Transcription factor bHLH3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16430 |
| fragaria_vesca | FvH4_2g22150 FvH4_2g22150 |
| malus_domestica | MD05G1202500.v1.1 MD05G1202900.v1.1 MD10G1190000.v1.1 |
| prunus_persica | Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 Prupe.8G228700_v2.0.a1 |
| pyrus_communis | pycom05g18900 pycom05g18950 pycom10g16360 pycom10g16370 |
| rosa_chinensis | RchiOBHm_Chr6g0288981 |
| rosa_laevigata | RLG00000012333 RLG00000013932 |
| rosa_multiflora | Rmu_sc0000666.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00179620 |
| rosa_rugosa | Rorug06G0199900 |
| rosa_samantha | Rh6AG311600 Rh6BG318100 Rh6CG325000 Rh6DG310800 |
| rosa_wichuraiana | Rw6G013790 Rw6G026880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1353 |
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccB1I | GGYRCC | 1 cut(s) | 59 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 604 |
| AccBSI | CCGCTC | 1 cut(s) | 1081 |
| AccIII | TCCGGA | 1 cut(s) | 661 |
| AciI | CCGC | 3 cut(s) | 911, 1081, 1108 |
| AclWI | GGATC | 1 cut(s) | 426 |
| AcsI | RAATTY | 2 cut(s) | 467, 937 |
| AcuI | CTGAAG | 1 cut(s) | 819 |
| AcyI | GRCGYC | 1 cut(s) | 1350 |
| AfaI | GTAC | 4 cut(s) | 54, 461, 506, 615 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 198, 240, 604, 1043 |
| AjnI | CCWGG | 3 cut(s) | 72, 493, 1284 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 92, 124, 928, 960 |
| Alw26I | GTCTC | 4 cut(s) | 255, 279, 767, 809 |
| AlwI | GGATC | 1 cut(s) | 426 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 154 |
| Aor13HI | TCCGGA | 1 cut(s) | 661 |
| AoxI | GGCC | 1 cut(s) | 122 |
| ApeKI | GCWGC | 5 cut(s) | 145, 227, 230, 973, 1248 |
| ApoI | RAATTY | 2 cut(s) | 467, 937 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 808, 840 |
| AseI | ATTAAT | 1 cut(s) | 789 |
| AspS9I | GGNCC | 3 cut(s) | 174, 491, 770 |
| AsuC2I | CCSGG | 3 cut(s) | 129, 1265, 1340 |
| AsuHPI | GGTGA | 8 cut(s) | 17, 31, 355, 404, 474, 1184, 1328, 1469 |
| AvaII | GGWCC | 3 cut(s) | 174, 491, 770 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1383, 1416 |
| BanI | GGYRCC | 1 cut(s) | 59 |
| BbsI | GAAGAC | 1 cut(s) | 187 |
| BbvI | GCAGC | 5 cut(s) | 157, 217, 239, 960, 1260 |
| BccI | CCATC | 3 cut(s) | 242, 1144, 1231 |
| BceAI | ACGGC | 2 cut(s) | 176, 1307 |
| BciT130I | CCWGG | 3 cut(s) | 74, 495, 1286 |
| BcnI | CCSGG | 3 cut(s) | 129, 1265, 1340 |
| BcoDI | GTCTC | 4 cut(s) | 255, 279, 767, 809 |
| BfaI | CTAG | 7 cut(s) | 56, 120, 297, 543, 582, 711, 1017 |
| BfmI | CTRYAG | 1 cut(s) | 948 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BisI | GCNGC | 6 cut(s) | 146, 228, 231, 974, 1082, 1249 |
| BlsI | GCNGC | 6 cut(s) | 147, 229, 232, 975, 1083, 1250 |
| BmcAI | AGTACT | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 6 cut(s) | 74, 129, 495, 1265, 1286, 1340 |
| Bme18I | GGWCC | 3 cut(s) | 174, 491, 770 |
| BmgT120I | GGNCC | 3 cut(s) | 174, 491, 770 |
| BmiI | GGNNCC | 4 cut(s) | 61, 175, 596, 1269 |
| BmrFI | CCNGG | 6 cut(s) | 74, 129, 495, 1265, 1286, 1340 |
| BmsI | GCATC | 4 cut(s) | 1165, 1291, 1450, 1499 |
| BpiI | GAAGAC | 1 cut(s) | 187 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 806, 838 |
| BpmI | CTGGAG | 1 cut(s) | 1184 |
| BpuEI | CTTGAG | 4 cut(s) | 937, 1349, 1371, 1434 |
| BpuMI | CCSGG | 3 cut(s) | 129, 1265, 1340 |
| BsaBI | GATNNNNATC | 2 cut(s) | 217, 1208 |
| BsaHI | GRCGYC | 1 cut(s) | 1350 |
| BsaJI | CCNNGG | 3 cut(s) | 169, 494, 1168 |
| BsaWI | WCCGGW | 1 cut(s) | 661 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 198, 240, 604, 1043 |
| Bse1I | ACTGG | 3 cut(s) | 177, 562, 1332 |
| Bse3DI | GCAATG | 1 cut(s) | 253 |
| Bse8I | GATNNNNATC | 2 cut(s) | 217, 1208 |
| BseAI | TCCGGA | 1 cut(s) | 661 |
| BseBI | CCWGG | 3 cut(s) | 74, 495, 1286 |
| BseDI | CCNNGG | 3 cut(s) | 169, 494, 1168 |
| BseGI | GGATG | 5 cut(s) | 688, 881, 1306, 1320, 1505 |
| BseJI | GATNNNNATC | 2 cut(s) | 217, 1208 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 198, 240, 604, 1043 |
| BseMI | GCAATG | 1 cut(s) | 253 |
| BseMII | CTCAG | 2 cut(s) | 876, 1218 |
| BseNI | ACTGG | 3 cut(s) | 177, 562, 1332 |
| BseRI | GAGGAG | 1 cut(s) | 424 |
| BseXI | GCAGC | 5 cut(s) | 157, 217, 239, 960, 1260 |
| BseYI | CCCAGC | 1 cut(s) | 159 |
| BsgI | GTGCAG | 3 cut(s) | 164, 246, 344 |
| BshFI | GGCC | 1 cut(s) | 124 |
| BshNI | GGYRCC | 1 cut(s) | 59 |
| BsiSI | CCGG | 4 cut(s) | 128, 662, 1265, 1340 |
| BslFI | GGGAC | 2 cut(s) | 142, 144 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 198, 240, 604, 1043 |
| BsmAI | GTCTC | 4 cut(s) | 255, 279, 767, 809 |
| BsmBI | CGTCTC | 1 cut(s) | 279 |
| BsmFI | GGGAC | 2 cut(s) | 142, 144 |
| BsnI | GGCC | 1 cut(s) | 124 |
| Bsp13I | TCCGGA | 1 cut(s) | 661 |
| Bsp143I | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| BspACI | CCGC | 3 cut(s) | 911, 1081, 1108 |
| BspANI | GGCC | 1 cut(s) | 124 |
| BspCNI | CTCAG | 2 cut(s) | 877, 1219 |
| BspEI | TCCGGA | 1 cut(s) | 661 |
| BspLI | GGNNCC | 4 cut(s) | 61, 175, 596, 1269 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BspT107I | GGYRCC | 1 cut(s) | 59 |
| BsrBI | CCGCTC | 1 cut(s) | 1081 |
| BsrDI | GCAATG | 1 cut(s) | 253 |
| BsrI | ACTGG | 3 cut(s) | 177, 562, 1332 |
| BssECI | CCNNGG | 3 cut(s) | 169, 494, 1168 |
| BssMI | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| BssNI | GRCGYC | 1 cut(s) | 1350 |
| BssT1I | CCWWGG | 2 cut(s) | 169, 1168 |
| Bst2UI | CCWGG | 3 cut(s) | 74, 495, 1286 |
| Bst4CI | ACNGT | 4 cut(s) | 486, 604, 906, 1423 |
| Bst6I | CTCTTC | 2 cut(s) | 829, 1042 |
| BstACI | GRCGYC | 1 cut(s) | 1350 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 1038 |
| BstDEI | CTNAG | 4 cut(s) | 758, 885, 1121, 1227 |
| BstF5I | GGATG | 5 cut(s) | 688, 881, 1306, 1320, 1505 |
| BstKTI | GATC | 4 cut(s) | 84, 421, 1198, 1212 |
| BstMAI | GTCTC | 4 cut(s) | 255, 279, 767, 809 |
| BstMBI | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 151, 160, 264, 364, 587, 1087, 1096, 1105, 1124 |
| BstNI | CCWGG | 3 cut(s) | 74, 495, 1286 |
| BstSCI | CCNGG | 6 cut(s) | 72, 127, 493, 1263, 1284, 1338 |
| BstSFI | CTRYAG | 1 cut(s) | 948 |
| BstV1I | GCAGC | 5 cut(s) | 157, 217, 239, 960, 1260 |
| BstV2I | GAAGAC | 1 cut(s) | 187 |
| BsuRI | GGCC | 1 cut(s) | 124 |
| BtgZI | GCGATG | 1 cut(s) | 261 |
| BtsCI | GGATG | 5 cut(s) | 688, 881, 1306, 1320, 1505 |
| BtsIMutI | CAGTG | 2 cut(s) | 609, 1325 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 1038 |
| CaiI | CAGNNNCTG | 1 cut(s) | 154 |
| Cfr13I | GGNCC | 3 cut(s) | 174, 491, 770 |
| Csp6I | GTAC | 4 cut(s) | 53, 460, 505, 614 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 256, 291 |
| CviAII | CATG | 6 cut(s) | 375, 752, 1067, 1219, 1295, 1510 |
| CviQI | GTAC | 4 cut(s) | 53, 460, 505, 614 |
| DdeI | CTNAG | 4 cut(s) | 758, 885, 1121, 1227 |
| DpnI | GATC | 4 cut(s) | 83, 420, 1197, 1211 |
| DpnII | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| DraI | TTTAAA | 1 cut(s) | 466 |
| Eam1104I | CTCTTC | 2 cut(s) | 829, 1042 |
| EarI | CTCTTC | 2 cut(s) | 829, 1042 |
| Eco130I | CCWWGG | 2 cut(s) | 169, 1168 |
| Eco147I | AGGCCT | 1 cut(s) | 124 |
| Eco47I | GGWCC | 3 cut(s) | 174, 491, 770 |
| Eco57I | CTGAAG | 1 cut(s) | 819 |
| EcoRII | CCWGG | 3 cut(s) | 72, 493, 1284 |
| EcoT14I | CCWWGG | 2 cut(s) | 169, 1168 |
| ErhI | CCWWGG | 2 cut(s) | 169, 1168 |
| Esp3I | CGTCTC | 1 cut(s) | 279 |
| FaeI | CATG | 6 cut(s) | 378, 755, 1070, 1222, 1298, 1513 |
| FaqI | GGGAC | 2 cut(s) | 142, 144 |
| FatI | CATG | 6 cut(s) | 374, 751, 1066, 1218, 1294, 1509 |
| Fnu4HI | GCNGC | 6 cut(s) | 146, 228, 231, 974, 1082, 1249 |
| FokI | GGATG | 5 cut(s) | 695, 888, 1313, 1327, 1492 |
| Fsp4HI | GCNGC | 6 cut(s) | 146, 228, 231, 974, 1082, 1249 |
| FspBI | CTAG | 7 cut(s) | 56, 120, 297, 543, 582, 711, 1017 |
| GluI | GCNGC | 6 cut(s) | 146, 228, 231, 974, 1082, 1249 |
| GsaI | CCCAGC | 1 cut(s) | 163 |
| GsuI | CTGGAG | 1 cut(s) | 1184 |
| HaeIII | GGCC | 1 cut(s) | 124 |
| HapII | CCGG | 4 cut(s) | 128, 662, 1265, 1340 |
| Hin1I | GRCGYC | 1 cut(s) | 1350 |
| Hin1II | CATG | 6 cut(s) | 378, 755, 1070, 1222, 1298, 1513 |
| HindIII | AAGCTT | 2 cut(s) | 11, 1097 |
| HinfI | GANTC | 9 cut(s) | 47, 479, 500, 707, 821, 839, 986, 1063, 1331 |
| HpaII | CCGG | 4 cut(s) | 128, 662, 1265, 1340 |
| HphI | GGTGA | 8 cut(s) | 17, 31, 355, 404, 474, 1184, 1328, 1469 |
| Hpy188I | TCNGA | 8 cut(s) | 97, 112, 430, 692, 838, 970, 1348, 1358 |
| Hpy188III | TCNNGA | 6 cut(s) | 567, 627, 662, 1201, 1271, 1388 |
| HpyAV | CCTTC | 1 cut(s) | 843 |
| HpyCH4III | ACNGT | 4 cut(s) | 486, 604, 906, 1423 |
| HpyCH4IV | ACGT | 1 cut(s) | 1350 |
| HpyCH4V | TGCA | 6 cut(s) | 145, 227, 258, 325, 1118, 1258 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 151, 160, 264, 364, 587, 1087, 1096, 1105, 1124 |
| HpyF3I | CTNAG | 4 cut(s) | 758, 885, 1121, 1227 |
| HpySE526I | ACGT | 1 cut(s) | 1350 |
| Hsp92I | GRCGYC | 1 cut(s) | 1350 |
| Hsp92II | CATG | 6 cut(s) | 378, 755, 1070, 1222, 1298, 1513 |
| Kpn2I | TCCGGA | 1 cut(s) | 661 |
| Kzo9I | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| LmnI | GCTCC | 2 cut(s) | 372, 637 |
| Lsp1109I | GCAGC | 5 cut(s) | 157, 217, 239, 960, 1260 |
| LweI | GCATC | 4 cut(s) | 1165, 1291, 1450, 1499 |
| MaeI | CTAG | 7 cut(s) | 56, 120, 297, 543, 582, 711, 1017 |
| MaeII | ACGT | 1 cut(s) | 1350 |
| MaeIII | GTNAC | 1 cut(s) | 1405 |
| MalI | GATC | 4 cut(s) | 83, 420, 1197, 1211 |
| MbiI | CCGCTC | 1 cut(s) | 1081 |
| MboI | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| MfeI | CAATTG | 1 cut(s) | 134 |
| MluCI | AATT | 7 cut(s) | 134, 467, 522, 657, 924, 937, 999 |
| MlyI | GAGTC | 4 cut(s) | 56, 509, 815, 995 |
| MmeI | TCCRAC | 3 cut(s) | 135, 262, 396 |
| MroI | TCCGGA | 1 cut(s) | 661 |
| MseI | TTAA | 5 cut(s) | 465, 789, 900, 1101, 1472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1299 |
| MspA1I | CMGCKG | 3 cut(s) | 230, 953, 1108 |
| MspI | CCGG | 4 cut(s) | 128, 662, 1265, 1340 |
| MspR9I | CCNGG | 6 cut(s) | 74, 129, 495, 1265, 1286, 1340 |
| MunI | CAATTG | 1 cut(s) | 134 |
| MvaI | CCWGG | 3 cut(s) | 74, 495, 1286 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 151, 160, 264, 364, 587, 1087, 1096, 1105, 1124 |
| NciI | CCSGG | 3 cut(s) | 129, 1265, 1340 |
| NdeII | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| NlaIII | CATG | 6 cut(s) | 378, 755, 1070, 1222, 1298, 1513 |
| NlaIV | GGNNCC | 4 cut(s) | 61, 175, 596, 1269 |
| NmeAIII | GCCGAG | 1 cut(s) | 1489 |
| PceI | AGGCCT | 1 cut(s) | 124 |
| PfeI | GAWTC | 5 cut(s) | 479, 707, 839, 1063, 1331 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 604 |
| PfoI | TCCNGGA | 2 cut(s) | 127, 1284 |
| PkrI | GCNGC | 6 cut(s) | 147, 229, 232, 975, 1083, 1250 |
| PleI | GAGTC | 4 cut(s) | 55, 508, 815, 994 |
| PpsI | GAGTC | 4 cut(s) | 55, 508, 815, 994 |
| PshBI | ATTAAT | 1 cut(s) | 789 |
| Psp6I | CCWGG | 3 cut(s) | 72, 493, 1284 |
| PspFI | CCCAGC | 1 cut(s) | 159 |
| PspGI | CCWGG | 3 cut(s) | 72, 493, 1284 |
| PspN4I | GGNNCC | 4 cut(s) | 61, 175, 596, 1269 |
| PspPI | GGNCC | 3 cut(s) | 174, 491, 770 |
| PstNI | CAGNNNCTG | 1 cut(s) | 154 |
| PvuII | CAGCTG | 2 cut(s) | 230, 953 |
| RsaI | GTAC | 4 cut(s) | 54, 461, 506, 615 |
| RsaNI | GTAC | 4 cut(s) | 53, 460, 505, 614 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1299 |
| SaqAI | TTAA | 5 cut(s) | 465, 789, 900, 1101, 1472 |
| SatI | GCNGC | 6 cut(s) | 146, 228, 231, 974, 1082, 1249 |
| Sau3AI | GATC | 4 cut(s) | 81, 418, 1195, 1209 |
| Sau96I | GGNCC | 3 cut(s) | 174, 491, 770 |
| ScaI | AGTACT | 1 cut(s) | 54 |
| SchI | GAGTC | 4 cut(s) | 56, 509, 815, 995 |
| ScrFI | CCNGG | 6 cut(s) | 74, 129, 495, 1265, 1286, 1340 |
| SfaNI | GCATC | 4 cut(s) | 1165, 1291, 1450, 1499 |
| SfcI | CTRYAG | 1 cut(s) | 948 |
| SinI | GGWCC | 3 cut(s) | 174, 491, 770 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1299 |
| SmlI | CTYRAG | 4 cut(s) | 916, 1364, 1386, 1449 |
| SmoI | CTYRAG | 4 cut(s) | 916, 1364, 1386, 1449 |
| Sse9I | AATT | 7 cut(s) | 134, 467, 522, 657, 924, 937, 999 |
| SseBI | AGGCCT | 1 cut(s) | 124 |
| SsiI | CCGC | 3 cut(s) | 911, 1081, 1108 |
| SspI | AATATT | 2 cut(s) | 676, 793 |
| SspMI | CTAG | 7 cut(s) | 56, 120, 297, 543, 582, 711, 1017 |
| StuI | AGGCCT | 1 cut(s) | 124 |
| StyD4I | CCNGG | 6 cut(s) | 72, 127, 493, 1263, 1284, 1338 |
| StyI | CCWWGG | 2 cut(s) | 169, 1168 |
| TaaI | ACNGT | 4 cut(s) | 486, 604, 906, 1423 |
| TaiI | ACGT | 1 cut(s) | 1353 |
| TaqI | TCGA | 2 cut(s) | 880, 1145 |
| TasI | AATT | 7 cut(s) | 134, 467, 522, 657, 924, 937, 999 |
| TatI | WGTACW | 2 cut(s) | 52, 459 |
| TauI | GCSGC | 1 cut(s) | 1084 |
| TfiI | GAWTC | 5 cut(s) | 479, 707, 839, 1063, 1331 |
| Tru1I | TTAA | 5 cut(s) | 465, 789, 900, 1101, 1472 |
| Tru9I | TTAA | 5 cut(s) | 465, 789, 900, 1101, 1472 |
| TscAI | CASTG | 2 cut(s) | 609, 1332 |
| TseI | GCWGC | 5 cut(s) | 145, 227, 230, 973, 1248 |
| TspDTI | ATGAA | 8 cut(s) | 39, 635, 909, 1020, 1220, 1331, 1418, 1433 |
| TspGWI | ACGGA | 2 cut(s) | 888, 1393 |
| TspRI | CASTG | 2 cut(s) | 609, 1332 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 604 |
| VpaK11BI | GGWCC | 3 cut(s) | 174, 491, 770 |
| VspI | ATTAAT | 1 cut(s) | 789 |
| XapI | RAATTY | 2 cut(s) | 467, 937 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 929 |
| XspI | CTAG | 7 cut(s) | 56, 120, 297, 543, 582, 711, 1017 |
| ZraI | GACGTC | 1 cut(s) | 1351 |
| ZrmI | AGTACT | 1 cut(s) | 54 |