Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00729

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

4675 .. 7185

Gene Structure 2511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G015720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGACTTCCCTTCAAATCTCCCCCAACACAATTTCTCAACCTCTCAATCTCCGCCGTCAATTCAGCTCAAACTTGGACCAAAGGGTCCGACTAATCAATGGCCGGAGACCTGTGATGGCTTGCCTTAGCCTTGACGTGGAAGCACCAGTTACTGCATCAAAATCAGGGTTTTCGAAGAGCAAGGAGGTCATAGAGACAGAGGCGAAGGTTCTGGTGGGGACATACGCAAGAACTCCAGTGGTGTTGGCCAGTGGCAAAGGTTGTAAATTGTACGACATCGAGGGGAGAGAGTATTTGGATTTGAGCTCAGGGATCGCAGTGAATGCACTCGGACATGGTGATGAGGACTGGTTGAAGGCTGTGGTTGAACAGGCCAATACCCTCACTCATGTCAGCAATGTCTACTACTCCATCCCTCAGGTGGAACTAGCAGAGCGTTTGGTGGGCTCTTGTTTTGCAGACCGTGTGTTCTTCACTAATTCTGGAACTGAAGCAAACGAAGCAGCCATTAAATTTGCGAGGAAGTTTCAGAGACACAATCATCCCGATGTGAAAGAGCCTGCCACAAACTTCATATCTTTCACTAACAGCTTCCATGGCAGGACCATAGGTGCGCTTGCCTTGACTAGCAAAGAGTATTACAGGTCTCCGTTTGAGCCCGTCATGCCTGGAGTCACATTTGCAGAGTATGGAAATATAGAAGCTACCAGAAAATTGATTCAGCCTGGAAAAACTGCTGCAGTTTTTGTTGAACCTATCCAGGGTGAAGGGGGCATATACAGTGCTACCAAGGAGTTTCTGCAATTTCTGCGTACTGCTTGTGATGAGGCTGGAGCTCTTCTGGTGTTCGACGAGGTTCAGTGTGGTTTAGGCCGAACTGGGTATCTGTGGGCGCATGAGGCATTTGGTGTGTTCCCAGATATAATGACACTAGCTAAGCCACTAGCTGGAGGCCTACCCATTGGAGCTGCATTGGTGACTGAAAGAGTTGCTTCTGCCATAGCTTTCGGTGACCATGGAAGTACTTTTGCCGGTGCACCTCTCGTGTGCAATGCTGCCTTAGCCGTTCTCAAAAAGATATCAAATCCCAATTTTCTGGACAGTGTCTCTAAGAAAGAAGCTGGGAGGAAACCCTCATGTGAGAGAAATACGCGGTTTTGGGCTTATTTTGGAGTTGAATTGGATGTCCCTGCCTCACCTCTTGTGGATGCATGTAGAAGTGCCGGCCTTCTAGTGTTAACTGCTGGAAAAGGCAATGTTGTGAGGCTAGTGCCTCCATTGATCATAAGTGAGCAGGAGCTTGATCGTGCAGCTGAGATTTTGTACCAAGCGTTGCCTGTACTTGACCAAAAAAATTCAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

454

Amino Acids

49.13

Weight (kDa)

6.68

Isoelectric Point (pI)

38.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	78 - 445	1.3e-101	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	83
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccI	GTMKAC	1 cut(s)	402
AccII	CGCG	1 cut(s)	1153
AciI	CCGC	2 cut(s)	52, 1153
AclWI	GGATC	1 cut(s)	320
AcoI	YGGCCR	2 cut(s)	100, 246
AcsI	RAATTY	2 cut(s)	512, 1354
AcuI	CTGAAG	1 cut(s)	510
AfaI	GTAC	5 cut(s)	272, 814, 1024, 1325, 1341
AfiI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
AgsI	TTSAA	6 cut(s)	14, 355, 368, 752, 1178, 1359
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	3 cut(s)	667, 724, 759
Alw21I	GWGCWC	3 cut(s)	308, 838, 1039
Alw26I	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
Alw44I	GTGCAC	1 cut(s)	1035
AlwI	GGATC	1 cut(s)	320
AlwNI	CAGNNNCTG	1 cut(s)	152
AoxI	GGCC	6 cut(s)	100, 246, 372, 871, 952, 1225
ApaLI	GTGCAC	1 cut(s)	1035
ApeKI	GCWGC	5 cut(s)	503, 737, 968, 1055, 1310
ApoI	RAATTY	2 cut(s)	512, 1354
AspLEI	GCGC	2 cut(s)	616, 895
AspS9I	GGNCC	3 cut(s)	76, 85, 603
AsuHPI	GGTGA	5 cut(s)	350, 776, 988, 1022, 1188
AsuII	TTCGAA	1 cut(s)	173
AvaII	GGWCC	3 cut(s)	76, 85, 603
AxyI	CCTNAGG	1 cut(s)	417
BaeGI	GKGCMC	1 cut(s)	1039
BalI	TGGCCA	1 cut(s)	248
BanII	GRGCYC	4 cut(s)	308, 449, 660, 838
BauI	CACGAG	1 cut(s)	1043
Bbv12I	GWGCWC	3 cut(s)	308, 838, 1039
BbvI	GCAGC	5 cut(s)	515, 724, 955, 1042, 1322
BccI	CCATC	2 cut(s)	109, 419
BceAI	ACGGC	2 cut(s)	39, 1049
BciT130I	CCWGG	3 cut(s)	669, 726, 761
BclI	TGATCA	1 cut(s)	1281
BcoDI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BfaI	CTAG	6 cut(s)	428, 627, 932, 944, 1232, 1268
BfmI	CTRYAG	1 cut(s)	738
BisI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1311
BlpI	GCTNAGC	1 cut(s)	936
BlsI	GCNGC	5 cut(s)	505, 739, 970, 1057, 1312
BmcAI	AGTACT	1 cut(s)	1024
Bme1390I	CCNGG	3 cut(s)	669, 726, 761
Bme18I	GGWCC	3 cut(s)	76, 85, 603
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	3 cut(s)	76, 85, 603
BmiI	GGNNCC	1 cut(s)	86
BmrFI	CCNGG	3 cut(s)	669, 726, 761
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	2 cut(s)	164, 1198
BmuI	ACTGGG	1 cut(s)	888
BpmI	CTGGAG	4 cut(s)	219, 690, 852, 969
Bpu10I	CCTNAGC	3 cut(s)	125, 307, 1060
Bpu1102I	GCTNAGC	1 cut(s)	936
Bpu14I	TTCGAA	1 cut(s)	173
BsaI	GGTCTC	2 cut(s)	100, 651
BsaJI	CCNNGG	4 cut(s)	595, 760, 789, 1015
Bsc4I	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
Bse118I	RCCGGY	2 cut(s)	1031, 1223
Bse1I	ACTGG	5 cut(s)	146, 236, 249, 353, 883
Bse21I	CCTNAGG	1 cut(s)	417
Bse3DI	GCAATG	3 cut(s)	403, 1057, 1261
BseBI	CCWGG	3 cut(s)	669, 726, 761
BseDI	CCNNGG	4 cut(s)	595, 760, 789, 1015
BseGI	GGATG	4 cut(s)	411, 541, 1189, 1213
BseLI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
BseMI	GCAATG	3 cut(s)	403, 1057, 1261
BseMII	CTCAG	3 cut(s)	321, 431, 1305
BseNI	ACTGG	5 cut(s)	146, 236, 249, 353, 883
BseSI	GKGCMC	1 cut(s)	1039
BseXI	GCAGC	5 cut(s)	515, 724, 955, 1042, 1322
BseYI	CCCAGC	1 cut(s)	1121
BsgI	GTGCAG	1 cut(s)	1329
Bsh1236I	CGCG	1 cut(s)	1153
BshFI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1227
BsiHKAI	GWGCWC	3 cut(s)	308, 838, 1039
BsiSI	CCGG	3 cut(s)	103, 1032, 1224
BslFI	GGGAC	2 cut(s)	232, 1172
BslI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
BsmAI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BsmFI	GGGAC	2 cut(s)	232, 1172
BsmI	GAATGC	1 cut(s)	328
BsnI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1227
Bso31I	GGTCTC	2 cut(s)	100, 651
Bsp119I	TTCGAA	1 cut(s)	173
Bsp1286I	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
Bsp143I	GATC	3 cut(s)	312, 1281, 1303
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	2 cut(s)	595, 1015
BspACI	CCGC	2 cut(s)	52, 1153
BspANI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1227
BspCNI	CTCAG	3 cut(s)	320, 430, 1306
BspFNI	CGCG	1 cut(s)	1153
BspLI	GGNNCC	1 cut(s)	86
BspMAI	CTGCAG	1 cut(s)	742
BspPI	GGATC	1 cut(s)	320
BspQI	GCTCTTC	2 cut(s)	170, 843
BspT104I	TTCGAA	1 cut(s)	173
BspTNI	GGTCTC	2 cut(s)	100, 651
BsrDI	GCAATG	3 cut(s)	403, 1057, 1261
BsrFI	RCCGGY	2 cut(s)	1031, 1223
BsrI	ACTGG	5 cut(s)	146, 236, 249, 353, 883
BssAI	RCCGGY	2 cut(s)	1031, 1223
BssECI	CCNNGG	4 cut(s)	595, 760, 789, 1015
BssMI	GATC	3 cut(s)	312, 1281, 1303
BssSI	CACGAG	1 cut(s)	1043
BssT1I	CCWWGG	3 cut(s)	595, 789, 1015
Bst2BI	CACGAG	1 cut(s)	1043
Bst2UI	CCWGG	3 cut(s)	669, 726, 761
Bst4CI	ACNGT	3 cut(s)	464, 782, 1103
Bst6I	CTCTTC	2 cut(s)	170, 843
BstAPI	GCANNNNNTGC	2 cut(s)	323, 808
BstBI	TTCGAA	1 cut(s)	173
BstC8I	GCNNGC	4 cut(s)	121, 561, 618, 1225
BstDEI	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1314
BstDSI	CCRYGG	2 cut(s)	595, 1015
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	4 cut(s)	411, 541, 1189, 1213
BstFNI	CGCG	1 cut(s)	1153
BstHHI	GCGC	2 cut(s)	616, 895
BstKTI	GATC	3 cut(s)	315, 1284, 1306
BstMAI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BstMBI	GATC	3 cut(s)	312, 1281, 1303
BstMWI	GCNNNNNNNGC	7 cut(s)	323, 500, 597, 664, 808, 899, 1061
BstNI	CCWGG	3 cut(s)	669, 726, 761
BstNSI	RCATGY	1 cut(s)	1215
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	667, 724, 759
BstSFI	CTRYAG	1 cut(s)	738
BstSLI	GKGCMC	1 cut(s)	1039
BstUI	CGCG	1 cut(s)	1153
BstV1I	GCAGC	5 cut(s)	515, 724, 955, 1042, 1322
BstXI	CCANNNNNNTGG	1 cut(s)	1096
Bsu36I	CCTNAGG	1 cut(s)	417
BsuRI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1227
BtgI	CCRYGG	2 cut(s)	595, 1015
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	4 cut(s)	411, 541, 1189, 1213
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	6 cut(s)	243, 256, 324, 787, 866, 1108
Cac8I	GCNNGC	4 cut(s)	121, 561, 618, 1225
CaiI	CAGNNNCTG	1 cut(s)	152
CfoI	GCGC	2 cut(s)	616, 895
Cfr10I	RCCGGY	2 cut(s)	1031, 1223
Cfr13I	GGNCC	3 cut(s)	76, 85, 603
Csp6I	GTAC	5 cut(s)	271, 813, 1023, 1324, 1340
CviAII	CATG	8 cut(s)	335, 389, 596, 664, 896, 1016, 1137, 1212
CviQI	GTAC	5 cut(s)	271, 813, 1023, 1324, 1340
DdeI	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1314
DpnI	GATC	3 cut(s)	314, 1283, 1305
DpnII	GATC	3 cut(s)	312, 1281, 1303
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	2 cut(s)	100, 246
Eam1104I	CTCTTC	2 cut(s)	170, 843
EarI	CTCTTC	2 cut(s)	170, 843
EciI	GGCGGA	1 cut(s)	41
Ecl136II	GAGCTC	2 cut(s)	306, 836
Eco130I	CCWWGG	3 cut(s)	595, 789, 1015
Eco147I	AGGCCT	1 cut(s)	954
Eco24I	GRGCYC	4 cut(s)	308, 449, 660, 838
Eco31I	GGTCTC	2 cut(s)	100, 651
Eco32I	GATATC	1 cut(s)	1080
Eco47I	GGWCC	3 cut(s)	76, 85, 603
Eco53kI	GAGCTC	2 cut(s)	306, 836
Eco57I	CTGAAG	1 cut(s)	510
Eco81I	CCTNAGG	1 cut(s)	417
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	2 cut(s)	306, 836
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRII	CCWGG	3 cut(s)	667, 724, 759
EcoRV	GATATC	1 cut(s)	1080
EcoT14I	CCWWGG	3 cut(s)	595, 789, 1015
EcoT22I	ATGCAT	1 cut(s)	1213
EcoT38I	GRGCYC	4 cut(s)	308, 449, 660, 838
ErhI	CCWWGG	3 cut(s)	595, 789, 1015
FaeI	CATG	8 cut(s)	338, 392, 599, 667, 899, 1019, 1140, 1215
FalI	AAGNNNNNCTT	2 cut(s)	976, 1008
FaqI	GGGAC	2 cut(s)	232, 1172
FatI	CATG	8 cut(s)	334, 388, 595, 663, 895, 1015, 1136, 1211
FbaI	TGATCA	1 cut(s)	1281
FblI	GTMKAC	1 cut(s)	402
Fnu4HI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1311
FokI	GGATG	4 cut(s)	398, 528, 1196, 1220
FriOI	GRGCYC	4 cut(s)	308, 449, 660, 838
Fsp4HI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1311
FspBI	CTAG	6 cut(s)	428, 627, 932, 944, 1232, 1268
GlaI	GCGC	2 cut(s)	615, 894
GluI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1311
GsaI	CCCAGC	1 cut(s)	1125
GsuI	CTGGAG	4 cut(s)	219, 690, 852, 969
HaeIII	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1227
HapII	CCGG	3 cut(s)	103, 1032, 1224
HhaI	GCGC	2 cut(s)	616, 895
Hin1II	CATG	8 cut(s)	338, 392, 599, 667, 899, 1019, 1140, 1215
Hin6I	GCGC	2 cut(s)	614, 893
HinP1I	GCGC	2 cut(s)	614, 893
HincII	GTYRAC	1 cut(s)	1239
HindII	GTYRAC	1 cut(s)	1239
HinfI	GANTC	2 cut(s)	672, 718
HpaI	GTTAAC	1 cut(s)	1239
HpaII	CCGG	3 cut(s)	103, 1032, 1224
HphI	GGTGA	5 cut(s)	350, 776, 988, 1022, 1188
Hpy166II	GTNNAC	3 cut(s)	403, 1037, 1239
Hpy188I	TCNGA	3 cut(s)	89, 332, 531
Hpy188III	TCNNGA	3 cut(s)	483, 545, 1097
Hpy8I	GTNNAC	3 cut(s)	403, 1037, 1239
Hpy99I	CGWCG	1 cut(s)	854
HpyAV	CCTTC	5 cut(s)	20, 199, 349, 761, 1238
HpyCH4III	ACNGT	3 cut(s)	464, 782, 1103
HpyCH4IV	ACGT	1 cut(s)	135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	323, 500, 597, 664, 808, 899, 1061
HpyF3I	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1314
HpySE526I	ACGT	1 cut(s)	135
Hsp92II	CATG	8 cut(s)	338, 392, 599, 667, 899, 1019, 1140, 1215
HspAI	GCGC	2 cut(s)	614, 893
KroI	GCCGGC	1 cut(s)	1223
KroNI	GCCGGC	1 cut(s)	1225
Ksp22I	TGATCA	1 cut(s)	1281
KspAI	GTTAAC	1 cut(s)	1239
Kzo9I	GATC	3 cut(s)	312, 1281, 1303
LguI	GCTCTTC	2 cut(s)	170, 843
LmnI	GCTCC	3 cut(s)	833, 965, 1297
Lsp1109I	GCAGC	5 cut(s)	515, 724, 955, 1042, 1322
LweI	GCATC	2 cut(s)	164, 1198
MaeI	CTAG	6 cut(s)	428, 627, 932, 944, 1232, 1268
MaeII	ACGT	1 cut(s)	135
MaeIII	GTNAC	4 cut(s)	148, 673, 976, 1010
MalI	GATC	3 cut(s)	314, 1283, 1305
MboI	GATC	3 cut(s)	312, 1281, 1303
MboII	GAAGA	3 cut(s)	187, 463, 830
MhlI	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	1 cut(s)	681
MmeI	TCCRAC	1 cut(s)	112
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	1213
MroNI	GCCGGC	1 cut(s)	1223
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	2 cut(s)	510, 1238
MslI	CAYNNNNRTG	2 cut(s)	339, 546
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	1313
MspI	CCGG	3 cut(s)	103, 1032, 1224
MspR9I	CCNGG	3 cut(s)	669, 726, 761
Mva1269I	GAATGC	1 cut(s)	328
MvaI	CCWGG	3 cut(s)	669, 726, 761
MvnI	CGCG	1 cut(s)	1153
MwoI	GCNNNNNNNGC	7 cut(s)	323, 500, 597, 664, 808, 899, 1061
NaeI	GCCGGC	1 cut(s)	1225
NcoI	CCATGG	2 cut(s)	595, 1015
NdeII	GATC	3 cut(s)	312, 1281, 1303
NgoMIV	GCCGGC	1 cut(s)	1223
NlaIII	CATG	8 cut(s)	338, 392, 599, 667, 899, 1019, 1140, 1215
NlaIV	GGNNCC	1 cut(s)	86
NmuCI	GTSAC	3 cut(s)	673, 976, 1010
NsiI	ATGCAT	1 cut(s)	1213
NspI	RCATGY	1 cut(s)	1215
NspV	TTCGAA	1 cut(s)	173
PceI	AGGCCT	1 cut(s)	954
PciSI	GCTCTTC	2 cut(s)	170, 843
PctI	GAATGC	1 cut(s)	328
PdiI	GCCGGC	1 cut(s)	1225
PfeI	GAWTC	1 cut(s)	718
PflFI	GACNNNGTC	1 cut(s)	1103
PflMI	CCANNNNNTGG	1 cut(s)	947
PkrI	GCNGC	5 cut(s)	505, 739, 970, 1057, 1312
PleI	GAGTC	1 cut(s)	680
PpsI	GAGTC	1 cut(s)	680
Psp124BI	GAGCTC	2 cut(s)	308, 838
Psp6I	CCWGG	3 cut(s)	667, 724, 759
PspEI	GGTNACC	1 cut(s)	1010
PspFI	CCCAGC	1 cut(s)	1121
PspGI	CCWGG	3 cut(s)	667, 724, 759
PspN4I	GGNNCC	1 cut(s)	86
PspPI	GGNCC	3 cut(s)	76, 85, 603
PstI	CTGCAG	1 cut(s)	742
PstNI	CAGNNNCTG	1 cut(s)	152
PsyI	GACNNNGTC	1 cut(s)	1103
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	5 cut(s)	272, 814, 1024, 1325, 1341
RsaNI	GTAC	5 cut(s)	271, 813, 1023, 1324, 1340
RseI	CAYNNNNRTG	2 cut(s)	339, 546
SacI	GAGCTC	2 cut(s)	308, 838
SapI	GCTCTTC	2 cut(s)	170, 843
SaqAI	TTAA	2 cut(s)	510, 1238
SatI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1311
Sau3AI	GATC	3 cut(s)	312, 1281, 1303
Sau96I	GGNCC	3 cut(s)	76, 85, 603
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	1 cut(s)	681
ScrFI	CCNGG	3 cut(s)	669, 726, 761
SduI	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
SfaNI	GCATC	2 cut(s)	164, 1198
SfcI	CTRYAG	1 cut(s)	738
SfuI	TTCGAA	1 cut(s)	173
SinI	GGWCC	3 cut(s)	76, 85, 603
SmiMI	CAYNNNNRTG	2 cut(s)	339, 546
SseBI	AGGCCT	1 cut(s)	954
SsiI	CCGC	2 cut(s)	52, 1153
SspMI	CTAG	6 cut(s)	428, 627, 932, 944, 1232, 1268
SstI	GAGCTC	2 cut(s)	308, 838
StuI	AGGCCT	1 cut(s)	954
StyD4I	CCNGG	3 cut(s)	667, 724, 759
StyI	CCWWGG	3 cut(s)	595, 789, 1015
TaaI	ACNGT	3 cut(s)	464, 782, 1103
TaiI	ACGT	1 cut(s)	138
TaqI	TCGA	3 cut(s)	173, 279, 849
TatI	WGTACW	2 cut(s)	1022, 1339
TfiI	GAWTC	1 cut(s)	718
Tru1I	TTAA	2 cut(s)	510, 1238
Tru9I	TTAA	2 cut(s)	510, 1238
TscAI	CASTG	6 cut(s)	243, 256, 324, 787, 866, 1108
TseFI	GTSAC	3 cut(s)	673, 976, 1010
TseI	GCWGC	5 cut(s)	503, 737, 968, 1055, 1310
Tsp45I	GTSAC	3 cut(s)	673, 976, 1010
TspDTI	ATGAA	1 cut(s)	562
TspGWI	ACGGA	1 cut(s)	639
TspRI	CASTG	6 cut(s)	243, 256, 324, 787, 866, 1108
Tth111I	GACNNNGTC	1 cut(s)	1103
Van91I	CCANNNNNTGG	1 cut(s)	947
VneI	GTGCAC	1 cut(s)	1035
VpaK11BI	GGWCC	3 cut(s)	76, 85, 603
XapI	RAATTY	2 cut(s)	512, 1354
XceI	RCATGY	1 cut(s)	1215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XmiI	GTMKAC	1 cut(s)	402
XspI	CTAG	6 cut(s)	428, 627, 932, 944, 1232, 1268
ZrmI	AGTACT	1 cut(s)	1024
Zsp2I	ATGCAT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.