Transcription factor bHLH3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16430 |
| fragaria_vesca | FvH4_2g22150 FvH4_2g22150 |
| malus_domestica | MD05G1202500.v1.1 MD05G1202900.v1.1 MD10G1190000.v1.1 |
| prunus_persica | Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 |
| pyrus_communis | pycom05g18900 pycom05g18950 pycom10g16360 pycom10g16370 |
| rosa_chinensis | RchiOBHm_Chr6g0288981 |
| rosa_laevigata | RLG00000012333 RLG00000013932 |
| rosa_multiflora | Rmu_sc0000666.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00179620 |
| rosa_rugosa | Rorug06G0199900 |
| rosa_samantha | Rh6AG311600 Rh6BG318100 Rh6CG325000 Rh6DG310800 |
| rosa_wichuraiana | Rw6G013790 Rw6G026880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 533 |
| AccB1I | GGYRCC | 1 cut(s) | 59 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 198, 931 |
| AccBSI | CCGCTC | 1 cut(s) | 1084 |
| AccII | CGCG | 2 cut(s) | 290, 1095 |
| AciI | CCGC | 3 cut(s) | 125, 392, 1084 |
| AclI | AACGTT | 1 cut(s) | 795 |
| AclWI | GGATC | 3 cut(s) | 235, 257, 270 |
| AcsI | RAATTY | 2 cut(s) | 11, 292 |
| AcuI | CTGAAG | 1 cut(s) | 822 |
| AdeI | CACNNNGTG | 1 cut(s) | 491 |
| AfaI | GTAC | 4 cut(s) | 54, 618, 868, 1386 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 198, 240, 272, 931, 957, 958, 1046 |
| AflII | CTTAAG | 1 cut(s) | 980 |
| AjiI | CACGTC | 1 cut(s) | 755 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 511, 543, 688, 720, 1313, 1345 |
| AluBI | AGCT | 8 cut(s) | 163, 281, 349, 364, 976, 1102, 1130, 1486 |
| AluI | AGCT | 8 cut(s) | 163, 281, 349, 364, 976, 1102, 1130, 1486 |
| Alw26I | GTCTC | 1 cut(s) | 770 |
| AlwI | GGATC | 3 cut(s) | 235, 257, 270 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 154 |
| Ama87I | CYCGRG | 1 cut(s) | 767 |
| AoxI | GGCC | 2 cut(s) | 122, 1491 |
| ApeKI | GCWGC | 2 cut(s) | 145, 976 |
| ApoI | RAATTY | 2 cut(s) | 11, 292 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1039 |
| AspLEI | GCGC | 1 cut(s) | 1095 |
| AspS9I | GGNCC | 2 cut(s) | 494, 773 |
| AsuC2I | CCSGG | 2 cut(s) | 129, 1343 |
| AsuHPI | GGTGA | 9 cut(s) | 17, 31, 257, 352, 908, 1186, 1187, 1331, 1472 |
| AsuII | TTCGAA | 1 cut(s) | 883 |
| AvaI | CYCGRG | 1 cut(s) | 767 |
| AvaII | GGWCC | 2 cut(s) | 494, 773 |
| BamHI | GGATCC | 1 cut(s) | 262 |
| BanI | GGYRCC | 1 cut(s) | 59 |
| BbsI | GAAGAC | 1 cut(s) | 36 |
| BbvI | GCAGC | 2 cut(s) | 157, 963 |
| BccI | CCATC | 7 cut(s) | 242, 266, 410, 925, 932, 1147, 1234 |
| BcnI | CCSGG | 2 cut(s) | 129, 1343 |
| BcoDI | GTCTC | 1 cut(s) | 770 |
| BfaI | CTAG | 3 cut(s) | 56, 297, 714 |
| BfmI | CTRYAG | 1 cut(s) | 498 |
| BfrI | CTTAAG | 1 cut(s) | 980 |
| BfuAI | ACCTGC | 1 cut(s) | 533 |
| BisI | GCNGC | 4 cut(s) | 125, 146, 977, 1085 |
| BlsI | GCNGC | 4 cut(s) | 126, 147, 978, 1086 |
| BmcAI | AGTACT | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 2 cut(s) | 129, 1343 |
| Bme18I | GGWCC | 2 cut(s) | 494, 773 |
| BmeT110I | CYCGRG | 1 cut(s) | 767 |
| BmgBI | CACGTC | 1 cut(s) | 755 |
| BmgT120I | GGNCC | 2 cut(s) | 494, 773 |
| BmiI | GGNNCC | 4 cut(s) | 61, 264, 774, 1272 |
| BmrFI | CCNGG | 2 cut(s) | 129, 1343 |
| BmsI | GCATC | 4 cut(s) | 529, 1168, 1294, 1453 |
| BpiI | GAAGAC | 1 cut(s) | 36 |
| BpmI | CTGGAG | 2 cut(s) | 499, 1187 |
| Bpu14I | TTCGAA | 1 cut(s) | 883 |
| BpuEI | CTTGAG | 3 cut(s) | 256, 1374, 1437 |
| BpuMI | CCSGG | 2 cut(s) | 129, 1343 |
| BsaJI | CCNNGG | 2 cut(s) | 267, 1297 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 198, 240, 272, 931, 957, 958, 1046 |
| Bse118I | RCCGGY | 2 cut(s) | 72, 1267 |
| Bse1I | ACTGG | 2 cut(s) | 93, 565 |
| Bse3DI | GCAATG | 1 cut(s) | 253 |
| BseDI | CCNNGG | 2 cut(s) | 267, 1297 |
| BseGI | GGATG | 7 cut(s) | 277, 421, 991, 1012, 1309, 1323, 1356 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 198, 240, 272, 931, 957, 958, 1046 |
| BseMI | GCAATG | 1 cut(s) | 253 |
| BseMII | CTCAG | 1 cut(s) | 1458 |
| BseNI | ACTGG | 2 cut(s) | 93, 565 |
| BseXI | GCAGC | 2 cut(s) | 157, 963 |
| BseYI | CCCAGC | 2 cut(s) | 281, 593 |
| BsgI | GTGCAG | 2 cut(s) | 164, 344 |
| Bsh1236I | CGCG | 2 cut(s) | 290, 1095 |
| BshFI | GGCC | 2 cut(s) | 124, 1493 |
| BshNI | GGYRCC | 1 cut(s) | 59 |
| BsiHKCI | CYCGRG | 1 cut(s) | 767 |
| BsiSI | CCGG | 4 cut(s) | 73, 128, 1268, 1343 |
| BslFI | GGGAC | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 198, 240, 272, 931, 957, 958, 1046 |
| BsmAI | GTCTC | 1 cut(s) | 770 |
| BsmFI | GGGAC | 1 cut(s) | 299 |
| BsmI | GAATGC | 1 cut(s) | 394 |
| BsnI | GGCC | 2 cut(s) | 124, 1493 |
| BsoBI | CYCGRG | 1 cut(s) | 767 |
| Bsp119I | TTCGAA | 1 cut(s) | 883 |
| Bsp143I | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| BspACI | CCGC | 3 cut(s) | 125, 392, 1084 |
| BspANI | GGCC | 2 cut(s) | 124, 1493 |
| BspCNI | CTCAG | 1 cut(s) | 1459 |
| BspFNI | CGCG | 2 cut(s) | 290, 1095 |
| BspLI | GGNNCC | 4 cut(s) | 61, 264, 774, 1272 |
| BspMAI | CTGCAG | 1 cut(s) | 502 |
| BspMI | ACCTGC | 1 cut(s) | 533 |
| BspPI | GGATC | 3 cut(s) | 235, 257, 270 |
| BspT104I | TTCGAA | 1 cut(s) | 883 |
| BspT107I | GGYRCC | 1 cut(s) | 59 |
| BspTI | CTTAAG | 1 cut(s) | 980 |
| BsrBI | CCGCTC | 1 cut(s) | 1084 |
| BsrDI | GCAATG | 1 cut(s) | 253 |
| BsrFI | RCCGGY | 2 cut(s) | 72, 1267 |
| BsrI | ACTGG | 2 cut(s) | 93, 565 |
| BssAI | RCCGGY | 2 cut(s) | 72, 1267 |
| BssECI | CCNNGG | 2 cut(s) | 267, 1297 |
| BssMI | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| BssT1I | CCWWGG | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 3 cut(s) | 491, 607, 909 |
| Bst6I | CTCTTC | 2 cut(s) | 330, 1173 |
| BstAFI | CTTAAG | 1 cut(s) | 980 |
| BstBI | TTCGAA | 1 cut(s) | 883 |
| BstC8I | GCNNGC | 3 cut(s) | 70, 161, 204 |
| BstDEI | CTNAG | 4 cut(s) | 761, 1124, 1367, 1467 |
| BstDSI | CCRYGG | 1 cut(s) | 1297 |
| BstF5I | GGATG | 7 cut(s) | 277, 421, 991, 1012, 1309, 1323, 1356 |
| BstFNI | CGCG | 2 cut(s) | 290, 1095 |
| BstHHI | GCGC | 1 cut(s) | 1095 |
| BstKTI | GATC | 6 cut(s) | 84, 230, 265, 575, 1201, 1215 |
| BstMAI | GTCTC | 1 cut(s) | 770 |
| BstMBI | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 151, 160, 287, 590, 1090, 1099, 1127 |
| BstNSI | RCATGY | 1 cut(s) | 375 |
| BstSCI | CCNGG | 2 cut(s) | 127, 1341 |
| BstSFI | CTRYAG | 1 cut(s) | 498 |
| BstUI | CGCG | 2 cut(s) | 290, 1095 |
| BstV1I | GCAGC | 2 cut(s) | 157, 963 |
| BstV2I | GAAGAC | 1 cut(s) | 36 |
| BstX2I | RGATCY | 2 cut(s) | 227, 262 |
| BstYI | RGATCY | 2 cut(s) | 227, 262 |
| BsuRI | GGCC | 2 cut(s) | 124, 1493 |
| BtgI | CCRYGG | 1 cut(s) | 1297 |
| BtrI | CACGTC | 1 cut(s) | 755 |
| BtsCI | GGATG | 7 cut(s) | 277, 421, 991, 1012, 1309, 1323, 1356 |
| BtsI | GCAGTG | 1 cut(s) | 327 |
| BtsIMutI | CAGTG | 4 cut(s) | 86, 327, 487, 867 |
| BveI | ACCTGC | 1 cut(s) | 533 |
| Cac8I | GCNNGC | 3 cut(s) | 70, 161, 204 |
| CaiI | CAGNNNCTG | 1 cut(s) | 154 |
| CfoI | GCGC | 1 cut(s) | 1095 |
| Cfr10I | RCCGGY | 2 cut(s) | 72, 1267 |
| Cfr13I | GGNCC | 2 cut(s) | 494, 773 |
| CseI | GACGC | 1 cut(s) | 296 |
| Csp6I | GTAC | 4 cut(s) | 53, 617, 867, 1385 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 256, 291 |
| CviAII | CATG | 4 cut(s) | 40, 368, 372, 1070 |
| CviQI | GTAC | 4 cut(s) | 53, 617, 867, 1385 |
| DdeI | CTNAG | 4 cut(s) | 761, 1124, 1367, 1467 |
| DpnI | GATC | 6 cut(s) | 83, 229, 264, 574, 1200, 1214 |
| DpnII | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| DraIII | CACNNNGTG | 1 cut(s) | 491 |
| Eam1104I | CTCTTC | 2 cut(s) | 330, 1173 |
| EarI | CTCTTC | 2 cut(s) | 330, 1173 |
| Eco130I | CCWWGG | 1 cut(s) | 267 |
| Eco47I | GGWCC | 2 cut(s) | 494, 773 |
| Eco57I | CTGAAG | 1 cut(s) | 822 |
| Eco88I | CYCGRG | 1 cut(s) | 767 |
| EcoRI | GAATTC | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 1 cut(s) | 267 |
| EcoT22I | ATGCAT | 2 cut(s) | 373, 466 |
| ErhI | CCWWGG | 1 cut(s) | 267 |
| FaeI | CATG | 4 cut(s) | 43, 371, 375, 1073 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1152, 1184 |
| FaqI | GGGAC | 1 cut(s) | 299 |
| FatI | CATG | 4 cut(s) | 39, 367, 371, 1069 |
| Fnu4HI | GCNGC | 4 cut(s) | 125, 146, 977, 1085 |
| FokI | GGATG | 7 cut(s) | 284, 428, 998, 1019, 1316, 1330, 1343 |
| Fsp4HI | GCNGC | 4 cut(s) | 125, 146, 977, 1085 |
| FspBI | CTAG | 3 cut(s) | 56, 297, 714 |
| GlaI | GCGC | 1 cut(s) | 1094 |
| GluI | GCNGC | 4 cut(s) | 125, 146, 977, 1085 |
| GsaI | CCCAGC | 2 cut(s) | 285, 597 |
| GsuI | CTGGAG | 2 cut(s) | 499, 1187 |
| HaeIII | GGCC | 2 cut(s) | 124, 1493 |
| HapII | CCGG | 4 cut(s) | 73, 128, 1268, 1343 |
| HgaI | GACGC | 1 cut(s) | 296 |
| HhaI | GCGC | 1 cut(s) | 1095 |
| Hin1II | CATG | 4 cut(s) | 43, 371, 375, 1073 |
| Hin6I | GCGC | 1 cut(s) | 1093 |
| HinP1I | GCGC | 1 cut(s) | 1093 |
| HincII | GTYRAC | 3 cut(s) | 169, 793, 1246 |
| HindII | GTYRAC | 3 cut(s) | 169, 793, 1246 |
| HindIII | AAGCTT | 1 cut(s) | 1100 |
| HpaI | GTTAAC | 2 cut(s) | 793, 1246 |
| HpaII | CCGG | 4 cut(s) | 73, 128, 1268, 1343 |
| HphI | GGTGA | 9 cut(s) | 17, 31, 257, 352, 908, 1186, 1187, 1331, 1472 |
| Hpy166II | GTNNAC | 5 cut(s) | 169, 554, 758, 793, 1246 |
| Hpy8I | GTNNAC | 5 cut(s) | 169, 554, 758, 793, 1246 |
| HpyAV | CCTTC | 2 cut(s) | 846, 1050 |
| HpyCH4III | ACNGT | 3 cut(s) | 491, 607, 909 |
| HpyCH4IV | ACGT | 2 cut(s) | 754, 795 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 151, 160, 287, 590, 1090, 1099, 1127 |
| HpyF3I | CTNAG | 4 cut(s) | 761, 1124, 1367, 1467 |
| HpySE526I | ACGT | 2 cut(s) | 754, 795 |
| Hsp92II | CATG | 4 cut(s) | 43, 371, 375, 1073 |
| HspAI | GCGC | 1 cut(s) | 1093 |
| KspAI | GTTAAC | 2 cut(s) | 793, 1246 |
| Kzo9I | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| LmnI | GCTCC | 3 cut(s) | 278, 369, 973 |
| Lsp1109I | GCAGC | 2 cut(s) | 157, 963 |
| LweI | GCATC | 4 cut(s) | 529, 1168, 1294, 1453 |
| MaeI | CTAG | 3 cut(s) | 56, 297, 714 |
| MaeII | ACGT | 2 cut(s) | 754, 795 |
| MalI | GATC | 6 cut(s) | 83, 229, 264, 574, 1200, 1214 |
| MbiI | CCGCTC | 1 cut(s) | 1084 |
| MboI | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| MflI | RGATCY | 2 cut(s) | 227, 262 |
| MluCI | AATT | 9 cut(s) | 11, 134, 178, 184, 292, 397, 525, 851, 1380 |
| MlyI | GAGTC | 6 cut(s) | 56, 512, 851, 998, 1227, 1403 |
| MmeI | TCCRAC | 1 cut(s) | 393 |
| Mph1103I | ATGCAT | 2 cut(s) | 373, 466 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1039 |
| MseI | TTAA | 5 cut(s) | 792, 981, 1104, 1245, 1475 |
| MslI | CAYNNNNRTG | 2 cut(s) | 452, 1302 |
| MspCI | CTTAAG | 1 cut(s) | 980 |
| MspI | CCGG | 4 cut(s) | 73, 128, 1268, 1343 |
| MspR9I | CCNGG | 2 cut(s) | 129, 1343 |
| Mva1269I | GAATGC | 1 cut(s) | 394 |
| MvnI | CGCG | 2 cut(s) | 290, 1095 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 151, 160, 287, 590, 1090, 1099, 1127 |
| NciI | CCSGG | 2 cut(s) | 129, 1343 |
| NdeII | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| NlaIII | CATG | 4 cut(s) | 43, 371, 375, 1073 |
| NlaIV | GGNNCC | 4 cut(s) | 61, 264, 774, 1272 |
| NsiI | ATGCAT | 2 cut(s) | 373, 466 |
| NspI | RCATGY | 1 cut(s) | 375 |
| NspV | TTCGAA | 1 cut(s) | 883 |
| PctI | GAATGC | 1 cut(s) | 394 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1039 |
| PfeI | GAWTC | 5 cut(s) | 476, 710, 942, 1066, 1334 |
| PflFI | GACNNNGTC | 1 cut(s) | 35 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 198, 931 |
| PkrI | GCNGC | 4 cut(s) | 126, 147, 978, 1086 |
| PleI | GAGTC | 6 cut(s) | 55, 511, 850, 997, 1226, 1402 |
| PpsI | GAGTC | 6 cut(s) | 55, 511, 850, 997, 1226, 1402 |
| Psp1406I | AACGTT | 1 cut(s) | 795 |
| PspFI | CCCAGC | 2 cut(s) | 281, 593 |
| PspN4I | GGNNCC | 4 cut(s) | 61, 264, 774, 1272 |
| PspPI | GGNCC | 2 cut(s) | 494, 773 |
| PstI | CTGCAG | 1 cut(s) | 502 |
| PstNI | CAGNNNCTG | 1 cut(s) | 154 |
| PsuI | RGATCY | 2 cut(s) | 227, 262 |
| PsyI | GACNNNGTC | 1 cut(s) | 35 |
| RsaI | GTAC | 4 cut(s) | 54, 618, 868, 1386 |
| RsaNI | GTAC | 4 cut(s) | 53, 617, 867, 1385 |
| RseI | CAYNNNNRTG | 2 cut(s) | 452, 1302 |
| SaqAI | TTAA | 5 cut(s) | 792, 981, 1104, 1245, 1475 |
| SatI | GCNGC | 4 cut(s) | 125, 146, 977, 1085 |
| Sau3AI | GATC | 6 cut(s) | 81, 227, 262, 572, 1198, 1212 |
| Sau96I | GGNCC | 2 cut(s) | 494, 773 |
| ScaI | AGTACT | 1 cut(s) | 54 |
| SchI | GAGTC | 6 cut(s) | 56, 512, 851, 998, 1227, 1403 |
| ScrFI | CCNGG | 2 cut(s) | 129, 1343 |
| SfaNI | GCATC | 4 cut(s) | 529, 1168, 1294, 1453 |
| SfcI | CTRYAG | 1 cut(s) | 498 |
| SfuI | TTCGAA | 1 cut(s) | 883 |
| SinI | GGWCC | 2 cut(s) | 494, 773 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 452, 1302 |
| SmlI | CTYRAG | 4 cut(s) | 235, 980, 1389, 1452 |
| SmoI | CTYRAG | 4 cut(s) | 235, 980, 1389, 1452 |
| Sse9I | AATT | 9 cut(s) | 11, 134, 178, 184, 292, 397, 525, 851, 1380 |
| SsiI | CCGC | 3 cut(s) | 125, 392, 1084 |
| SspMI | CTAG | 3 cut(s) | 56, 297, 714 |
| StyD4I | CCNGG | 2 cut(s) | 127, 1341 |
| StyI | CCWWGG | 1 cut(s) | 267 |
| TaaI | ACNGT | 3 cut(s) | 491, 607, 909 |
| TaiI | ACGT | 2 cut(s) | 757, 798 |
| TaqI | TCGA | 7 cut(s) | 176, 215, 479, 569, 883, 995, 1148 |
| TasI | AATT | 9 cut(s) | 11, 134, 178, 184, 292, 397, 525, 851, 1380 |
| TatI | WGTACW | 1 cut(s) | 52 |
| TauI | GCSGC | 2 cut(s) | 127, 1087 |
| TfiI | GAWTC | 5 cut(s) | 476, 710, 942, 1066, 1334 |
| Tru1I | TTAA | 5 cut(s) | 792, 981, 1104, 1245, 1475 |
| Tru9I | TTAA | 5 cut(s) | 792, 981, 1104, 1245, 1475 |
| TscAI | CASTG | 4 cut(s) | 93, 327, 494, 867 |
| TseI | GCWGC | 2 cut(s) | 145, 976 |
| TspDTI | ATGAA | 5 cut(s) | 39, 638, 935, 1334, 1421 |
| TspGWI | ACGGA | 1 cut(s) | 778 |
| TspRI | CASTG | 4 cut(s) | 93, 327, 494, 867 |
| Tth111I | GACNNNGTC | 1 cut(s) | 35 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 198, 931 |
| Vha464I | CTTAAG | 1 cut(s) | 980 |
| VpaK11BI | GGWCC | 2 cut(s) | 494, 773 |
| XapI | RAATTY | 2 cut(s) | 11, 292 |
| XceI | RCATGY | 1 cut(s) | 375 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 374 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1039 |
| XspI | CTAG | 3 cut(s) | 56, 297, 714 |
| ZrmI | AGTACT | 1 cut(s) | 54 |
| Zsp2I | ATGCAT | 2 cut(s) | 373, 466 |