Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005693

Physical Location & Seq

Genomic Coordinates Forward (+)

12785228 .. 12792066

Gene Structure 6839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g09590.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGATGGTGGCTGCCATTTCCGAAGCAGCTCCGACCGACCCGCCGTCTAACCCGAAAACCTCATCGGGCCACCGCTCACGGCCCCATCTCCAAAACCCATCAAGGCCTCCTCTCTTACCTTCCGAGAAAGACAATGGCTTCGTTCAGAGGCGACCCAGAGGCCGCCAAGTCTCGTCGAAATACATGTCTCCTTCGCCTTCTTCTTCGACCTCGACCTCGACTTCTACGGTCTCGTCCTCTGCGTCTTCCAGAAGATGCCCATCTCCGTTGCTCTCAAGGTCCATAAACTTGGCTTCGAACTCGACCCCTGTTCCGGCTCAGAAACGGGCTCAATCGGCGGACCGGCGGCGACCCATTACTCCTCGGACCTCCGCTGGCCTCCCCGAGGCTCGGGTGAGCAATGCCGGTTCCGAAGTCTCTGCTGCAACTCGGCTTTTGGTCACTTCCACTCGGAGCTTGTCGGTTTCGTTCCAAGGTGAGGCCTTTTCGCTTCCGATTAGCAAGACTAAGACTCCAGCCTCGCCTAGTGGGACTGCCGCGAGGAAGGCCACGCCTGAGAGACGCCGGTCGACCCCTGTGAGAGGAGATCAAGCTGAGAATTCTAAGCCATCTGATCAGCACCGGTGGCCGGCCAGGACTAGACAATTGAGCTTGGGTGGGACTAATAACTTGTCCAGGAGCATGGACTGCAGTTCGGACAACAGGAAGCTCAGTGGGATTGGATCTGGGATTGTGGGTCGAACACTGCAGCAATCCATGATTGATGAGAGCAGAAGAGCGTCTTTCGATGGTAGATTGTGCTTGGATTTGGGGAATGCTGAGCTTCTGAAGGATGCTAGGCAAAACCCAGATGCTAATTCTGCCCATGAATCCTCCGTGCCGTCTGATCTCACTGCTTCTGATACAGACAGTGTTTCTTCTGGTAGCACTTCAGGTGTGCAGGATGCTGGTGGTGCCAAAAAGGGTCGAACCTTACCCCGTGGCATTGCAGTGTCAGCAAGGTTTTGGCAGGAGACTAACAGCCGGTTGAGGCGGTTGCAGGATCCTGGTTCGCCTTTATCAACAACCCCTGTGTCTAGAGCAGGGGCAAAATTCGTTCAATCTCAATCGAAAAGGCTTAATGGTGATGTCCCATTATCATCGTCTCCCCGGACAATGGCTTCCCCCACTAGGGGACCAACTAGGCCTGCTTCGCCGGGTAAGCTTTGGACTTCTTCATCAATGTCACCATCAAGGGGTTATAGTCCTTCTCGGAGAAGTAGTGTTGAAAGTACCTTGAATAGGAGTTATTCTGGTCCTGCCCCTTCAATCCTCAGTTTTTCTGTTGACACTCGGAGAGGGAAGATGGGGGAAGATAGGATTGTCGATGCACACATGCTCAGGCTTCTGTATAACCGTTATCTGCAATGGCGGTTTGTAAATGCAAGATCAGATGCTACCTTCATGGTGCAGAGACGAAATGCCGAGAAAAACATGTGGAATGCATGGGTAACAACTTCAGAGCTCCGACATTCTGTCACACTCAAAAAGATCAAGTTACTCTTGTTGAGGCAAAAATTGAAGTTAACTTCTATCCTCAGAGGACAAATTAGTTGTTTGGAAGAATGGGGTCTTCTGGAAAAAGATCACTCTAGTTCTTTGCTAGGAGCAACTGAAGCTTTGCAGGCCAGTACTCTCCGTCTTCCAGTTGTGGGAAAAGCAATGGTTGACTTTCAAAAGCTGAAAGAAGCTGTGGGTTCGGCAGCTGATGTGATGCAGACAATGGTATCCTCGATATGCTATCTTTCATCAAAGGTGGAGGAAATGAATTCCTTGTTGTGTGAACTTATGAAGGTTACTGCAACAGAACGGGTTGTGCTTGAACAATGCAAAGATTTTTTGTCCACATTATCCGCCATGCAGGTCAAGGATTGTAGCTTGAGAACGCATATAATACAATTGCAACGTGTACCAACTATCCGAAGCCTGACAACACGTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QWRF

Protein Analysis

661

Amino Acids

71.7

Weight (kDa)

10.81

Isoelectric Point (pI)

65.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49890 AT3G19570 AT3G19570 AT3G19570 AT3G19570 AT5G43160 AT5G43160
fragaria_vesca	FvH4_2g04080
malus_domestica	MD05G1097600.v1.1 MD05G1097800.v1.1 MD10G1103300.v1.1 MD11G1142200.v1.1
prunus_persica	Prupe.8G142000_v2.0.a1
pyrus_communis	pycom05g09590 pycom10g08900
rosa_chinensis	RchiOBHm_Chr6g0253431
rosa_laevigata	RLG00000015019
rosa_multiflora	Rmu_co7961360.1_g000001 Rmu_sc0001257.1_g000035 Rmu_sc0005426.1_g000013 Rmu_sc0025911.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211890
rosa_rugosa	Rorug05G0544200
rosa_samantha	Rh6AG059200 Rh6BG052700 Rh6CG050400 Rh6DG047100
rosa_wichuraiana	Rw0G004810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1891
AccB1I	GGYRCC	1 cut(s)	953
AccBSI	CCGCTC	1 cut(s)	75
AccI	GTMKAC	1 cut(s)	569
AccII	CGCG	1 cut(s)	539
AclWI	GGATC	3 cut(s)	730, 1037, 1050
AcoI	YGGCCR	2 cut(s)	626, 630
AcsI	RAATTY	3 cut(s)	598, 1091, 1807
AcuI	CTGAAG	4 cut(s)	848, 915, 1482, 1674
AcvI	CACGTG	1 cut(s)	1976
AcyI	GRCGYC	1 cut(s)	562
AfaI	GTAC	3 cut(s)	1273, 1672, 1950
AflIII	ACRYGT	5 cut(s)	183, 1473, 1945, 1973, 1975
AgeI	ACCGGT	1 cut(s)	621
AgsI	TTSAA	7 cut(s)	1100, 1268, 1279, 1308, 1561, 1715, 1862
AhdI	GACNNNNNGTC	2 cut(s)	43, 1514
AjnI	CCWGG	3 cut(s)	632, 674, 1045
Alw21I	GWGCWC	1 cut(s)	1506
Alw26I	GTCTC	8 cut(s)	175, 192, 235, 421, 553, 1007, 1149, 1447
AlwI	GGATC	3 cut(s)	730, 1037, 1050
Ama87I	CYCGRG	2 cut(s)	383, 390
ApeKI	GCWGC	5 cut(s)	11, 26, 422, 748, 1742
ApoI	RAATTY	3 cut(s)	598, 1091, 1807
ArsI	GACNNNNNNTTYG	4 cut(s)	122, 154, 170, 202
AsiGI	ACCGGT	1 cut(s)	621
AspS9I	GGNCC	7 cut(s)	67, 81, 279, 340, 366, 1175, 1295
AsuC2I	CCSGG	2 cut(s)	1150, 1197
AsuHPI	GGTGA	4 cut(s)	406, 488, 1136, 1218
AsuII	TTCGAA	1 cut(s)	296
AvaI	CYCGRG	2 cut(s)	383, 390
AvaII	GGWCC	5 cut(s)	279, 340, 366, 1175, 1295
BaeI	ACNNNNGTAYC	2 cut(s)	1749, 1782
BamHI	GGATCC	1 cut(s)	1042
BanI	GGYRCC	1 cut(s)	953
BanII	GRGCYC	2 cut(s)	331, 1506
BbrPI	CACGTG	1 cut(s)	1976
BbsI	GAAGAC	3 cut(s)	237, 1604, 1673
Bbv12I	GWGCWC	1 cut(s)	1506
BbvI	GCAGC	4 cut(s)	38, 409, 760, 1754
BccI	CCATC	7 cut(s)	93, 106, 268, 616, 782, 1237, 1339
BceAI	ACGGC	3 cut(s)	28, 95, 865
BcgI	CGANNNNNNTGC	2 cut(s)	401, 435
BciT130I	CCWGG	3 cut(s)	634, 676, 1047
BciVI	GTATCC	1 cut(s)	1777
BclI	TGATCA	1 cut(s)	613
BcnI	CCSGG	2 cut(s)	1150, 1197
BcoDI	GTCTC	8 cut(s)	175, 192, 235, 421, 553, 1007, 1149, 1447
BfaI	CTAG	8 cut(s)	525, 639, 837, 1077, 1170, 1182, 1632, 1643
BfmI	CTRYAG	2 cut(s)	688, 746
BfuAI	ACCTGC	1 cut(s)	1891
BfuI	GTATCC	1 cut(s)	1777
BisI	GCNGC	8 cut(s)	12, 27, 163, 347, 423, 537, 749, 1743
BlpI	GCTNAGC	1 cut(s)	819
BlsI	GCNGC	8 cut(s)	13, 28, 164, 348, 424, 538, 750, 1744
BmcAI	AGTACT	1 cut(s)	1672
Bme1390I	CCNGG	5 cut(s)	634, 676, 1047, 1150, 1197
Bme18I	GGWCC	5 cut(s)	279, 340, 366, 1175, 1295
BmeRI	GACNNNNNGTC	2 cut(s)	43, 1514
BmeT110I	CYCGRG	2 cut(s)	383, 390
BmgT120I	GGNCC	7 cut(s)	67, 81, 279, 340, 366, 1175, 1295
BmiI	GGNNCC	5 cut(s)	83, 409, 955, 1044, 1176
BmrFI	CCNGG	5 cut(s)	634, 676, 1047, 1150, 1197
BmsI	GCATC	7 cut(s)	245, 823, 841, 934, 1357, 1423, 1743
BoxI	GACNNNNGTC	1 cut(s)	565
BpiI	GAAGAC	3 cut(s)	237, 1604, 1673
BpmI	CTGGAG	1 cut(s)	498
Bpu10I	CCTNAGC	1 cut(s)	1379
Bpu1102I	GCTNAGC	1 cut(s)	819
Bpu14I	TTCGAA	1 cut(s)	296
BpuEI	CTTGAG	2 cut(s)	259, 1939
BpuMI	CCSGG	2 cut(s)	1150, 1197
BsaAI	YACGTR	1 cut(s)	1976
BsaBI	GATNNNNATC	1 cut(s)	259
BsaHI	GRCGYC	1 cut(s)	562
BsaI	GGTCTC	1 cut(s)	235
BsaJI	CCNNGG	5 cut(s)	362, 384, 472, 979, 1148
BsaWI	WCCGGW	1 cut(s)	621
BsaXI	ACNNNNNCTCC	4 cut(s)	496, 526, 1246, 1276
Bse118I	RCCGGY	6 cut(s)	342, 404, 564, 621, 628, 1023
Bse1I	ACTGG	2 cut(s)	1668, 1685
Bse3DI	GCAATG	4 cut(s)	406, 984, 1412, 1707
Bse8I	GATNNNNATC	1 cut(s)	259
BseBI	CCWGG	3 cut(s)	634, 676, 1047
BseDI	CCNNGG	5 cut(s)	362, 384, 472, 979, 1148
BseGI	GGATG	2 cut(s)	838, 949
BseJI	GATNNNNATC	1 cut(s)	259
BseMI	GCAATG	4 cut(s)	406, 984, 1412, 1707
BseMII	CTCAG	8 cut(s)	332, 546, 585, 724, 810, 1327, 1393, 1591
BseNI	ACTGG	2 cut(s)	1668, 1685
BseRI	GAGGAG	3 cut(s)	99, 351, 597
BseXI	GCAGC	4 cut(s)	38, 409, 760, 1754
BsgI	GTGCAG	2 cut(s)	959, 1469
Bsh1236I	CGCG	1 cut(s)	539
Bsh1285I	CGRYCG	2 cut(s)	36, 569
BshNI	GGYRCC	1 cut(s)	953
BshTI	ACCGGT	1 cut(s)	621
BsiEI	CGRYCG	2 cut(s)	36, 569
BsiHKAI	GWGCWC	1 cut(s)	1506
BsiHKCI	CYCGRG	2 cut(s)	383, 390
BsiSI	CCGG	9 cut(s)	314, 343, 405, 565, 622, 629, 1024, 1150, 1196
BslFI	GGGAC	4 cut(s)	544, 673, 1115, 1188
BsmAI	GTCTC	8 cut(s)	175, 192, 235, 421, 553, 1007, 1149, 1447
BsmBI	CGTCTC	3 cut(s)	553, 1149, 1447
BsmFI	GGGAC	4 cut(s)	544, 673, 1115, 1188
BsmI	GAATGC	2 cut(s)	820, 1486
Bso31I	GGTCTC	1 cut(s)	235
BsoBI	CYCGRG	2 cut(s)	383, 390
Bsp119I	TTCGAA	1 cut(s)	296
Bsp1286I	GDGCHC	2 cut(s)	331, 1506
Bsp143I	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
Bsp1720I	GCTNAGC	1 cut(s)	819
BspCNI	CTCAG	8 cut(s)	331, 547, 586, 723, 811, 1326, 1392, 1590
BspFNI	CGCG	1 cut(s)	539
BspLI	GGNNCC	5 cut(s)	83, 409, 955, 1044, 1176
BspMAI	CTGCAG	2 cut(s)	692, 750
BspMI	ACCTGC	1 cut(s)	1891
BspPI	GGATC	3 cut(s)	730, 1037, 1050
BspQI	GCTCTTC	1 cut(s)	769
BspT104I	TTCGAA	1 cut(s)	296
BspT107I	GGYRCC	1 cut(s)	953
BspTNI	GGTCTC	1 cut(s)	235
BsrBI	CCGCTC	1 cut(s)	75
BsrDI	GCAATG	4 cut(s)	406, 984, 1412, 1707
BsrFI	RCCGGY	6 cut(s)	342, 404, 564, 621, 628, 1023
BsrI	ACTGG	2 cut(s)	1668, 1685
BssAI	RCCGGY	6 cut(s)	342, 404, 564, 621, 628, 1023
BssECI	CCNNGG	5 cut(s)	362, 384, 472, 979, 1148
BssMI	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
BssNI	GRCGYC	1 cut(s)	562
BssT1I	CCWWGG	1 cut(s)	472
Bst2UI	CCWGG	3 cut(s)	634, 676, 1047
Bst4CI	ACNGT	3 cut(s)	229, 911, 1397
Bst6I	CTCTTC	1 cut(s)	769
BstACI	GRCGYC	1 cut(s)	562
BstAPI	GCANNNNNTGC	1 cut(s)	687
BstBAI	YACGTR	1 cut(s)	1976
BstBI	TTCGAA	1 cut(s)	296
BstC8I	GCNNGC	4 cut(s)	376, 630, 1188, 1665
BstDSI	CCRYGG	1 cut(s)	979
BstENI	CCTNNNNNAGG	3 cut(s)	383, 579, 1279
BstF5I	GGATG	2 cut(s)	838, 949
BstFNI	CGCG	1 cut(s)	539
BstKTI	GATC	8 cut(s)	589, 616, 725, 889, 1045, 1430, 1533, 1627
BstMAI	GTCTC	8 cut(s)	175, 192, 235, 421, 553, 1007, 1149, 1447
BstMBI	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
BstMCI	CGRYCG	2 cut(s)	36, 569
BstNI	CCWGG	3 cut(s)	634, 676, 1047
BstNSI	RCATGY	3 cut(s)	187, 1378, 1477
BstPAI	GACNNNNGTC	1 cut(s)	565
BstSCI	CCNGG	5 cut(s)	632, 674, 1045, 1148, 1195
BstSFI	CTRYAG	2 cut(s)	688, 746
BstUI	CGCG	1 cut(s)	539
BstV1I	GCAGC	4 cut(s)	38, 409, 760, 1754
BstV2I	GAAGAC	3 cut(s)	237, 1604, 1673
BstX2I	RGATCY	2 cut(s)	722, 1042
BstXI	CCANNNNNNTGG	2 cut(s)	289, 682
BstYI	RGATCY	2 cut(s)	722, 1042
BsuI	GTATCC	1 cut(s)	1777
BtgI	CCRYGG	1 cut(s)	979
BtsCI	GGATG	2 cut(s)	838, 949
BtsI	GCAGTG	3 cut(s)	743, 891, 996
BtsIMutI	CAGTG	5 cut(s)	718, 743, 891, 916, 996
BveI	ACCTGC	1 cut(s)	1891
Cac8I	GCNNGC	4 cut(s)	376, 630, 1188, 1665
Cfr10I	RCCGGY	6 cut(s)	342, 404, 564, 621, 628, 1023
Cfr13I	GGNCC	7 cut(s)	67, 81, 279, 340, 366, 1175, 1295
CpoI	CGGWCCG	1 cut(s)	340
CseI	GACGC	3 cut(s)	231, 570, 768
Csp6I	GTAC	3 cut(s)	1272, 1671, 1949
CspAI	ACCGGT	1 cut(s)	621
CspI	CGGWCCG	1 cut(s)	340
CviAII	CATG	9 cut(s)	184, 682, 757, 866, 1375, 1444, 1474, 1485, 1897
CviQI	GTAC	3 cut(s)	1272, 1671, 1949
DpnI	GATC	8 cut(s)	588, 615, 724, 888, 1044, 1429, 1532, 1626
DpnII	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
DriI	GACNNNNNGTC	2 cut(s)	43, 1514
EaeI	YGGCCR	2 cut(s)	626, 630
Eam1104I	CTCTTC	1 cut(s)	769
Eam1105I	GACNNNNNGTC	2 cut(s)	43, 1514
EarI	CTCTTC	1 cut(s)	769
EciI	GGCGGA	2 cut(s)	353, 1882
Ecl136II	GAGCTC	1 cut(s)	1504
Eco130I	CCWWGG	1 cut(s)	472
Eco147I	AGGCCT	3 cut(s)	106, 482, 1186
Eco24I	GRGCYC	2 cut(s)	331, 1506
Eco31I	GGTCTC	1 cut(s)	235
Eco47I	GGWCC	5 cut(s)	279, 340, 366, 1175, 1295
Eco53kI	GAGCTC	1 cut(s)	1504
Eco57I	CTGAAG	4 cut(s)	848, 915, 1482, 1674
Eco72I	CACGTG	1 cut(s)	1976
Eco88I	CYCGRG	2 cut(s)	383, 390
EcoICRI	GAGCTC	1 cut(s)	1504
EcoNI	CCTNNNNNAGG	3 cut(s)	383, 579, 1279
EcoRI	GAATTC	2 cut(s)	598, 1807
EcoRII	CCWGG	3 cut(s)	632, 674, 1045
EcoT14I	CCWWGG	1 cut(s)	472
EcoT22I	ATGCAT	1 cut(s)	1486
EcoT38I	GRGCYC	2 cut(s)	331, 1506
ErhI	CCWWGG	1 cut(s)	472
Esp3I	CGTCTC	3 cut(s)	553, 1149, 1447
FaeI	CATG	9 cut(s)	187, 685, 760, 869, 1378, 1447, 1477, 1488, 1900
FalI	AAGNNNNNCTT	4 cut(s)	766, 798, 1526, 1558
FaqI	GGGAC	4 cut(s)	544, 673, 1115, 1188
FatI	CATG	9 cut(s)	183, 681, 756, 865, 1374, 1443, 1473, 1484, 1896
FauI	CCCGC	1 cut(s)	48
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	1 cut(s)	569
Fnu4HI	GCNGC	8 cut(s)	12, 27, 163, 347, 423, 537, 749, 1743
FokI	GGATG	2 cut(s)	845, 956
FriOI	GRGCYC	2 cut(s)	331, 1506
FseI	GGCCGGCC	1 cut(s)	632
Fsp4HI	GCNGC	8 cut(s)	12, 27, 163, 347, 423, 537, 749, 1743
FspBI	CTAG	8 cut(s)	525, 639, 837, 1077, 1170, 1182, 1632, 1643
GluI	GCNGC	8 cut(s)	12, 27, 163, 347, 423, 537, 749, 1743
GsuI	CTGGAG	1 cut(s)	498
HapII	CCGG	9 cut(s)	314, 343, 405, 565, 622, 629, 1024, 1150, 1196
HgaI	GACGC	3 cut(s)	231, 570, 768
Hin1I	GRCGYC	1 cut(s)	562
Hin1II	CATG	9 cut(s)	187, 685, 760, 869, 1378, 1447, 1477, 1488, 1900
HincII	GTYRAC	4 cut(s)	570, 1327, 1566, 1708
HindII	GTYRAC	4 cut(s)	570, 1327, 1566, 1708
HindIII	AAGCTT	2 cut(s)	1202, 1656
HinfI	GANTC	2 cut(s)	511, 869
HpaI	GTTAAC	1 cut(s)	1566
HpaII	CCGG	9 cut(s)	314, 343, 405, 565, 622, 629, 1024, 1150, 1196
HphI	GGTGA	4 cut(s)	406, 488, 1136, 1218
Hpy166II	GTNNAC	7 cut(s)	570, 1327, 1566, 1708, 1823, 1884, 1949
Hpy188III	TCNNGA	3 cut(s)	249, 1077, 1616
Hpy8I	GTNNAC	7 cut(s)	570, 1327, 1566, 1708, 1823, 1884, 1949
Hpy99I	CGWCG	1 cut(s)	178
HpyAV	CCTTC	9 cut(s)	129, 201, 207, 538, 823, 1257, 1314, 1450, 1825
HpyCH4III	ACNGT	3 cut(s)	229, 911, 1397
HpyCH4IV	ACGT	2 cut(s)	1945, 1975
HpySE526I	ACGT	2 cut(s)	1945, 1975
Hsp92I	GRCGYC	1 cut(s)	562
Hsp92II	CATG	9 cut(s)	187, 685, 760, 869, 1378, 1447, 1477, 1488, 1900
KroI	GCCGGC	1 cut(s)	628
KroNI	GCCGGC	1 cut(s)	630
Ksp22I	TGATCA	1 cut(s)	613
KspAI	GTTAAC	1 cut(s)	1566
Kzo9I	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
LguI	GCTCTTC	1 cut(s)	769
LmnI	GCTCC	5 cut(s)	34, 453, 678, 1509, 1646
Lsp1109I	GCAGC	4 cut(s)	38, 409, 760, 1754
LweI	GCATC	7 cut(s)	245, 823, 841, 934, 1357, 1423, 1743
MaeI	CTAG	8 cut(s)	525, 639, 837, 1077, 1170, 1182, 1632, 1643
MaeII	ACGT	2 cut(s)	1945, 1975
MaeIII	GTNAC	6 cut(s)	439, 1224, 1489, 1516, 1536, 1834
MalI	GATC	8 cut(s)	588, 615, 724, 888, 1044, 1429, 1532, 1626
MbiI	CCGCTC	1 cut(s)	75
MboI	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
MfeI	CAATTG	2 cut(s)	644, 1937
MflI	RGATCY	2 cut(s)	722, 1042
MhlI	GDGCHC	2 cut(s)	331, 1506
MluCI	AATT	8 cut(s)	598, 644, 856, 1091, 1556, 1587, 1807, 1937
MlyI	GAGTC	1 cut(s)	505
MmeI	TCCRAC	2 cut(s)	56, 1531
Mph1103I	ATGCAT	1 cut(s)	1486
MroNI	GCCGGC	1 cut(s)	628
MseI	TTAA	2 cut(s)	1119, 1565
MslI	CAYNNNNRTG	1 cut(s)	989
MspA1I	CMGCKG	2 cut(s)	374, 1745
MspI	CCGG	9 cut(s)	314, 343, 405, 565, 622, 629, 1024, 1150, 1196
MspR9I	CCNGG	5 cut(s)	634, 676, 1047, 1150, 1197
MunI	CAATTG	2 cut(s)	644, 1937
Mva1269I	GAATGC	2 cut(s)	820, 1486
MvaI	CCWGG	3 cut(s)	634, 676, 1047
MvnI	CGCG	1 cut(s)	539
NaeI	GCCGGC	1 cut(s)	630
NciI	CCSGG	2 cut(s)	1150, 1197
NdeII	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
NgoMIV	GCCGGC	1 cut(s)	628
NlaIII	CATG	9 cut(s)	187, 685, 760, 869, 1378, 1447, 1477, 1488, 1900
NlaIV	GGNNCC	5 cut(s)	83, 409, 955, 1044, 1176
NmeAIII	GCCGAG	2 cut(s)	409, 1489
NmuCI	GTSAC	3 cut(s)	439, 1224, 1516
NsiI	ATGCAT	1 cut(s)	1486
NspI	RCATGY	3 cut(s)	187, 1378, 1477
NspV	TTCGAA	1 cut(s)	296
PceI	AGGCCT	3 cut(s)	106, 482, 1186
PciI	ACATGT	2 cut(s)	183, 1473
PciSI	GCTCTTC	1 cut(s)	769
PcsI	WCGNNNNNNNCGW	1 cut(s)	239
PctI	GAATGC	2 cut(s)	820, 1486
PdiI	GCCGGC	1 cut(s)	630
PfeI	GAWTC	1 cut(s)	869
PfoI	TCCNGGA	1 cut(s)	674
PinAI	ACCGGT	1 cut(s)	621
PkrI	GCNGC	8 cut(s)	13, 28, 164, 348, 424, 538, 750, 1744
PleI	GAGTC	1 cut(s)	505
PmaCI	CACGTG	1 cut(s)	1976
PmlI	CACGTG	1 cut(s)	1976
PpsI	GAGTC	1 cut(s)	505
Ppu21I	YACGTR	1 cut(s)	1976
PscI	ACATGT	2 cut(s)	183, 1473
PshAI	GACNNNNGTC	1 cut(s)	565
Psp124BI	GAGCTC	1 cut(s)	1506
Psp6I	CCWGG	3 cut(s)	632, 674, 1045
PspCI	CACGTG	1 cut(s)	1976
PspGI	CCWGG	3 cut(s)	632, 674, 1045
PspN4I	GGNNCC	5 cut(s)	83, 409, 955, 1044, 1176
PspPI	GGNCC	7 cut(s)	67, 81, 279, 340, 366, 1175, 1295
PstI	CTGCAG	2 cut(s)	692, 750
PsuI	RGATCY	2 cut(s)	722, 1042
PvuII	CAGCTG	1 cut(s)	1745
RigI	GGCCGGCC	1 cut(s)	632
RsaI	GTAC	3 cut(s)	1273, 1672, 1950
RsaNI	GTAC	3 cut(s)	1272, 1671, 1949
RseI	CAYNNNNRTG	1 cut(s)	989
Rsr2I	CGGWCCG	1 cut(s)	340
RsrII	CGGWCCG	1 cut(s)	340
SacI	GAGCTC	1 cut(s)	1506
SalI	GTCGAC	1 cut(s)	568
SapI	GCTCTTC	1 cut(s)	769
SaqAI	TTAA	2 cut(s)	1119, 1565
SatI	GCNGC	8 cut(s)	12, 27, 163, 347, 423, 537, 749, 1743
Sau3AI	GATC	8 cut(s)	586, 613, 722, 886, 1042, 1427, 1530, 1624
Sau96I	GGNCC	7 cut(s)	67, 81, 279, 340, 366, 1175, 1295
ScaI	AGTACT	1 cut(s)	1672
SchI	GAGTC	1 cut(s)	505
ScrFI	CCNGG	5 cut(s)	634, 676, 1047, 1150, 1197
SduI	GDGCHC	2 cut(s)	331, 1506
SfaNI	GCATC	7 cut(s)	245, 823, 841, 934, 1357, 1423, 1743
SfcI	CTRYAG	2 cut(s)	688, 746
SfuI	TTCGAA	1 cut(s)	296
SgrAI	CRCCGGYG	1 cut(s)	621
SinI	GGWCC	5 cut(s)	279, 340, 366, 1175, 1295
SmiMI	CAYNNNNRTG	1 cut(s)	989
SmlI	CTYRAG	2 cut(s)	274, 1918
SmoI	CTYRAG	2 cut(s)	274, 1918
Sse9I	AATT	8 cut(s)	598, 644, 856, 1091, 1556, 1587, 1807, 1937
SseBI	AGGCCT	3 cut(s)	106, 482, 1186
SspMI	CTAG	8 cut(s)	525, 639, 837, 1077, 1170, 1182, 1632, 1643
SstI	GAGCTC	1 cut(s)	1506
StuI	AGGCCT	3 cut(s)	106, 482, 1186
StyD4I	CCNGG	5 cut(s)	632, 674, 1045, 1148, 1195
StyI	CCWWGG	1 cut(s)	472
TaaI	ACNGT	3 cut(s)	229, 911, 1397
TaiI	ACGT	2 cut(s)	1948, 1978
TaqII	GACCGA	1 cut(s)	50
TasI	AATT	8 cut(s)	598, 644, 856, 1091, 1556, 1587, 1807, 1937
TatI	WGTACW	1 cut(s)	1670
TauI	GCSGC	3 cut(s)	165, 349, 539
TfiI	GAWTC	1 cut(s)	869
Tru1I	TTAA	2 cut(s)	1119, 1565
Tru9I	TTAA	2 cut(s)	1119, 1565
TscAI	CASTG	5 cut(s)	718, 750, 898, 916, 996
TseFI	GTSAC	3 cut(s)	439, 1224, 1516
TseI	GCWGC	5 cut(s)	11, 26, 422, 748, 1742
Tsp45I	GTSAC	3 cut(s)	439, 1224, 1516
TspDTI	ATGAA	6 cut(s)	882, 1206, 1432, 1776, 1820, 1844
TspGWI	ACGGA	3 cut(s)	255, 865, 1667
TspRI	CASTG	5 cut(s)	718, 750, 898, 916, 996
VpaK11BI	GGWCC	5 cut(s)	279, 340, 366, 1175, 1295
XagI	CCTNNNNNAGG	3 cut(s)	383, 579, 1279
XapI	RAATTY	3 cut(s)	598, 1091, 1807
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	3 cut(s)	187, 1378, 1477
XmiI	GTMKAC	1 cut(s)	569
XspI	CTAG	8 cut(s)	525, 639, 837, 1077, 1170, 1182, 1632, 1643
ZrmI	AGTACT	1 cut(s)	1672
Zsp2I	ATGCAT	1 cut(s)	1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.