Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

23316669 .. 23318971

Gene Structure 2303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g20540.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGTCTTCCCTTCACGTTTCCCCAAACACCATTTCTCAGACTCTCAATCTCCGCCTTCGATTCAGCCCCAACTTAGGCGGGGAAGTCCGACTAATCAACGGCCGCAGACCGGTCACTGCCTGCCTCAGCGTGGACGTGGAAGCACCCAATACCGCCTCAAAACTAGAGATTTTGAAGAGCAAGGAGGTTTTGGAGACGGAGGCGAAGGTCCTGCTGCAGACCTACGCGAGGACTCCAGTGGTGCTCACCAGTGGCAAAGGTTGTAAATTGTACGACACCGAGGGGCGAGAGTATTTGGACCTGAGCTCGGGGATCGCGGTGAACGCGCTCGGCCATGGCGACGAGGACTGGTTGAAGGCTGTGGTTGATCAGGCCGGAACCCTCACTCACGTCAGCAATCTCTACTATTCAATCCCTCAGGTGGAGCTAGCAAAGCGTCTGGTGGGTGCTAGTTTTGCAGACCGTGTGTTTTTCACGAATTCCGGAACCGAAGCGAACGAAGCAGCCATTAAATTTGCAAGGAAGTTTCAGAGACATGCTCACCCTGATGCGAAAGAGCCGGCCACGAGCTTCATATCTTTCACAAACAGCTTCCATGGGAGGACCATGGGCGCTCTTGCCTTGACTAGCAAAGAGCATTACAGGTCCCCTTTTGAGCCTGTCATGCCTGGCGTCACGTTTGTGGAGTATGGAAATATACAGGCTACCAAAGAACTGATTCAGCCTGGAAAGACTGCCGCTGTTTTCGTTGAGCCTATTCAGGGTGAAGGGGGGATTTACAGTGCTTCAAAGGAGTTTCTGCAGTTTCTGCGTACTGCTTGTGATGATGCTGGTGCTCTTCTGGTATTTGATGAGGTTCAATGTGGTTTAGGTCGAACTGGCTATCTTTGGGCGCATGAGGCTTACGGTGTATTCCCAGATATCATGACACTGGCTAAGCCACTTGCTGGAGGACTTCCCATCGGAGCTGCATTGATGACTGAAAGAGTTGCTTCCGCCATAGCTTTTGGTGACCACGGAAGTACGTTTGCCGGTGCACCTCTTATCTGTAGTGCTGCCCTTGCCGTTCTTGAAAAAATATCCAATCGCAATTTTTTGAATAGCGTCAGTAAGAAGGGTCTCTATTTCAAAAACATCTTAAAACAGAAGTTGGGAGGGAACCCACATGTTCGAGAAATACGTGGTCTCGGGCTTATTATCGGAATTGAATTGGATGTCTCGGCCTCACCAGTTGTGGATGCATGTCGAAACTCTGGCCTGTTGATACTGACTGCTGGAAAAGGCAATGTTCTGAGGCTCGTGCCTCCATTGATCATAACCGAGCAAGAGCTTGATGTTGCAGCTGACATTCTGTCTCAAGCTTTGACAGTACTTGATGAAACTACTTCAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

465

Amino Acids

49.81

Weight (kDa)

6.39

Isoelectric Point (pI)

35.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccII	CGCG	3 cut(s)	227, 317, 326
AccIII	TCCGGA	1 cut(s)	482
AciI	CCGC	7 cut(s)	52, 78, 103, 153, 317, 738, 996
AclWI	GGATC	1 cut(s)	320
AcoI	YGGCCR	3 cut(s)	100, 331, 561
AcsI	RAATTY	2 cut(s)	478, 512
AcyI	GRCGYC	1 cut(s)	672
AfaI	GTAC	4 cut(s)	272, 814, 1024, 1371
AfiI	CCNNNNNNNGG	8 cut(s)	74, 109, 130, 228, 307, 421, 761, 947
AflIII	ACRYGT	1 cut(s)	1165
AgeI	ACCGGT	1 cut(s)	109
AhdI	GACNNNNNGTC	1 cut(s)	1351
AjiI	CACGTC	2 cut(s)	136, 391
AjnI	CCWGG	2 cut(s)	667, 724
AjuI	GAANNNNNNNTTGG	2 cut(s)	16, 48
AleI	CACNNNNGTG	1 cut(s)	680
AluBI	AGCT	9 cut(s)	306, 427, 570, 591, 968, 1004, 1330, 1343, 1361
AluI	AGCT	9 cut(s)	306, 427, 570, 591, 968, 1004, 1330, 1343, 1361
Alw21I	GWGCWC	4 cut(s)	246, 308, 838, 1039
Alw26I	GTCTC	6 cut(s)	188, 526, 1124, 1190, 1222, 1359
Alw44I	GTGCAC	1 cut(s)	1035
AlwI	GGATC	1 cut(s)	320
AlwNI	CAGNNNCTG	1 cut(s)	808
Ama87I	CYCGRG	2 cut(s)	307, 1187
Aor13HI	TCCGGA	1 cut(s)	482
AoxI	GGCC	6 cut(s)	100, 331, 372, 561, 1221, 1255
ApaLI	GTGCAC	1 cut(s)	1035
ApeKI	GCWGC	5 cut(s)	214, 503, 968, 1055, 1340
ApoI	RAATTY	2 cut(s)	478, 512
AsiGI	ACCGGT	1 cut(s)	109
Asp700I	GAANNNNTTC	1 cut(s)	717
AspLEI	GCGC	3 cut(s)	328, 614, 895
AspS9I	GGNCC	4 cut(s)	208, 298, 603, 645
AsuHPI	GGTGA	6 cut(s)	238, 331, 533, 776, 1022, 1218
AsuNHI	GCTAGC	1 cut(s)	427
AvaI	CYCGRG	2 cut(s)	307, 1187
AvaII	GGWCC	4 cut(s)	208, 298, 603, 645
AxyI	CCTNAGG	1 cut(s)	417
BaeGI	GKGCMC	1 cut(s)	1039
BanII	GRGCYC	1 cut(s)	308
BauI	CACGAG	2 cut(s)	565, 1298
Bbv12I	GWGCWC	4 cut(s)	246, 308, 838, 1039
BbvCI	CCTCAGC	1 cut(s)	125
BbvI	GCAGC	5 cut(s)	201, 515, 955, 1042, 1352
BccI	CCATC	1 cut(s)	968
BceAI	ACGGC	2 cut(s)	115, 1049
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	2 cut(s)	669, 726
BclI	TGATCA	2 cut(s)	367, 1311
BcoDI	GTCTC	6 cut(s)	188, 526, 1124, 1190, 1222, 1359
BfaI	CTAG	4 cut(s)	164, 428, 450, 627
BfmI	CTRYAG	3 cut(s)	215, 800, 1048
BfoI	RGCGCY	1 cut(s)	615
BisI	GCNGC	7 cut(s)	103, 215, 504, 738, 969, 1056, 1341
BlpI	GCTNAGC	1 cut(s)	936
BlsI	GCNGC	7 cut(s)	104, 216, 505, 739, 970, 1057, 1342
BmcAI	AGTACT	1 cut(s)	1371
Bme1390I	CCNGG	2 cut(s)	669, 726
Bme18I	GGWCC	4 cut(s)	208, 298, 603, 645
BmeRI	GACNNNNNGTC	1 cut(s)	1351
BmeT110I	CYCGRG	2 cut(s)	307, 1187
BmgBI	CACGTC	2 cut(s)	136, 391
BmgT120I	GGNCC	4 cut(s)	208, 298, 603, 645
BmiI	GGNNCC	4 cut(s)	379, 487, 647, 1160
BmrFI	CCNGG	2 cut(s)	669, 726
BmsI	GCATC	3 cut(s)	538, 817, 1228
BmtI	GCTAGC	1 cut(s)	431
BplI	GAGNNNNNCTC	2 cut(s)	523, 555
BpmI	CTGGAG	2 cut(s)	219, 969
Bpu10I	CCTNAGC	2 cut(s)	125, 302
Bpu1102I	GCTNAGC	1 cut(s)	936
BpuEI	CTTGAG	1 cut(s)	1341
BsaAI	YACGTR	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	672
BsaI	GGTCTC	2 cut(s)	1124, 1190
BsaJI	CCNNGG	5 cut(s)	279, 334, 595, 606, 1015
BsaWI	WCCGGW	2 cut(s)	109, 482
Bsc4I	CCNNNNNNNGG	8 cut(s)	74, 109, 130, 228, 307, 421, 761, 947
Bse118I	RCCGGY	3 cut(s)	109, 559, 1031
Bse1I	ACTGG	6 cut(s)	236, 249, 353, 883, 936, 1229
Bse21I	CCTNAGG	1 cut(s)	417
Bse3DI	GCAATG	1 cut(s)	1291
BseAI	TCCGGA	1 cut(s)	482
BseBI	CCWGG	2 cut(s)	669, 726
BseDI	CCNNGG	5 cut(s)	279, 334, 595, 606, 1015
BseGI	GGATG	2 cut(s)	1219, 1243
BseLI	CCNNNNNNNGG	8 cut(s)	74, 109, 130, 228, 307, 421, 761, 947
BseMI	GCAATG	1 cut(s)	1291
BseMII	CTCAG	5 cut(s)	50, 139, 293, 431, 1283
BseNI	ACTGG	6 cut(s)	236, 249, 353, 883, 936, 1229
BseSI	GKGCMC	1 cut(s)	1039
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	5 cut(s)	201, 515, 955, 1042, 1352
Bsh1236I	CGCG	3 cut(s)	227, 317, 326
Bsh1285I	CGRYCG	1 cut(s)	103
BshFI	GGCC	6 cut(s)	102, 333, 374, 563, 1223, 1257
BshTI	ACCGGT	1 cut(s)	109
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	4 cut(s)	246, 308, 838, 1039
BsiHKCI	CYCGRG	2 cut(s)	307, 1187
BsiSI	CCGG	5 cut(s)	110, 375, 483, 560, 1032
BslFI	GGGAC	1 cut(s)	631
BslI	CCNNNNNNNGG	8 cut(s)	74, 109, 130, 228, 307, 421, 761, 947
BsmAI	GTCTC	6 cut(s)	188, 526, 1124, 1190, 1222, 1359
BsmBI	CGTCTC	1 cut(s)	188
BsmFI	GGGAC	1 cut(s)	631
BsnI	GGCC	6 cut(s)	102, 333, 374, 563, 1223, 1257
Bso31I	GGTCTC	2 cut(s)	1124, 1190
BsoBI	CYCGRG	2 cut(s)	307, 1187
Bsp1286I	GDGCHC	4 cut(s)	246, 308, 838, 1039
Bsp13I	TCCGGA	1 cut(s)	482
Bsp143I	GATC	3 cut(s)	312, 367, 1311
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	3 cut(s)	334, 595, 606
BspACI	CCGC	7 cut(s)	52, 78, 103, 153, 317, 738, 996
BspANI	GGCC	6 cut(s)	102, 333, 374, 563, 1223, 1257
BspCNI	CTCAG	5 cut(s)	49, 138, 294, 430, 1284
BspEI	TCCGGA	1 cut(s)	482
BspFNI	CGCG	3 cut(s)	227, 317, 326
BspHI	TCATGA	1 cut(s)	924
BspLI	GGNNCC	4 cut(s)	379, 487, 647, 1160
BspMAI	CTGCAG	2 cut(s)	219, 804
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	1 cut(s)	320
BspQI	GCTCTTC	2 cut(s)	170, 843
BspTNI	GGTCTC	2 cut(s)	1124, 1190
BsrDI	GCAATG	1 cut(s)	1291
BsrFI	RCCGGY	3 cut(s)	109, 559, 1031
BsrI	ACTGG	6 cut(s)	236, 249, 353, 883, 936, 1229
BssAI	RCCGGY	3 cut(s)	109, 559, 1031
BssECI	CCNNGG	5 cut(s)	279, 334, 595, 606, 1015
BssMI	GATC	3 cut(s)	312, 367, 1311
BssNI	GRCGYC	1 cut(s)	672
BssSI	CACGAG	2 cut(s)	565, 1298
BssT1I	CCWWGG	3 cut(s)	334, 595, 606
Bst2BI	CACGAG	2 cut(s)	565, 1298
Bst2UI	CCWGG	2 cut(s)	669, 726
Bst4CI	ACNGT	4 cut(s)	464, 782, 908, 1369
Bst6I	CTCTTC	2 cut(s)	170, 843
BstACI	GRCGYC	1 cut(s)	672
BstAPI	GCANNNNNTGC	1 cut(s)	808
BstBAI	YACGTR	1 cut(s)	1181
BstC8I	GCNNGC	3 cut(s)	121, 429, 561
BstDEI	CTNAG	7 cut(s)	36, 73, 125, 302, 417, 936, 1292
BstDSI	CCRYGG	4 cut(s)	334, 595, 606, 1015
BstEII	GGTNACC	1 cut(s)	1010
BstENI	CCTNNNNNAGG	1 cut(s)	226
BstF5I	GGATG	2 cut(s)	1219, 1243
BstFNI	CGCG	3 cut(s)	227, 317, 326
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	3 cut(s)	328, 614, 895
BstKTI	GATC	3 cut(s)	315, 370, 1314
BstMAI	GTCTC	6 cut(s)	188, 526, 1124, 1190, 1222, 1359
BstMBI	GATC	3 cut(s)	312, 367, 1311
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	8 cut(s)	323, 433, 455, 500, 664, 808, 899, 1061
BstNI	CCWGG	2 cut(s)	669, 726
BstNSI	RCATGY	3 cut(s)	539, 1169, 1245
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	2 cut(s)	667, 724
BstSFI	CTRYAG	3 cut(s)	215, 800, 1048
BstSLI	GKGCMC	1 cut(s)	1039
BstUI	CGCG	3 cut(s)	227, 317, 326
BstV1I	GCAGC	5 cut(s)	201, 515, 955, 1042, 1352
BstZI	CGGCCG	1 cut(s)	100
Bsu36I	CCTNAGG	1 cut(s)	417
BsuRI	GGCC	6 cut(s)	102, 333, 374, 563, 1223, 1257
BtgI	CCRYGG	4 cut(s)	334, 595, 606, 1015
BtrI	CACGTC	2 cut(s)	136, 391
BtsCI	GGATG	2 cut(s)	1219, 1243
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	5 cut(s)	114, 243, 256, 787, 929
Cac8I	GCNNGC	3 cut(s)	121, 429, 561
CaiI	CAGNNNCTG	1 cut(s)	808
CciI	TCATGA	1 cut(s)	924
CfoI	GCGC	3 cut(s)	328, 614, 895
Cfr10I	RCCGGY	3 cut(s)	109, 559, 1031
Cfr13I	GGNCC	4 cut(s)	208, 298, 603, 645
CseI	GACGC	3 cut(s)	425, 661, 1093
Csp6I	GTAC	4 cut(s)	271, 813, 1023, 1370
CspAI	ACCGGT	1 cut(s)	109
CviAII	CATG	9 cut(s)	335, 536, 596, 607, 664, 896, 925, 1166, 1242
CviQI	GTAC	4 cut(s)	271, 813, 1023, 1370
DdeI	CTNAG	7 cut(s)	36, 73, 125, 302, 417, 936, 1292
DpnI	GATC	3 cut(s)	314, 369, 1313
DpnII	GATC	3 cut(s)	312, 367, 1311
DriI	GACNNNNNGTC	1 cut(s)	1351
EaeI	YGGCCR	3 cut(s)	100, 331, 561
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	2 cut(s)	170, 843
Eam1105I	GACNNNNNGTC	1 cut(s)	1351
EarI	CTCTTC	2 cut(s)	170, 843
EciI	GGCGGA	2 cut(s)	41, 985
Ecl136II	GAGCTC	1 cut(s)	306
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	334, 595, 606
Eco24I	GRGCYC	1 cut(s)	308
Eco31I	GGTCTC	2 cut(s)	1124, 1190
Eco32I	GATATC	1 cut(s)	922
Eco47I	GGWCC	4 cut(s)	208, 298, 603, 645
Eco52I	CGGCCG	1 cut(s)	100
Eco53kI	GAGCTC	1 cut(s)	306
Eco81I	CCTNAGG	1 cut(s)	417
Eco88I	CYCGRG	2 cut(s)	307, 1187
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	306
EcoNI	CCTNNNNNAGG	1 cut(s)	226
EcoO109I	RGGNCCY	2 cut(s)	208, 645
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRI	GAATTC	1 cut(s)	478
EcoRII	CCWGG	2 cut(s)	667, 724
EcoRV	GATATC	1 cut(s)	922
EcoT14I	CCWWGG	3 cut(s)	334, 595, 606
EcoT22I	ATGCAT	1 cut(s)	1243
EcoT38I	GRGCYC	1 cut(s)	308
ErhI	CCWWGG	3 cut(s)	334, 595, 606
Esp3I	CGTCTC	1 cut(s)	188
FaeI	CATG	9 cut(s)	338, 539, 599, 610, 667, 899, 928, 1169, 1245
FalI	AAGNNNNNCTT	2 cut(s)	976, 1008
FaqI	GGGAC	1 cut(s)	631
FatI	CATG	9 cut(s)	334, 535, 595, 606, 663, 895, 924, 1165, 1241
FauI	CCCGC	1 cut(s)	71
FbaI	TGATCA	2 cut(s)	367, 1311
Fnu4HI	GCNGC	7 cut(s)	103, 215, 504, 738, 969, 1056, 1341
FokI	GGATG	2 cut(s)	1226, 1250
FriOI	GRGCYC	1 cut(s)	308
Fsp4HI	GCNGC	7 cut(s)	103, 215, 504, 738, 969, 1056, 1341
FspBI	CTAG	4 cut(s)	164, 428, 450, 627
GlaI	GCGC	3 cut(s)	327, 613, 894
GluI	GCNGC	7 cut(s)	103, 215, 504, 738, 969, 1056, 1341
GsuI	CTGGAG	2 cut(s)	219, 969
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	6 cut(s)	102, 333, 374, 563, 1223, 1257
HapII	CCGG	5 cut(s)	110, 375, 483, 560, 1032
HgaI	GACGC	3 cut(s)	425, 661, 1093
HhaI	GCGC	3 cut(s)	328, 614, 895
Hin1I	GRCGYC	1 cut(s)	672
Hin1II	CATG	9 cut(s)	338, 539, 599, 610, 667, 899, 928, 1169, 1245
Hin6I	GCGC	3 cut(s)	326, 612, 893
HinP1I	GCGC	3 cut(s)	326, 612, 893
HindIII	AAGCTT	1 cut(s)	1359
HinfI	GANTC	4 cut(s)	40, 60, 232, 718
HpaII	CCGG	5 cut(s)	110, 375, 483, 560, 1032
HphI	GGTGA	6 cut(s)	238, 331, 533, 776, 1022, 1218
Hpy166II	GTNNAC	3 cut(s)	133, 322, 1037
Hpy188I	TCNGA	6 cut(s)	39, 89, 531, 965, 1202, 1293
Hpy188III	TCNNGA	5 cut(s)	475, 483, 925, 1070, 1172
Hpy8I	GTNNAC	3 cut(s)	133, 322, 1037
Hpy99I	CGWCG	1 cut(s)	344
HpyAV	CCTTC	6 cut(s)	20, 65, 199, 349, 761, 1108
HpyCH4III	ACNGT	4 cut(s)	464, 782, 908, 1369
HpyCH4IV	ACGT	6 cut(s)	15, 135, 390, 677, 1025, 1180
HpyCH4V	TGCA	8 cut(s)	217, 458, 518, 802, 971, 1037, 1241, 1340
HpyF10VI	GCNNNNNNNGC	8 cut(s)	323, 433, 455, 500, 664, 808, 899, 1061
HpyF3I	CTNAG	7 cut(s)	36, 73, 125, 302, 417, 936, 1292
HpySE526I	ACGT	6 cut(s)	15, 135, 390, 677, 1025, 1180
Hsp92I	GRCGYC	1 cut(s)	672
Hsp92II	CATG	9 cut(s)	338, 539, 599, 610, 667, 899, 928, 1169, 1245
HspAI	GCGC	3 cut(s)	326, 612, 893
Kpn2I	TCCGGA	1 cut(s)	482
KroI	GCCGGC	1 cut(s)	559
KroNI	GCCGGC	1 cut(s)	561
Ksp22I	TGATCA	2 cut(s)	367, 1311
Kzo9I	GATC	3 cut(s)	312, 367, 1311
LguI	GCTCTTC	2 cut(s)	170, 843
LmnI	GCTCC	2 cut(s)	424, 965
Lsp1109I	GCAGC	5 cut(s)	201, 515, 955, 1042, 1352
LweI	GCATC	3 cut(s)	538, 817, 1228
MaeI	CTAG	4 cut(s)	164, 428, 450, 627
MaeII	ACGT	6 cut(s)	15, 135, 390, 677, 1025, 1180
MaeIII	GTNAC	3 cut(s)	112, 673, 1010
MalI	GATC	3 cut(s)	314, 369, 1313
MboI	GATC	3 cut(s)	312, 367, 1311
MboII	GAAGA	2 cut(s)	187, 830
MhlI	GDGCHC	4 cut(s)	246, 308, 838, 1039
MluCI	AATT	7 cut(s)	266, 478, 512, 1090, 1203, 1208, 1390
MlyI	GAGTC	2 cut(s)	34, 226
MmeI	TCCRAC	1 cut(s)	112
Mph1103I	ATGCAT	1 cut(s)	1243
MroI	TCCGGA	1 cut(s)	482
MroNI	GCCGGC	1 cut(s)	559
MroXI	GAANNNNTTC	1 cut(s)	717
MseI	TTAA	2 cut(s)	510, 1139
MslI	CAYNNNNRTG	2 cut(s)	546, 680
MspA1I	CMGCKG	2 cut(s)	740, 1343
MspI	CCGG	5 cut(s)	110, 375, 483, 560, 1032
MspR9I	CCNGG	2 cut(s)	669, 726
MvaI	CCWGG	2 cut(s)	669, 726
MvnI	CGCG	3 cut(s)	227, 317, 326
MwoI	GCNNNNNNNGC	8 cut(s)	323, 433, 455, 500, 664, 808, 899, 1061
NaeI	GCCGGC	1 cut(s)	561
NcoI	CCATGG	3 cut(s)	334, 595, 606
NdeII	GATC	3 cut(s)	312, 367, 1311
NgoMIV	GCCGGC	1 cut(s)	559
NheI	GCTAGC	1 cut(s)	427
NlaIII	CATG	9 cut(s)	338, 539, 599, 610, 667, 899, 928, 1169, 1245
NlaIV	GGNNCC	4 cut(s)	379, 487, 647, 1160
NmeAIII	GCCGAG	2 cut(s)	309, 1199
NmuCI	GTSAC	3 cut(s)	112, 673, 1010
NsiI	ATGCAT	1 cut(s)	1243
NspI	RCATGY	3 cut(s)	539, 1169, 1245
OliI	CACNNNNGTG	1 cut(s)	680
PagI	TCATGA	1 cut(s)	924
PciI	ACATGT	1 cut(s)	1165
PciSI	GCTCTTC	2 cut(s)	170, 843
PcsI	WCGNNNNNNNCGW	2 cut(s)	336, 1177
PdiI	GCCGGC	1 cut(s)	561
PdmI	GAANNNNTTC	1 cut(s)	717
PfeI	GAWTC	2 cut(s)	60, 718
PflMI	CCANNNNNTGG	1 cut(s)	947
PinAI	ACCGGT	1 cut(s)	109
PkrI	GCNGC	7 cut(s)	104, 216, 505, 739, 970, 1057, 1342
PleI	GAGTC	2 cut(s)	34, 226
PpsI	GAGTC	2 cut(s)	34, 226
Ppu21I	YACGTR	1 cut(s)	1181
PpuMI	RGGWCCY	2 cut(s)	208, 645
PscI	ACATGT	1 cut(s)	1165
Psp124BI	GAGCTC	1 cut(s)	308
Psp5II	RGGWCCY	2 cut(s)	208, 645
Psp6I	CCWGG	2 cut(s)	667, 724
PspEI	GGTNACC	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	667, 724
PspN4I	GGNNCC	4 cut(s)	379, 487, 647, 1160
PspPI	GGNCC	4 cut(s)	208, 298, 603, 645
PspPPI	RGGWCCY	2 cut(s)	208, 645
PstI	CTGCAG	2 cut(s)	219, 804
PstNI	CAGNNNCTG	1 cut(s)	808
PvuII	CAGCTG	1 cut(s)	1343
RsaI	GTAC	4 cut(s)	272, 814, 1024, 1371
RsaNI	GTAC	4 cut(s)	271, 813, 1023, 1370
RseI	CAYNNNNRTG	2 cut(s)	546, 680
SacI	GAGCTC	1 cut(s)	308
SapI	GCTCTTC	2 cut(s)	170, 843
SaqAI	TTAA	2 cut(s)	510, 1139
SatI	GCNGC	7 cut(s)	103, 215, 504, 738, 969, 1056, 1341
Sau3AI	GATC	3 cut(s)	312, 367, 1311
Sau96I	GGNCC	4 cut(s)	208, 298, 603, 645
ScaI	AGTACT	1 cut(s)	1371
SchI	GAGTC	2 cut(s)	34, 226
ScrFI	CCNGG	2 cut(s)	669, 726
SduI	GDGCHC	4 cut(s)	246, 308, 838, 1039
SfaNI	GCATC	3 cut(s)	538, 817, 1228
SfcI	CTRYAG	3 cut(s)	215, 800, 1048
SinI	GGWCC	4 cut(s)	208, 298, 603, 645
SmiMI	CAYNNNNRTG	2 cut(s)	546, 680
SmlI	CTYRAG	1 cut(s)	1356
SmoI	CTYRAG	1 cut(s)	1356
Sse9I	AATT	7 cut(s)	266, 478, 512, 1090, 1203, 1208, 1390
SsiI	CCGC	7 cut(s)	52, 78, 103, 153, 317, 738, 996
SspMI	CTAG	4 cut(s)	164, 428, 450, 627
SstI	GAGCTC	1 cut(s)	308
StyD4I	CCNGG	2 cut(s)	667, 724
StyI	CCWWGG	3 cut(s)	334, 595, 606
TaaI	ACNGT	4 cut(s)	464, 782, 908, 1369
TaiI	ACGT	6 cut(s)	18, 138, 393, 680, 1028, 1183
TaqI	TCGA	4 cut(s)	58, 874, 1171, 1246
TasI	AATT	7 cut(s)	266, 478, 512, 1090, 1203, 1208, 1390
TatI	WGTACW	1 cut(s)	1369
TauI	GCSGC	2 cut(s)	105, 740
TfiI	GAWTC	2 cut(s)	60, 718
Tru1I	TTAA	2 cut(s)	510, 1139
Tru9I	TTAA	2 cut(s)	510, 1139
TscAI	CASTG	5 cut(s)	121, 243, 256, 787, 936
TseFI	GTSAC	3 cut(s)	112, 673, 1010
TseI	GCWGC	5 cut(s)	214, 503, 968, 1055, 1340
Tsp45I	GTSAC	3 cut(s)	112, 673, 1010
TspDTI	ATGAA	2 cut(s)	562, 1392
TspGWI	ACGGA	2 cut(s)	212, 1032
TspRI	CASTG	5 cut(s)	121, 243, 256, 787, 936
Van91I	CCANNNNNTGG	1 cut(s)	947
VneI	GTGCAC	1 cut(s)	1035
VpaK11BI	GGWCC	4 cut(s)	208, 298, 603, 645
XagI	CCTNNNNNAGG	1 cut(s)	226
XapI	RAATTY	2 cut(s)	478, 512
XceI	RCATGY	3 cut(s)	539, 1169, 1245
XmnI	GAANNNNTTC	1 cut(s)	717
XspI	CTAG	4 cut(s)	164, 428, 450, 627
ZrmI	AGTACT	1 cut(s)	1371
Zsp2I	ATGCAT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.