Transcription factor bHLH3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16430 |
| fragaria_vesca | FvH4_2g22150 FvH4_2g22150 |
| malus_domestica | MD05G1202500.v1.1 MD05G1202900.v1.1 MD10G1190000.v1.1 |
| prunus_persica | Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 |
| pyrus_communis | pycom05g18900 pycom05g18950 pycom10g16360 pycom10g16370 |
| rosa_chinensis | RchiOBHm_Chr6g0288981 |
| rosa_laevigata | RLG00000012333 RLG00000013932 |
| rosa_multiflora | Rmu_sc0000666.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00179620 |
| rosa_rugosa | Rorug06G0199900 |
| rosa_samantha | Rh6AG311600 Rh6BG318100 Rh6CG325000 Rh6DG310800 |
| rosa_wichuraiana | Rw6G013790 Rw6G026880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 427 |
| AccB1I | GGYRCC | 1 cut(s) | 293 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 838 |
| AccBSI | CCGCTC | 1 cut(s) | 1315 |
| AccII | CGCG | 1 cut(s) | 223 |
| AccIII | TCCGGA | 1 cut(s) | 895 |
| AciI | CCGC | 9 cut(s) | 47, 170, 173, 200, 221, 1145, 1315, 1342, 1559 |
| AclWI | GGATC | 1 cut(s) | 660 |
| AcsI | RAATTY | 2 cut(s) | 701, 1171 |
| AcuI | CTGAAG | 1 cut(s) | 1053 |
| AfaI | GTAC | 3 cut(s) | 695, 740, 849 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 432, 474, 838, 1277, 1685 |
| AflII | CTTAAG | 1 cut(s) | 1598 |
| AhlI | ACTAGT | 1 cut(s) | 776 |
| AjnI | CCWGG | 3 cut(s) | 361, 727, 1518 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 326, 358, 1162, 1194 |
| Alw21I | GWGCWC | 1 cut(s) | 137 |
| Alw26I | GTCTC | 4 cut(s) | 489, 513, 1001, 1043 |
| AlwI | GGATC | 1 cut(s) | 660 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 388 |
| Aor13HI | TCCGGA | 1 cut(s) | 895 |
| AoxI | GGCC | 3 cut(s) | 86, 356, 1722 |
| ApeKI | GCWGC | 7 cut(s) | 74, 102, 105, 379, 464, 1207, 1482 |
| ApoI | RAATTY | 2 cut(s) | 701, 1171 |
| AseI | ATTAAT | 1 cut(s) | 1023 |
| AspS9I | GGNCC | 3 cut(s) | 408, 725, 1004 |
| AsuC2I | CCSGG | 1 cut(s) | 1574 |
| AsuHPI | GGTGA | 9 cut(s) | 187, 251, 265, 589, 638, 708, 1418, 1562, 1703 |
| AvaII | GGWCC | 3 cut(s) | 408, 725, 1004 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1617, 1650 |
| BanI | GGYRCC | 1 cut(s) | 293 |
| BauI | CACGAG | 1 cut(s) | 1529 |
| BbsI | GAAGAC | 1 cut(s) | 421 |
| Bbv12I | GWGCWC | 1 cut(s) | 137 |
| BbvI | GCAGC | 7 cut(s) | 61, 114, 117, 391, 451, 1194, 1494 |
| BccI | CCATC | 4 cut(s) | 229, 476, 1378, 1465 |
| BceAI | ACGGC | 3 cut(s) | 177, 410, 1541 |
| BciT130I | CCWGG | 3 cut(s) | 363, 729, 1520 |
| BcnI | CCSGG | 1 cut(s) | 1574 |
| BcoDI | GTCTC | 4 cut(s) | 489, 513, 1001, 1043 |
| BcuI | ACTAGT | 1 cut(s) | 776 |
| BfaI | CTAG | 8 cut(s) | 41, 290, 354, 531, 777, 816, 945, 1251 |
| BfmI | CTRYAG | 2 cut(s) | 75, 1182 |
| BfrI | CTTAAG | 1 cut(s) | 1598 |
| BfuAI | ACCTGC | 1 cut(s) | 427 |
| Bme1390I | CCNGG | 4 cut(s) | 363, 729, 1520, 1574 |
| Bme18I | GGWCC | 3 cut(s) | 408, 725, 1004 |
| BmgT120I | GGNCC | 3 cut(s) | 408, 725, 1004 |
| BmiI | GGNNCC | 3 cut(s) | 295, 409, 830 |
| BmrFI | CCNGG | 4 cut(s) | 363, 729, 1520, 1574 |
| BmrI | ACTGGG | 1 cut(s) | 1493 |
| BmsI | GCATC | 3 cut(s) | 1399, 1525, 1684 |
| BmuI | ACTGGG | 1 cut(s) | 1493 |
| BpiI | GAAGAC | 1 cut(s) | 421 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1040, 1072 |
| BpmI | CTGGAG | 2 cut(s) | 345, 1418 |
| BpuEI | CTTGAG | 3 cut(s) | 1171, 1605, 1668 |
| BpuMI | CCSGG | 1 cut(s) | 1574 |
| BsaBI | GATNNNNATC | 3 cut(s) | 314, 451, 1442 |
| BsaJI | CCNNGG | 4 cut(s) | 159, 403, 728, 1402 |
| BsaWI | WCCGGW | 1 cut(s) | 895 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 63, 93, 169, 199 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 432, 474, 838, 1277, 1685 |
| Bse1I | ACTGG | 3 cut(s) | 411, 796, 1499 |
| Bse3DI | GCAATG | 1 cut(s) | 487 |
| Bse8I | GATNNNNATC | 3 cut(s) | 314, 451, 1442 |
| BseAI | TCCGGA | 1 cut(s) | 895 |
| BseBI | CCWGG | 3 cut(s) | 363, 729, 1520 |
| BseDI | CCNNGG | 4 cut(s) | 159, 403, 728, 1402 |
| BseGI | GGATG | 6 cut(s) | 123, 220, 922, 1115, 1540, 1739 |
| BseJI | GATNNNNATC | 3 cut(s) | 314, 451, 1442 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 432, 474, 838, 1277, 1685 |
| BseMI | GCAATG | 1 cut(s) | 487 |
| BseMII | CTCAG | 2 cut(s) | 1110, 1452 |
| BseNI | ACTGG | 3 cut(s) | 411, 796, 1499 |
| BseRI | GAGGAG | 1 cut(s) | 658 |
| BseXI | GCAGC | 7 cut(s) | 61, 114, 117, 391, 451, 1194, 1494 |
| BsgI | GTGCAG | 1 cut(s) | 398 |
| Bsh1236I | CGCG | 1 cut(s) | 223 |
| BshFI | GGCC | 3 cut(s) | 88, 358, 1724 |
| BshNI | GGYRCC | 1 cut(s) | 293 |
| BsiHKAI | GWGCWC | 1 cut(s) | 137 |
| BsiSI | CCGG | 2 cut(s) | 896, 1574 |
| BslFI | GGGAC | 1 cut(s) | 108 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 432, 474, 838, 1277, 1685 |
| BsmAI | GTCTC | 4 cut(s) | 489, 513, 1001, 1043 |
| BsmBI | CGTCTC | 1 cut(s) | 513 |
| BsmFI | GGGAC | 1 cut(s) | 108 |
| BsmI | GAATGC | 1 cut(s) | 561 |
| BsnI | GGCC | 3 cut(s) | 88, 358, 1724 |
| Bsp1286I | GDGCHC | 1 cut(s) | 137 |
| Bsp13I | TCCGGA | 1 cut(s) | 895 |
| Bsp143I | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| BspACI | CCGC | 9 cut(s) | 47, 170, 173, 200, 221, 1145, 1315, 1342, 1559 |
| BspANI | GGCC | 3 cut(s) | 88, 358, 1724 |
| BspCNI | CTCAG | 2 cut(s) | 1111, 1453 |
| BspEI | TCCGGA | 1 cut(s) | 895 |
| BspFNI | CGCG | 1 cut(s) | 223 |
| BspLI | GGNNCC | 3 cut(s) | 295, 409, 830 |
| BspMAI | CTGCAG | 1 cut(s) | 79 |
| BspMI | ACCTGC | 1 cut(s) | 427 |
| BspPI | GGATC | 1 cut(s) | 660 |
| BspT107I | GGYRCC | 1 cut(s) | 293 |
| BspTI | CTTAAG | 1 cut(s) | 1598 |
| BsrBI | CCGCTC | 1 cut(s) | 1315 |
| BsrDI | GCAATG | 1 cut(s) | 487 |
| BsrI | ACTGG | 3 cut(s) | 411, 796, 1499 |
| BssECI | CCNNGG | 4 cut(s) | 159, 403, 728, 1402 |
| BssMI | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| BssSI | CACGAG | 1 cut(s) | 1529 |
| BssT1I | CCWWGG | 2 cut(s) | 403, 1402 |
| Bst2BI | CACGAG | 1 cut(s) | 1529 |
| Bst2UI | CCWGG | 3 cut(s) | 363, 729, 1520 |
| Bst4CI | ACNGT | 4 cut(s) | 720, 838, 1140, 1657 |
| Bst6I | CTCTTC | 2 cut(s) | 1063, 1276 |
| BstAFI | CTTAAG | 1 cut(s) | 1598 |
| BstC8I | GCNNGC | 3 cut(s) | 304, 1272, 1559 |
| BstDEI | CTNAG | 4 cut(s) | 992, 1119, 1355, 1461 |
| BstDSI | CCRYGG | 1 cut(s) | 159 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1683 |
| BstF5I | GGATG | 6 cut(s) | 123, 220, 922, 1115, 1540, 1739 |
| BstFNI | CGCG | 1 cut(s) | 223 |
| BstKTI | GATC | 5 cut(s) | 318, 655, 806, 1432, 1446 |
| BstMAI | GTCTC | 4 cut(s) | 489, 513, 1001, 1043 |
| BstMBI | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| BstNI | CCWGG | 3 cut(s) | 363, 729, 1520 |
| BstSCI | CCNGG | 4 cut(s) | 361, 727, 1518, 1572 |
| BstSFI | CTRYAG | 2 cut(s) | 75, 1182 |
| BstUI | CGCG | 1 cut(s) | 223 |
| BstV1I | GCAGC | 7 cut(s) | 61, 114, 117, 391, 451, 1194, 1494 |
| BstV2I | GAAGAC | 1 cut(s) | 421 |
| BsuRI | GGCC | 3 cut(s) | 88, 358, 1724 |
| BtgI | CCRYGG | 1 cut(s) | 159 |
| BtgZI | GCGATG | 1 cut(s) | 495 |
| BtsCI | GGATG | 6 cut(s) | 123, 220, 922, 1115, 1540, 1739 |
| BtsI | GCAGTG | 2 cut(s) | 84, 115 |
| BtsIMutI | CAGTG | 4 cut(s) | 84, 115, 291, 843 |
| BveI | ACCTGC | 1 cut(s) | 427 |
| Cac8I | GCNNGC | 3 cut(s) | 304, 1272, 1559 |
| CaiI | CAGNNNCTG | 1 cut(s) | 388 |
| Cfr13I | GGNCC | 3 cut(s) | 408, 725, 1004 |
| Csp6I | GTAC | 3 cut(s) | 694, 739, 848 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 127, 162, 490, 525 |
| CviAII | CATG | 7 cut(s) | 98, 609, 807, 986, 1301, 1453, 1744 |
| CviQI | GTAC | 3 cut(s) | 694, 739, 848 |
| DdeI | CTNAG | 4 cut(s) | 992, 1119, 1355, 1461 |
| DpnI | GATC | 5 cut(s) | 317, 654, 805, 1431, 1445 |
| DpnII | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| DraI | TTTAAA | 1 cut(s) | 700 |
| Eam1104I | CTCTTC | 2 cut(s) | 1063, 1276 |
| EarI | CTCTTC | 2 cut(s) | 1063, 1276 |
| Eco130I | CCWWGG | 2 cut(s) | 403, 1402 |
| Eco147I | AGGCCT | 1 cut(s) | 358 |
| Eco47I | GGWCC | 3 cut(s) | 408, 725, 1004 |
| Eco57I | CTGAAG | 1 cut(s) | 1053 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1683 |
| EcoRII | CCWGG | 3 cut(s) | 361, 727, 1518 |
| EcoT14I | CCWWGG | 2 cut(s) | 403, 1402 |
| ErhI | CCWWGG | 2 cut(s) | 403, 1402 |
| Esp3I | CGTCTC | 1 cut(s) | 513 |
| FaeI | CATG | 7 cut(s) | 101, 612, 810, 989, 1304, 1456, 1747 |
| FaqI | GGGAC | 1 cut(s) | 108 |
| FatI | CATG | 7 cut(s) | 97, 608, 806, 985, 1300, 1452, 1743 |
| FauI | CCCGC | 2 cut(s) | 207, 1566 |
| FokI | GGATG | 6 cut(s) | 130, 227, 929, 1122, 1547, 1726 |
| FspBI | CTAG | 8 cut(s) | 41, 290, 354, 531, 777, 816, 945, 1251 |
| GsuI | CTGGAG | 2 cut(s) | 345, 1418 |
| HaeIII | GGCC | 3 cut(s) | 88, 358, 1724 |
| HapII | CCGG | 2 cut(s) | 896, 1574 |
| Hin1II | CATG | 7 cut(s) | 101, 612, 810, 989, 1304, 1456, 1747 |
| HindIII | AAGCTT | 2 cut(s) | 245, 1331 |
| HinfI | GANTC | 9 cut(s) | 281, 713, 734, 941, 1055, 1073, 1220, 1297, 1565 |
| HpaII | CCGG | 2 cut(s) | 896, 1574 |
| HphI | GGTGA | 9 cut(s) | 187, 251, 265, 589, 638, 708, 1418, 1562, 1703 |
| Hpy188I | TCNGA | 8 cut(s) | 331, 346, 664, 926, 1072, 1204, 1582, 1592 |
| Hpy188III | TCNNGA | 6 cut(s) | 801, 861, 896, 1435, 1505, 1622 |
| HpyAV | CCTTC | 2 cut(s) | 160, 1077 |
| HpyCH4III | ACNGT | 4 cut(s) | 720, 838, 1140, 1657 |
| HpyCH4V | TGCA | 5 cut(s) | 77, 379, 492, 559, 1492 |
| HpyF3I | CTNAG | 4 cut(s) | 992, 1119, 1355, 1461 |
| Hsp92II | CATG | 7 cut(s) | 101, 612, 810, 989, 1304, 1456, 1747 |
| Kpn2I | TCCGGA | 1 cut(s) | 895 |
| Kzo9I | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| LmnI | GCTCC | 4 cut(s) | 71, 461, 606, 871 |
| Lsp1109I | GCAGC | 7 cut(s) | 61, 114, 117, 391, 451, 1194, 1494 |
| LweI | GCATC | 3 cut(s) | 1399, 1525, 1684 |
| MaeI | CTAG | 8 cut(s) | 41, 290, 354, 531, 777, 816, 945, 1251 |
| MaeIII | GTNAC | 3 cut(s) | 175, 772, 1639 |
| MalI | GATC | 5 cut(s) | 317, 654, 805, 1431, 1445 |
| MbiI | CCGCTC | 1 cut(s) | 1315 |
| MboI | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| MfeI | CAATTG | 1 cut(s) | 368 |
| MhlI | GDGCHC | 1 cut(s) | 137 |
| MluCI | AATT | 8 cut(s) | 228, 368, 701, 756, 891, 1158, 1171, 1233 |
| MlyI | GAGTC | 4 cut(s) | 290, 743, 1049, 1229 |
| MmeI | TCCRAC | 3 cut(s) | 369, 496, 630 |
| MroI | TCCGGA | 1 cut(s) | 895 |
| MseI | TTAA | 7 cut(s) | 231, 699, 1023, 1134, 1335, 1599, 1706 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1533 |
| MspA1I | CMGCKG | 3 cut(s) | 1187, 1342, 1561 |
| MspCI | CTTAAG | 1 cut(s) | 1598 |
| MspI | CCGG | 2 cut(s) | 896, 1574 |
| MspR9I | CCNGG | 4 cut(s) | 363, 729, 1520, 1574 |
| MunI | CAATTG | 1 cut(s) | 368 |
| Mva1269I | GAATGC | 1 cut(s) | 561 |
| MvaI | CCWGG | 3 cut(s) | 363, 729, 1520 |
| MvnI | CGCG | 1 cut(s) | 223 |
| NciI | CCSGG | 1 cut(s) | 1574 |
| NdeII | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| NlaIII | CATG | 7 cut(s) | 101, 612, 810, 989, 1304, 1456, 1747 |
| NlaIV | GGNNCC | 3 cut(s) | 295, 409, 830 |
| NmeAIII | GCCGAG | 1 cut(s) | 1723 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| PceI | AGGCCT | 1 cut(s) | 358 |
| PctI | GAATGC | 1 cut(s) | 561 |
| PfeI | GAWTC | 5 cut(s) | 713, 941, 1073, 1297, 1565 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 838 |
| PfoI | TCCNGGA | 2 cut(s) | 361, 1518 |
| PleI | GAGTC | 4 cut(s) | 289, 742, 1049, 1228 |
| PpsI | GAGTC | 4 cut(s) | 289, 742, 1049, 1228 |
| PshBI | ATTAAT | 1 cut(s) | 1023 |
| Psp6I | CCWGG | 3 cut(s) | 361, 727, 1518 |
| PspGI | CCWGG | 3 cut(s) | 361, 727, 1518 |
| PspN4I | GGNNCC | 3 cut(s) | 295, 409, 830 |
| PspPI | GGNCC | 3 cut(s) | 408, 725, 1004 |
| PstI | CTGCAG | 1 cut(s) | 79 |
| PstNI | CAGNNNCTG | 1 cut(s) | 388 |
| PvuII | CAGCTG | 1 cut(s) | 1187 |
| RsaI | GTAC | 3 cut(s) | 695, 740, 849 |
| RsaNI | GTAC | 3 cut(s) | 694, 739, 848 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1533 |
| SaqAI | TTAA | 7 cut(s) | 231, 699, 1023, 1134, 1335, 1599, 1706 |
| Sau3AI | GATC | 5 cut(s) | 315, 652, 803, 1429, 1443 |
| Sau96I | GGNCC | 3 cut(s) | 408, 725, 1004 |
| SchI | GAGTC | 4 cut(s) | 290, 743, 1049, 1229 |
| ScrFI | CCNGG | 4 cut(s) | 363, 729, 1520, 1574 |
| SduI | GDGCHC | 1 cut(s) | 137 |
| SfaNI | GCATC | 3 cut(s) | 1399, 1525, 1684 |
| SfcI | CTRYAG | 2 cut(s) | 75, 1182 |
| SinI | GGWCC | 3 cut(s) | 408, 725, 1004 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1533 |
| SmlI | CTYRAG | 4 cut(s) | 1150, 1598, 1620, 1683 |
| SmoI | CTYRAG | 4 cut(s) | 1150, 1598, 1620, 1683 |
| SpeI | ACTAGT | 1 cut(s) | 776 |
| Sse9I | AATT | 8 cut(s) | 228, 368, 701, 756, 891, 1158, 1171, 1233 |
| SseBI | AGGCCT | 1 cut(s) | 358 |
| SsiI | CCGC | 9 cut(s) | 47, 170, 173, 200, 221, 1145, 1315, 1342, 1559 |
| SspI | AATATT | 2 cut(s) | 910, 1027 |
| SspMI | CTAG | 8 cut(s) | 41, 290, 354, 531, 777, 816, 945, 1251 |
| StuI | AGGCCT | 1 cut(s) | 358 |
| StyD4I | CCNGG | 4 cut(s) | 361, 727, 1518, 1572 |
| StyI | CCWWGG | 2 cut(s) | 403, 1402 |
| TaaI | ACNGT | 4 cut(s) | 720, 838, 1140, 1657 |
| TaqI | TCGA | 3 cut(s) | 800, 1114, 1379 |
| TasI | AATT | 8 cut(s) | 228, 368, 701, 756, 891, 1158, 1171, 1233 |
| TatI | WGTACW | 1 cut(s) | 693 |
| TauI | GCSGC | 3 cut(s) | 173, 223, 1318 |
| TfiI | GAWTC | 5 cut(s) | 713, 941, 1073, 1297, 1565 |
| Tru1I | TTAA | 7 cut(s) | 231, 699, 1023, 1134, 1335, 1599, 1706 |
| Tru9I | TTAA | 7 cut(s) | 231, 699, 1023, 1134, 1335, 1599, 1706 |
| TscAI | CASTG | 4 cut(s) | 84, 115, 291, 843 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| TseI | GCWGC | 7 cut(s) | 74, 102, 105, 379, 464, 1207, 1482 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspGWI | ACGGA | 2 cut(s) | 1122, 1627 |
| TspRI | CASTG | 4 cut(s) | 84, 115, 291, 843 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 838 |
| Vha464I | CTTAAG | 1 cut(s) | 1598 |
| VpaK11BI | GGWCC | 3 cut(s) | 408, 725, 1004 |
| VspI | ATTAAT | 1 cut(s) | 1023 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1683 |
| XapI | RAATTY | 2 cut(s) | 701, 1171 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1163 |
| XspI | CTAG | 8 cut(s) | 41, 290, 354, 531, 777, 816, 945, 1251 |