Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

50740628 .. 50743228

Gene Structure 2601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019356

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGACTTCTCTCCAGCTCCTAAACCCCCCAGTTTTCGCGGGAAAACGAAGCCCCCGCGTATGGACCACTGCGGTGACGCCACGTGGGTCTCTTAACGTGGACGTGCGCTCACGGGATCAAAAGGAGCCGGCGCCGGCGGCCCCGGCGGTGGGGAGCCAGGAGGTGATGGAGGCGGAGAAGAGGGTTATGGTGGGGACGTACAATAGACCACCAGTGGTGATCGCCAGTGGCAAAGGATGTAAATTGTACGATCCTGAAGGGCGAGAGTATTTGGACTTGATGTCTGGGATTGCTGTCAATGCGCTTGGACATGGGGATCCGGATTGGATACGGGCCGTTACAGAGCAAGCCCATGTGCTCACCCATGTCAGCAATGTCTACTATTCCATTCCTCAGGTGGAGCTGGCAAAACAGCTAGTGGCTTGCTCCTTTGCTGACCGTGTCTTTTTCACAAACTCTGGAACTGAAGCGAATGAAGCTGCCATAAAATTTGCAAGAAAGTTCCAAAGATTTTCAAACCCTGAGAAGAAAGAGCCTGTAACAGAATTCATTTCTTTCACTAACAGCTTCCATGGGAGGACGATGGGGTCCGTGGCTTTGACTAGTAAAGAGAATTACCGATCACCATTTGAGCCTCTCATGCCTGGAGTCACTTTCTTAGATTATGGAAATGTACAATCTGCAAGAAAGCTAATTAAATCTGGCAAAATCGCTGCTGTGTTTGTTGAACCTATCCAGGGTGAAGGTGGGATAAATAGTGCAACTAAAGAATTTTTGCAATCCTTGCGTGGTGCTTGTGATGATTCAGGTTCTCTTCTGGTCTTTGATGAGGTTCAATGTGGGTTGGGTCGAACTGGTTATCTCTGGGCGCATGAAGCTTACGGTGTATTCCCAGATATAATGACTCTGGCCAAGCCTCTTGCAGGAGGACTTCCCATAGGAGCTGTATTAGTGACTGAAAAGGTTGCTGCTTCAATGAAGTACGGAGAACATGGAAGCACTTTTGCTGGGGGGCCCCTTATCTGCAATGCTGCCCTTGCAGTCTTGGACAAAATTTCCAAGCCTGAGTTTCTCAGAAGCGTCTCAGAGAAAGGTCAGTACTTCAAAGAAGTGCTGACAAAGAAGCTGGGCACAAATCCACATGTGAGAGAAGTACGGGGTTTGGGGCTCATTGTTGGAGTAGAGCTGGACGTATCTGCTTCACCGCTTGTGGATGCCTGTAGGAATTCTGGTCTTCTGATAATAACAGCTGGAAAAGGAAATGTCCTCAGACTTGTGCCGCCGTTGATCATCTCTAAGCCAGAATTGGAGCATGCAGCTGAGATTTTGCTTGAATGTTTGCCTGCCCTTCATGGCTCTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003992 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016053 GO:0016740 GO:0016769 GO:0019752 GO:0019842 GO:0022622 GO:0030170 GO:0032501 GO:0032502 GO:0036094 GO:0042742 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044419 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048037 GO:0048364 GO:0048731 GO:0048856 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0070279 GO:0071704 GO:0080022 GO:0097159 GO:0098542 GO:0099402 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

455

Amino Acids

48.89

Weight (kDa)

8.07

Isoelectric Point (pI)

34.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	69 - 447	3.8e-116	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	586
AccB1I	GGYRCC	1 cut(s)	130
AccI	GTMKAC	1 cut(s)	378
AccII	CGCG	2 cut(s)	38, 57
AccIII	TCCGGA	1 cut(s)	319
AciI	CCGC	8 cut(s)	38, 55, 71, 137, 146, 173, 1205, 1280
AclWI	GGATC	4 cut(s)	123, 245, 311, 324
AcoI	YGGCCR	1 cut(s)	909
AcsI	RAATTY	5 cut(s)	488, 545, 770, 1053, 1225
AcuI	CTGAAG	2 cut(s)	276, 486
AcvI	CACGTG	1 cut(s)	83
AcyI	GRCGYC	2 cut(s)	77, 131
AfaI	GTAC	6 cut(s)	200, 248, 675, 983, 1100, 1155
AfiI	CCNNNNNNNGG	5 cut(s)	60, 148, 149, 737, 923
AflIII	ACRYGT	1 cut(s)	1141
AgsI	TTSAA	6 cut(s)	516, 728, 836, 975, 1105, 1334
AhdI	GACNNNNNGTC	1 cut(s)	280
AhlI	ACTAGT	1 cut(s)	602
AjiI	CACGTC	1 cut(s)	103
AjnI	CCWGG	3 cut(s)	156, 643, 735
AleI	CACNNNNGTG	1 cut(s)	71
Alw21I	GWGCWC	1 cut(s)	360
Alw26I	GTCTC	2 cut(s)	93, 1087
AlwI	GGATC	4 cut(s)	123, 245, 311, 324
Aor13HI	TCCGGA	1 cut(s)	319
AoxI	GGCC	4 cut(s)	138, 333, 909, 1013
ApaI	GGGCCC	1 cut(s)	1017
ApeKI	GCWGC	5 cut(s)	479, 713, 968, 1031, 1316
ApoI	RAATTY	5 cut(s)	488, 545, 770, 1053, 1225
AspLEI	GCGC	4 cut(s)	108, 133, 304, 871
AspS9I	GGNCC	6 cut(s)	63, 139, 333, 588, 1013, 1014
AsuC2I	CCSGG	1 cut(s)	143
AsuHPI	GGTGA	7 cut(s)	85, 175, 229, 352, 615, 752, 1194
AvaII	GGWCC	2 cut(s)	63, 588
AxyI	CCTNAGG	1 cut(s)	393
BaeGI	GKGCMC	2 cut(s)	1017, 1133
BalI	TGGCCA	1 cut(s)	911
BamHI	GGATCC	1 cut(s)	316
BanI	GGYRCC	1 cut(s)	130
BanII	GRGCYC	2 cut(s)	1017, 1170
BbrPI	CACGTG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	1226
Bbv12I	GWGCWC	1 cut(s)	360
BbvI	GCAGC	5 cut(s)	466, 700, 955, 1018, 1328
BccI	CCATC	2 cut(s)	160, 577
BceAI	ACGGC	2 cut(s)	320, 1267
BciT130I	CCWGG	3 cut(s)	158, 645, 737
BciVI	GTATCC	1 cut(s)	321
BclI	TGATCA	1 cut(s)	1287
BcnI	CCSGG	1 cut(s)	143
BcoDI	GTCTC	2 cut(s)	93, 1087
BcuI	ACTAGT	1 cut(s)	602
BfaI	CTAG	2 cut(s)	416, 603
BfmI	CTRYAG	1 cut(s)	1219
BfoI	RGCGCY	1 cut(s)	134
BfuI	GTATCC	1 cut(s)	321
BisI	GCNGC	7 cut(s)	138, 480, 714, 969, 1032, 1280, 1317
BlsI	GCNGC	7 cut(s)	139, 481, 715, 970, 1033, 1281, 1318
BmcAI	AGTACT	1 cut(s)	1100
Bme1390I	CCNGG	4 cut(s)	143, 158, 645, 737
Bme18I	GGWCC	2 cut(s)	63, 588
BmeRI	GACNNNNNGTC	1 cut(s)	280
BmgBI	CACGTC	1 cut(s)	103
BmgT120I	GGNCC	6 cut(s)	63, 139, 333, 588, 1013, 1014
BmiI	GGNNCC	9 cut(s)	126, 132, 141, 155, 318, 589, 1014, 1015, 1016
BmrFI	CCNGG	4 cut(s)	143, 158, 645, 737
BmrI	ACTGGG	1 cut(s)	23
BmsI	GCATC	1 cut(s)	1204
BmuI	ACTGGG	1 cut(s)	23
BpiI	GAAGAC	1 cut(s)	1226
BpmI	CTGGAG	1 cut(s)	666
BpuMI	CCSGG	1 cut(s)	143
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	2 cut(s)	77, 131
BsaI	GGTCTC	1 cut(s)	93
BsaJI	CCNNGG	4 cut(s)	141, 571, 591, 736
BsaWI	WCCGGW	1 cut(s)	319
Bsc4I	CCNNNNNNNGG	5 cut(s)	60, 148, 149, 737, 923
Bse118I	RCCGGY	2 cut(s)	127, 133
Bse1I	ACTGG	4 cut(s)	29, 212, 225, 859
Bse21I	CCTNAGG	1 cut(s)	393
Bse3DI	GCAATG	2 cut(s)	379, 1033
BseAI	TCCGGA	1 cut(s)	319
BseBI	CCWGG	3 cut(s)	158, 645, 737
BseDI	CCNNGG	4 cut(s)	141, 571, 591, 736
BseGI	GGATG	2 cut(s)	242, 1219
BseLI	CCNNNNNNNGG	5 cut(s)	60, 148, 149, 737, 923
BseMI	GCAATG	2 cut(s)	379, 1033
BseMII	CTCAG	7 cut(s)	407, 513, 1056, 1087, 1098, 1282, 1311
BseNI	ACTGG	4 cut(s)	29, 212, 225, 859
BseSI	GKGCMC	2 cut(s)	1017, 1133
BseXI	GCAGC	5 cut(s)	466, 700, 955, 1018, 1328
BseYI	CCCAGC	2 cut(s)	1007, 1126
Bsh1236I	CGCG	2 cut(s)	38, 57
BshFI	GGCC	4 cut(s)	140, 335, 911, 1015
BshNI	GGYRCC	1 cut(s)	130
BsiHKAI	GWGCWC	1 cut(s)	360
BsiSI	CCGG	4 cut(s)	128, 134, 143, 320
BslFI	GGGAC	1 cut(s)	208
BslI	CCNNNNNNNGG	5 cut(s)	60, 148, 149, 737, 923
BsmAI	GTCTC	2 cut(s)	93, 1087
BsmBI	CGTCTC	1 cut(s)	1087
BsmFI	GGGAC	1 cut(s)	208
BsnI	GGCC	4 cut(s)	140, 335, 911, 1015
Bso31I	GGTCTC	1 cut(s)	93
Bsp120I	GGGCCC	1 cut(s)	1013
Bsp1286I	GDGCHC	4 cut(s)	360, 1017, 1133, 1170
Bsp13I	TCCGGA	1 cut(s)	319
Bsp1407I	TGTACA	1 cut(s)	673
Bsp143I	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
Bsp19I	CCATGG	1 cut(s)	571
BspACI	CCGC	8 cut(s)	38, 55, 71, 137, 146, 173, 1205, 1280
BspANI	GGCC	4 cut(s)	140, 335, 911, 1015
BspCNI	CTCAG	7 cut(s)	406, 514, 1057, 1086, 1097, 1281, 1312
BspEI	TCCGGA	1 cut(s)	319
BspFNI	CGCG	2 cut(s)	38, 57
BspLI	GGNNCC	9 cut(s)	126, 132, 141, 155, 318, 589, 1014, 1015, 1016
BspPI	GGATC	4 cut(s)	123, 245, 311, 324
BspT107I	GGYRCC	1 cut(s)	130
BspTNI	GGTCTC	1 cut(s)	93
BsrDI	GCAATG	2 cut(s)	379, 1033
BsrFI	RCCGGY	2 cut(s)	127, 133
BsrGI	TGTACA	1 cut(s)	673
BsrI	ACTGG	4 cut(s)	29, 212, 225, 859
BssAI	RCCGGY	2 cut(s)	127, 133
BssECI	CCNNGG	4 cut(s)	141, 571, 591, 736
BssMI	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
BssNI	GRCGYC	2 cut(s)	77, 131
BssT1I	CCWWGG	1 cut(s)	571
Bst2UI	CCWGG	3 cut(s)	158, 645, 737
Bst4CI	ACNGT	2 cut(s)	440, 884
Bst6I	CTCTTC	2 cut(s)	173, 819
BstACI	GRCGYC	2 cut(s)	77, 131
BstAPI	GCANNNNNTGC	1 cut(s)	784
BstAUI	TGTACA	1 cut(s)	673
BstBAI	YACGTR	1 cut(s)	83
BstC8I	GCNNGC	7 cut(s)	129, 135, 348, 405, 424, 1314, 1344
BstDEI	CTNAG	9 cut(s)	393, 522, 658, 1065, 1073, 1084, 1268, 1296, 1320
BstDSI	CCRYGG	2 cut(s)	571, 591
BstENI	CCTNNNNNAGG	1 cut(s)	921
BstF5I	GGATG	2 cut(s)	242, 1219
BstFNI	CGCG	2 cut(s)	38, 57
BstH2I	RGCGCY	1 cut(s)	134
BstHHI	GCGC	4 cut(s)	108, 133, 304, 871
BstKTI	GATC	6 cut(s)	118, 222, 253, 319, 623, 1290
BstMAI	GTCTC	2 cut(s)	93, 1087
BstMBI	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
BstMWI	GCNNNNNNNGC	8 cut(s)	137, 143, 299, 476, 640, 784, 875, 1037
BstNI	CCWGG	3 cut(s)	158, 645, 737
BstNSI	RCATGY	2 cut(s)	1145, 1316
BstSCI	CCNGG	4 cut(s)	141, 156, 643, 735
BstSFI	CTRYAG	1 cut(s)	1219
BstSLI	GKGCMC	2 cut(s)	1017, 1133
BstUI	CGCG	2 cut(s)	38, 57
BstV1I	GCAGC	5 cut(s)	466, 700, 955, 1018, 1328
BstV2I	GAAGAC	1 cut(s)	1226
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
Bsu36I	CCTNAGG	1 cut(s)	393
BsuI	GTATCC	1 cut(s)	321
BsuRI	GGCC	4 cut(s)	140, 335, 911, 1015
BtgI	CCRYGG	2 cut(s)	571, 591
BtrI	CACGTC	1 cut(s)	103
BtsCI	GGATG	2 cut(s)	242, 1219
BtsI	GCAGTG	1 cut(s)	66
BtsIMutI	CAGTG	3 cut(s)	66, 219, 232
Cac8I	GCNNGC	7 cut(s)	129, 135, 348, 405, 424, 1314, 1344
CfoI	GCGC	4 cut(s)	108, 133, 304, 871
Cfr10I	RCCGGY	2 cut(s)	127, 133
Cfr13I	GGNCC	6 cut(s)	63, 139, 333, 588, 1013, 1014
CseI	GACGC	2 cut(s)	85, 1069
Csp6I	GTAC	6 cut(s)	199, 247, 674, 982, 1099, 1154
CviQI	GTAC	6 cut(s)	199, 247, 674, 982, 1099, 1154
DdeI	CTNAG	9 cut(s)	393, 522, 658, 1065, 1073, 1084, 1268, 1296, 1320
DinI	GGCGCC	1 cut(s)	132
DpnI	GATC	6 cut(s)	117, 221, 252, 318, 622, 1289
DpnII	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
DrdI	GACNNNNNNGTC	1 cut(s)	586
DriI	GACNNNNNGTC	1 cut(s)	280
DseDI	GACNNNNNNGTC	1 cut(s)	586
EaeI	YGGCCR	1 cut(s)	909
Eam1104I	CTCTTC	2 cut(s)	173, 819
Eam1105I	GACNNNNNGTC	1 cut(s)	280
EarI	CTCTTC	2 cut(s)	173, 819
EciI	GGCGGA	1 cut(s)	188
Eco130I	CCWWGG	1 cut(s)	571
Eco24I	GRGCYC	2 cut(s)	1017, 1170
Eco31I	GGTCTC	1 cut(s)	93
Eco47I	GGWCC	2 cut(s)	63, 588
Eco57I	CTGAAG	2 cut(s)	276, 486
Eco72I	CACGTG	1 cut(s)	83
Eco81I	CCTNAGG	1 cut(s)	393
EcoNI	CCTNNNNNAGG	1 cut(s)	921
EcoO109I	RGGNCCY	2 cut(s)	1013, 1014
EcoRI	GAATTC	2 cut(s)	545, 1225
EcoRII	CCWGG	3 cut(s)	156, 643, 735
EcoT14I	CCWWGG	1 cut(s)	571
EcoT38I	GRGCYC	2 cut(s)	1017, 1170
EgeI	GGCGCC	1 cut(s)	132
EheI	GGCGCC	1 cut(s)	132
ErhI	CCWWGG	1 cut(s)	571
Esp3I	CGTCTC	1 cut(s)	1087
FaqI	GGGAC	1 cut(s)	208
FauI	CCCGC	2 cut(s)	31, 62
FbaI	TGATCA	1 cut(s)	1287
FblI	GTMKAC	1 cut(s)	378
Fnu4HI	GCNGC	7 cut(s)	138, 480, 714, 969, 1032, 1280, 1317
FokI	GGATG	2 cut(s)	249, 1226
FriOI	GRGCYC	2 cut(s)	1017, 1170
Fsp4HI	GCNGC	7 cut(s)	138, 480, 714, 969, 1032, 1280, 1317
FspBI	CTAG	2 cut(s)	416, 603
GlaI	GCGC	4 cut(s)	107, 132, 303, 870
GluI	GCNGC	7 cut(s)	138, 480, 714, 969, 1032, 1280, 1317
GsaI	CCCAGC	2 cut(s)	1011, 1130
GsuI	CTGGAG	1 cut(s)	666
HaeII	RGCGCY	1 cut(s)	134
HaeIII	GGCC	4 cut(s)	140, 335, 911, 1015
HapII	CCGG	4 cut(s)	128, 134, 143, 320
HgaI	GACGC	2 cut(s)	85, 1069
HhaI	GCGC	4 cut(s)	108, 133, 304, 871
Hin1I	GRCGYC	2 cut(s)	77, 131
Hin6I	GCGC	4 cut(s)	106, 131, 302, 869
HinP1I	GCGC	4 cut(s)	106, 131, 302, 869
HindIII	AAGCTT	1 cut(s)	876
HinfI	GANTC	3 cut(s)	648, 803, 904
HpaII	CCGG	4 cut(s)	128, 134, 143, 320
HphI	GGTGA	7 cut(s)	85, 175, 229, 352, 615, 752, 1194
Hpy166II	GTNNAC	2 cut(s)	100, 379
Hpy188I	TCNGA	4 cut(s)	1076, 1087, 1239, 1271
Hpy188III	TCNNGA	3 cut(s)	254, 320, 459
Hpy8I	GTNNAC	2 cut(s)	100, 379
HpyAV	CCTTC	3 cut(s)	251, 737, 1358
HpyCH4III	ACNGT	2 cut(s)	440, 884
HpyCH4IV	ACGT	5 cut(s)	82, 96, 102, 197, 1191
HpyCH4V	TGCA	8 cut(s)	494, 683, 761, 778, 923, 1026, 1040, 1316
HpyF10VI	GCNNNNNNNGC	8 cut(s)	137, 143, 299, 476, 640, 784, 875, 1037
HpyF3I	CTNAG	9 cut(s)	393, 522, 658, 1065, 1073, 1084, 1268, 1296, 1320
HpySE526I	ACGT	5 cut(s)	82, 96, 102, 197, 1191
Hsp92I	GRCGYC	2 cut(s)	77, 131
HspAI	GCGC	4 cut(s)	106, 131, 302, 869
KasI	GGCGCC	1 cut(s)	130
Kpn2I	TCCGGA	1 cut(s)	319
KroI	GCCGGC	2 cut(s)	127, 133
KroNI	GCCGGC	2 cut(s)	129, 135
Ksp22I	TGATCA	1 cut(s)	1287
Kzo9I	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
LmnI	GCTCC	7 cut(s)	21, 124, 153, 400, 431, 941, 1309
Lsp1109I	GCAGC	5 cut(s)	466, 700, 955, 1018, 1328
LweI	GCATC	1 cut(s)	1204
MaeI	CTAG	2 cut(s)	416, 603
MaeII	ACGT	5 cut(s)	82, 96, 102, 197, 1191
MaeIII	GTNAC	5 cut(s)	73, 337, 538, 649, 952
MalI	GATC	6 cut(s)	117, 221, 252, 318, 622, 1289
MboI	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
MboII	GAAGA	4 cut(s)	190, 538, 806, 1226
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	4 cut(s)	360, 1017, 1133, 1170
MlsI	TGGCCA	1 cut(s)	911
MluCI	AATT	9 cut(s)	242, 488, 545, 613, 693, 770, 1053, 1225, 1304
MluNI	TGGCCA	1 cut(s)	911
Mly113I	GGCGCC	1 cut(s)	131
MlyI	GAGTC	2 cut(s)	657, 898
MmeI	TCCRAC	1 cut(s)	1156
Mox20I	TGGCCA	1 cut(s)	911
MreI	CGCCGGCG	1 cut(s)	133
MroI	TCCGGA	1 cut(s)	319
MroNI	GCCGGC	2 cut(s)	127, 133
MscI	TGGCCA	1 cut(s)	911
MseI	TTAA	2 cut(s)	93, 696
MslI	CAYNNNNRTG	1 cut(s)	71
Msp20I	TGGCCA	1 cut(s)	911
MspA1I	CMGCKG	2 cut(s)	1250, 1319
MspI	CCGG	4 cut(s)	128, 134, 143, 320
MspR9I	CCNGG	4 cut(s)	143, 158, 645, 737
MvaI	CCWGG	3 cut(s)	158, 645, 737
MvnI	CGCG	2 cut(s)	38, 57
MwoI	GCNNNNNNNGC	8 cut(s)	137, 143, 299, 476, 640, 784, 875, 1037
NaeI	GCCGGC	2 cut(s)	129, 135
NarI	GGCGCC	1 cut(s)	131
NciI	CCSGG	1 cut(s)	143
NcoI	CCATGG	1 cut(s)	571
NdeII	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
NgoMIV	GCCGGC	2 cut(s)	127, 133
NlaIV	GGNNCC	9 cut(s)	126, 132, 141, 155, 318, 589, 1014, 1015, 1016
NmuCI	GTSAC	3 cut(s)	73, 649, 952
NspI	RCATGY	2 cut(s)	1145, 1316
OliI	CACNNNNGTG	1 cut(s)	71
PaeI	GCATGC	1 cut(s)	1316
PciI	ACATGT	1 cut(s)	1141
PdiI	GCCGGC	2 cut(s)	129, 135
PfeI	GAWTC	1 cut(s)	803
PflFI	GACNNNGTC	1 cut(s)	440
PkrI	GCNGC	7 cut(s)	139, 481, 715, 970, 1033, 1281, 1318
PleI	GAGTC	2 cut(s)	656, 898
PluTI	GGCGCC	1 cut(s)	134
PmaCI	CACGTG	1 cut(s)	83
PmlI	CACGTG	1 cut(s)	83
PpsI	GAGTC	2 cut(s)	656, 898
Ppu21I	YACGTR	1 cut(s)	83
PscI	ACATGT	1 cut(s)	1141
Psp6I	CCWGG	3 cut(s)	156, 643, 735
PspCI	CACGTG	1 cut(s)	83
PspFI	CCCAGC	2 cut(s)	1007, 1126
PspGI	CCWGG	3 cut(s)	156, 643, 735
PspN4I	GGNNCC	9 cut(s)	126, 132, 141, 155, 318, 589, 1014, 1015, 1016
PspOMI	GGGCCC	1 cut(s)	1013
PspPI	GGNCC	6 cut(s)	63, 139, 333, 588, 1013, 1014
PsuI	RGATCY	1 cut(s)	316
PsyI	GACNNNGTC	1 cut(s)	440
PvuII	CAGCTG	2 cut(s)	1250, 1319
RsaI	GTAC	6 cut(s)	200, 248, 675, 983, 1100, 1155
RsaNI	GTAC	6 cut(s)	199, 247, 674, 982, 1099, 1154
RseI	CAYNNNNRTG	1 cut(s)	71
SaqAI	TTAA	2 cut(s)	93, 696
SatI	GCNGC	7 cut(s)	138, 480, 714, 969, 1032, 1280, 1317
Sau3AI	GATC	6 cut(s)	115, 219, 250, 316, 620, 1287
Sau96I	GGNCC	6 cut(s)	63, 139, 333, 588, 1013, 1014
ScaI	AGTACT	1 cut(s)	1100
SchI	GAGTC	2 cut(s)	657, 898
ScrFI	CCNGG	4 cut(s)	143, 158, 645, 737
SduI	GDGCHC	4 cut(s)	360, 1017, 1133, 1170
SfaNI	GCATC	1 cut(s)	1204
SfcI	CTRYAG	1 cut(s)	1219
SfoI	GGCGCC	1 cut(s)	132
SgrAI	CRCCGGYG	1 cut(s)	133
SinI	GGWCC	2 cut(s)	63, 588
SmiMI	CAYNNNNRTG	1 cut(s)	71
SpeI	ACTAGT	1 cut(s)	602
SphI	GCATGC	1 cut(s)	1316
Sse9I	AATT	9 cut(s)	242, 488, 545, 613, 693, 770, 1053, 1225, 1304
SsiI	CCGC	8 cut(s)	38, 55, 71, 137, 146, 173, 1205, 1280
SspDI	GGCGCC	1 cut(s)	130
SspMI	CTAG	2 cut(s)	416, 603
StyD4I	CCNGG	4 cut(s)	141, 156, 643, 735
StyI	CCWWGG	1 cut(s)	571
TaaI	ACNGT	2 cut(s)	440, 884
TaiI	ACGT	5 cut(s)	85, 99, 105, 200, 1194
TaqI	TCGA	1 cut(s)	850
TasI	AATT	9 cut(s)	242, 488, 545, 613, 693, 770, 1053, 1225, 1304
TatI	WGTACW	2 cut(s)	673, 1098
TauI	GCSGC	2 cut(s)	140, 1282
TfiI	GAWTC	1 cut(s)	803
Tru1I	TTAA	2 cut(s)	93, 696
Tru9I	TTAA	2 cut(s)	93, 696
TscAI	CASTG	3 cut(s)	73, 219, 232
TseFI	GTSAC	3 cut(s)	73, 649, 952
TseI	GCWGC	5 cut(s)	479, 713, 968, 1031, 1316
Tsp45I	GTSAC	3 cut(s)	73, 649, 952
TspDTI	ATGAA	5 cut(s)	489, 538, 888, 992, 1340
TspGWI	ACGGA	2 cut(s)	580, 999
TspRI	CASTG	3 cut(s)	73, 219, 232
Tth111I	GACNNNGTC	1 cut(s)	440
VpaK11BI	GGWCC	2 cut(s)	63, 588
XagI	CCTNNNNNAGG	1 cut(s)	921
XapI	RAATTY	5 cut(s)	488, 545, 770, 1053, 1225
XceI	RCATGY	2 cut(s)	1145, 1316
XcmI	CCANNNNNNNNNTGG	2 cut(s)	394, 743
XmiI	GTMKAC	1 cut(s)	378
XspI	CTAG	2 cut(s)	416, 603
ZrmI	AGTACT	1 cut(s)	1100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.