Transcription factor bHLH3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16430 |
| fragaria_vesca | FvH4_2g22150 FvH4_2g22150 |
| malus_domestica | MD05G1202500.v1.1 MD05G1202900.v1.1 MD10G1190000.v1.1 |
| prunus_persica | Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 |
| pyrus_communis | pycom05g18900 pycom05g18950 pycom10g16360 pycom10g16370 |
| rosa_chinensis | RchiOBHm_Chr6g0288981 |
| rosa_laevigata | RLG00000012333 RLG00000013932 |
| rosa_multiflora | Rmu_sc0000666.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00179620 |
| rosa_rugosa | Rorug06G0199900 |
| rosa_samantha | Rh6AG311600 Rh6BG318100 Rh6CG325000 Rh6DG310800 |
| rosa_wichuraiana | Rw6G013790 Rw6G026880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 15 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 99, 832 |
| AccBSI | CCGCTC | 1 cut(s) | 985 |
| AccII | CGCG | 2 cut(s) | 191, 996 |
| AciI | CCGC | 5 cut(s) | 250, 282, 293, 443, 985 |
| AclWI | GGATC | 1 cut(s) | 136 |
| AcsI | RAATTY | 1 cut(s) | 193 |
| AcvI | CACGTG | 1 cut(s) | 973 |
| AdeI | CACNNNGTG | 1 cut(s) | 392 |
| AfaI | GTAC | 3 cut(s) | 519, 769, 1287 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 99, 141, 832, 858, 859, 947 |
| AflII | CTTAAG | 1 cut(s) | 881 |
| AgsI | TTSAA | 9 cut(s) | 354, 371, 752, 774, 847, 867, 967, 1127, 1404 |
| AjiI | CACGTC | 1 cut(s) | 656 |
| AjnI | CCWGG | 1 cut(s) | 507 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 412, 444 |
| AluBI | AGCT | 9 cut(s) | 64, 114, 182, 265, 829, 877, 1003, 1031, 1387 |
| AluI | AGCT | 9 cut(s) | 64, 114, 182, 265, 829, 877, 1003, 1031, 1387 |
| Alw26I | GTCTC | 1 cut(s) | 671 |
| AlwI | GGATC | 1 cut(s) | 136 |
| Ama87I | CYCGRG | 1 cut(s) | 668 |
| AoxI | GGCC | 1 cut(s) | 1392 |
| ApeKI | GCWGC | 1 cut(s) | 877 |
| ApoI | RAATTY | 1 cut(s) | 193 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 940 |
| AspLEI | GCGC | 1 cut(s) | 996 |
| AspS9I | GGNCC | 4 cut(s) | 35, 395, 504, 674 |
| AsuC2I | CCSGG | 1 cut(s) | 1244 |
| AsuHPI | GGTGA | 7 cut(s) | 158, 253, 809, 1087, 1088, 1232, 1373 |
| AsuII | TTCGAA | 1 cut(s) | 784 |
| AvaI | CYCGRG | 1 cut(s) | 668 |
| AvaII | GGWCC | 4 cut(s) | 35, 395, 504, 674 |
| BauI | CACGAG | 1 cut(s) | 1199 |
| BbrPI | CACGTG | 1 cut(s) | 973 |
| BbvI | GCAGC | 1 cut(s) | 864 |
| BccI | CCATC | 6 cut(s) | 143, 167, 311, 826, 1048, 1135 |
| BciT130I | CCWGG | 1 cut(s) | 509 |
| BciVI | GTATCC | 1 cut(s) | 157 |
| BcnI | CCSGG | 1 cut(s) | 1244 |
| BcoDI | GTCTC | 1 cut(s) | 671 |
| BfaI | CTAG | 2 cut(s) | 198, 615 |
| BfmI | CTRYAG | 2 cut(s) | 22, 399 |
| BfrI | CTTAAG | 1 cut(s) | 881 |
| BfuAI | ACCTGC | 1 cut(s) | 15 |
| BfuI | GTATCC | 1 cut(s) | 157 |
| BisI | GCNGC | 2 cut(s) | 878, 986 |
| BlsI | GCNGC | 2 cut(s) | 879, 987 |
| Bme1390I | CCNGG | 2 cut(s) | 509, 1244 |
| Bme18I | GGWCC | 4 cut(s) | 35, 395, 504, 674 |
| BmeT110I | CYCGRG | 1 cut(s) | 668 |
| BmgBI | CACGTC | 1 cut(s) | 656 |
| BmgT120I | GGNCC | 4 cut(s) | 35, 395, 504, 674 |
| BmiI | GGNNCC | 3 cut(s) | 506, 675, 1173 |
| BmrFI | CCNGG | 2 cut(s) | 509, 1244 |
| BmsI | GCATC | 4 cut(s) | 430, 644, 1069, 1195 |
| BpmI | CTGGAG | 3 cut(s) | 400, 723, 1088 |
| Bpu14I | TTCGAA | 1 cut(s) | 784 |
| BpuEI | CTTGAG | 2 cut(s) | 1275, 1338 |
| BpuMI | CCSGG | 1 cut(s) | 1244 |
| BsaAI | YACGTR | 1 cut(s) | 973 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1112 |
| BsaJI | CCNNGG | 3 cut(s) | 135, 168, 507 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 99, 141, 832, 858, 859, 947 |
| Bse118I | RCCGGY | 1 cut(s) | 1168 |
| Bse1I | ACTGG | 2 cut(s) | 466, 1236 |
| Bse3DI | GCAATG | 1 cut(s) | 154 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1112 |
| BseBI | CCWGG | 1 cut(s) | 509 |
| BseDI | CCNNGG | 3 cut(s) | 135, 168, 507 |
| BseGI | GGATG | 7 cut(s) | 178, 322, 892, 913, 1210, 1224, 1257 |
| BseJI | GATNNNNATC | 1 cut(s) | 1112 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 99, 141, 832, 858, 859, 947 |
| BseMI | GCAATG | 1 cut(s) | 154 |
| BseNI | ACTGG | 2 cut(s) | 466, 1236 |
| BseXI | GCAGC | 1 cut(s) | 864 |
| BseYI | CCCAGC | 2 cut(s) | 182, 494 |
| BsgI | GTGCAG | 1 cut(s) | 245 |
| Bsh1236I | CGCG | 2 cut(s) | 191, 996 |
| BshFI | GGCC | 1 cut(s) | 1394 |
| BsiHKCI | CYCGRG | 1 cut(s) | 668 |
| BsiSI | CCGG | 2 cut(s) | 1169, 1244 |
| BslFI | GGGAC | 1 cut(s) | 200 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 99, 141, 832, 858, 859, 947 |
| BsmAI | GTCTC | 1 cut(s) | 671 |
| BsmFI | GGGAC | 1 cut(s) | 200 |
| BsnI | GGCC | 1 cut(s) | 1394 |
| BsoBI | CYCGRG | 1 cut(s) | 668 |
| Bsp119I | TTCGAA | 1 cut(s) | 784 |
| Bsp143I | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| BspACI | CCGC | 5 cut(s) | 250, 282, 293, 443, 985 |
| BspANI | GGCC | 1 cut(s) | 1394 |
| BspFNI | CGCG | 2 cut(s) | 191, 996 |
| BspLI | GGNNCC | 3 cut(s) | 506, 675, 1173 |
| BspMAI | CTGCAG | 2 cut(s) | 26, 403 |
| BspMI | ACCTGC | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 136 |
| BspT104I | TTCGAA | 1 cut(s) | 784 |
| BspTI | CTTAAG | 1 cut(s) | 881 |
| BsrBI | CCGCTC | 1 cut(s) | 985 |
| BsrDI | GCAATG | 1 cut(s) | 154 |
| BsrFI | RCCGGY | 1 cut(s) | 1168 |
| BsrI | ACTGG | 2 cut(s) | 466, 1236 |
| BssAI | RCCGGY | 1 cut(s) | 1168 |
| BssECI | CCNNGG | 3 cut(s) | 135, 168, 507 |
| BssMI | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| BssSI | CACGAG | 1 cut(s) | 1199 |
| BssT1I | CCWWGG | 2 cut(s) | 135, 168 |
| Bst2BI | CACGAG | 1 cut(s) | 1199 |
| Bst2UI | CCWGG | 1 cut(s) | 509 |
| Bst4CI | ACNGT | 3 cut(s) | 57, 392, 810 |
| Bst6I | CTCTTC | 2 cut(s) | 231, 1074 |
| BstAFI | CTTAAG | 1 cut(s) | 881 |
| BstBAI | YACGTR | 1 cut(s) | 973 |
| BstBI | TTCGAA | 1 cut(s) | 784 |
| BstC8I | GCNNGC | 2 cut(s) | 62, 105 |
| BstDEI | CTNAG | 4 cut(s) | 662, 1025, 1050, 1268 |
| BstF5I | GGATG | 7 cut(s) | 178, 322, 892, 913, 1210, 1224, 1257 |
| BstFNI | CGCG | 2 cut(s) | 191, 996 |
| BstHHI | GCGC | 1 cut(s) | 996 |
| BstKTI | GATC | 4 cut(s) | 131, 476, 1102, 1116 |
| BstMAI | GTCTC | 1 cut(s) | 671 |
| BstMBI | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 188, 491, 991, 1000, 1028 |
| BstNI | CCWGG | 1 cut(s) | 509 |
| BstNSI | RCATGY | 3 cut(s) | 276, 293, 735 |
| BstSCI | CCNGG | 2 cut(s) | 507, 1242 |
| BstSFI | CTRYAG | 2 cut(s) | 22, 399 |
| BstUI | CGCG | 2 cut(s) | 191, 996 |
| BstV1I | GCAGC | 1 cut(s) | 864 |
| BstX2I | RGATCY | 1 cut(s) | 128 |
| BstYI | RGATCY | 1 cut(s) | 128 |
| BsuI | GTATCC | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 1394 |
| BtrI | CACGTC | 1 cut(s) | 656 |
| BtsCI | GGATG | 7 cut(s) | 178, 322, 892, 913, 1210, 1224, 1257 |
| BtsI | GCAGTG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 3 cut(s) | 228, 388, 1229 |
| BveI | ACCTGC | 1 cut(s) | 15 |
| Cac8I | GCNNGC | 2 cut(s) | 62, 105 |
| CfoI | GCGC | 1 cut(s) | 996 |
| Cfr10I | RCCGGY | 1 cut(s) | 1168 |
| Cfr13I | GGNCC | 4 cut(s) | 35, 395, 504, 674 |
| CseI | GACGC | 1 cut(s) | 197 |
| Csp6I | GTAC | 3 cut(s) | 518, 768, 1286 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 157, 192 |
| CviAII | CATG | 3 cut(s) | 273, 290, 732 |
| CviQI | GTAC | 3 cut(s) | 518, 768, 1286 |
| DdeI | CTNAG | 4 cut(s) | 662, 1025, 1050, 1268 |
| DpnI | GATC | 4 cut(s) | 130, 475, 1101, 1115 |
| DpnII | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| DraIII | CACNNNGTG | 1 cut(s) | 392 |
| Eam1104I | CTCTTC | 2 cut(s) | 231, 1074 |
| EarI | CTCTTC | 2 cut(s) | 231, 1074 |
| Eco130I | CCWWGG | 2 cut(s) | 135, 168 |
| Eco47I | GGWCC | 4 cut(s) | 35, 395, 504, 674 |
| Eco72I | CACGTG | 1 cut(s) | 973 |
| Eco88I | CYCGRG | 1 cut(s) | 668 |
| EcoRI | GAATTC | 1 cut(s) | 193 |
| EcoRII | CCWGG | 1 cut(s) | 507 |
| EcoT14I | CCWWGG | 2 cut(s) | 135, 168 |
| EcoT22I | ATGCAT | 1 cut(s) | 367 |
| ErhI | CCWWGG | 2 cut(s) | 135, 168 |
| FaeI | CATG | 3 cut(s) | 276, 293, 735 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1053, 1085 |
| FaqI | GGGAC | 1 cut(s) | 200 |
| FatI | CATG | 3 cut(s) | 272, 289, 731 |
| FauI | CCCGC | 2 cut(s) | 243, 436 |
| Fnu4HI | GCNGC | 2 cut(s) | 878, 986 |
| FokI | GGATG | 7 cut(s) | 185, 329, 899, 920, 1217, 1231, 1244 |
| Fsp4HI | GCNGC | 2 cut(s) | 878, 986 |
| FspBI | CTAG | 2 cut(s) | 198, 615 |
| GlaI | GCGC | 1 cut(s) | 995 |
| GluI | GCNGC | 2 cut(s) | 878, 986 |
| GsaI | CCCAGC | 2 cut(s) | 186, 498 |
| GsuI | CTGGAG | 3 cut(s) | 400, 723, 1088 |
| HaeIII | GGCC | 1 cut(s) | 1394 |
| HapII | CCGG | 2 cut(s) | 1169, 1244 |
| HgaI | GACGC | 1 cut(s) | 197 |
| HhaI | GCGC | 1 cut(s) | 996 |
| Hin1II | CATG | 3 cut(s) | 276, 293, 735 |
| Hin6I | GCGC | 1 cut(s) | 994 |
| HinP1I | GCGC | 1 cut(s) | 994 |
| HincII | GTYRAC | 4 cut(s) | 70, 694, 838, 1147 |
| HindII | GTYRAC | 4 cut(s) | 70, 694, 838, 1147 |
| HindIII | AAGCTT | 1 cut(s) | 1001 |
| HpaI | GTTAAC | 2 cut(s) | 694, 1147 |
| HpaII | CCGG | 2 cut(s) | 1169, 1244 |
| HphI | GGTGA | 7 cut(s) | 158, 253, 809, 1087, 1088, 1232, 1373 |
| Hpy166II | GTNNAC | 7 cut(s) | 70, 287, 455, 659, 694, 838, 1147 |
| Hpy188I | TCNGA | 9 cut(s) | 328, 439, 504, 568, 596, 874, 1118, 1252, 1262 |
| Hpy8I | GTNNAC | 7 cut(s) | 70, 287, 455, 659, 694, 838, 1147 |
| HpyAV | CCTTC | 4 cut(s) | 48, 951, 1152, 1410 |
| HpyCH4III | ACNGT | 3 cut(s) | 57, 392, 810 |
| HpyCH4IV | ACGT | 2 cut(s) | 655, 972 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 188, 491, 991, 1000, 1028 |
| HpyF3I | CTNAG | 4 cut(s) | 662, 1025, 1050, 1268 |
| HpySE526I | ACGT | 2 cut(s) | 655, 972 |
| Hsp92II | CATG | 3 cut(s) | 276, 293, 735 |
| HspAI | GCGC | 1 cut(s) | 994 |
| KspAI | GTTAAC | 2 cut(s) | 694, 1147 |
| Kzo9I | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| LmnI | GCTCC | 3 cut(s) | 179, 270, 874 |
| Lsp1109I | GCAGC | 1 cut(s) | 864 |
| LweI | GCATC | 4 cut(s) | 430, 644, 1069, 1195 |
| MaeI | CTAG | 2 cut(s) | 198, 615 |
| MaeII | ACGT | 2 cut(s) | 655, 972 |
| MaeIII | GTNAC | 1 cut(s) | 681 |
| MalI | GATC | 4 cut(s) | 130, 475, 1101, 1115 |
| MbiI | CCGCTC | 1 cut(s) | 985 |
| MboI | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| MboII | GAAGA | 8 cut(s) | 248, 256, 581, 731, 734, 968, 1061, 1123 |
| MflI | RGATCY | 1 cut(s) | 128 |
| MluCI | AATT | 7 cut(s) | 79, 85, 193, 298, 426, 752, 1281 |
| MlyI | GAGTC | 5 cut(s) | 413, 752, 899, 1128, 1304 |
| MmeI | TCCRAC | 1 cut(s) | 294 |
| Mph1103I | ATGCAT | 1 cut(s) | 367 |
| MroXI | GAANNNNTTC | 1 cut(s) | 940 |
| MseI | TTAA | 7 cut(s) | 12, 50, 693, 882, 1005, 1146, 1347 |
| MslI | CAYNNNNRTG | 2 cut(s) | 353, 1203 |
| MspA1I | CMGCKG | 1 cut(s) | 829 |
| MspCI | CTTAAG | 1 cut(s) | 881 |
| MspI | CCGG | 2 cut(s) | 1169, 1244 |
| MspR9I | CCNGG | 2 cut(s) | 509, 1244 |
| MvaI | CCWGG | 1 cut(s) | 509 |
| MvnI | CGCG | 2 cut(s) | 191, 996 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 188, 491, 991, 1000, 1028 |
| NciI | CCSGG | 1 cut(s) | 1244 |
| NdeII | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| NlaIII | CATG | 3 cut(s) | 276, 293, 735 |
| NlaIV | GGNNCC | 3 cut(s) | 506, 675, 1173 |
| NmuCI | GTSAC | 1 cut(s) | 681 |
| NsiI | ATGCAT | 1 cut(s) | 367 |
| NspI | RCATGY | 3 cut(s) | 276, 293, 735 |
| NspV | TTCGAA | 1 cut(s) | 784 |
| PdmI | GAANNNNTTC | 1 cut(s) | 940 |
| PfeI | GAWTC | 6 cut(s) | 4, 377, 611, 843, 967, 1235 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 99, 832 |
| PkrI | GCNGC | 2 cut(s) | 879, 987 |
| PleI | GAGTC | 5 cut(s) | 412, 751, 898, 1127, 1303 |
| PmaCI | CACGTG | 1 cut(s) | 973 |
| PmlI | CACGTG | 1 cut(s) | 973 |
| PpsI | GAGTC | 5 cut(s) | 412, 751, 898, 1127, 1303 |
| Ppu21I | YACGTR | 1 cut(s) | 973 |
| Psp6I | CCWGG | 1 cut(s) | 507 |
| PspCI | CACGTG | 1 cut(s) | 973 |
| PspFI | CCCAGC | 2 cut(s) | 182, 494 |
| PspGI | CCWGG | 1 cut(s) | 507 |
| PspN4I | GGNNCC | 3 cut(s) | 506, 675, 1173 |
| PspPI | GGNCC | 4 cut(s) | 35, 395, 504, 674 |
| PstI | CTGCAG | 2 cut(s) | 26, 403 |
| PsuI | RGATCY | 1 cut(s) | 128 |
| PvuII | CAGCTG | 1 cut(s) | 829 |
| RsaI | GTAC | 3 cut(s) | 519, 769, 1287 |
| RsaNI | GTAC | 3 cut(s) | 518, 768, 1286 |
| RseI | CAYNNNNRTG | 2 cut(s) | 353, 1203 |
| SaqAI | TTAA | 7 cut(s) | 12, 50, 693, 882, 1005, 1146, 1347 |
| SatI | GCNGC | 2 cut(s) | 878, 986 |
| Sau3AI | GATC | 4 cut(s) | 128, 473, 1099, 1113 |
| Sau96I | GGNCC | 4 cut(s) | 35, 395, 504, 674 |
| SchI | GAGTC | 5 cut(s) | 413, 752, 899, 1128, 1304 |
| ScrFI | CCNGG | 2 cut(s) | 509, 1244 |
| SfaNI | GCATC | 4 cut(s) | 430, 644, 1069, 1195 |
| SfcI | CTRYAG | 2 cut(s) | 22, 399 |
| SfuI | TTCGAA | 1 cut(s) | 784 |
| SinI | GGWCC | 4 cut(s) | 35, 395, 504, 674 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 353, 1203 |
| SmlI | CTYRAG | 3 cut(s) | 881, 1290, 1353 |
| SmoI | CTYRAG | 3 cut(s) | 881, 1290, 1353 |
| Sse9I | AATT | 7 cut(s) | 79, 85, 193, 298, 426, 752, 1281 |
| SsiI | CCGC | 5 cut(s) | 250, 282, 293, 443, 985 |
| SspMI | CTAG | 2 cut(s) | 198, 615 |
| StyD4I | CCNGG | 2 cut(s) | 507, 1242 |
| StyI | CCWWGG | 2 cut(s) | 135, 168 |
| TaaI | ACNGT | 3 cut(s) | 57, 392, 810 |
| TaiI | ACGT | 2 cut(s) | 658, 975 |
| TaqI | TCGA | 7 cut(s) | 77, 116, 258, 380, 470, 784, 896 |
| TaqII | GACCGA | 1 cut(s) | 541 |
| TasI | AATT | 7 cut(s) | 79, 85, 193, 298, 426, 752, 1281 |
| TauI | GCSGC | 1 cut(s) | 988 |
| TfiI | GAWTC | 6 cut(s) | 4, 377, 611, 843, 967, 1235 |
| Tru1I | TTAA | 7 cut(s) | 12, 50, 693, 882, 1005, 1146, 1347 |
| Tru9I | TTAA | 7 cut(s) | 12, 50, 693, 882, 1005, 1146, 1347 |
| TscAI | CASTG | 3 cut(s) | 228, 395, 1236 |
| TseFI | GTSAC | 1 cut(s) | 681 |
| TseI | GCWGC | 1 cut(s) | 877 |
| Tsp45I | GTSAC | 1 cut(s) | 681 |
| TspDTI | ATGAA | 6 cut(s) | 539, 836, 924, 1124, 1235, 1322 |
| TspGWI | ACGGA | 2 cut(s) | 679, 855 |
| TspRI | CASTG | 3 cut(s) | 228, 395, 1236 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 99, 832 |
| Vha464I | CTTAAG | 1 cut(s) | 881 |
| VpaK11BI | GGWCC | 4 cut(s) | 35, 395, 504, 674 |
| XapI | RAATTY | 1 cut(s) | 193 |
| XceI | RCATGY | 3 cut(s) | 276, 293, 735 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 275 |
| XmnI | GAANNNNTTC | 1 cut(s) | 940 |
| XspI | CTAG | 2 cut(s) | 198, 615 |
| Zsp2I | ATGCAT | 1 cut(s) | 367 |