Transcription factor bHLH3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16430 |
| fragaria_vesca | FvH4_2g22150 FvH4_2g22150 |
| malus_domestica | MD05G1202500.v1.1 MD05G1202900.v1.1 MD10G1190000.v1.1 |
| prunus_persica | Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 |
| pyrus_communis | pycom05g18900 pycom05g18950 pycom10g16360 pycom10g16370 |
| rosa_chinensis | RchiOBHm_Chr6g0288981 |
| rosa_laevigata | RLG00000012333 RLG00000013932 |
| rosa_multiflora | Rmu_sc0000666.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00179620 |
| rosa_rugosa | Rorug06G0199900 |
| rosa_samantha | Rh6AG311600 Rh6BG318100 Rh6CG325000 Rh6DG310800 |
| rosa_wichuraiana | Rw6G013790 Rw6G026880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 198, 598, 922 |
| AccBSI | CCGCTC | 2 cut(s) | 1003, 1075 |
| AccII | CGCG | 2 cut(s) | 747, 1086 |
| AciI | CCGC | 5 cut(s) | 125, 276, 905, 1003, 1075 |
| AclWI | GGATC | 3 cut(s) | 168, 181, 235 |
| AcoI | YGGCCR | 1 cut(s) | 582 |
| AcsI | RAATTY | 3 cut(s) | 11, 292, 688 |
| AcuI | CTGAAG | 2 cut(s) | 84, 1362 |
| AdeI | CACNNNGTG | 1 cut(s) | 482 |
| AfaI | GTAC | 5 cut(s) | 54, 61, 500, 609, 859 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 198, 240, 598, 922, 1037, 1445 |
| AflIII | ACRYGT | 1 cut(s) | 371 |
| AgsI | TTSAA | 9 cut(s) | 450, 467, 842, 864, 913, 957, 1057, 1398, 1494 |
| AjnI | CCWGG | 2 cut(s) | 127, 487 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 284, 316, 1304, 1336 |
| AluBI | AGCT | 8 cut(s) | 163, 364, 634, 751, 967, 1093, 1121, 1477 |
| AluI | AGCT | 8 cut(s) | 163, 364, 634, 751, 967, 1093, 1121, 1477 |
| Alw21I | GWGCWC | 2 cut(s) | 753, 943 |
| Alw26I | GTCTC | 2 cut(s) | 255, 1489 |
| AlwI | GGATC | 3 cut(s) | 168, 181, 235 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1340 |
| AoxI | GGCC | 3 cut(s) | 122, 582, 763 |
| ApeKI | GCWGC | 2 cut(s) | 145, 967 |
| ApoI | RAATTY | 3 cut(s) | 11, 292, 688 |
| AspLEI | GCGC | 1 cut(s) | 1086 |
| AspS9I | GGNCC | 2 cut(s) | 485, 764 |
| AsuC2I | CCSGG | 1 cut(s) | 586 |
| AsuHPI | GGTGA | 7 cut(s) | 31, 257, 352, 710, 1178, 1322, 1463 |
| AsuII | TTCGAA | 1 cut(s) | 1139 |
| AvaII | GGWCC | 1 cut(s) | 485 |
| AxyI | CCTNAGG | 1 cut(s) | 972 |
| BamHI | GGATCC | 1 cut(s) | 173 |
| BanII | GRGCYC | 1 cut(s) | 753 |
| BbsI | GAAGAC | 1 cut(s) | 36 |
| Bbv12I | GWGCWC | 2 cut(s) | 753, 943 |
| BbvCI | CCTCAGC | 1 cut(s) | 985 |
| BbvI | GCAGC | 2 cut(s) | 157, 954 |
| BccI | CCATC | 7 cut(s) | 242, 266, 299, 407, 916, 1138, 1225 |
| BciT130I | CCWGG | 2 cut(s) | 129, 489 |
| BcnI | CCSGG | 1 cut(s) | 586 |
| BcoDI | GTCTC | 2 cut(s) | 255, 1489 |
| BfaI | CTAG | 5 cut(s) | 56, 297, 402, 671, 705 |
| BfmI | CTRYAG | 1 cut(s) | 256 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BisI | GCNGC | 4 cut(s) | 125, 146, 968, 1076 |
| BlsI | GCNGC | 4 cut(s) | 126, 147, 969, 1077 |
| BmcAI | AGTACT | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 3 cut(s) | 129, 489, 586 |
| Bme18I | GGWCC | 1 cut(s) | 485 |
| BmgT120I | GGNCC | 2 cut(s) | 485, 764 |
| BmiI | GGNNCC | 3 cut(s) | 175, 590, 1263 |
| BmrFI | CCNGG | 3 cut(s) | 129, 489, 586 |
| BmrI | ACTGGG | 1 cut(s) | 1328 |
| BmsI | GCATC | 3 cut(s) | 1159, 1285, 1444 |
| BmuI | ACTGGG | 1 cut(s) | 1328 |
| BpiI | GAAGAC | 1 cut(s) | 36 |
| BpmI | CTGGAG | 2 cut(s) | 813, 1178 |
| Bpu10I | CCTNAGC | 1 cut(s) | 985 |
| Bpu14I | TTCGAA | 1 cut(s) | 1139 |
| BpuEI | CTTGAG | 3 cut(s) | 377, 1365, 1428 |
| BpuMI | CCSGG | 1 cut(s) | 586 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1202 |
| BsaI | GGTCTC | 1 cut(s) | 1489 |
| BsaJI | CCNNGG | 1 cut(s) | 488 |
| BsaWI | WCCGGW | 2 cut(s) | 506, 1258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 811, 841 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 198, 240, 598, 922, 1037, 1445 |
| Bse1I | ACTGG | 3 cut(s) | 73, 556, 1334 |
| Bse21I | CCTNAGG | 1 cut(s) | 972 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1202 |
| BseBI | CCWGG | 2 cut(s) | 129, 489 |
| BseDI | CCNNGG | 1 cut(s) | 488 |
| BseGI | GGATG | 9 cut(s) | 159, 277, 310, 394, 418, 875, 982, 1300, 1314 |
| BseJI | GATNNNNATC | 1 cut(s) | 1202 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 198, 240, 598, 922, 1037, 1445 |
| BseMII | CTCAG | 2 cut(s) | 766, 999 |
| BseNI | ACTGG | 3 cut(s) | 73, 556, 1334 |
| BseRI | GAGGAG | 1 cut(s) | 350 |
| BseXI | GCAGC | 2 cut(s) | 157, 954 |
| BseYI | CCCAGC | 1 cut(s) | 159 |
| BsgI | GTGCAG | 2 cut(s) | 164, 344 |
| Bsh1236I | CGCG | 2 cut(s) | 747, 1086 |
| BshFI | GGCC | 3 cut(s) | 124, 584, 765 |
| BsiHKAI | GWGCWC | 2 cut(s) | 753, 943 |
| BsiSI | CCGG | 3 cut(s) | 507, 585, 1259 |
| BslFI | GGGAC | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 198, 240, 598, 922, 1037, 1445 |
| BsmAI | GTCTC | 2 cut(s) | 255, 1489 |
| BsmFI | GGGAC | 1 cut(s) | 142 |
| BsnI | GGCC | 3 cut(s) | 124, 584, 765 |
| Bso31I | GGTCTC | 1 cut(s) | 1489 |
| Bsp119I | TTCGAA | 1 cut(s) | 1139 |
| Bsp1286I | GDGCHC | 2 cut(s) | 753, 943 |
| Bsp143I | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| BspACI | CCGC | 5 cut(s) | 125, 276, 905, 1003, 1075 |
| BspANI | GGCC | 3 cut(s) | 124, 584, 765 |
| BspCNI | CTCAG | 2 cut(s) | 765, 998 |
| BspFNI | CGCG | 2 cut(s) | 747, 1086 |
| BspLI | GGNNCC | 3 cut(s) | 175, 590, 1263 |
| BspMAI | CTGCAG | 1 cut(s) | 260 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 3 cut(s) | 168, 181, 235 |
| BspT104I | TTCGAA | 1 cut(s) | 1139 |
| BspTNI | GGTCTC | 1 cut(s) | 1489 |
| BsrBI | CCGCTC | 2 cut(s) | 1003, 1075 |
| BsrI | ACTGG | 3 cut(s) | 73, 556, 1334 |
| BssECI | CCNNGG | 1 cut(s) | 488 |
| BssMI | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| Bst2UI | CCWGG | 2 cut(s) | 129, 489 |
| Bst4CI | ACNGT | 2 cut(s) | 482, 598 |
| Bst6I | CTCTTC | 1 cut(s) | 1164 |
| BstBI | TTCGAA | 1 cut(s) | 1139 |
| BstC8I | GCNNGC | 4 cut(s) | 70, 286, 749, 1032 |
| BstDEI | CTNAG | 5 cut(s) | 752, 972, 985, 1115, 1358 |
| BstF5I | GGATG | 9 cut(s) | 159, 277, 310, 394, 418, 875, 982, 1300, 1314 |
| BstFNI | CGCG | 2 cut(s) | 747, 1086 |
| BstHHI | GCGC | 1 cut(s) | 1086 |
| BstKTI | GATC | 5 cut(s) | 176, 230, 566, 1192, 1206 |
| BstMAI | GTCTC | 2 cut(s) | 255, 1489 |
| BstMBI | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 361, 581, 1081, 1090, 1118 |
| BstNI | CCWGG | 2 cut(s) | 129, 489 |
| BstNSI | RCATGY | 2 cut(s) | 72, 375 |
| BstSCI | CCNGG | 3 cut(s) | 127, 487, 584 |
| BstSFI | CTRYAG | 1 cut(s) | 256 |
| BstUI | CGCG | 2 cut(s) | 747, 1086 |
| BstV1I | GCAGC | 2 cut(s) | 157, 954 |
| BstV2I | GAAGAC | 1 cut(s) | 36 |
| BstX2I | RGATCY | 2 cut(s) | 173, 227 |
| BstYI | RGATCY | 2 cut(s) | 173, 227 |
| Bsu36I | CCTNAGG | 1 cut(s) | 972 |
| BsuRI | GGCC | 3 cut(s) | 124, 584, 765 |
| BtsCI | GGATG | 9 cut(s) | 159, 277, 310, 394, 418, 875, 982, 1300, 1314 |
| BtsI | GCAGTG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 5 cut(s) | 253, 487, 603, 943, 1185 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 4 cut(s) | 70, 286, 749, 1032 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1340 |
| CfoI | GCGC | 1 cut(s) | 1086 |
| Cfr13I | GGNCC | 2 cut(s) | 485, 764 |
| CseI | GACGC | 1 cut(s) | 753 |
| Csp6I | GTAC | 5 cut(s) | 53, 60, 499, 608, 858 |
| CviAII | CATG | 6 cut(s) | 40, 69, 372, 1061, 1213, 1289 |
| CviQI | GTAC | 5 cut(s) | 53, 60, 499, 608, 858 |
| DdeI | CTNAG | 5 cut(s) | 752, 972, 985, 1115, 1358 |
| DpnI | GATC | 5 cut(s) | 175, 229, 565, 1191, 1205 |
| DpnII | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| DraIII | CACNNNGTG | 1 cut(s) | 482 |
| EaeI | YGGCCR | 1 cut(s) | 582 |
| Eam1104I | CTCTTC | 1 cut(s) | 1164 |
| EarI | CTCTTC | 1 cut(s) | 1164 |
| EciI | GGCGGA | 1 cut(s) | 291 |
| Ecl136II | GAGCTC | 1 cut(s) | 751 |
| Eco24I | GRGCYC | 1 cut(s) | 753 |
| Eco31I | GGTCTC | 1 cut(s) | 1489 |
| Eco47I | GGWCC | 1 cut(s) | 485 |
| Eco53kI | GAGCTC | 1 cut(s) | 751 |
| Eco57I | CTGAAG | 2 cut(s) | 84, 1362 |
| Eco81I | CCTNAGG | 1 cut(s) | 972 |
| EcoICRI | GAGCTC | 1 cut(s) | 751 |
| EcoRI | GAATTC | 1 cut(s) | 292 |
| EcoRII | CCWGG | 2 cut(s) | 127, 487 |
| EcoT22I | ATGCAT | 1 cut(s) | 463 |
| EcoT38I | GRGCYC | 1 cut(s) | 753 |
| FaeI | CATG | 6 cut(s) | 43, 72, 375, 1064, 1216, 1292 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 882, 914, 1143, 1175 |
| FaqI | GGGAC | 1 cut(s) | 142 |
| FatI | CATG | 6 cut(s) | 39, 68, 371, 1060, 1212, 1288 |
| Fnu4HI | GCNGC | 4 cut(s) | 125, 146, 968, 1076 |
| FokI | GGATG | 9 cut(s) | 166, 284, 317, 401, 425, 882, 989, 1307, 1321 |
| FriOI | GRGCYC | 1 cut(s) | 753 |
| Fsp4HI | GCNGC | 4 cut(s) | 125, 146, 968, 1076 |
| FspBI | CTAG | 5 cut(s) | 56, 297, 402, 671, 705 |
| GlaI | GCGC | 1 cut(s) | 1085 |
| GluI | GCNGC | 4 cut(s) | 125, 146, 968, 1076 |
| GsaI | CCCAGC | 1 cut(s) | 163 |
| GsuI | CTGGAG | 2 cut(s) | 813, 1178 |
| HaeIII | GGCC | 3 cut(s) | 124, 584, 765 |
| HapII | CCGG | 3 cut(s) | 507, 585, 1259 |
| HgaI | GACGC | 1 cut(s) | 753 |
| HhaI | GCGC | 1 cut(s) | 1086 |
| Hin1II | CATG | 6 cut(s) | 43, 72, 375, 1064, 1216, 1292 |
| Hin6I | GCGC | 1 cut(s) | 1084 |
| HinP1I | GCGC | 1 cut(s) | 1084 |
| HincII | GTYRAC | 1 cut(s) | 108 |
| HindII | GTYRAC | 1 cut(s) | 108 |
| HindIII | AAGCTT | 1 cut(s) | 1091 |
| HpaII | CCGG | 3 cut(s) | 507, 585, 1259 |
| HphI | GGTGA | 7 cut(s) | 31, 257, 352, 710, 1178, 1322, 1463 |
| Hpy166II | GTNNAC | 2 cut(s) | 108, 545 |
| Hpy188I | TCNGA | 5 cut(s) | 97, 424, 529, 686, 1342 |
| Hpy188III | TCNNGA | 9 cut(s) | 79, 561, 621, 656, 830, 1195, 1265, 1280, 1382 |
| Hpy8I | GTNNAC | 2 cut(s) | 108, 545 |
| HpyCH4III | ACNGT | 2 cut(s) | 482, 598 |
| HpyCH4V | TGCA | 7 cut(s) | 145, 258, 284, 325, 461, 1112, 1298 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 361, 581, 1081, 1090, 1118 |
| HpyF3I | CTNAG | 5 cut(s) | 752, 972, 985, 1115, 1358 |
| Hsp92II | CATG | 6 cut(s) | 43, 72, 375, 1064, 1216, 1292 |
| HspAI | GCGC | 1 cut(s) | 1084 |
| Kzo9I | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| LmnI | GCTCC | 3 cut(s) | 369, 946, 964 |
| Lsp1109I | GCAGC | 2 cut(s) | 157, 954 |
| LweI | GCATC | 3 cut(s) | 1159, 1285, 1444 |
| MaeI | CTAG | 5 cut(s) | 56, 297, 402, 671, 705 |
| MalI | GATC | 5 cut(s) | 175, 229, 565, 1191, 1205 |
| MbiI | CCGCTC | 2 cut(s) | 1003, 1075 |
| MboI | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| MfeI | CAATTG | 2 cut(s) | 178, 908 |
| MflI | RGATCY | 2 cut(s) | 173, 227 |
| MhlI | GDGCHC | 2 cut(s) | 753, 943 |
| MlyI | GAGTC | 5 cut(s) | 56, 503, 842, 989, 1394 |
| MmeI | TCCRAC | 2 cut(s) | 390, 1463 |
| Mph1103I | ATGCAT | 1 cut(s) | 463 |
| MseI | TTAA | 2 cut(s) | 1095, 1466 |
| MslI | CAYNNNNRTG | 2 cut(s) | 449, 1293 |
| MspI | CCGG | 3 cut(s) | 507, 585, 1259 |
| MspR9I | CCNGG | 3 cut(s) | 129, 489, 586 |
| MunI | CAATTG | 2 cut(s) | 178, 908 |
| MvaI | CCWGG | 2 cut(s) | 129, 489 |
| MvnI | CGCG | 2 cut(s) | 747, 1086 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 361, 581, 1081, 1090, 1118 |
| NciI | CCSGG | 1 cut(s) | 586 |
| NdeII | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| NlaIII | CATG | 6 cut(s) | 43, 72, 375, 1064, 1216, 1292 |
| NlaIV | GGNNCC | 3 cut(s) | 175, 590, 1263 |
| NmeAIII | GCCGAG | 1 cut(s) | 1483 |
| NsiI | ATGCAT | 1 cut(s) | 463 |
| NspI | RCATGY | 2 cut(s) | 72, 375 |
| NspV | TTCGAA | 1 cut(s) | 1139 |
| PaeI | GCATGC | 1 cut(s) | 72 |
| PciI | ACATGT | 1 cut(s) | 371 |
| PfeI | GAWTC | 6 cut(s) | 473, 667, 701, 815, 1057, 1325 |
| PflFI | GACNNNGTC | 1 cut(s) | 35 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 198, 598, 922 |
| PkrI | GCNGC | 4 cut(s) | 126, 147, 969, 1077 |
| PleI | GAGTC | 5 cut(s) | 55, 502, 841, 988, 1393 |
| PpsI | GAGTC | 5 cut(s) | 55, 502, 841, 988, 1393 |
| PscI | ACATGT | 1 cut(s) | 371 |
| Psp124BI | GAGCTC | 1 cut(s) | 753 |
| Psp6I | CCWGG | 2 cut(s) | 127, 487 |
| PspFI | CCCAGC | 1 cut(s) | 159 |
| PspGI | CCWGG | 2 cut(s) | 127, 487 |
| PspN4I | GGNNCC | 3 cut(s) | 175, 590, 1263 |
| PspPI | GGNCC | 2 cut(s) | 485, 764 |
| PstI | CTGCAG | 1 cut(s) | 260 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1340 |
| PsuI | RGATCY | 2 cut(s) | 173, 227 |
| PsyI | GACNNNGTC | 1 cut(s) | 35 |
| RsaI | GTAC | 5 cut(s) | 54, 61, 500, 609, 859 |
| RsaNI | GTAC | 5 cut(s) | 53, 60, 499, 608, 858 |
| RseI | CAYNNNNRTG | 2 cut(s) | 449, 1293 |
| SacI | GAGCTC | 1 cut(s) | 753 |
| SaqAI | TTAA | 2 cut(s) | 1095, 1466 |
| SatI | GCNGC | 4 cut(s) | 125, 146, 968, 1076 |
| Sau3AI | GATC | 5 cut(s) | 173, 227, 563, 1189, 1203 |
| Sau96I | GGNCC | 2 cut(s) | 485, 764 |
| ScaI | AGTACT | 1 cut(s) | 54 |
| SchI | GAGTC | 5 cut(s) | 56, 503, 842, 989, 1394 |
| ScrFI | CCNGG | 3 cut(s) | 129, 489, 586 |
| SduI | GDGCHC | 2 cut(s) | 753, 943 |
| SfaNI | GCATC | 3 cut(s) | 1159, 1285, 1444 |
| SfcI | CTRYAG | 1 cut(s) | 256 |
| SfuI | TTCGAA | 1 cut(s) | 1139 |
| SinI | GGWCC | 1 cut(s) | 485 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 449, 1293 |
| SmlI | CTYRAG | 3 cut(s) | 356, 1380, 1443 |
| SmoI | CTYRAG | 3 cut(s) | 356, 1380, 1443 |
| SphI | GCATGC | 1 cut(s) | 72 |
| SsiI | CCGC | 5 cut(s) | 125, 276, 905, 1003, 1075 |
| SspI | AATATT | 1 cut(s) | 787 |
| SspMI | CTAG | 5 cut(s) | 56, 297, 402, 671, 705 |
| SstI | GAGCTC | 1 cut(s) | 753 |
| StyD4I | CCNGG | 3 cut(s) | 127, 487, 584 |
| TaaI | ACNGT | 2 cut(s) | 482, 598 |
| TaqI | TCGA | 2 cut(s) | 215, 1139 |
| TatI | WGTACW | 1 cut(s) | 52 |
| TauI | GCSGC | 2 cut(s) | 127, 1078 |
| TfiI | GAWTC | 6 cut(s) | 473, 667, 701, 815, 1057, 1325 |
| Tru1I | TTAA | 2 cut(s) | 1095, 1466 |
| Tru9I | TTAA | 2 cut(s) | 1095, 1466 |
| TscAI | CASTG | 5 cut(s) | 260, 487, 603, 943, 1192 |
| TseI | GCWGC | 2 cut(s) | 145, 967 |
| TspDTI | ATGAA | 5 cut(s) | 39, 629, 1214, 1325, 1412 |
| TspRI | CASTG | 5 cut(s) | 260, 487, 603, 943, 1192 |
| Tth111I | GACNNNGTC | 1 cut(s) | 35 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 198, 598, 922 |
| VpaK11BI | GGWCC | 1 cut(s) | 485 |
| XapI | RAATTY | 3 cut(s) | 11, 292, 688 |
| XceI | RCATGY | 2 cut(s) | 72, 375 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 374, 923 |
| XspI | CTAG | 5 cut(s) | 56, 297, 402, 671, 705 |
| ZrmI | AGTACT | 1 cut(s) | 54 |
| Zsp2I | ATGCAT | 1 cut(s) | 463 |