1 cut(s)	523
SapI	GCTCTTC	1 cut(s)	1641
SaqAI	TTAA	1 cut(s)	1548
Sau3AI	GATC	9 cut(s)	550, 586, 713, 767, 779, 895, 1063, 1554, 1648
Sau96I	GGNCC	8 cut(s)	277, 278, 288, 289, 327, 570, 604, 1295
SchI	GAGTC	4 cut(s)	378, 619, 887, 947
ScrFI	CCNGG	7 cut(s)	46, 315, 325, 403, 607, 1068, 1215
SduI	GDGCHC	7 cut(s)	281, 292, 342, 853, 938, 1636, 1763
SfaNI	GCATC	6 cut(s)	212, 856, 1381, 1447, 1767, 1799
SfcI	CTRYAG	4 cut(s)	189, 670, 1427, 1936
SfiI	GGCCNNNNNGGCC	1 cut(s)	296
SfoI	GGCGCC	1 cut(s)	267
Sfr303I	CCGCGG	2 cut(s)	118, 474
SfuI	TTCGAA	2 cut(s)	626, 641
SgrAI	CRCCGGYG	2 cut(s)	529, 594
SgrBI	CCGCGG	2 cut(s)	118, 474
SinI	GGWCC	2 cut(s)	327, 1295
SmiMI	CAYNNNNRTG	1 cut(s)	1010
SmlI	CTYRAG	1 cut(s)	1942
SmoI	CTYRAG	1 cut(s)	1942
SpeI	ACTAGT	1 cut(s)	1085
Sse9I	AATT	7 cut(s)	271, 562, 622, 628, 649, 1611, 1831
SseBI	AGGCCT	1 cut(s)	1204
SspDI	GGCGCC	1 cut(s)	265
SspMI	CTAG	8 cut(s)	567, 729, 1086, 1200, 1263, 1320, 1656, 1667
StuI	AGGCCT	1 cut(s)	1204
StyD4I	CCNGG	7 cut(s)	44, 313, 323, 401, 605, 1066, 1213
StyI	CCWWGG	3 cut(s)	459, 975, 1836
TaaI	ACNGT	6 cut(s)	193, 671, 920, 1174, 1421, 1937
TaiI	ACGT	5 cut(s)	106, 1232, 1876, 1913, 1972
TaqI	TCGA	9 cut(s)	173, 248, 524, 626, 641, 770, 1097, 1250, 1796
TasI	AATT	7 cut(s)	271, 562, 622, 628, 649, 1611, 1831
TatI	WGTACW	1 cut(s)	138
TfiI	GAWTC	2 cut(s)	1150, 1751
Tru1I	TTAA	1 cut(s)	1548
Tru9I	TTAA	1 cut(s)	1548
TscAI	CASTG	4 cut(s)	907, 925, 1179, 1436
TseFI	GTSAC	4 cut(s)	391, 1242, 1540, 1858
TseI	GCWGC	9 cut(s)	8, 83, 235, 485, 739, 968, 971, 1316, 1985
Tsp45I	GTSAC	4 cut(s)	391, 1242, 1540, 1858
TspDTI	ATGAA	4 cut(s)	266, 1692, 1800, 1844
TspGWI	ACGGA	1 cut(s)	1691
TspRI	CASTG	4 cut(s)	907, 925, 1179, 1436
VpaK11BI	GGWCC	2 cut(s)	327, 1295
XapI	RAATTY	6 cut(s)	271, 562, 622, 628, 649, 1831
XceI	RCATGY	2 cut(s)	145, 1402
XmiI	GTMKAC	2 cut(s)	524, 1972
XmnI	GAANNNNTTC	1 cut(s)	1136
XspI	CTAG	8 cut(s)	567, 729, 1086, 1200, 1263, 1320, 1656, 1667
ZraI	GACGTC	1 cut(s)	1230
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.