Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

30341012 .. 30343469

Gene Structure 2458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1204400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGTCTTCCCTTCACGTTTCCCCAAACACCATTTCCCAGCCTCTCAATCTCCGCCGTCGATGCATTCCCAATTTAGGCAGAGAAGTCCGACTAATCAACGGCCGGAGGCCGTCCGCGGCTTGCCTCAGCGTGGACGTGGAAGCACCGGATACCGCCTCCAAATTAGGGCTTTTGAAGAGCAAGGAGGTAATGGAGACGGAGGCGAAGGTCCTGCTGCAGACCTACGCGAGGACTCCAGTGGTGCTCACCAGTGGCAAAGGTTGTAAATTGTACGATACCGAGGGGCGCGAGTATTTGGACCTGAGCTCGGGGATTGCGGTGAACGCGCTCGGCCATGGCGACGAGGACTGGCTGAAGGCGGTGGTTGATCAGGCCGGAACCCTTACTCACGTCAGCAATCTCTACTATTCAATCCCGCAGGTGGAGCTAGCAAAGCGTCTGGTGGGTTCTAGTTTTGCAGACCGTGTGTTTTTCACTAATTCTGGAACCGAAGCGAACGAAGCAGCCATTAAGTTTGCAAGGAAGTTTCAGAGACATACTCACCCTGATGCGAAAGAGCCTGCCACGGGCTTCATATCTTTCACAAACAGCTTCCATGGGAGGACCATGGGTGCTCTTGCCTTGACTAGCAAAGAGCATTACCGGTCTCCTTTTGAACCTGTTATGCCTGGAGTCACGTTTGTGGAGTATGGAAATATACAAGCTACCAAAGAACTGATTCAGCCCGGAAAGACTGCCGCTGTGTTCGTCGAACCTATTCAGGGTGAAGGCGGAATTTACAGTGCTTCAAAGGAGTTTCTCCAGTATCTGCGTACTGCATGTGATGATGCCGGTGCTCTTCTGGTGTTCGACGAGGTTCAATGTGGTTTAGGTCGAACTGGGTATCTCTGGGCTCATGAGGCTTACGGTGTGTTCCCAGATATAATGACACTTGCTAAGCCACTTGCTGGAGGCCTGCCCATTGGAGCTGCATTGATGACCGAAAGAGTGGCTTCAGCCATAGCTTTTGGTGACCATGGAAGTACTTTTGCTGGCGCACCTCTTATCTGTAGCGCAGCCTTAGCTGTTGTCGACAAAATATCCGATCCCAAATTTTTGAATAGCGTCTCTAAAAAAGGTATCTACTTCAAAAACATCTTAAAGCAGAAGCTGGGAGGGAACCCACATGTTCGGGAAATACGTGGTCTAGGGCTTATTATCGGAATTGAATTGGACGTCTCTGCCTCAGCCGTTGTGGATGCATGTCGAAACTCTGGCCTGTTAATATTGACTGCTGGAAAAGGTAATGTTGTGAGGCTGGTGCCTCCATTGATCATAACTGAGCAGGAGATTGATGTTGCAGCTGATATTCTGTCCCAAGCTTTGTCGGTACTTGATGAAACTAATTCAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

465

Amino Acids

49.76

Weight (kDa)

6.57

Isoelectric Point (pI)

34.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	77 - 455	3.2e-115	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	409
AatII	GACGTC	1 cut(s)	1218
Acc36I	ACCTGC	1 cut(s)	409
AccB1I	GGYRCC	1 cut(s)	1300
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccI	GTMKAC	1 cut(s)	1071
AccII	CGCG	4 cut(s)	116, 227, 288, 326
AciI	CCGC	9 cut(s)	52, 114, 116, 153, 317, 359, 416, 738, 771
AclWI	GGATC	1 cut(s)	1079
AcoI	YGGCCR	2 cut(s)	100, 331
AcsI	RAATTY	2 cut(s)	774, 1091
AcuI	CTGAAG	2 cut(s)	374, 978
AcyI	GRCGYC	1 cut(s)	1215
AfaI	GTAC	4 cut(s)	272, 814, 1024, 1371
AfiI	CCNNNNNNNGG	9 cut(s)	74, 130, 165, 228, 307, 421, 566, 761, 947
AflIII	ACRYGT	1 cut(s)	1165
AgeI	ACCGGT	1 cut(s)	642
AgsI	TTSAA	9 cut(s)	175, 411, 656, 789, 860, 1099, 1129, 1208, 1389
AjiI	CACGTC	2 cut(s)	136, 391
AjnI	CCWGG	1 cut(s)	667
AjuI	GAANNNNNNNTTGG	2 cut(s)	16, 48
AleI	CACNNNNGTG	1 cut(s)	680
Alw21I	GWGCWC	4 cut(s)	246, 308, 616, 838
Alw26I	GTCTC	5 cut(s)	188, 526, 651, 1111, 1222
AlwI	GGATC	1 cut(s)	1079
AlwNI	CAGNNNCTG	2 cut(s)	808, 1150
Ama87I	CYCGRG	1 cut(s)	307
AoxI	GGCC	6 cut(s)	100, 107, 331, 372, 952, 1255
ApeKI	GCWGC	5 cut(s)	214, 503, 968, 1055, 1340
ApoI	RAATTY	2 cut(s)	774, 1091
AsiGI	ACCGGT	1 cut(s)	642
Asp700I	GAANNNNTTC	2 cut(s)	717, 756
AspLEI	GCGC	4 cut(s)	288, 328, 1037, 1055
AspS9I	GGNCC	3 cut(s)	208, 298, 603
AsuC2I	CCSGG	1 cut(s)	726
AsuHPI	GGTGA	5 cut(s)	238, 331, 533, 776, 1022
AsuNHI	GCTAGC	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	307
AvaII	GGWCC	3 cut(s)	208, 298, 603
BanI	GGYRCC	1 cut(s)	1300
BanII	GRGCYC	2 cut(s)	308, 895
Bbv12I	GWGCWC	4 cut(s)	246, 308, 616, 838
BbvCI	CCTCAGC	2 cut(s)	125, 1225
BbvI	GCAGC	5 cut(s)	201, 515, 955, 1067, 1352
BceAI	ACGGC	4 cut(s)	39, 94, 115, 1214
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	1 cut(s)	669
BciVI	GTATCC	1 cut(s)	142
BclI	TGATCA	2 cut(s)	367, 1311
BcnI	CCSGG	1 cut(s)	726
BcoDI	GTCTC	5 cut(s)	188, 526, 651, 1111, 1222
BfaI	CTAG	4 cut(s)	428, 450, 627, 1187
BfmI	CTRYAG	2 cut(s)	215, 1048
BfuAI	ACCTGC	1 cut(s)	409
BfuI	GTATCC	1 cut(s)	142
BisI	GCNGC	7 cut(s)	117, 215, 504, 738, 969, 1056, 1341
BlpI	GCTNAGC	1 cut(s)	936
BlsI	GCNGC	7 cut(s)	118, 216, 505, 739, 970, 1057, 1342
BmcAI	AGTACT	1 cut(s)	1024
Bme1390I	CCNGG	2 cut(s)	669, 726
Bme18I	GGWCC	3 cut(s)	208, 298, 603
BmeT110I	CYCGRG	1 cut(s)	307
BmgBI	CACGTC	2 cut(s)	136, 391
BmgT120I	GGNCC	3 cut(s)	208, 298, 603
BmiI	GGNNCC	4 cut(s)	379, 487, 1160, 1302
BmrFI	CCNGG	2 cut(s)	669, 726
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	4 cut(s)	50, 538, 817, 1228
BmtI	GCTAGC	1 cut(s)	431
BmuI	ACTGGG	1 cut(s)	888
BplI	GAGNNNNNCTC	2 cut(s)	523, 555
BpmI	CTGGAG	4 cut(s)	219, 690, 785, 969
Bpu10I	CCTNAGC	4 cut(s)	125, 302, 1060, 1225
Bpu1102I	GCTNAGC	1 cut(s)	936
BpuMI	CCSGG	1 cut(s)	726
BsaAI	YACGTR	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	1215
BsaI	GGTCTC	1 cut(s)	651
BsaJI	CCNNGG	7 cut(s)	114, 279, 334, 564, 595, 606, 1015
BsaWI	WCCGGW	2 cut(s)	145, 642
Bsc4I	CCNNNNNNNGG	9 cut(s)	74, 130, 165, 228, 307, 421, 566, 761, 947
Bse118I	RCCGGY	2 cut(s)	642, 830
Bse1I	ACTGG	5 cut(s)	236, 249, 353, 802, 883
BseBI	CCWGG	1 cut(s)	669
BseDI	CCNNGG	7 cut(s)	114, 279, 334, 564, 595, 606, 1015
BseGI	GGATG	1 cut(s)	1243
BseLI	CCNNNNNNNGG	9 cut(s)	74, 130, 165, 228, 307, 421, 566, 761, 947
BseMII	CTCAG	4 cut(s)	139, 293, 1239, 1311
BseNI	ACTGG	5 cut(s)	236, 249, 353, 802, 883
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	5 cut(s)	201, 515, 955, 1067, 1352
BseYI	CCCAGC	2 cut(s)	36, 1150
Bsh1236I	CGCG	4 cut(s)	116, 227, 288, 326
Bsh1285I	CGRYCG	1 cut(s)	103
BshFI	GGCC	6 cut(s)	102, 109, 333, 374, 954, 1257
BshNI	GGYRCC	1 cut(s)	1300
BshTI	ACCGGT	1 cut(s)	642
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	4 cut(s)	246, 308, 616, 838
BsiHKCI	CYCGRG	1 cut(s)	307
BsiSI	CCGG	6 cut(s)	103, 146, 375, 643, 726, 831
BslFI	GGGAC	1 cut(s)	1339
BslI	CCNNNNNNNGG	9 cut(s)	74, 130, 165, 228, 307, 421, 566, 761, 947
BsmAI	GTCTC	5 cut(s)	188, 526, 651, 1111, 1222
BsmBI	CGTCTC	3 cut(s)	188, 1111, 1222
BsmFI	GGGAC	1 cut(s)	1339
BsmI	GAATGC	1 cut(s)	63
BsnI	GGCC	6 cut(s)	102, 109, 333, 374, 954, 1257
Bso31I	GGTCTC	1 cut(s)	651
BsoBI	CYCGRG	1 cut(s)	307
Bsp1286I	GDGCHC	5 cut(s)	246, 308, 616, 838, 895
Bsp143I	GATC	3 cut(s)	367, 1084, 1311
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	4 cut(s)	334, 595, 606, 1015
BspACI	CCGC	9 cut(s)	52, 114, 116, 153, 317, 359, 416, 738, 771
BspANI	GGCC	6 cut(s)	102, 109, 333, 374, 954, 1257
BspCNI	CTCAG	4 cut(s)	138, 294, 1238, 1312
BspFNI	CGCG	4 cut(s)	116, 227, 288, 326
BspHI	TCATGA	1 cut(s)	895
BspLI	GGNNCC	4 cut(s)	379, 487, 1160, 1302
BspMAI	CTGCAG	1 cut(s)	219
BspMI	ACCTGC	1 cut(s)	409
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	1 cut(s)	1079
BspQI	GCTCTTC	2 cut(s)	170, 843
BspT107I	GGYRCC	1 cut(s)	1300
BspTNI	GGTCTC	1 cut(s)	651
BsrFI	RCCGGY	2 cut(s)	642, 830
BsrI	ACTGG	5 cut(s)	236, 249, 353, 802, 883
BssAI	RCCGGY	2 cut(s)	642, 830
BssECI	CCNNGG	7 cut(s)	114, 279, 334, 564, 595, 606, 1015
BssMI	GATC	3 cut(s)	367, 1084, 1311
BssNI	GRCGYC	1 cut(s)	1215
BssT1I	CCWWGG	4 cut(s)	334, 595, 606, 1015
Bst2UI	CCWGG	1 cut(s)	669
Bst4CI	ACNGT	3 cut(s)	464, 782, 908
Bst6I	CTCTTC	2 cut(s)	170, 843
BstACI	GRCGYC	1 cut(s)	1215
BstBAI	YACGTR	1 cut(s)	1181
BstC8I	GCNNGC	5 cut(s)	121, 429, 561, 956, 1033
BstDEI	CTNAG	6 cut(s)	125, 302, 936, 1060, 1225, 1320
BstDSI	CCRYGG	6 cut(s)	114, 334, 564, 595, 606, 1015
BstEII	GGTNACC	1 cut(s)	1010
BstENI	CCTNNNNNAGG	1 cut(s)	226
BstF5I	GGATG	1 cut(s)	1243
BstFNI	CGCG	4 cut(s)	116, 227, 288, 326
BstHHI	GCGC	4 cut(s)	288, 328, 1037, 1055
BstKTI	GATC	3 cut(s)	370, 1087, 1314
BstMAI	GTCTC	5 cut(s)	188, 526, 651, 1111, 1222
BstMBI	GATC	3 cut(s)	367, 1084, 1311
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 323, 424, 433, 500, 899, 1061
BstNI	CCWGG	1 cut(s)	669
BstNSI	RCATGY	3 cut(s)	822, 1169, 1245
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	2 cut(s)	667, 724
BstSFI	CTRYAG	2 cut(s)	215, 1048
BstUI	CGCG	4 cut(s)	116, 227, 288, 326
BstV1I	GCAGC	5 cut(s)	201, 515, 955, 1067, 1352
BstZI	CGGCCG	1 cut(s)	100
BsuI	GTATCC	1 cut(s)	142
BsuRI	GGCC	6 cut(s)	102, 109, 333, 374, 954, 1257
BtgI	CCRYGG	6 cut(s)	114, 334, 564, 595, 606, 1015
BtrI	CACGTC	2 cut(s)	136, 391
BtsCI	GGATG	1 cut(s)	1243
BtsIMutI	CAGTG	3 cut(s)	243, 256, 787
BveI	ACCTGC	1 cut(s)	409
Cac8I	GCNNGC	5 cut(s)	121, 429, 561, 956, 1033
CaiI	CAGNNNCTG	2 cut(s)	808, 1150
CciI	TCATGA	1 cut(s)	895
CfoI	GCGC	4 cut(s)	288, 328, 1037, 1055
Cfr10I	RCCGGY	2 cut(s)	642, 830
Cfr13I	GGNCC	3 cut(s)	208, 298, 603
Cfr42I	CCGCGG	1 cut(s)	117
CseI	GACGC	2 cut(s)	425, 1093
Csp6I	GTAC	4 cut(s)	271, 813, 1023, 1370
CspAI	ACCGGT	1 cut(s)	642
CviAII	CATG	8 cut(s)	335, 596, 607, 819, 896, 1016, 1166, 1242
CviQI	GTAC	4 cut(s)	271, 813, 1023, 1370
DdeI	CTNAG	6 cut(s)	125, 302, 936, 1060, 1225, 1320
DpnI	GATC	3 cut(s)	369, 1086, 1313
DpnII	GATC	3 cut(s)	367, 1084, 1311
EaeI	YGGCCR	2 cut(s)	100, 331
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	2 cut(s)	170, 843
EarI	CTCTTC	2 cut(s)	170, 843
EciI	GGCGGA	2 cut(s)	41, 786
Ecl136II	GAGCTC	1 cut(s)	306
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	4 cut(s)	334, 595, 606, 1015
Eco147I	AGGCCT	1 cut(s)	954
Eco24I	GRGCYC	2 cut(s)	308, 895
Eco31I	GGTCTC	1 cut(s)	651
Eco47I	GGWCC	3 cut(s)	208, 298, 603
Eco52I	CGGCCG	1 cut(s)	100
Eco53kI	GAGCTC	1 cut(s)	306
Eco57I	CTGAAG	2 cut(s)	374, 978
Eco88I	CYCGRG	1 cut(s)	307
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	306
EcoNI	CCTNNNNNAGG	1 cut(s)	226
EcoO109I	RGGNCCY	1 cut(s)	208
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRII	CCWGG	1 cut(s)	667
EcoT14I	CCWWGG	4 cut(s)	334, 595, 606, 1015
EcoT22I	ATGCAT	2 cut(s)	65, 1243
EcoT38I	GRGCYC	2 cut(s)	308, 895
ErhI	CCWWGG	4 cut(s)	334, 595, 606, 1015
Esp3I	CGTCTC	3 cut(s)	188, 1111, 1222
FaeI	CATG	8 cut(s)	338, 599, 610, 822, 899, 1019, 1169, 1245
FalI	AAGNNNNNCTT	2 cut(s)	976, 1008
FaqI	GGGAC	1 cut(s)	1339
FatI	CATG	8 cut(s)	334, 595, 606, 818, 895, 1015, 1165, 1241
FauI	CCCGC	1 cut(s)	423
FbaI	TGATCA	2 cut(s)	367, 1311
FblI	GTMKAC	1 cut(s)	1071
Fnu4HI	GCNGC	7 cut(s)	117, 215, 504, 738, 969, 1056, 1341
FokI	GGATG	1 cut(s)	1250
FriOI	GRGCYC	2 cut(s)	308, 895
Fsp4HI	GCNGC	7 cut(s)	117, 215, 504, 738, 969, 1056, 1341
FspBI	CTAG	4 cut(s)	428, 450, 627, 1187
GlaI	GCGC	4 cut(s)	287, 327, 1036, 1054
GluI	GCNGC	7 cut(s)	117, 215, 504, 738, 969, 1056, 1341
GsaI	CCCAGC	2 cut(s)	40, 1154
GsuI	CTGGAG	4 cut(s)	219, 690, 785, 969
HaeIII	GGCC	6 cut(s)	102, 109, 333, 374, 954, 1257
HapII	CCGG	6 cut(s)	103, 146, 375, 643, 726, 831
HgaI	GACGC	2 cut(s)	425, 1093
HhaI	GCGC	4 cut(s)	288, 328, 1037, 1055
Hin1I	GRCGYC	1 cut(s)	1215
Hin1II	CATG	8 cut(s)	338, 599, 610, 822, 899, 1019, 1169, 1245
Hin6I	GCGC	4 cut(s)	286, 326, 1035, 1053
HinP1I	GCGC	4 cut(s)	286, 326, 1035, 1053
HincII	GTYRAC	1 cut(s)	1072
HindII	GTYRAC	1 cut(s)	1072
HindIII	AAGCTT	1 cut(s)	1359
HinfI	GANTC	3 cut(s)	232, 672, 718
HpaII	CCGG	6 cut(s)	103, 146, 375, 643, 726, 831
HphI	GGTGA	5 cut(s)	238, 331, 533, 776, 1022
Hpy166II	GTNNAC	3 cut(s)	133, 322, 1072
Hpy188I	TCNGA	4 cut(s)	89, 531, 1084, 1202
Hpy188III	TCNNGA	3 cut(s)	483, 896, 1172
Hpy8I	GTNNAC	3 cut(s)	133, 322, 1072
Hpy99I	CGWCG	4 cut(s)	60, 344, 752, 854
HpyAV	CCTTC	4 cut(s)	20, 199, 349, 761
HpyCH4III	ACNGT	3 cut(s)	464, 782, 908
HpyCH4IV	ACGT	6 cut(s)	15, 135, 390, 677, 1180, 1215
HpyCH4V	TGCA	8 cut(s)	63, 217, 458, 518, 818, 971, 1241, 1340
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 323, 424, 433, 500, 899, 1061
HpyF3I	CTNAG	6 cut(s)	125, 302, 936, 1060, 1225, 1320
HpySE526I	ACGT	6 cut(s)	15, 135, 390, 677, 1180, 1215
Hsp92I	GRCGYC	1 cut(s)	1215
Hsp92II	CATG	8 cut(s)	338, 599, 610, 822, 899, 1019, 1169, 1245
HspAI	GCGC	4 cut(s)	286, 326, 1035, 1053
Ksp22I	TGATCA	2 cut(s)	367, 1311
KspI	CCGCGG	1 cut(s)	117
Kzo9I	GATC	3 cut(s)	367, 1084, 1311
LguI	GCTCTTC	2 cut(s)	170, 843
LmnI	GCTCC	2 cut(s)	424, 965
Lsp1109I	GCAGC	5 cut(s)	201, 515, 955, 1067, 1352
LweI	GCATC	4 cut(s)	50, 538, 817, 1228
MaeI	CTAG	4 cut(s)	428, 450, 627, 1187
MaeII	ACGT	6 cut(s)	15, 135, 390, 677, 1180, 1215
MaeIII	GTNAC	2 cut(s)	673, 1010
MalI	GATC	3 cut(s)	369, 1086, 1313
MboI	GATC	3 cut(s)	367, 1084, 1311
MboII	GAAGA	2 cut(s)	187, 830
MhlI	GDGCHC	5 cut(s)	246, 308, 616, 838, 895
MlyI	GAGTC	2 cut(s)	226, 681
MmeI	TCCRAC	1 cut(s)	112
Mph1103I	ATGCAT	2 cut(s)	65, 1243
MroXI	GAANNNNTTC	2 cut(s)	717, 756
MseI	TTAA	3 cut(s)	510, 1139, 1262
MslI	CAYNNNNRTG	2 cut(s)	546, 680
MspA1I	CMGCKG	3 cut(s)	116, 740, 1343
MspI	CCGG	6 cut(s)	103, 146, 375, 643, 726, 831
MspR9I	CCNGG	2 cut(s)	669, 726
Mva1269I	GAATGC	1 cut(s)	63
MvaI	CCWGG	1 cut(s)	669
MvnI	CGCG	4 cut(s)	116, 227, 288, 326
MwoI	GCNNNNNNNGC	7 cut(s)	60, 323, 424, 433, 500, 899, 1061
NciI	CCSGG	1 cut(s)	726
NcoI	CCATGG	4 cut(s)	334, 595, 606, 1015
NdeII	GATC	3 cut(s)	367, 1084, 1311
NheI	GCTAGC	1 cut(s)	427
NlaIII	CATG	8 cut(s)	338, 599, 610, 822, 899, 1019, 1169, 1245
NlaIV	GGNNCC	4 cut(s)	379, 487, 1160, 1302
NmeAIII	GCCGAG	1 cut(s)	309
NmuCI	GTSAC	2 cut(s)	673, 1010
NsiI	ATGCAT	2 cut(s)	65, 1243
NspI	RCATGY	3 cut(s)	822, 1169, 1245
OliI	CACNNNNGTG	1 cut(s)	680
PagI	TCATGA	1 cut(s)	895
PaqCI	CACCTGC	1 cut(s)	409
PceI	AGGCCT	1 cut(s)	954
PciI	ACATGT	1 cut(s)	1165
PciSI	GCTCTTC	2 cut(s)	170, 843
PcsI	WCGNNNNNNNCGW	2 cut(s)	336, 1177
PctI	GAATGC	1 cut(s)	63
PdmI	GAANNNNTTC	2 cut(s)	717, 756
PfeI	GAWTC	1 cut(s)	718
PflMI	CCANNNNNTGG	1 cut(s)	947
PinAI	ACCGGT	1 cut(s)	642
PkrI	GCNGC	7 cut(s)	118, 216, 505, 739, 970, 1057, 1342
PleI	GAGTC	2 cut(s)	226, 680
PpsI	GAGTC	2 cut(s)	226, 680
Ppu21I	YACGTR	1 cut(s)	1181
PpuMI	RGGWCCY	1 cut(s)	208
PscI	ACATGT	1 cut(s)	1165
Psp124BI	GAGCTC	1 cut(s)	308
Psp5II	RGGWCCY	1 cut(s)	208
Psp6I	CCWGG	1 cut(s)	667
PspEI	GGTNACC	1 cut(s)	1010
PspFI	CCCAGC	2 cut(s)	36, 1150
PspGI	CCWGG	1 cut(s)	667
PspN4I	GGNNCC	4 cut(s)	379, 487, 1160, 1302
PspPI	GGNCC	3 cut(s)	208, 298, 603
PspPPI	RGGWCCY	1 cut(s)	208
PstI	CTGCAG	1 cut(s)	219
PstNI	CAGNNNCTG	2 cut(s)	808, 1150
PvuII	CAGCTG	1 cut(s)	1343
RsaI	GTAC	4 cut(s)	272, 814, 1024, 1371
RsaNI	GTAC	4 cut(s)	271, 813, 1023, 1370
RseI	CAYNNNNRTG	2 cut(s)	546, 680
SacI	GAGCTC	1 cut(s)	308
SacII	CCGCGG	1 cut(s)	117
SalI	GTCGAC	1 cut(s)	1070
SapI	GCTCTTC	2 cut(s)	170, 843
SaqAI	TTAA	3 cut(s)	510, 1139, 1262
SatI	GCNGC	7 cut(s)	117, 215, 504, 738, 969, 1056, 1341
Sau3AI	GATC	3 cut(s)	367, 1084, 1311
Sau96I	GGNCC	3 cut(s)	208, 298, 603
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	2 cut(s)	226, 681
ScrFI	CCNGG	2 cut(s)	669, 726
SduI	GDGCHC	5 cut(s)	246, 308, 616, 838, 895
SfaNI	GCATC	4 cut(s)	50, 538, 817, 1228
SfcI	CTRYAG	2 cut(s)	215, 1048
Sfr303I	CCGCGG	1 cut(s)	117
SgrBI	CCGCGG	1 cut(s)	117
SinI	GGWCC	3 cut(s)	208, 298, 603
SmiMI	CAYNNNNRTG	2 cut(s)	546, 680
SseBI	AGGCCT	1 cut(s)	954
SsiI	CCGC	9 cut(s)	52, 114, 116, 153, 317, 359, 416, 738, 771
SspI	AATATT	1 cut(s)	1266
SspMI	CTAG	4 cut(s)	428, 450, 627, 1187
SstI	GAGCTC	1 cut(s)	308
StuI	AGGCCT	1 cut(s)	954
StyD4I	CCNGG	2 cut(s)	667, 724
StyI	CCWWGG	4 cut(s)	334, 595, 606, 1015
TaaI	ACNGT	3 cut(s)	464, 782, 908
TaiI	ACGT	6 cut(s)	18, 138, 393, 680, 1183, 1218
TaqI	TCGA	6 cut(s)	58, 750, 849, 874, 1071, 1246
TaqII	GACCGA	1 cut(s)	995
TatI	WGTACW	1 cut(s)	1022
TauI	GCSGC	2 cut(s)	119, 740
TfiI	GAWTC	1 cut(s)	718
Tru1I	TTAA	3 cut(s)	510, 1139, 1262
Tru9I	TTAA	3 cut(s)	510, 1139, 1262
TscAI	CASTG	3 cut(s)	243, 256, 787
TseFI	GTSAC	2 cut(s)	673, 1010
TseI	GCWGC	5 cut(s)	214, 503, 968, 1055, 1340
Tsp45I	GTSAC	2 cut(s)	673, 1010
TspDTI	ATGAA	2 cut(s)	562, 1392
TspGWI	ACGGA	1 cut(s)	212
TspRI	CASTG	3 cut(s)	243, 256, 787
Van91I	CCANNNNNTGG	1 cut(s)	947
VpaK11BI	GGWCC	3 cut(s)	208, 298, 603
XagI	CCTNNNNNAGG	1 cut(s)	226
XapI	RAATTY	2 cut(s)	774, 1091
XceI	RCATGY	3 cut(s)	822, 1169, 1245
XmiI	GTMKAC	1 cut(s)	1071
XmnI	GAANNNNTTC	2 cut(s)	717, 756
XspI	CTAG	4 cut(s)	428, 450, 627, 1187
ZraI	GACGTC	1 cut(s)	1216
ZrmI	AGTACT	1 cut(s)	1024
Zsp2I	ATGCAT	2 cut(s)	65, 1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.